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  • Can't connect to SSL web service with WS-Security using PHP SOAP extension - certificate, complex WSDL

    - by BillF
    Using the PHP5 SOAP extension I have been unable to connect to a web service having an https endpoint, with client certificate and using WS-Security, although I can connect using soapUI with the exact same wsdl and client certificate, and obtain the normal response to the request. There is no HTTP authentication and no proxy is involved. The message I get is 'Could not connect to host'. Have been able to verify that I am NOT hitting the host server. (Earlier I wrongly said that I was hitting the server.) The self-signed client SSL certificate is a .pem file converted by openssl from a .p12 keystore which in turn was converted by keytool from a .jks keystore having a single entry consisting of private key and client certificate. In soapUI I did not need to supply a server private certificate, the only two files I gave it were the wdsl and pem. I did have to supply the pem and its passphrase to be able to connect. I am speculating that despite the error message my problem might actually be in the formation of the XML request rather than the SSL connection itself. The wsdl I have been given has nested complex types. The php server is on my Windows XP laptop with IIS. The code, data values and WSDL extracts are shown below. (The WSSoapClient class simply extends SoapClient, adding a WS-Security Username Token header with mustUnderstand = true and including a nonce, both of which the soapUI call had required.) Would so much appreciate any help. I'm a newbie thrown in at the deep end, and how! Have done vast amounts of Googling on this over many days, following many suggestions and have read Pro PHP by Kevin McArthur. An attempt to use classmaps in place of nested arrays also fell flat. The Code class STEeService { public function invokeWebService(array $connection, $operation, array $request) { try { $localCertificateFilespec = $connection['localCertificateFilespec']; $localCertificatePassphrase = $connection['localCertificatePassphrase']; $sslOptions = array( 'ssl' => array( 'local_cert' => $localCertificateFilespec, 'passphrase' => $localCertificatePassphrase, 'allow_self-signed' => true, 'verify_peer' => false ) ); $sslContext = stream_context_create($sslOptions); $clientArguments = array( 'stream_context' => $sslContext, 'local_cert' => $localCertificateFilespec, 'passphrase' => $localCertificatePassphrase, 'trace' => true, 'exceptions' => true, 'encoding' => 'UTF-8', 'soap_version' => SOAP_1_1 ); $oClient = new WSSoapClient($connection['wsdlFilespec'], $clientArguments); $oClient->__setUsernameToken($connection['username'], $connection['password']); return $oClient->__soapCall($operation, $request); } catch (exception $e) { throw new Exception("Exception in eServices " . $operation . " ," . $e->getMessage(), "\n"); } } } $connection is as follows: array(5) { ["username"]=> string(8) "DFU00050" ["password"]=> string(10) "Fabricate1" ["wsdlFilespec"]=> string (63) "c:/inetpub/wwwroot/DMZExternalService_Concrete_WSDL_Staging.xml" ["localCertificateFilespec"]=> string(37) "c:/inetpub/wwwroot/ClientKeystore.pem" ["localCertificatePassphrase"]=> string(14) "password123456" } $clientArguments is as follows: array(7) { ["stream_context"]=> resource(8) of type (stream-context) ["local_cert"]=> string(37) "c:/inetpub/wwwroot/ClientKeystore.pem" ["passphrase"]=> string(14) "password123456" ["trace"]=> bool(true) ["exceptions"]=> bool(true) ["encoding"]=> string(5) "UTF-8" ["soap_version"]=> int(1) } $operation is as follows: 'getConsignmentDetails' $request is as follows: array(1) { [0]=> array(2) { ["header"]=> array(2) { ["source"]=> string(9) "customerA" ["accountNo"]=> string(8) "10072906" } ["consignmentId"]=> string(11) "GKQ00000085" } } Note how there is an extra level of nesting, an array wrapping the request which is itself an array. This was suggested in a post although I don't see the reason, but it seems to help avoid other exceptions. The exception thrown by ___soapCall is as follows: object(SoapFault)#6 (9) { ["message":protected]=> string(25) "Could not connect to host" ["string":"Exception":private]=> string(0) "" ["code":protected]=> int(0) ["file":protected]=> string(43) "C:\Inetpub\wwwroot\eServices\WSSecurity.php" ["line":protected]=> int(85) ["trace":"Exception":private]=> array(5) { [0]=> array(6) { ["file"]=> string(43) "C:\Inetpub\wwwroot\eServices\WSSecurity.php" ["line"]=> int(85) ["function"]=> string(11) "__doRequest" ["class"]=> string(10) "SoapClient" ["type"]=> string(2) "->" ["args"]=> array(4) { [0]=> string(1240) " DFU00050 Fabricate1 E0ByMUA= 2010-10-28T13:13:52Z customerA10072906GKQ00000085 " [1]=> string(127) "https://services.startrackexpress.com.au:7560/DMZExternalService/InterfaceServices/ExternalOps.serviceagent/OperationsEndpoint1" [2]=> string(104) "/DMZExternalService/InterfaceServices/ExternalOps.serviceagent/OperationsEndpoint1/getConsignmentDetails" [3]=> int(1) } } [1]=> array(4) { ["function"]=> string(11) "__doRequest" ["class"]=> string(39) "startrackexpress\eservices\WSSoapClient" ["type"]=> string(2) "->" ["args"]=> array(5) { [0]=> string(1240) " DFU00050 Fabricate1 E0ByMUA= 2010-10-28T13:13:52Z customerA10072906GKQ00000085 " [1]=> string(127) "https://services.startrackexpress.com.au:7560/DMZExternalService/InterfaceServices/ExternalOps.serviceagent/OperationsEndpoint1" [2]=> string(104) "/DMZExternalService/InterfaceServices/ExternalOps.serviceagent/OperationsEndpoint1/getConsignmentDetails" [3]=> int(1) [4]=> int(0) } } [2]=> array(6) { ["file"]=> string(43) "C:\Inetpub\wwwroot\eServices\WSSecurity.php" ["line"]=> int(70) ["function"]=> string(10) "__soapCall" ["class"]=> string(10) "SoapClient" ["type"]=> string(2) "->" ["args"]=> array(4) { [0]=> string(21) "getConsignmentDetails" [1]=> array(1) { [0]=> array(2) { ["header"]=> array(2) { ["source"]=> string(9) "customerA" ["accountNo"]=> string(8) "10072906" } ["consignmentId"]=> string(11) "GKQ00000085" } } [2]=> NULL [3]=> object(SoapHeader)#5 (4) { ["namespace"]=> string(81) "http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-secext-1.0.xsd" ["name"]=> string(8) "Security" ["data"]=> object(SoapVar)#4 (2) { ["enc_type"]=> int(147) ["enc_value"]=> string(594) " DFU00050 Fabricate1 E0ByMUA= 2010-10-28T13:13:52Z " } ["mustUnderstand"]=> bool(true) } } } [3]=> array(6) { ["file"]=> string(42) "C:\Inetpub\wwwroot\eServices\eServices.php" ["line"]=> int(87) ["function"]=> string(10) "__soapCall" ["class"]=> string(39) "startrackexpress\eservices\WSSoapClient" ["type"]=> string(2) "->" ["args"]=> array(2) { [0]=> string(21) "getConsignmentDetails" [1]=> array(1) { [0]=> array(2) { ["header"]=> array(2) { ["source"]=> string(9) "customerA" ["accountNo"]=> string(8) "10072906" } ["consignmentId"]=> string(11) "GKQ00000085" } } } } [4]=> array(6) { ["file"]=> string(58) "C:\Inetpub\wwwroot\eServices\EnquireConsignmentDetails.php" ["line"]=> int(44) ["function"]=> string(16) "invokeWebService" ["class"]=> string(38) "startrackexpress\eservices\STEeService" ["type"]=> string(2) "->" ["args"]=> array(3) { [0]=> array(5) { ["username"]=> string(10) "DFU00050 " ["password"]=> string(12) "Fabricate1 " ["wsdlFilespec"]=> string(63) "c:/inetpub/wwwroot/DMZExternalService_Concrete_WSDL_Staging.xml" ["localCertificateFilespec"]=> string(37) "c:/inetpub/wwwroot/ClientKeystore.pem" ["localCertificatePassphrase"]=> string(14) "password123456" } [1]=> string(21) "getConsignmentDetails" [2]=> array(1) { [0]=> array(2) { ["header"]=> array(2) { ["source"]=> string(9) "customerA" ["accountNo"]=> string(8) "10072906" } ["consignmentId"]=> string(11) "GKQ00000085" } } } } } ["previous":"Exception":private]=> NULL ["faultstring"]=> string(25) "Could not connect to host" ["faultcode"]=> string(4) "HTTP" } Here are some WSDL extracts (TIBCO BusinessWorks): <xsd:complexType name="TransactionHeaderType"> <xsd:sequence> <xsd:element name="source" type="xsd:string"/> <xsd:element name="accountNo" type="xsd:integer"/> <xsd:element name="userId" type="xsd:string" minOccurs="0"/> <xsd:element name="transactionId" type="xsd:string" minOccurs="0"/> <xsd:element name="transactionDatetime" type="xsd:dateTime" minOccurs="0"/> </xsd:sequence> </xsd:complexType> <xsd:element name="getConsignmentDetailRequest"> <xsd:complexType> <xsd:sequence> <xsd:element name="header" type="prim:TransactionHeaderType"/> <xsd:element name="consignmentId" type="prim:ID" maxOccurs="unbounded"/> </xsd:sequence> </xsd:complexType> </xsd:element> <xsd:element name="getConsignmentDetailResponse"> <xsd:complexType> <xsd:sequence> <xsd:element name="consignment" type="freight:consignmentType" minOccurs="0" maxOccurs="unbounded"/> </xsd:sequence> </xsd:complexType> </xsd:element> <xsd:element name="getConsignmentDetailRequest"> <xsd:complexType> <xsd:sequence> <xsd:element name="header" type="prim:TransactionHeaderType"/> <xsd:element name="consignmentId" type="prim:ID" maxOccurs="unbounded"/> </xsd:sequence> </xsd:complexType> </xsd:element> <xsd:element name="getConsignmentDetailResponse"> <xsd:complexType> <xsd:sequence> <xsd:element name="consignment" type="freight:consignmentType" minOccurs="0" maxOccurs="unbounded"/> </xsd:sequence> </xsd:complexType> </xsd:element> <wsdl:operation name="getConsignmentDetails"> <wsdl:input message="tns:getConsignmentDetailsRequest"/> <wsdl:output message="tns:getConsignmentDetailsResponse"/> <wsdl:fault name="fault1" message="tns:fault"/> </wsdl:operation> <wsdl:service name="ExternalOps"> <wsdl:port name="OperationsEndpoint1" binding="tns:OperationsEndpoint1Binding"> <soap:address location="https://services.startrackexpress.com.au:7560/DMZExternalService/InterfaceServices/ExternalOps.serviceagent/OperationsEndpoint1"/> </wsdl:port> </wsdl:service> And here in case it's relevant is the WSSoapClient class: <?PHP namespace startrackexpress\eservices; use SoapClient, SoapVar, SoapHeader; class WSSoapClient extends SoapClient { private $username; private $password; /*Generates a WS-Security header*/ private function wssecurity_header() { $timestamp = gmdate('Y-m-d\TH:i:s\Z'); $nonce = mt_rand(); $passdigest = base64_encode(pack('H*', sha1(pack('H*', $nonce).pack('a*', $timestamp).pack('a*', $this->password)))); $auth = ' <wsse:Security SOAP-ENV:mustUnderstand="1" xmlns:wsse="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-secext-1.0.xsd"> <wsse:UsernameToken> <wsse:Username>' . $this->username . '</wsse:Username> <wsse:Password Type="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-username-token-profile-1.0#PasswordText">' . $this->password . '</wsse:Password> <wsse:Nonce>' . base64_encode(pack('H*', $nonce)).'</wsse:Nonce> <wsu:Created xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">' . $timestamp . '</wsu:Created> </wsse:UsernameToken> </wsse:Security> '; $authvalues = new SoapVar($auth, XSD_ANYXML); $header = new SoapHeader("http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-secext-1.0.xsd", "Security",$authvalues, true); return $header; } // Sets a username and passphrase public function __setUsernameToken($username,$password) { $this->username=$username; $this->password=$password; } // Overwrites the original method, adding the security header public function __soapCall($function_name, $arguments, $options=null, $input_headers=null, $output_headers=null) { try { $result = parent::__soapCall($function_name, $arguments, $options, $this->wssecurity_header()); return $result; } catch (exception $e) { throw new Exception("Exception in __soapCall, " . $e->getMessage(), "\n"); } } } ?> Update: The request XML would have been as follows: <?xml version="1.0" encoding="UTF-8"?> <SOAP-ENV:Envelope xmlns:SOAP-ENV="http://schemas.xmlsoap.org/soap/envelope/" xmlns:ns1="http://startrackexpress/Common/Primitives/v1" xmlns:ns2="http://startrackexpress/Common/actions/externals/Consignment/v1" xmlns:ns3="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-secext-1.0.xsd"> <SOAP-ENV:Header> <wsse:Security SOAP-ENV:mustUnderstand="1" xmlns:wsse="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-secext-1.0.xsd"> <wsse:UsernameToken> <wsse:Username>DFU00050</wsse:Username> <wsse:Password Type="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-username-token-profile-1.0#PasswordText">Fabricate1</wsse:Password> <wsse:Nonce>M4FIeGA=</wsse:Nonce> <wsu:Created xmlns:wsu="http://docs.oasis-open.org/wss/2004/01/oasis-200401-wss-wssecurity-utility-1.0.xsd">2010-10-29T14:05:27Z</wsu:Created> </wsse:UsernameToken> </wsse:Security> </SOAP-ENV:Header> <SOAP-ENV:Body><ns2:getConsignmentDetailRequest> <ns2:header><ns1:source>customerA</ns1:source><ns1:accountNo>10072906</ns1:accountNo></ns2:header> <ns2:consignmentId>GKQ00000085</ns2:consignmentId> </ns2:getConsignmentDetailRequest></SOAP-ENV:Body> </SOAP-ENV:Envelope> This was obtained with the following code in WSSoapClient: public function __doRequest($request, $location, $action, $version) { echo "<p> " . htmlspecialchars($request) . " </p>" ; return parent::__doRequest($request, $location, $action, $version); }

