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  • Python: eliminating stack traces into library code?

    - by Mark Harrison
    When I get a runtime exception from the standard library, it's almost always a problem in my code and not in the library code. Is there a way to truncate the exception stack trace so that it doesn't show the guts of the library package? For example, I would like to get this: Traceback (most recent call last): File "./lmd3-mkhead.py", line 71, in <module> main() File "./lmd3-mkhead.py", line 66, in main create() File "./lmd3-mkhead.py", line 41, in create headver1[depotFile]=rev TypeError: Data values must be of type string or None. and not this: Traceback (most recent call last): File "./lmd3-mkhead.py", line 71, in <module> main() File "./lmd3-mkhead.py", line 66, in main create() File "./lmd3-mkhead.py", line 41, in create headver1[depotFile]=rev File "/usr/anim/modsquad/oses/fc11/lib/python2.6/bsddb/__init__.py", line 276, in __setitem__ _DeadlockWrap(wrapF) # self.db[key] = value File "/usr/anim/modsquad/oses/fc11/lib/python2.6/bsddb/dbutils.py", line 68, in DeadlockWrap return function(*_args, **_kwargs) File "/usr/anim/modsquad/oses/fc11/lib/python2.6/bsddb/__init__.py", line 275, in wrapF self.db[key] = value TypeError: Data values must be of type string or None.

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  • improve my python program to fetch the desire rows by using if condition

    - by user2560507
    unique.txt file contains: 2 columns with columns separated by tab. total.txt file contains: 3 columns each column separated by tab. I take each row from unique.txt file and find that in total.txt file. If present then extract entire row from total.txt and save it in new output file. ###Total.txt column a column b column c interaction1 mitochondria_205000_225000 mitochondria_195000_215000 interaction2 mitochondria_345000_365000 mitochondria_335000_355000 interaction3 mitochondria_345000_365000 mitochondria_5000_25000 interaction4 chloroplast_115000_128207 chloroplast_35000_55000 interaction5 chloroplast_115000_128207 chloroplast_15000_35000 interaction15 2_10515000_10535000 2_10505000_10525000 ###Unique.txt column a column b mitochondria_205000_225000 mitochondria_195000_215000 mitochondria_345000_365000 mitochondria_335000_355000 mitochondria_345000_365000 mitochondria_5000_25000 chloroplast_115000_128207 chloroplast_35000_55000 chloroplast_115000_128207 chloroplast_15000_35000 mitochondria_185000_205000 mitochondria_25000_45000 2_16595000_16615000 2_16585000_16605000 4_2785000_2805000 4_2775000_2795000 4_11395000_11415000 4_11385000_11405000 4_2875000_2895000 4_2865000_2885000 4_13745000_13765000 4_13735000_13755000 My program: file=open('total.txt') file2 = open('unique.txt') all_content=file.readlines() all_content2=file2.readlines() store_id_lines = [] ff = open('match.dat', 'w') for i in range(len(all_content)): line=all_content[i].split('\t') seq=line[1]+'\t'+line[2] for j in range(len(all_content2)): if all_content2[j]==seq: ff.write(seq) break Problem: but istide of giving desire output (values of those 1st column that fulfile the if condition). i nead somthing like if jth of unique.txt == ith of total.txt then write ith row of total.txt into new file.

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  • Working with a list, performing arithmetic logic in Python

