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• On Disk Substring index

  - by emeryc

  I have a file (fasta file to be specific) that I would like to index, so that I can quickly locate any substring within the file and then find the location within the original fasta file. This would be easy to do in many cases, using a Trie or substring array, unfortunately the strings I need to index are 800+ MBs which means that doing them in memory in unacceptable, so I'm looking for a reasonable way to create this index on disk, with minimal memory usage. (edit for clarification) I am only interested in the headers of proteins, so for the largest database I'm interested in, this is about 800 MBs of text. I would like to be able to find an exact substring within O(N) time based on the input string. This must be useable on 32 bit machines as it will be shipped to random people, who are not expected to have 64 bit machines. I want to be able to index against any word break within a line, to the end of the line (though lines can be several MBs long). Hopefully this clarifies what is needed and why the current solutions given are not illuminating. I should also add that this needs to be done from within java, and must be done on client computers on various operating systems, so I can't use any OS Specific solution, and it must be a programatic solution.

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• Open closed prinicple, problem

  - by Marcus

  Hi, I'm trying to apply OCP to a code snippet I have that in it's current state is really smelly, but I feel I'm not getting all the way to the end. Current code: public abstract class SomeObject {} public class SpecificObject1 : SomeObject {} public class SpecificObject2 : SomeObject {} // Smelly code public class Model { public void Store(SomeObject someObject) { if (someObject is SpecificObject1) {} else if (someObject is SpecificObject2) {} } } That is really ugly, my new approach looks like this: // No so smelly code public class Model { public void Store(SomeObject someObject) { throw new Expception("Not allowed!"); } public void Store(SpecificObject1 someObject) {} public void Store(SpecificObject2 someObject) {} } When a new SomeObject type comes along I must implement how that specific object is stored, this will break OCP cause I need to alter the Model-class. To move the store logic to SomeObject also feels wrong cause then I will violate SRP (?), becuase in this case the SomeObject is almost like a DTO, it's resposibility it not how to know to store itself. If a new implementation to SomeObject comes along who's store implementation is missing I will get a runtime error due to exception in Store method in Model class, it also feels like a code smell. This is because calling code will in the form of IEnumerable<SomeObject> sequence; I will not know the specific types of the sequence objects. I can't seem to grasp the OCP-concept. Anyone has any concrete examples or links that is a bit more than just some Car/Fruit example?

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• What's the correct place to share application logic in CakePHP?

  - by Pichan

  I guess simple answer to the question would be a component. Although I agree, I feel weird having to write a component for something so specific. For example, let's say I have a table of users. When a user is created, it should form a chain reaction of events, initiating different kinds of data related to the user all around the database. I figured it would be best to avoid directly manipulating the database from different controllers and instead pack all that neatly in a method. However since some logic needs to be accesed separately, I really can't have the whole package in a single method. Instead I thought it would be logical to break it up to smaller pieces(like $userModelOrController->createNew() and $candyStorageModelOrController->createNew()) that only interact with their respective database table. Now, if the logic is put to the model, it works great until I need to use other models. Of course it's possible, but when compared to loading models in a controller, it's not that simple. It's like a Cake developer telling me "Sure, it's possible if you want to do it that way but that's not how I would do it". Then, if the logic is put to the controller, I can access other models really easy through $this->loadModel(), but that brings me back to the previously explained situation since I need to be able to continue the chain reaction indefinitely. Accessing other controllers from a controller is possible, but again there doesn't seem to be any direct way of doing so, so I'm guessing I'm still not doing it right. By using a component this problem could be solved easily, since components are available to every controller I want. But like I wrote at the beginning, it feels awkward to create a component specifically for this one task. To me, components seem more like packages of extra functionality(like the core components) and not something to share controller-specific logic. Since I'm new to this whole MVC thing, I could've completely misunderstood the concept. Once again, I would be thankful if someone pointed me to the right direction :)

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• Classical task-scheduling assignment