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  • error C2109: subscript requires array or pointer type

    - by numerical25
    I am trying to debug some homework but I am having trouble with these lines of code #include "stdafx.h" #include<conio.h> #include<iostream> #include<string> using namespace std; int main() { char word; cout << "Enter a word and I will tell you whether it is" << endl << "in the first or last half of the alphabet." << endl << "Please begin the word with a lowercase letter. --> "; cin >> word; if(word[0] >= 'm') cout << word << " is in the first half of the alphabet" << endl; else cout << word << " is in the last half of the alphabet" << endl; return 0; } I get the following error and I have no clue what its sayings error C2109: subscript requires array or pointer type

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  • Map/Reduce on an array of hashes in CouchDB

    - by sebastiangeiger
    Hello everyone, I am looking for a map/reduce function to calculate the status in a Design Document. Below you can see an example document from my current database. { "_id": "0238f1414f2f95a47266ca43709a6591", "_rev": "22-24a741981b4de71f33cc70c7e5744442", "status": "retrieved image urls", "term": "Lucas Winter", "urls": [ { "status": "retrieved", "url": "http://...." }, { "status": "retrieved", "url": "http://..." } ], "search_depth": 1, "possible_labels": { "gender": "male" }, "couchrest-type": "SearchTerm" } I'd like to get rid of the status key and rather calculate it from the statuses of the urls. My current by_status view looks like the following: function(doc) { if (doc['status']) { emit(doc['status'], null); } } I tried some things but nothing actually works. Right now my Map Function looks like this: function(doc) { if(doc.urls){ emit(doc._id, doc.urls) } } And my Reduce Function function(key, value, rereduce){ var reduced_status = "retrieved" for(var url in value){ if(url.status=="new"){ reduced_status = "new"; } } return reduced_status; } The result is that I get retrieved everywhere which is definitely not right. I tried to narrow down the problem and it seems to be that value is no array, when I use the following Reduce Function I get length 1 everywhere, which is impossible because I have 12 documents in my database, each containing between 20 to 200 urls function(key, value, rereduce){ return value.length; } What am I doing wrong? (I know I want you to write code for me and I'm feeling guilty, but right now I do the calculation of the statuses in ruby after getting the data from the database. It would be nice to already get the right data from the database)

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  • flexible length struct array inside another struct using C

    - by renz
    Hi I am trying to use C to implement a simple struct: 2 boxes, each contains different number of particles; the exact number of particles are passed in main(). I wrote the following code: typedef struct Particle{ float x; float y; float vx; float vy; }Particle; typedef struct Box{ Particle p[]; }Box; void make_box(Box *box, int number_of_particles); int main(){ Box b1, b2; make_box(&b1, 5); //create a box containing 5 particles make_box(&b2, 10); //create a box containing 10 particles } I've tried to implement make_box with the following code void make_box(struct Box *box, int no_of_particles){ Particle po[no_of_particles]; po[0].x = 1; po[1].x = 2; //so on and so forth... box->p = po; } It's always giving me "invalid use of flexible array member". Greatly appreciated if someone can shed some light on this.