    - by haea ohoh
    Suppose I have made a large list of numbers, and I want to make another one which I will add, pairwise, with the first list. Here's the first list, A: [109, 77, 57, 34, 94, 68, 96, 72, 39, 67, 49, 71, 121, 89, 61, 84, 45, 40, 104, 68, 54, 60, 68, 62, 91, 45, 41, 118, 44, 35, 53, 86, 41, 63, 111, 112, 54, 34, 52, 72, 111, 113, 47, 91, 107, 114, 105, 91, 57, 86, 32, 109, 84, 85, 114, 48, 105, 109, 68, 57, 78, 111, 64, 55, 97, 85, 40, 100, 74, 34, 94, 78, 57, 77, 94, 46, 95, 60, 42, 44, 68, 89, 113, 66, 112, 60, 40, 110, 89, 105, 113, 90, 73, 44, 39, 55, 108, 110, 64, 108] And here's B: [35, 106, 55, 61, 81, 109, 82, 85, 71, 55, 59, 38, 112, 92, 59, 37, 46, 55, 89, 63, 73, 119, 70, 76, 100, 49, 117, 77, 37, 62, 65, 115, 93, 34, 107, 102, 91, 58, 82, 119, 75, 117, 34, 112, 121, 58, 79, 69, 68, 72, 110, 43, 111, 51, 102, 39, 52, 62, 75, 118, 62, 46, 74, 77, 82, 81, 36, 87, 80, 56, 47, 41, 92, 102, 101, 66, 109, 108, 97, 49, 72, 74, 93, 114, 55, 116, 66, 93, 56, 56, 93, 99, 96, 115, 93, 111, 57, 105, 35, 99] How might I generate the arithmatic addition logic, processing each pairwise value one by one (A[0] and B[0], through A[99], B[99]) and producing the list C (A[0] + B[0] through A[99]+ B[99])?

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  • python and palindromes

    - by tekknolagi
    i recently wrote a method to cycle through /usr/share/dict/words and return a list of palindromes using my ispalindrome(x) method here's some of the code...what's wrong with it? it just stalls for 10 minutes and then returns a list of all the words in the file def reverse(a): return a[::-1] def ispalindrome(a): b = reverse(a) if b.lower() == a.lower(): return True else: return False wl = open('/usr/share/dict/words', 'r') wordlist = wl.readlines() wl.close() for x in wordlist: if not ispalindrome(x): wordlist.remove(x) print wordlist

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  • Python for statement giving an Invalid Syntax error with list

    - by Cold Diamondz
    I have some code in which is throwing an error (I'm using repl.it) import random students = ['s1:0','s2:0','s3:0'] while True: print'\n'*50 print'Ticket Machine'.center(80) print'-'*80 print'1. Clear Student Ticket Values'.center(80) print'2. Draw Tickets'.center(80) menu = raw_input('-'*80+'\nChoose an Option: ') if menu == '1': print'\n'*50 print'CLEARED!' students = ['s1:0','s2:0','s3:0'] raw_input('Press enter to return to the main menu!') elif menu == '2': tickets = [] print'\n'*50 times = int(raw_input('How many tickets to draw? ') for a in students: for i in range(a.split(':')[1]): tickets.append(a.split(':')[0]) for b in range(1,times+1): print str(b) + '. ' + random.choice(tickets) else: print'\n'*50 print'That was not an option!' raw_input('Press enter to return to the main menu!') But it is throwing this error: File "<stdin>", line 19 for a in students: ^ SyntaxError: invalid syntax I am planning on using this in a class, but I can't use it until the bug is fixed, also, student names have been removed for privacy reasons.

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  • Invoking a superclass's class methods in Python

    - by LeafStorm
    I am working on a Flask extension that adds CouchDB support to Flask. To make it easier, I have subclassed couchdb.mapping.Document so the store and load methods can use the current thread-local database. Right now, my code looks like this: class Document(mapping.Document): # rest of the methods omitted for brevity @classmethod def load(cls, id, db=None): return mapping.Document.load(cls, db or g.couch, id) I left out some for brevity, but that's the important part. However, due to the way classmethod works, when I try to call this method, I receive the error message File "flaskext/couchdb.py", line 187, in load return mapping.Document.load(cls, db or g.couch, id) TypeError: load() takes exactly 3 arguments (4 given) I tested replacing the call with mapping.Document.load.im_func(cls, db or g.couch, id), and it works, but I'm not particularly happy about accessing the internal im_ attributes (even though they are documented). Does anyone have a more elegant way to handle this?

