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  • Asynchronous COMET query with Tornado and Prototype

    - by grundic
    Hello everyone. I'm trying to write simple web application using Tornado and JS Prototype library. So, the client can execute long running job on server. I wish, that this job runs Asynchronously - so that others clients could view page and do some stuff there. Here what i've got: #!/usr/bin/env/ pytthon import tornado.httpserver import tornado.ioloop import tornado.options import tornado.web from tornado.options import define, options import os import string from time import sleep from datetime import datetime define("port", default=8888, help="run on the given port", type=int) class MainHandler(tornado.web.RequestHandler): def get(self): self.render("templates/index.html", title="::Log watcher::", c_time=datetime.now()) class LongHandler(tornado.web.RequestHandler): @tornado.web.asynchronous def get(self): self.wait_for_smth(callback=self.async_callback(self.on_finish)) print("Exiting from async.") return def wait_for_smth(self, callback): t=0 while (t < 10): print "Sleeping 2 second, t={0}".format(t) sleep(2) t += 1 callback() def on_finish(self): print ("inside finish") self.write("Long running job complete") self.finish() def main(): tornado.options.parse_command_line() settings = { "static_path": os.path.join(os.path.dirname(__file__), "static"), } application = tornado.web.Application([ (r"/", MainHandler), (r"/longPolling", LongHandler) ], **settings ) http_server = tornado.httpserver.HTTPServer(application) http_server.listen(options.port) tornado.ioloop.IOLoop.instance().start() if __name__ == "__main__": main() This is server part. It has main view (shows little greeting, current server time and url for ajax query, that executes long running job. If you press a button, a long running job executes. And server hangs :( I can't view no pages, while this job is running. Here is template page: <html> <head> <title>{{ title }}</title> <script type="text/javascript" language="JavaScript" src="{{ static_url("js/prototype.js")}}"></script> <script type='text/javascript' language='JavaScript'> offset=0 last_read=0 function test(){ new Ajax.Request("http://172.22.22.22:8888/longPolling", { method:"get", asynchronous:true, onSuccess: function (transport){ alert(transport.responseText); } }) } </script> </head> <body> Current time is {{c_time}} <br> <input type="button" value="Test" onclick="test();"/> </body> </html> what am I doing wrong? How can implement long pooling, using Tornado and Prototype (or jQuery) PS: I have looked at Chat example, but it too complicated. Can't understand how it works :( PSS Download full example

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  • Yesterday's broken codebase hunt me back

    - by sandun dhammika
    I need a fun oky. I just love this openmoko hardware and hacking into it. Please could somebody help me to compile qemu.I 'm so sad and I want to compile qemu and it required the GCC3.x and then I downloaded gcc 3.2 but when I configure it and build it, it gives a very sad error message. G_FOR_TARGET=" "SHELL=/bin/sh" "EXPECT=expect" "RUNTEST=runtest" "RUNTESTFLAGS=" "exec_prefix=/gcc-3.2" "infodir=/gcc-3.2/info" "libdir=/gcc-3.2/lib" "prefix=/gcc-3.2" "tooldir=/gcc-3.2/i686-pc-linux-gnu" "AR=ar" "AS=as" "CC=gcc" "CXX=c++" "LD=ld" "LIBCFLAGS=-g -O2" "NM=nm" "PICFLAG=" "RANLIB=ranlib" "DESTDIR=" DO=all multi-do make[1]: Leaving directory `/gcc-3.2/gcc-3.2/zlib' make[1]: Entering directory `/gcc-3.2/gcc-3.2/fastjar' make[1]: Leaving directory `/gcc-3.2/gcc-3.2/fastjar' make[1]: Entering directory `/gcc-3.2/gcc-3.2/gcc' gcc -c -DIN_GCC -g -O2 -W -Wall -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wtraditional -pedantic -Wno-long-long -DHAVE_CONFIG_H -DGENERATOR_FILE -I. -I. -I. -I./. -I./config -I./../include ./read-rtl.c -o read-rtl.o In file included from ./read-rtl.c:24:0: ./rtl.h:125:3: warning: type of bit-field ‘code’ is a GCC extension ./rtl.h:128:3: warning: type of bit-field ‘mode’ is a GCC extension ./read-rtl.c: In function ‘fatal_with_file_and_line’: ./read-rtl.c:61:1: warning: traditional C rejects ISO C style function definitions ./read-rtl.c: In function ‘read_rtx’: ./read-rtl.c:662:8: error: lvalue required as increment operand make[1]: *** [read-rtl.o] Error 1 make[1]: Leaving directory `/gcc-3.2/gcc-3.2/gcc' make: *** [all-gcc] Error 2 This is so sad and this is sooo bad. I have searched patches and workaround all over the Internet to this,but I couldn't find any alternative for this. I'm out of my patience now. I want that virtual machine ready and I want to make a debug host cos I don't have some money to buy original neo 1937 hardware. The patch that I have found comes with a nasty error too. I'm so sick of it.Any idea how could I fix this problem and make this work? Please please I'm begging you somebody help me please. Thanks all.