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  • Binding an ASP.NET GridView Control to a string array

    - by Michael Kniskern
    I am trying to bind an ASP.NET GridView control to an string array and I get the following item: A field or property with the name 'Item' was not found on the selected data source. What is correct value I should use for DataField property of the asp:BoundField column in my GridView control. Here is my source code: ASPX page <asp:GridView ID="MyGridView" runat="server" AutoGenerateColumns="false"> <Columns> <asp:BoundField DataField="Item" /> <asp:CommandField ButtonType="Link" ShowSelectButton="true" SelectText="Click Me!" /> </Columns> </asp:GridView> Code Behind: string[] MyArray = new string[1]; MyArray[0] = "My Value"; MyGridView.DataSource = MyArray; MyGridView.DataBind(); UPDATE I need to have the AutoGenerateColumns attribute set to false because I need to generate additional asp:CommandField columns. I have updated my code sample to reflect this scenarion

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  • Ascii Bytes Array To Int32 or Double

    - by Michael Covelli
    I'm re-writing alibrary with a mandate to make it totally allocation free. The goal is to have 0 collections after the app's startup phase is done. Previously, there were a lot of calls like this: Int32 foo = Int32.Parse(ASCIIEncoding.ASCII.GetString(bytes, start, length)); Which I believe is allocating a string. I couldn't find a C# library function that would do the same thing automatically. I looked at the BitConverter class, but it looks like that is only if your Int32 is encoded with the actual bytes that represent it. Here, I have an array of bytes representing Ascii characters that represent an Int32. Here's what I did public static Int32 AsciiBytesToInt32(byte[] bytes, int start, int length) { Int32 Temp = 0; Int32 Result = 0; Int32 j = 1; for (int i = start + length - 1; i >= start; i--) { Temp = ((Int32)bytes[i]) - 48; if (Temp < 0 || Temp > 9) { throw new Exception("Bytes In AsciiBytesToInt32 Are Not An Int32"); } Result += Temp * j; j *= 10; } return Result; } Does anyone know of a C# library function that already does this in a more optimal way? Or an improvement to make the above run faster (its going to be called millions of times during the day probably). Thanks!

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  • How should I map multidimensional to jagged arrays?

    - by mafutrct
    I'd like to map Foo[,] to Foo[][] and back. There are simple solutions using loops, but isn't there something more elegant? In my specific case, this is required in this scenario: [DataContract] class A { // can't serialize this thingy private readonly Foo[,] _Foo; [DataMember] private Foo[][] SerializableFoo { get { // map here } set { // map here } } } I'm aware there are advanced solutions using IDataContractSurrogate but this seems to be overkill in my case.

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  • error when plotting log'd array in matplotlib/scipy/numpy

    - by user248237
    I have two arrays and I take their logs. When I do that and try to plot their scatter plot, I get this error: File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/pyplot.py", line 2192, in scatter ret = ax.scatter(x, y, s, c, marker, cmap, norm, vmin, vmax, alpha, linewidths, faceted, verts, **kwargs) File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/axes.py", line 5384, in scatter self.add_collection(collection) File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/axes.py", line 1391, in add_collection self.update_datalim(collection.get_datalim(self.transData)) File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/collections.py", line 153, in get_datalim offsets = transOffset.transform_non_affine(offsets) File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/transforms.py", line 1924, in transform_non_affine self._a.transform(points)) File "/Library/Python/2.6/site-packages/matplotlib-1.0.svn_r7892-py2.6-macosx-10.6-universal.egg/matplotlib/transforms.py", line 1420, in transform return affine_transform(points, mtx) ValueError: Invalid vertices array. the code is simply: myarray_x = log(my_array[:, 0]) myarray_y = log(my_array[:, 1]) plt.scatter(myarray_x, myarray_y) any idea what could be causing this? thanks.

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  • Unable to access a primitive array inside a custom class from a UIViewController instance

    - by Daniel
    Hello! I have made a subclass of NSObject that is meant to be the model of my application. The class has a few methods and on instance primitive array as such: @interface Cube : NSObject { int cubeState[5][2][2]; } - (id)printContent; @end @implementation Cube - (void)init { if (self = [super init]) { for (int i=0; i<=5; i++) { for (int j=0; j<=2; j++) { for (int k=0; k<=2; k++) { cubeState[i][j][k] = i; } } } } return self; } - (void)printContent { for (int i=0; i<=5; i++) { for (int j=0; j<=2; j++) { for (int k=0; k<=2; k++) { NSLog(@"[%d] [%d] [%d] = %d", i, j, k, cubeState[i][j][k]); } } } } @end This works fine if instanciated from the delegate as such: #include "Cube.h" @implementation CubeAppDelegate @synthesize window; - (void)applicationDidFinishLaunching:(UIApplication *)application { Cube *cube = [[Cube alloc] init]; [cube printContent]; [cube release]; [window makeKeyAndVisible]; } However, the application crashes if I try to create a subclass of UIViewController with a Cube *cube property and later try to access the Cube instance object through the view controller's property as such: @interface CustomController : UIViewController { Cube *cube; } @property (nonatomic, retain) Cube *cube; @end @implementation CustomController @synthesize cube; - (void)dealloc { [cube release]; [super dealloc]; } @end and in the delegate: - (void)applicationDidFinishLaunching:(UIApplication *)application { viewController = [[CustomController alloc] initWithNibName:@"MainView" bundle:nil]; viewController.cube = [[[Cube alloc] init] autorelease]; [viewController.cube printContent]; // Application crashes here } Any ideas?