  - by Bruno

  I am working on a flight scheduling app (disclaimer: it's for a college project, so no code answers, please). Please read this question w/ a quantum of attention before answering as it has a lot of peculiarities :( First, some terminology issues: You have planes and flights, and you have to pair them up. For simplicity's sake, we'll assume that a plane is free as soon as the flight using it prior lands. Flights are seen as tasks: They have a duration They have dependencies They have an expected date/time for beginning Planes can be seen as resources to be used by tasks (or flights, in our terminology). Flights have a specific type of plane needed. e.g. flight 200 needs a plane of type B. Planes obviously are of one and only one specific type, e.g., Plane Airforce One is of type C. A "project" is the set of all the flights by an airline in a given time period. The functionality required is: Finding the shortest possible duration for a said project The earliest and latest possible start for a task (flight) The critical tasks, with basis on provided data, complete with identifiers of preceding tasks. Automatically pair up flights and planes, so as to get all flights paired up with a plane. (Note: the duration of flights is fixed) Get a Gantt diagram with the projects scheduling, in which all flights begin as early as possible, showing all previously referred data graphically (dependencies, time info, etc.) So the questions is: How in the world do I achieve this? Particularly: We are required to use a graph. What do the graph's edges and nodes respectively symbolise? Are we required to discard tasks to achieve the critical tasks set? If you could also recommend some algorithms for us to look up, that'd be great.

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• Implode and remove empty values

  - by binoy

  Hi, I have an array like this $arr = array('name' => 'John', 'address' => 'IInd Street', 'state' => '', 'country' => 'US'); I want to display the values as John, IInd Street, US (ie, If any value is empty, I don't want to display comma and break over there) I could able to display this with the following code $values = implode(',', $arr); echo $str = implode(',<br />',array_filter(explode(',', $values))); Is there any better way to do this ?

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• Can isdigit legitimately be locale dependent in C

  - by cdev

  In the section covering setlocale, the ANSI C standard states in a footnote that the only ctype.h functions whose behaviour is not affected by the current locale are isdigit and isxdigit. The Microsoft implementation of isdigit is locale dependent because, for example, in locales using code page 1250 isdigit only returns non-zero for characters in the range 0x30 ('0') - 0x39 ('9'), whereas in locales using code page 1252 isdigit also returns non-zero for the superscript digits 0xB2 ('²'), 0xB3 ('³') and 0xB9 ('¹'). Is Microsoft in violation of the C standard by making isdigit locale dependent? In this question I am primarily interested in C90, which Microsoft claims to conform to, rather than C99. Additional background: Microsoft's own documentation of setlocale incorrectly states that isdigit is unaffected by the LC_CTYPE part of the locale. The section of the C standard that covers the ctype.h functions contains some wording that I consider ambiguous: "The behavior of these functions is affected by the current locale. Those functions that have locale-specific aspects only when not in the "C" locale are noted below." I consider this ambiguous because it is unclear what it is trying to say about functions such as isdigit for which there are no notes about locale-specific aspects. It might be trying to say that such functions must be assumed to be locale dependent, in which case Microsoft's implementation of isdigit would be OK. (Except that the footnote I mentioned earlier seems to contradict this interpretation.)

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• Is it advisable to have non-ascii characters in the URL?

  - by Ravi Gummadi

  We are currently working on a I18N project. I was just wondering what are the complications of having the non-ascii characters in the URL. If its not, what are the alternatives to deal with this problem? EDIT (in response to Maxym's answer): The site is going to be local to specific country and I need not worry about the world wide public accessing this site. I understand that from usability point of view, It is really annoying. What are the other technical problem associated with this?

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• How to localize static content in database with Django

  - by man with python

  My app has tables for languages and countries (actually django-countries at the moment, but open for suggestions). The tables are populated when I initialize the database and remain static after that. What would be the ideal localization mechanism for the contents of these tables, so that I can show the country and language names to users in their chosen site language? I'm aware of projects like django-multilingual and transdb, but IMO they are more suitable for dynamic content, i.e. stuff that's supposed to be modified. Please englighten me!

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• Address Validation API

  - by Paul

  I have a task to validate addresses entered into a system I am currently creating. The system requires that address entered are validated against a valid data source. In the UK the dataset comes from the Royal Mail and is expensive to access. The data needed is post code info for the whold of europe to start with accessed by an API into the web application. There are a number of companies that offer this service, QAS Capscan Postcode anywhere These all offer the service I require. However this is expensive and in some cases not a complete data set. e.g. not Ireland I was also wondering if there would be a way to utalis the google maps API to validate this data via postal code and country. Would the google maps method be possible or do I have to go down the line of one of these expensive companies? Any thoughts on what line I should take.