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  • Parsing line with delimiter in Python

    - by neversaint
    I have lines of data which I want to parse. The data looks like this: a score=216 expect=1.05e-06 a score=180 expect=0.0394 What I want to do is to have a subroutine that parse them and return 2 values (score and expect) for each line. However this function of mine doesn't seem to work: def scoreEvalFromMaf(mafLines): for word in mafLines[0]: if word.startswith("score="): theScore = word.split('=')[1] theEval = word.split('=')[2] return [theScore, theEval] raise Exception("encountered an alignment without a score") Please advice what's the right way to do it?

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  • Python/Django Concatenate a string depending on whether that string exists

    - by Douglas Meehan
    I'm creating a property on a Django model called "address". I want address to consist of the concatenation of a number of fields I have on my model. The problem is that not all instances of this model will have values for all of these fields. So, I want to concatenate only those fields that have values. What is the best/most Pythonic way to do this? Here are the relevant fields from the model: house = models.IntegerField('House Number', null=True, blank=True) suf = models.CharField('House Number Suffix', max_length=1, null=True, blank=True) unit = models.CharField('Address Unit', max_length=7, null=True, blank=True) stex = models.IntegerField('Address Extention', null=True, blank=True) stdir = models.CharField('Street Direction', max_length=254, null=True, blank=True) stnam = models.CharField('Street Name', max_length=30, null=True, blank=True) stdes = models.CharField('Street Designation', max_length=3, null=True, blank=True) stdessuf = models.CharField('Street Designation Suffix',max_length=1, null=True, blank=True) I could just do something like this: def _get_address(self): return "%s %s %s %s %s %s %s %s" % (self.house, self.suf, self.unit, self.stex, self.stdir, self.stname, self.stdes, self.stdessuf) but then there would be extra blank spaces in the result. I could do a series of if statements and concatenate within each, but that seems ugly. What's the best way to handle this situation? Thanks.

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  • [Python] Tips for making a fraction calculator code more optimized (faster and using less memory)

    - by Logic Named Joe
    Hello Everyone, Basicly, what I need for the program to do is to act a as simple fraction calculator (for addition, subtraction, multiplication and division) for the a single line of input, for example: -input: 1/7 + 3/5 -output: 26/35 My initial code: import sys def euclid(numA, numB): while numB != 0: numRem = numA % numB numA = numB numB = numRem return numA for wejscie in sys.stdin: wyjscie = wejscie.split(' ') a, b = [int(x) for x in wyjscie[0].split("/")] c, d = [int(x) for x in wyjscie[2].split("/")] if wyjscie[1] == '+': licz = a * d + b * c mian= b * d nwd = euclid(licz, mian) konA = licz/nwd konB = mian/nwd wynik = str(konA) + '/' + str(konB) print(wynik) elif wyjscie[1] == '-': licz= a * d - b * c mian= b * d nwd = euclid(licz, mian) konA = licz/nwd konB = mian/nwd wynik = str(konA) + '/' + str(konB) print(wynik) elif wyjscie[1] == '*': licz= a * c mian= b * d nwd = euclid(licz, mian) konA = licz/nwd konB = mian/nwd wynik = str(konA) + '/' + str(konB) print(wynik) else: licz= a * d mian= b * c nwd = euclid(licz, mian) konA = licz/nwd konB = mian/nwd wynik = str(konA) + '/' + str(konB) print(wynik) Which I reduced to: import sys def euclid(numA, numB): while numB != 0: numRem = numA % numB numA = numB numB = numRem return numA for wejscie in sys.stdin: wyjscie = wejscie.split(' ') a, b = [int(x) for x in wyjscie[0].split("/")] c, d = [int(x) for x in wyjscie[2].split("/")] if wyjscie[1] == '+': print("/".join([str((a * d + b * c)/euclid(a * d + b * c, b * d)),str((b * d)/euclid(a * d + b * c, b * d))])) elif wyjscie[1] == '-': print("/".join([str((a * d - b * c)/euclid(a * d - b * c, b * d)),str((b * d)/euclid(a * d - b * c, b * d))])) elif wyjscie[1] == '*': print("/".join([str((a * c)/euclid(a * c, b * d)),str((b * d)/euclid(a * c, b * d))])) else: print("/".join([str((a * d)/euclid(a * d, b * c)),str((b * c)/euclid(a * d, b * c))])) Any advice on how to improve this futher is welcome. Edit: one more thing that I forgot to mention - the code can not make use of any libraries apart from sys.