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  • Sorting arrays with cyclic compares (infinite loop?)

    - by Tiago
    Hi, I have some objects that have 3 sorting options: quality, quatity and a compare against the other object, sorted by that order. - (NSComparisonResult) compare: (MyObject *) obj { if (self.quality > obj.quality) return NSOrderedAscending; else if (self.quality < obj.quality) return NSOrderedDescending; if (self.quantity > obj.quantity) return NSOrderedAscending; else if (self.quantity < obj.quantity) return NSOrderedDescending; if ([self betterThan: obj]) return NSOrderedAscending; if ([obj betterThan: self]) return NSOrderedDescending; return NSOrderedSame; } My problem is that, the betterThan: method might cause a cyclic compare if the objects have the same quality and quantity, and I want to return any sort order in that case. For example, A, B and C have the same quality/quantity, but A betterThan: B => YES B betterThan: C => YES C betterThan: A => YES Solutions? Thanks.

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  • scipy.io typeerror:buffer too small for requested array

    - by kartiku
    I have a problem in python. I'm using scipy, where i use scipy.io to load a .mat file. The .mat file was created using MATLAB. listOfFiles = os.listdir(loadpathTrain) for f in listOfFiles: fullPath = loadpathTrain + '/' + f mat_contents = sio.loadmat(fullPath) print fullPath Here's the error: Traceback (most recent call last): File "tryRankNet.py", line 1112, in demo() File "tryRankNet.py", line 645, in demo mat_contents = sio.loadmat(fullPath) File "/usr/lib/python2.6/dist-packages/scipy/io/matlab/mio.py", line 111, in loadmat matfile_dict = MR.get_variables() File "/usr/lib/python2.6/dist-packages/scipy/io/matlab/miobase.py", line 356, in get_variables getter = self.matrix_getter_factory() File "/usr/lib/python2.6/dist-packages/scipy/io/matlab/mio5.py", line 602, in matrix_getter_factory return self._array_reader.matrix_getter_factory() File "/usr/lib/python2.6/dist-packages/scipy/io/matlab/mio5.py", line 274, in matrix_getter_factory tag = self.read_dtype(self.dtypes['tag_full']) File "/usr/lib/python2.6/dist-packages/scipy/io/matlab/miobase.py", line 171, in read_dtype order='F') TypeError: buffer is too small for requested array The whole thing is in a loop, and I checked the size of the file where it gives the error by loading it interactively in IDLE. The size is (9,521), which is not at all huge. I tried to find if I'm supposed to clear the buffer after each iteration of the loop, but I could not find anything. Any help would be appreciated. Thanks.

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  • Pythonic mapping of an array (Beginner)

    - by scott_karana
    Hey StackOverflow, I've got a question related to a beginner Python snippet I've written to introduce myself to the language. It's an admittedly trivial early effort, but I'm still wondering how I could have written it more elegantly. The program outputs NATO phoenetic readable versions of an argument, such "H2O" - "Hotel 2 Oscar", or (lacking an argument) just outputs the whole alphabet. I mainly use it for calling in MAC addresses and IQNs, but it's useful for other phone support too. Here's the body of the relevant portion of the program: #!/usr/bin/env python import sys nato = { "a": 'Alfa', "b": 'Bravo', "c": 'Charlie', "d": 'Delta', "e": 'Echo', "f": 'Foxtrot', "g": 'Golf', "h": 'Hotel', "i": 'India', "j": 'Juliet', "k": 'Kilo', "l": 'Lima', "m": 'Mike', "n": 'November', "o": 'Oscar', "p": 'Papa', "q": 'Quebec', "r": 'Romeo', "s": 'Sierra', "t": 'Tango', "u": 'Uniform', "v": 'Victor', "w": 'Whiskey', "x": 'Xray', "y": 'Yankee', "z": 'Zulu', } if len(sys.argv) < 2: for n in nato.keys(): print nato[n] else: # if sys.argv[1] == "-i" # TODO for char in sys.argv[1].lower(): if char in nato: print nato[char], else: print char, As I mentioned, I just want to see suggestions for a more elegant way to code this. My first guess was to use a list comprehension along the lines of [nato[x] for x in sys.argv[1].lower() if x in nato], but that doesn't allow me to output any non-alphabetic characters. My next guess was to use map, but I couldn't format any lambdas that didn't suffer from the same corner case. Any suggestions? Maybe something with first-class functions? Messing with Array's guts? This seems like it could almost be a Code Golf question, but I feel like I'm just overthinking :)

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  • Access Violation When Writing Dynamic 2D Array... Sometimes

    - by Shraptnel
    This program is meant to generate a dynamic array, however it gives an access violation error when writing when given certain dimensions. Eg: R = 6, C = 5 crashes, but then R = 5, C = 6 doesn't. In case your wondering, it isn't my homework to "fix" this broken program, this is the method we were taught in class. Also part of my assessment is to use this method, so vectors are out. Thanks in advance! #include <iostream> using namespace std; int main(){ const int R = 6; const int C = 5; char **d; d = new char *[R]; for(int i=0; i<C; ++i){ d[i] = new char[C]; } //initialise for(int i=0; i<R; ++i){ for(int j=0; j<C; ++j){ d[i][j] = 'd'; cout<<d[i][j]; } cout<<endl; } cout<<endl; system("pause"); return 0; }

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  • What's going on here? Repeating rows in random list of lists.