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• How to bind the arguments in NSString in iphone?

  - by Prash.......

  Hi, i developing an application in which i want to bind my own parameter with an URL for http post request. But i findout the serious problem during the string binding, The code snippet as follows: NSString *mainURL1 = @"http://xxx.xxx.xx.xx/webservice/Service.asmx?op=UserDetailsNew?"; NSString *mainURL2 = [mainURL1 stringByAppendingString:@"MobileNo=%@",txtMobile.text]; NSString *mainURL3 = [mainURL2 stringByAppendingString:@"&Country=%@",txtCountry.text]; NSString *mainURL4 = [mainURL3 stringByAppendingString:@"&UserName=%@",txtName.text]; NSString *mainURL5 = [mainURL4 stringByAppendingString:@"&ScreenName=%@",txtScreenname.text]; NSString *mainURL6 = [mainURL5 stringByAppendingString:@"&EmailId=%@",txtemailid.text]; NSString *mainURL7 = [mainURL6 stringByAppendingString:@"&Password=%@",txtpassword.text]; NSString *mainURL8 = [mainURL7 stringByAppendingString:@"&RetypePassword=%@",txtretypepassword.text]; NSString *mainURL9 = [mainURL8 stringByAppendingString:@"%20HTTP/1.1"]; on binding the runtime arguments it ginev me too many parameter appending in NSString function. how i solve above problem?

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• How to get data from another page (different servers)

  - by rjovic

  I want to make a IE8 web slice who will show remaining amount of students "food credit". In our country we have web page where we can see ammount www.cap.srce.hr/ProvjeraSaldo.aspx. When I fill textbox with my card number i recieve remaining amount. Now, i want to speed that process with ie8 web slice. So is it possible to get data from another webserver page and than display it in my web slice on my web server. I tried to use XMLHTTP request but it can be only used on same domains. Url for getting amount is : http://www.cap.srce.hr/saldo.aspx?brk={number_of_card}

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• How it is better to organise a large database of addresses?

  - by shurik2533

  How it is better to organise a large database of addresses? It is need to create mysql database of addresses. How it is better for organising? I have two variants: 1) cuontries id|name 1 |Russia cities id|name 1 |Moscow 2 |Saratov villages id|name streets id|name 1 |Lenin st. places id|name |country_id|city_id|village_id|street_id|building_number|office|flat_number|room_number 1 |somebuilding |1 |1 |NULL |1 |31 |12a |NULL |NULL For simplification I use not all making addresses. If any part does not participate in the address it is equal NULL 2) addressElements id|name 1 |country 2 |city 3 |village 4 |street 5 |office 6 |flat_number 7 |room_number addressValues id|addressElement_id|value 1 |1 |Russia 2 |2 |Saratov 3 |2 |Moscow 4 |3 |Prostokvashino 5 |4 |Lenin st. places id| name 1 | somebuilding places_has_addressValues place_id|addressValue_id 1 |1 1 |3 1 |5 UPD. I have decided to make as follows

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• Eliminate full table scan due to BETWEEN (and GROUP BY)