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  • Does my function right on python?

    - by Ali Ismayilov
    Write a function which takes a string argument, and creates and returns an Employee object containing details of the employee specified by the string. The string should be assumed to have the format 12345 25000 Consultant Bart Simpson The first three items in the line will be the payroll number, salary and job title and the rest of the line will be the name. There will be no spaces in the job title but there may be one or more spaces in the name. My function: def __str__(self): return format(self.payroll, "d") + format(self.salary, "d") + ' ' \ + self.jobtitle + self.name

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  • Finding most recently edited file in python

    - by zztpp5521
    I have a set of folders, and I want to be able to run a function that will find the most recently edited file and tell me the name of the file and the folder it is in. Folder layout: root Folder A File A File B Folder B File C File D etc... Any tips to get me started as i've hit a bit of a wall.

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  • (Python) algorithm to randomly select a key based on proportionality/weight

    - by LaundroMat
    Hi - I'm a bit at a loss as to how to find a clean algorithm for doing the following: Suppose I have a dict k: >>> k = {'A': 68, 'B': 62, 'C': 47, 'D': 16, 'E': 81} I now want to randomly select one of these keys, based on the 'weight' they have in the total (i.e. sum) amount of keys. >>> sum(k.values()) >>> 274 So that there's a >>> 68.0/274.0 >>> 0.24817518248175183 24.81% percent change that A is selected. How would you write an algorithm that takes care of this? In other words, that makes sure that on 10.000 random picks, A will be selected 2.481 times?

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  • Python: Pickling highly-recursive objects without using `setrecursionlimit`

    - by cool-RR
    I've been getting RuntimeError: maximum recursion depth exceeded when trying to pickle a highly-recursive tree object. Much like this asker here. He solved his problem by setting the recursion limit higher with sys.setrecursionlimit. But I don't want to do that: I think that's more of a workaround than a solution. Because I want to be able to pickle my trees even if they have 10,000 nodes in them. (It currently fails at around 200.) (Also, every platform's true recursion limit is different, and I would really like to avoid opening this can of worms.) Is there any way to solve this at the fundamental level? If only the pickle module would pickle using a loop instead of recursion, I wouldn't have had this problem. Maybe someone has an idea how I can cause something like this to happen, without rewriting the pickle module? Any other idea how I can solve this problem will be appreciated.

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  • python function that returns a function from list of functions

    - by thkang
    I want to make following function: 1)input is a number. 2)functions are indexed, return a function whose index matches given number here's what I came up with: def foo_selector(whatfoo): def foo1(): return def foo2(): return def foo3(): return ... def foo999(): return #something like return foo[whatfoo] the problem is, how can I index the functions (foo#)? I can see functions foo1 to foo999 by dir(). however, dir() returns name of such functions, not the functions themselves. In the example, those foo-functions aren't doing anything. However in my program they perform different tasks and I can't automatically generate them. I write them myself, and have to return them by their name.

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  • Python f.write() at beginning of file?

    - by kristus
    I'm doing it like this now, but i want it to write at the beginning of the file instead. f = open('out.txt', 'a') # or 'w'? f.write("string 1") f.write("string 2") f.write("string 3") f.close() so that the contenst of out.txt will be: string 3 string 2 string 1 and not (like this code does): string 1 string 2 string 3

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  • Python finding substring between certain characters using regex and replace()