    - by Jesse Aldridge
    I expected to get a grid of unique random numbers. Instead each row is the same sequence of numbers. What's going on here? from pprint import pprint from random import random nrows, ncols = 5, 5 grid = [[0] * ncols] * nrows for r in range(nrows): for c in range(ncols): grid[r][c] = int(random() * 100) pprint(grid) Example output: [[64, 82, 90, 69, 36], [64, 82, 90, 69, 36], [64, 82, 90, 69, 36], [64, 82, 90, 69, 36], [64, 82, 90, 69, 36]]

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  • Sorting a file with 55K rows and varying Columns

    - by Prasad
    Hi I want to find a programmatic solution using C++. I have a 900 files each of 27MB size. (just to inform about the enormity ). Each file has 55K rows and Varying columns. But the header indicates the columns I want to sort the rows in an order w.r.t to a Column Value. I wrote the sorting algorithm for this (definitely my newbie attempts, you may say). This algorithm is working for few numbers, but fails for larger numbers. Here is the code for the same: basic functions I defined to use inside the main code: int getNumberOfColumns(const string& aline) { int ncols=0; istringstream ss(aline); string s1; while(ss>>s1) ncols++; return ncols; } vector<string> getWordsFromSentence(const string& aline) { vector<string>words; istringstream ss(aline); string tstr; while(ss>>tstr) words.push_back(tstr); return words; } bool findColumnName(vector<string> vs, const string& colName) { vector<string>::iterator it = find(vs.begin(), vs.end(), colName); if ( it != vs.end()) return true; else return false; } int getIndexForColumnName(vector<string> vs, const string& colName) { if ( !findColumnName(vs,colName) ) return -1; else { vector<string>::iterator it = find(vs.begin(), vs.end(), colName); return it - vs.begin(); } } ////////// I like the Recurssive functions - I tried to create a recursive function ///here. This worked for small values , say 20 rows. But for 55K - core dumps void sort2D(vector<string>vn, vector<string> &srt, int columnIndex) { vector<double> pVals; for ( int i = 0; i < vn.size(); i++) { vector<string>meancols = getWordsFromSentence(vn[i]); pVals.push_back(stringToDouble(meancols[columnIndex])); } srt.push_back(vn[max_element(pVals.begin(), pVals.end())-pVals.begin()]); if (vn.size() > 1 ) { vn.erase(vn.begin()+(max_element(pVals.begin(), pVals.end())-pVals.begin()) ); vector<string> vn2 = vn; //cout<<srt[srt.size() -1 ]<<endl; sort2D(vn2 , srt, columnIndex); } } Now the main code: for ( int i = 0; i < TissueNames.size() -1; i++) { for ( int j = i+1; j < TissueNames.size(); j++) { //string fname = path+"/gse7307_Female_rma"+TissueNames[i]+"_"+TissueNames[j]+".txt"; //string fname2 = sortpath2+"/gse7307_Female_rma"+TissueNames[i]+"_"+TissueNames[j]+"Sorted.txt"; string fname = path+"/gse7307_Male_rma"+TissueNames[i]+"_"+TissueNames[j]+".txt"; string fname2 = sortpath2+"/gse7307_Male_rma"+TissueNames[i]+"_"+TissueNames[j]+"4Columns.txt"; //vector<string>AllLinesInFile; BioInputStream fin(fname); string aline; getline(fin,aline); replace (aline.begin(), aline.end(), '"',' '); string headerline = aline; vector<string> header = getWordsFromSentence(aline); int pindex = getIndexForColumnName(header,"p-raw"); int xcindex = getIndexForColumnName(header,"xC"); int xeindex = getIndexForColumnName(header,"xE"); int prbindex = getIndexForColumnName(header,"X"); string newheaderline = "X\txC\txE\tp-raw"; BioOutputStream fsrt(fname2); fsrt<<newheaderline<<endl; int newpindex=3; while ( getline(fin, aline) ){ replace (aline.begin(), aline.end(), '"',' '); istringstream ss2(aline); string tstr; ss2>>tstr; tstr = ss2.str().substr(tstr.length()+1); vector<string> words = getWordsFromSentence(tstr); string values = words[prbindex]+"\t"+words[xcindex]+"\t"+words[xeindex]+"\t"+words[pindex]; AllLinesInFile.push_back(values); } vector<string>SortedLines; sort2D(AllLinesInFile, SortedLines,newpindex); for ( int si = 0; si < SortedLines.size(); si++) fsrt<<SortedLines[si]<<endl; cout<<"["<<i<<","<<j<<"] = "<<SortedLines.size()<<endl; } } can some one suggest me a better way of doing this? why it is failing for larger values. ? The primary function of interest for this query is Sort2D function. thanks for the time and patience. prasad.