  - by Dave Jarvis

  Description According to the explain command, there is a range that is causing a query to perform a full table scan (160k rows). How do I keep the range condition and reduce the scanning? I expect the culprit to be: Y.YEAR BETWEEN 1900 AND 2009 AND Code Here is the code that has the range condition (the STATION_DISTRICT is likely superfluous). SELECT COUNT(1) as MEASUREMENTS, AVG(D.AMOUNT) as AMOUNT, Y.YEAR as YEAR, MAKEDATE(Y.YEAR,1) as AMOUNT_DATE FROM CITY C, STATION S, STATION_DISTRICT SD, YEAR_REF Y FORCE INDEX(YEAR_IDX), MONTH_REF M, DAILY D WHERE -- For a specific city ... -- C.ID = 10663 AND -- Find all the stations within a specific unit radius ... -- 6371.009 * SQRT( POW(RADIANS(C.LATITUDE_DECIMAL - S.LATITUDE_DECIMAL), 2) + (COS(RADIANS(C.LATITUDE_DECIMAL + S.LATITUDE_DECIMAL) / 2) * POW(RADIANS(C.LONGITUDE_DECIMAL - S.LONGITUDE_DECIMAL), 2)) ) <= 50 AND -- Get the station district identification for the matching station. -- S.STATION_DISTRICT_ID = SD.ID AND -- Gather all known years for that station ... -- Y.STATION_DISTRICT_ID = SD.ID AND -- The data before 1900 is shaky; insufficient after 2009. -- Y.YEAR BETWEEN 1900 AND 2009 AND -- Filtered by all known months ... -- M.YEAR_REF_ID = Y.ID AND -- Whittled down by category ... -- M.CATEGORY_ID = '003' AND -- Into the valid daily climate data. -- M.ID = D.MONTH_REF_ID AND D.DAILY_FLAG_ID <> 'M' GROUP BY Y.YEAR Update The SQL is performing a full table scan, which results in MySQL performing a "copy to tmp table", as shown here: +----+-------------+-------+--------+-----------------------------------+--------------+---------+-------------------------------+--------+-------------+ | id | select_type | table | type | possible_keys | key | key_len | ref | rows | Extra | +----+-------------+-------+--------+-----------------------------------+--------------+---------+-------------------------------+--------+-------------+ | 1 | SIMPLE | C | const | PRIMARY | PRIMARY | 4 | const | 1 | | | 1 | SIMPLE | Y | range | YEAR_IDX | YEAR_IDX | 4 | NULL | 160422 | Using where | | 1 | SIMPLE | SD | eq_ref | PRIMARY | PRIMARY | 4 | climate.Y.STATION_DISTRICT_ID | 1 | Using index | | 1 | SIMPLE | S | eq_ref | PRIMARY | PRIMARY | 4 | climate.SD.ID | 1 | Using where | | 1 | SIMPLE | M | ref | PRIMARY,YEAR_REF_IDX,CATEGORY_IDX | YEAR_REF_IDX | 8 | climate.Y.ID | 54 | Using where | | 1 | SIMPLE | D | ref | INDEX | INDEX | 8 | climate.M.ID | 11 | Using where | +----+-------------+-------+--------+-----------------------------------+--------------+---------+-------------------------------+--------+-------------+ Related http://dev.mysql.com/doc/refman/5.0/en/how-to-avoid-table-scan.html http://dev.mysql.com/doc/refman/5.0/en/where-optimizations.html http://stackoverflow.com/questions/557425/optimize-sql-that-uses-between-clause Thank you!

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• Access VBA question: Change the query being referenced by a function, depending on context

  - by Tara Amatista

  I have a custom function in Access2007 that hinges on grabbing data out of a specific query. It opens Outlook, creates a new email and populates the fields with specific addresses and data taken from the query ("DecisionEmail"). Now I want to make a different query ("RequestEmail") and have it populate the email with that data. So all I have to do is change this line: Set MailList = db.OpenRecordset("DecisionEmail") and that's where I get stumped. This is my desired result: If the user is on Form_Decision and clicks the button "Send email", "DecisionEmail" will get plugged into the function and that data will appear in the email. If the user on Form_SendRequest and clicks the button "Send email", "RequestEmail" will instead get plugged in. The reason that these are different queries is because they contain very different information that is smudged about in different ways. However, since it's just one little thing that needs to change in the function code, I don't think a brand new function is a good idea. My last resort would be to make a brand new function and use the Conditions field in the Macro interface to choose between them, but I have a feeling there's a more elegant solution possible. I have a vague notion of setting the query names as variables and using an If statement but I just don't have the mental vocabulary for thinking through this.