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  • I am trying to deploy my first rails app using Capistrano and am getting an error.

    - by Andrew Bucknell
    My deployment of a rails app with capistrano is failing and I hoping someone can provide me with pointers to troubleshoot. The following is the command output andrew@melb-web:~/projects/rails/guestbook2$ cap deploy:setup * executing `deploy:setup' * executing "mkdir -p /var/www/dev/guestbook2 /var/www/dev/guestbook2/releases /var/www/dev/guestbook2/shared /var/www/dev/guestbook2/shared/system /var/www/dev/guestbook2/shared/log /var/www/dev/guestbook2/shared/pids && chmod g+w /var/www/dev/guestbook2 /var/www/dev/guestbook2/releases /var/www/dev/guestbook2/shared /var/www/dev/guestbook2/shared/system /var/www/dev/guestbook2/shared/log /var/www/dev/guestbook2/shared/pids" servers: ["dev.andrewbucknell.com"] Enter passphrase for /home/andrew/.ssh/id_dsa: Enter passphrase for /home/andrew/.ssh/id_dsa: [dev.andrewbucknell.com] executing command command finished andrew@melb-web:~/projects/rails/guestbook2$ cap deploy:check * executing `deploy:check' * executing "test -d /var/www/dev/guestbook2/releases" servers: ["dev.andrewbucknell.com"] Enter passphrase for /home/andrew/.ssh/id_dsa: [dev.andrewbucknell.com] executing command command finished * executing "test -w /var/www/dev/guestbook2" servers: ["dev.andrewbucknell.com"] [dev.andrewbucknell.com] executing command command finished * executing "test -w /var/www/dev/guestbook2/releases" servers: ["dev.andrewbucknell.com"] [dev.andrewbucknell.com] executing command command finished * executing "which git" servers: ["dev.andrewbucknell.com"] [dev.andrewbucknell.com] executing command command finished * executing "test -w /var/www/dev/guestbook2/shared" servers: ["dev.andrewbucknell.com"] [dev.andrewbucknell.com] executing command command finished You appear to have all necessary dependencies installed andrew@melb-web:~/projects/rails/guestbook2$ cap deploy:migrations * executing `deploy:migrations' * executing `deploy:update_code' updating the cached checkout on all servers executing locally: "git ls-remote [email protected]:/home/andrew/git/guestbook2.git master" Enter passphrase for key '/home/andrew/.ssh/id_dsa': * executing "if [ -d /var/www/dev/guestbook2/shared/cached-copy ]; then cd /var/www/dev/guestbook2/shared/cached-copy && git fetch origin && git reset --hard 369c5e04aaf83ad77efbfba0141001ac90915029 && git clean -d -x -f; else git clone [email protected]:/home/andrew/git/guestbook2.git /var/www/dev/guestbook2/shared/cached-copy && cd /var/www/dev/guestbook2/shared/cached-copy && git checkout -b deploy 369c5e04aaf83ad77efbfba0141001ac90915029; fi" servers: ["dev.andrewbucknell.com"] Enter passphrase for /home/andrew/.ssh/id_dsa: [dev.andrewbucknell.com] executing command ** [dev.andrewbucknell.com :: err] Permission denied, please try again. ** Permission denied, please try again. ** Permission denied (publickey,password). ** [dev.andrewbucknell.com :: err] fatal: The remote end hung up unexpectedly ** [dev.andrewbucknell.com :: out] Initialized empty Git repository in /var/www/dev/guestbook2/shared/cached-copy/.git/ command finished failed: "sh -c 'if [ -d /var/www/dev/guestbook2/shared/cached-copy ]; then cd /var/www/dev/guestbook2/shared/cached-copy && git fetch origin && git reset --hard 369c5e04aaf83ad77efbfba0141001ac90915029 && git clean -d -x -f; else git clone [email protected]:/home/andrew/git/guestbook2.git /var/www/dev/guestbook2/shared/cached-copy && cd /var/www/dev/guestbook2/shared/cached-copy && git checkout -b deploy 369c5e04aaf83ad77efbfba0141001ac90915029; fi'" on dev.andrewbucknell.com andrew@melb-web:~/projects/rails/guestbook2$ The following fragment is from cap -d deploy:migrations Preparing to execute command: "find /var/www/dev/guestbook2/releases/20100305124415/public/images /var/www/dev/guestbook2/releases/20100305124415/public/stylesheets /var/www/dev/guestbook2/releases/20100305124415/public/javascripts -exec touch -t 201003051244.22 {} ';'; true" Execute ([Yes], No, Abort) ? |y| yes * executing `deploy:migrate' * executing "ls -x /var/www/dev/guestbook2/releases" Preparing to execute command: "ls -x /var/www/dev/guestbook2/releases" Execute ([Yes], No, Abort) ? |y| yes /usr/lib/ruby/gems/1.8/gems/capistrano-2.5.17/lib/capistrano/recipes/deploy.rb:55:in `join': can't convert nil into String (TypeError) from /usr/lib/ruby/gems/1.8/gems/capistrano-2.5.17/lib/capistrano/recipes/deploy.rb:55:in `load'