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  • Having trouble setting up API call using array of parameters

    - by Josh
    I am building a class to send API calls to Rapidshare and return the results of said call. Here's how I want the call to be done: $rs = new rs(); $params = array( 'sub' => 'listfiles_v1', 'type' => 'prem', 'login' => '10347455', 'password' => 'not_real_pass', 'realfolder' => '0', 'fields' => 'filename,downloads,size', ); print_r($rs->apiCall($params)); And here's the class so far: class RS { var $baseUrl = 'http://api.rapidshare.com/cgi-bin/rsapi.cgi?sub='; function apiCall($params) { $newUrl = $baseUrl; $keys = array_keys($params); $count = count($params); for($i = 0; $i < $count; $i++) { $newUrl .= $keys[$i]; $newUrl .= '&'; $newUrl .= $params[$keys[$i]]; } return $newUrl; } } Obviously i'm returning $newUrl and using print_r() to test the query string, and this is what it comes out as with the code shown above: sub&listfiles_v1type&premlogin&10347455password&_not_real_passrealfolder&0fields&filename,downloads,size When it should be: http://api.rapidshare.com/cgi-bin/rsapi.cgi?sub=listfiles_v1&type=prem&login=10347455&password=not_real_pass&realfolder=0&fields=filename,downloads,size Hopefully you can see what I'm trying to do here :P It's probably a silly mistake that I'm failing to find or a logical error. Thanks in advance.

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  • Proxy is created, and interceptor is in the __interceptors array, but the interceptor is never calle

    - by drewbu
    This is the first time I've used interceptors with the fluent registration and I'm missing something. With the following registration, I can resolve an IProcessingStep, and it's a proxy class and the interceptor is in the __interceptors array, but for some reason, the interceptor is not called. Any ideas what I'm missing? Thanks, Drew AllTypes.Of<IProcessingStep>() .FromAssembly(Assembly.GetExecutingAssembly()) .ConfigureFor<IProcessingStep>(c => c .Unless(Component.ServiceAlreadyRegistered) .LifeStyle.PerThread .Interceptors(InterceptorReference.ForType<StepLoggingInterceptor>()).First ), Component.For<StepMonitorInterceptor>(), Component.For<StepLoggingInterceptor>(), Component.For<StoreInThreadInterceptor>() public abstract class BaseStepInterceptor : IInterceptor { public void Intercept(IInvocation invocation) { IProcessingStep processingStep = (IProcessingStep)invocation.InvocationTarget; Command cmd = (Command)invocation.Arguments[0]; OnIntercept(invocation, processingStep, cmd); } protected abstract void OnIntercept(IInvocation invocation, IProcessingStep processingStep, Command cmd); } public class StepLoggingInterceptor : BaseStepInterceptor { private readonly ILogger _logger; public StepLoggingInterceptor(ILogger logger) { _logger = logger; } protected override void OnIntercept(IInvocation invocation, IProcessingStep processingStep, Command cmd) { _logger.TraceFormat("<{0}> for cmd:<{1}> - begin", processingStep.StepType, cmd.Id); bool exceptionThrown = false; try { invocation.Proceed(); } catch { exceptionThrown = true; throw; } finally { _logger.TraceFormat("<{0}> for cmd:<{1}> - end <{2}> times:<{3}>", processingStep.StepType, cmd.Id, !exceptionThrown && processingStep.CompletedSuccessfully ? "succeeded" : "failed", cmd.CurrentMetric==null ? "{null}" : cmd.CurrentMetric.ToString()); } } }

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  • Facebook connect PHP API - friends_get() returns empty array

    - by Soufiane Hassou
    Couple of hours ago I succeed to get friends_get() to return an array of friends, but, now I don't know if it is my fault or something is wrong in facebooks' end (API problems?). Anyway I used a code from their documentation: <?php require_once 'facebook-platform/php/facebook.php'; $appapikey = ''; //CHANGE THIS $appsecret = ''; //CHANGE THIS $facebook = new Facebook($appapikey, $appsecret); //$user_id = $facebook->require_login(); $fb_user=$facebook->get_loggedin_user(); //$fb_user = $facebook->user; $friends = $facebook->api_client->friends_get(); $friends = array_slice($friends, 0, 10); $i=0; foreach ($friends as $friend) { $personArray = $facebook->api_client->users_getInfo($friend,"name"); $person[$i]=$personArray[0]; $i++; } $i=0; foreach ($person as $f) { echo " ".$f['name']; //MORE DETAILS HERE IN STEP 2 echo "<br />"; $i++; } echo "<br />"; ?> The login is working great, but, I can't retrieve the list of friends and I test also with api_client->pages_isFan and it doesn't seem to work too (says not a fan while the user is).

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  • symfony get data from array

    - by iggnition
    Hi, I'm trying to use an SQL query to get data from my database into the template of a symfony project. my query: SQL: SELECT l.loc_id AS l__loc_id, l.naam AS l__naam, l.straat AS l__straat, l.huisnummer AS l__huisnummer, l.plaats AS l__plaats, l.postcode AS l__postcode, l.telefoon AS l__telefoon, l.opmerking AS l__opmerking, o.org_id AS o__org_id, o.naam AS o__naam FROM locatie l LEFT JOIN organisatie o ON l.org_id = o.org_id This is generated by this DQL: DQL: $this->q = Doctrine_Query::create() ->select('l.naam, o.naam, l.straat, l.huisnummer, l.plaats, l.postcode, l.telefoon, l.opmerking') ->from('Locatie l') ->leftJoin('l.Organisatie o') ->execute(); But now when i try to acces this data in the template by either doing: <?php foreach ($q as $locatie): ?> <?php echo $locatie['o.naam'] ?> or <?php foreach ($q as $locatie): ?> <?php echo $locatie['o__naam'] ?> i get the error from symfony: 500 | Internal Server Error | Doctrine_Record_UnknownPropertyException Unknown record property / related component "o__naam" on "Locatie" Does anyone know what is going wrong here? i dont know how to call the value from the array if the names in both query's dont work.