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• HTML, PHP No data in drop down box

  - by Makinitez21

  Hey, I am trying to figure out why a website's drop down box will not show any options. The data file for this drop down box comes from a microsoft access .mde file. The file is present and after the last update was working fine. Some changes happened to the site, i.e. text got added along with some photos. Im not saying this was when the drop down box went bad, but when it was discovered these were the only changes made. The data file seems fine as it is worked with everyday. Can anyone point me in the right direction as to where to begin looking for the bug? For a better idea of what I am talking about, check out the Site http://yogaalliance.org/teacher_search.cfm and try selecting a country. Thank you in advance

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• Suggestions for a django db structure

  - by rh0dium

  Hi Say I have the unknown number of questions. For example: Is the sky blue [y/n] What date were your born on [date] What is pi [3.14] What is a large integ [100] Now each of these questions poses a different but very type specific answer (boolean, date, float, int). Natively django can happily deal with these in a model. class SkyModel(models.Model): question = models.CharField("Is the sky blue") answer = models.BooleanField(default=False) class BirthModel(models.Model): question = models.CharField("What date were your born on") answer = models.DateTimeField(default=today) class PiModel(models.Model) question = models.CharField("What is pi") answer = models.FloatField() But this has the obvious problem in that each question has a specific model - so if we need to add a question later I have to change the database. Yuck. So now I want to get fancy - How do a set up a model where by the answer type conversion happens automagically? ANSWER_TYPES = ( ('boolean', 'boolean'), ('date', 'date'), ('float', 'float'), ('int', 'int'), ('char', 'char'), ) class Questions(models.model): question = models.CharField(() answer = models.CharField() answer_type = models.CharField(choices = ANSWER_TYPES) default = models.CharField() So in theory this would do the following: When I build up my views I look at the type of answer and ensure that I only put in that value. But when I want to pull that answer back out it will return the data in the format specified by the answer_type. Example 3.14 comes back out as a float not as a str. How can I perform this sort of automagic transformation? Or can someone suggest a better way to do this? Thanks much!!

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• How to map combinations of things to a relational database?

  - by Space_C0wb0y

  I have a table whose records represent certain objects. For the sake of simplicity I am going to assume that the table only has one row, and that is the unique ObjectId. Now I need a way to store combinations of objects from that table. The combinations have to be unique, but can be of arbitrary length. For example, if I have the ObjectIds 1,2,3,4 I want to store the following combinations: {1,2}, {1,3,4}, {2,4}, {1,2,3,4} The ordering is not necessary. My current implementation is to have a table Combinations that maps ObjectIds to CombinationIds. So every combination receives a unique Id: ObjectId | CombinationId ------------------------ 1 | 1 2 | 1 1 | 2 3 | 2 4 | 2 This is the mapping for the first two combinations of the example above. The problem is, that the query for finding the CombinationId of a specific Combination seems to be very complex. The two main usage scenarios for this table will be to iterate over all combinations, and the retrieve a specific combination. The table will be created once and never be updated. I am using SQLite through JDBC. Is there any simpler way or a best practice to implement such a mapping?

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• Control Javascript > CSS through Flash

  - by Jason b.

  Hi All, Ideal situation/setup: A page containing 1 Flash movie and a separate div containing a few hyperlinks. These hyperlinks each have a unique class name like so: Copy code <ul> <li><a href="" class="randomname1"></a></li> <li><a href="" class="randomname2"></a></li> <li><a href="" class="randomname3"></a></li> <li><a href="" class="randomname4"></a></li> </ul> The Flash movie itself will contain 4 buttons. Clicking on one of these buttons should make the Flash communicate with Jquery/JS and tell it to highlight the specific classname. Ideas so far For the javascript, it would look like $(function() { function setClass(className) {$("."+className).css("background","red");} }); And in specific keyframes within Flash 1. button 1 ExternalInterface.call("setClass","randomname1"); 1. button 2 ExternalInterface.call("setClass","randomname2"); 1. button 3 ExternalInterface.call("setClass","randomname3"); 1. button 4 ExternalInterface.call("setClass","randomname4"); The problem is that it is not really working well and i am not sure if i am making Flash communicate with JS properly. Any ideas or hints to steer me in the right direction again? Thank you in advance J.