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  • Snow Leopard upgrade -> reinstalling sqlite3-ruby gem problem

    - by Carl Tessler
    Hi all, I got ruby 1.8.7 (native compiled), rails 2.3.4, OSX 10.6.2 and also sqlite3-ruby. The error I'm getting when accessing the rails app is NameError: uninitialized constant SQLite3::Driver::Native::Driver::API History: I upgraded to snow leopard by migrating my apps with a FW-cable from my old macbook to the new one. Everything was running perfectly for months, but Yesterday I needed to install watir, which was dependant on rb-appscript, which didn't build due a "wrong architecture" error in libsqlite3.dylib. I figured the build was made on the old machine, so i wanted to rebuild sqlite3-ruby: $ sudo gem uninstall sqlite3-ruby $ sudo gem install sqlite3-ruby Building native extensions. This could take a while... ERROR: Error installing sqlite3-ruby: ERROR: Failed to build gem native extension. /usr/local/bin/ruby extconf.rb checking for fdatasync() in -lrt... no checking for sqlite3.h... yes checking for sqlite3_open() in -lsqlite3... no * extconf.rb failed * Could not create Makefile due to some reason, probably lack of necessary libraries and/or headers. Check the mkmf.log file for more details. You may need configuration options. It seems like the sqlite3 libs are not working properly. I've tried to install macports sqlite3 (sudo port install sqlite3) and use that instead, but with same result... so i rebuild sqlite3 from scratch.. download-configure-make-make install. After that, the gem now builds perfectly, but doesn't work in rails, giving the error in the top of this article. I'm not really sure where to go from here because I've tried the following Rebuild sqlite3 from newest source (http://www.sqlite.org/download.html) Reinstalled sqlite3-ruby (sudo gem uninstall sqlite3-ruby && sudo gem install sqlite3-ruby) Used sqlite3 from macports (sudo port install sqlite3 && sudo gem install sqlite3-ruby) Reinstalled rails (sudo gem install rails sqlite3-ruby ) and updated environment.rb to rails 2.3.5. No avail, I still get this error: NameError: uninitialized constant SQLite3::Driver::Native::Driver::AP from /usr/local/lib/ruby/gems/1.8/gems/activesupport-2.3.5/lib/active_support/dependencies.rb:105:in const_missing' from /usr/local/lib/ruby/gems/1.8/gems/sqlite3-ruby-1.2.5/lib/sqlite3/driver/native/driver.rb:76:in open' from /usr/local/lib/ruby/gems/1.8/gems/sqlite3-ruby-1.2.5/lib/sqlite3/database.rb:76:in `initialize' Btw, I have Xcode installed from the Snow Leopard CD. What can i do to solve the problem?