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  • Jquery with multi level json data array

    - by coder
    var data = [{"Address":{"Address":"4 Selby Road\nHowden","AddressId":"1414449","AddressLine1":"4 Selby Road","AddressLine2":"Howden","ContactId":"14248844","County":"North Humberside","Country":"UK","Postcode":"DN14 7JW","Town":"GOOLE","FullAddress":"4 Selby Road\nHowden\r\nGOOLE\r\nNorth Humberside\r\nDN14 7JW\r\nUnited Kingdom"},"ContactId":14248844,"Title":"Mrs","FirstName":"","Surname":"Neild","FullName":" Neild","PostCode":"DN14 7JW"},{"Address":{"Address":"466 Manchester Road\nBlackrod","AddressId":"1669615","AddressLine1":"466 Manchester Road","AddressLine2":"Blackrod","ContactId":"16721687","County":"","Country":"UK","Postcode":"BL6 5SU","Town":"BOLTON","FullAddress":"466 Manchester Road\nBlackrod\r\nBOLTON\r\nBL6 5SU\r\nUnited Kingdom"},"ContactId":16721687,"Title":"Miss","FirstName":"Andrea","Surname":"Neild","FullName":"Andrea Neild","PostCode":"BL6 5SU"},{"Address":{"Address":"5 Prospect Vale\nHeald Green","AddressId":"2127294","AddressLine1":"5 Prospect Vale","AddressLine2":"Heald Green","ContactId":"21178752","County":"Cheshire","Country":"UK","Postcode":"SK8 3RJ","Town":"CHEADLE","FullAddress":"5 Prospect Vale\nHeald Green\r\nCHEADLE\r\nCheshire\r\nSK8 3RJ\r\nUnited Kingdom"},"ContactId":21178752,"Title":"Mrs","FirstName":"","Surname":"Neild","FullName":" Neild","PostCode":"SK8 3RJ"}]; I'm tring to retrieve above json fommated data in jquery as below: var source = { localdata: data, sort: customsortfunc, datafields: [ { name: 'Surname', type: 'string' }, { name: 'FirstName', type: 'string' }, { name: 'Title', type: 'string' }, { name: 'Address.Address', type: 'string' } ], datatype: "array" }; var dataAdapter = new $.jqx.dataAdapter(source); $("#jqxgrid").jqxGrid( { width: 670, source: dataAdapter, theme: theme, sortable: true, pageable: true, autoheight: true, ready: function () { //$("#jqxgrid").jqxGrid('sortby', 'firstname', 'asc'); $("#jqxgrid").jqxGrid('sortby', 'FirstName', 'asc'); }, columns: [ { text: 'Title', datafield: 'Title', width: 100 }, { text: 'First Name', datafield: 'FirstName', width: 100 }, { text: 'Last Name', datafield: 'Surname', width: 100 }, { text: 'Address', datafield: 'Address.Address', width: 100 }, ] }); The only issue is there is no display for "Address.Adress". Can anyone advise me ?

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  • transform a matrix wtih 2 columns into a multimap

    - by Derek
    Hi, I am wondering if there is a way to transform a matrix of 2 column into a multimap or list of list. The first column of the matrix is an id (with possibly duplicated entries) and the 2nd column is some value. For example, if I have to following matrix m<-matrix(c(1,2,1,3,2,4), c(3,2)) i would like to transform it into the following list [[1]] 3,4 [[2]] 2 Thanks, Derek

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  • Extracting [] elements from form collection - mvc - should use icollection but have mix of types

    - by bergin
    hi there. have looked at Phil Haacks project on books at http://haacked.com/archive/2008/10/23/model-binding-to-a-list.aspx which has been useful, but I have a mix of data types. I use a modelview so that i can have a mix of objects, in this case: Order (ie order.id, order.date etc), Customer, SoilSamplingOrder and a list of SoilSamplingSubJobs which is like this [0].id, [0].field, [1].id, [1].field etc Perhaps I should be using ICollection instead of List? I had problems getting UpdateModel to work so I used an extract from collection method. the first 4 method calls : orderRepository.FindOrder(id); etc give the model the original to be edited. but after this point i'm a little lost in how to update the subjobs. I hope i have delineated enough to make sense of the problem. [HttpPost] public ActionResult Edit(int id, FormCollection collection) { Order order = orderRepository.FindOrder(id); Customer cust = orderRepository.FindCustomer(order.customer_id); IList<SoilSamplingSubJob> sssj = orderRepository.FindSubOrders(id); SoilSamplingOrder sso = orderRepository.FindSoilSampleOrder(id); try { UpdateModel(order, collection.ToValueProvider()); UpdateModel(cust, collection.ToValueProvider()); UpdateModel(sso, collection.ToValueProvider()); IList<SoilSamplingSubJob> sssjs = orderRepository.extractSSSJ(collection); foreach (var sj in sssjs) UpdateModel(sso, collection.ToValueProvider()); orderRepository.Save(); return RedirectToAction("Details", new { id=order.order_id}); } catch { return View(); } }

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  • Getting data from array of DataSet objects returned from web service

    - by Sarah Vessels
    I have a web service that I want to access when it is added as a web reference to my C# project. A particular method in the web service takes a SQL query string and returns the results of the query as a custom type. When I add the web service reference, the method shows up as returning DataSet[] instead of the custom type. This is fine provided I can still somehow access the data returned from the query within those DataSet objects. I ran a particular query that should return 6 rows; I got back a DataSet[] array with 6 elements. However, when I iterate over those DataSet objects, none of them has any tables (via the Tables property on the DataSet). What gives? Where is my data? The web service is tested and works when I use it as a data source in a Report Builder 2.0 report. I am able to send an XML SOAP query to the web service and get back XML results containing my data.

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