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• Access Relationship Table in Grails

  - by WaZ

  Hi, I have the following domains classes: class Posts{ String Name String Country static hasMany = [tags:Tags] static constraints = { } } class Tags{ String Name static belongsTo = Posts static hasMany = [posts:Posts] static constraints = { } String toString() { "${TypeName}" } } Grails creates an another table in the database i.e. Posts_Tags. My requirement is: E.g. 1 post has 3 tags. So, in the Posts_Tags table there are 3 rows. How can I access the table Posts_Tags directly in my code so that I can manipulate the data or add some more fields to it.

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• Research idea in simulation

  - by Nilani Algiriyage

  Hi, I'm an undergraduate in University of Keleniya,Sri Lanka. I'm interested in doing a research on BPM, BPMN. But I have very few knowledgeable people and very few resources in my country. My supervisor also doesn't have enough knowledge in this area. So if you can please help me to find a research topic in BPM or BPMN. At least please help me to get an idea what areas I can do? Thank you very much. Regards, Nilani.

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• Would you hire a foreigner ? [closed]

  - by user229999

  Hi! I'd like to dedicate this question (hope it's not a subjective) especially to people who own their companies. Would you (and why) hire a foreigner, which experience is documented in CV and portfolio, which can communicate in english (with grammar mistakes, but still)? I am writing in the name of all these guys looking for great opportunities abroad, living in countries which do not give you any opportunities at all. Is it real, to be hired like a programmer (PHP, Ruby, Python, C#) in country like UK, USA, Nederland, Sweeden or even Germany, if you're a foreigner? Please response in two categories: a) foreigner with engineer degree, zend certificate, few open source projects b) foreigner without any degree, with nice portfolio, and few big projects created Also, does First Certificate in English aka FCE matter for you ?

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• Pointing to array element

  - by regular

  What I'm trying to achieve is say i have an array, i want to be able to modify a specific array element throughout my code, by pointing at it. for example in C++ i can do this int main(){ int arr [5]= {1,2,3,4,5}; int *c = &arr[3]; cout << arr[3] <<endl; *c = 0; cout << arr[3]<<endl; } I did some googling and there seems to be a way to do it through 'unsafe', but i don't really want to go that route. I guess i could create a variable to store the indexes, but I'm actually dealing with slightly more complexity (a list within a list. so having two index variables seems to add complexity to the code.) C# has a databinding class, so what I'm currently doing is binding the array element to a textbox (that i have hidden) and modifying that textbox whenever i want to modify the specific array element, but that's also not a good solution (since i have a textbox that's not being used for its intended purpose - a bit misleading).

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• Help me for creating huge database in Mysql

  - by user90552

  We are building a website for business on global wise, for every country major cities are covered in this concept. I need some suggestions from PHP Mysql People. Can i create single databse for all cities or multiple databases. Because in this system contains some relations between cities ,every chamber need nearly 50 tables for networking and some other tables. If I can create separate databases for every chamber there would be nearly 50*1000 tables need because we have 1000 cities. So Please give suggestions how can i build database for my system. Thank you Ravi

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• How can I figure out a users postal code if I have their latitude / longitude location? Need help w

  - by mike

  I'm using HTML5 geolocation to collect the users lat / long and I need to figure out what their postal code is as well. I have a database of all the lat / long for each postal code in the US & Canada. How can I write a query to find out what their postal code is? Below, is an example of how the data is structured in the 'zips' table. Country PostalCode Latitude Longitude USA 0051 40.813078 -73.046388 USA 00616 18.426456 -66.673779 I can't do a 'SELECT PostalCode FROM zips WHERE Latitude = user.lat AND Longitude = user.long'. I believe I need to find the nearest lat / long. Any suggestions on how I can write this?

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• Real-Time Data Streaming to Multiple Clients

  - by AriX

  Hi all, I would like to write an application which will stream data at 2400 baud over the internet from a server to multiple clients. The data will be the same for each client, and it would probably be fine to send it as a UDP stream, since exact data accuracy is not a 100% necessity, as there are checksums built-in to the data format and the data will be sent repeatedly on a loop. What is the best way to do this? I would want to write the server in C, but I don't know how to best multicast this data to the different clients that would be receiving it all over the country. I'm sure this seems like a pretty draconian way to go about my project, as opposed to just using some sort of fetch command, but I'd prefer to do it this way if possible.

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