    - by jCuga
    Suppose I have a string with lots of random stuff in it like the following: strJunk ="asdf2adsf29Value=five&lakl23ljk43asdldl" And I'm interested in obtaining the substring sitting between 'Value=' and '&', which in this example would be 'five'. I can use a regex like the following: match = re.search(r'Value=?([^&>]+)', strJunk) >>> print match.group(0) Value=five >>> print match.group(1) five How come match.group(0) is the whole thing 'Value=five' and group(1) is just 'five'? And is there a way for me to just get 'five' as the only result? (This question stems from me only having a tenuous grasp of regex) I am also going to have to make a substitution in this string such such as the following: val1 = match.group(1) strJunk.replace(val1, "six", 1) Which yields: 'asdf2adsf29Value=six&lakl23ljk43asdldl' Considering that I plan on performing the above two tasks (finding the string between 'Value=' and '&', as well as replacing that value) over and over, I was wondering if there are any other more efficient ways of looking for the substring and replacing it in the original string. I'm fine sticking with what I've got but I just want to make sure that I'm not taking up more time than I have to be if better methods are out there.

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  • printing dynamically string in one line in python

    - by EngHamoud
    I'm trying to print strings in one line. I've found solutions but they don't works with windows correctly. I have text file contains names and I want to print them like this name=john then change john to next name and keep name=, I've made this code but didn't work correctly with windows: op = open('names.txt','r') print 'name=', for i in op.readlines(): print '\r'+i.strip('\n') thank you for your time

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  • in python how to remove this \n from string or list

    - by pritesh modi
    this is my main string "action","employee_id","name" "absent","pritesh",2010/09/15 00:00:00 so after name coolumn its goes to new line but here i append to list a new line character is added and make it like this way data_list*** ['"action","employee_id","name"\n"absent","pritesh",2010/09/15 00:00:00\n'] here its append the new line character with absent but actually its a new line strarting but its appended i want to make it like data_list*** ['"action","employee_id","name","absent","pritesh",2010/09/15 00:00:00']

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  • Python's string.translate() doesn't fully work?

    - by Rhubarb
    Given this example, I get the error that follows: print u'\2033'.translate({2033:u'd'}) C:\Python26\lib\encodings\cp437.pyc in encode(self, input, errors) 10 11 def encode(self,input,errors='strict'): ---> 12 return codecs.charmap_encode(input,errors,encoding_map) 13 14 def decode(self,input,errors='strict'): UnicodeEncodeError: 'charmap' codec can't encode character u'\x83' in position 0

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  • using Python reduce over a list of pairs

    - by user248237
    I'm trying to pair together a bunch of elements in a list to create a final object, in a way that's analogous to making a sum of objects. I'm trying to use a simple variation on reduce where you consider a list of pairs rather than a flat list to do this. I want to do something along the lines of: nums = [1, 2, 3] reduce(lambda x, y: x + y, nums) except I'd like to add additional information to the sum that is specific to each element in the list of numbers nums. For example for each pair (a,b) in the list, run the sum as (a+b): nums = [(1, 0), (2, 5), (3, 10)] reduce(lambda x, y: (x[0]+x[1]) + (y[0]+y[1]), nums) This does not work: >>> reduce(lambda x, y: (x[0]+x[1]) + (y[0]+y[1]), nums) Traceback (most recent call last): File "<stdin>", line 1, in <module> File "<stdin>", line 1, in <lambda> TypeError: 'int' object is unsubscriptable Why does it not work? I know I can encode nums as a flat list - that is not the point - I just want to be able to create a reduce operation that can iterate over a list of pairs, or over two lists of the same length simultaneously and pool information from both lists. thanks.

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  • Using Python read specific (column, row) values from a txt file

    - by user2955708
    I would like to read values from a text file until that is a float value. Lets say I have the following file: 14:53:55 Load 300 Speed 200 Distance,m Fz Fx Speed 0.0000 249 4 6.22 0.0002 247 33 16.29 0.0004 246 49 21.02 0.2492 240 115 26.97 0.2494 241 112 21.78 0.2496 240 109 13.09 0.2498 169 79 0.27 Distance,m Fz Fx Speed 0.0000 249 4 7.22 0.0002 247 33 1.29 0.0004 246 49 271.02 0.2492 240 115 26.97 0.2494 241 112 215.78 0.2496 240 109 13.09 0.2498 169 79 0.27 And I need only the values under the first Distance column. So something like skip the first few rows, then read values from the first column while it is float. Thanks your help in advance

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