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  • sqlite3-ruby can't make on rvm 1.8.7

    - by Josh Crews
    Upgrading to Rails 3 by starting with RVM 1.8.7. OSX 10.5.8 Output: josh-crewss-macbook:~ joshcrews$ gem install sqlite3-rubyBuilding native extensions. This could take a while...ERROR: Error installing sqlite3-ruby: ERROR: Failed to build gem native extension. /Users/joshcrews/.rvm/rubies/ruby-1.8.7-p174/bin/ruby extconf.rb checking for sqlite3.h... yes checking for sqlite3_libversion_number() in -lsqlite3... yes checking for rb_proc_arity()... no checking for sqlite3_column_database_name()... no checking for sqlite3_enable_load_extension()... no checking for sqlite3_load_extension()... no creating Makefile make gcc -I. -I. -I/Users/joshcrews/.rvm/rubies/ruby-1.8.7-p174/lib/ruby/1.8/i686-darwin9.8.0 -I. -I/usr/local/include -I/opt/local/include -I/usr/include -D_XOPEN_SOURCE -D_DARWIN_C_SOURCE -fno-common -g -O2 -fno-common -pipe -fno-common -O3 -Wall -Wcast-qual -Wwrite-strings -Wconversion -Wmissing-noreturn -Winline -c database.c database.c: In function ‘deallocate’: database.c:17: warning: implicit declaration of function ‘sqlite3_next_stmt’ database.c:17: warning: assignment makes pointer from integer without a cast database.c: In function ‘initialize’: database.c:76: warning: implicit declaration of function ‘sqlite3_open_v2’ database.c:79: error: ‘SQLITE_OPEN_READWRITE’ undeclared (first use in this function) database.c:79: error: (Each undeclared identifier is reported only once database.c:79: error: for each function it appears in.) database.c:79: error: ‘SQLITE_OPEN_CREATE’ undeclared (first use in this function) database.c: In function ‘set_sqlite3_func_result’: database.c:277: error: ‘sqlite3_int64’ undeclared (first use in this function) database.c: In function ‘rb_sqlite3_func’: database.c:311: warning: passing argument 1 of ‘ruby_xcalloc’ as signed due to prototype database.c: In function ‘rb_sqlite3_step’: database.c:378: warning: passing argument 1 of ‘ruby_xcalloc’ as signed due to prototype make: *** [database.o] Error 1 Gem list (these are under RVM, under system I've got lot more gems included the sqlite3-ruby that's worked for 1.5 years) josh-crewss-macbook:~ joshcrews$ gem list *** LOCAL GEMS *** abstract (1.0.0) actionmailer (3.0.0.beta3) actionpack (3.0.0.beta3) activemodel (3.0.0.beta3) activerecord (3.0.0.beta3) activeresource (3.0.0.beta3) activesupport (3.0.0.beta3, 2.3.8) arel (0.3.3) builder (2.1.2) bundler (0.9.25) capybara (0.3.8) configuration (1.1.0) cucumber (0.7.2) cucumber-rails (0.3.1) culerity (0.2.10) database_cleaner (0.5.2) diff-lcs (1.1.2) erubis (2.6.5) ffi (0.6.3) gherkin (1.0.30) i18n (0.4.0, 0.3.7) json_pure (1.4.3) launchy (0.3.5) mail (2.2.1) memcache-client (1.8.3) mime-types (1.16) nokogiri (1.4.2) polyglot (0.3.1) rack (1.1.0) rack-mount (0.6.3) rack-test (0.5.4) rails (3.0.0.beta3) railties (3.0.0.beta3) rake (0.8.7) rdoc (2.5.8) rspec (2.0.0.beta.10, 2.0.0.beta.8) rspec-core (2.0.0.beta.10, 2.0.0.beta.8) rspec-expectations (2.0.0.beta.10, 2.0.0.beta.8) rspec-mocks (2.0.0.beta.10, 2.0.0.beta.8) rspec-rails (2.0.0.beta.10, 2.0.0.beta.8) rubygems-update (1.3.7) selenium-webdriver (0.0.20) spork (0.8.3) term-ansicolor (1.0.5) text-format (1.0.0) text-hyphen (1.0.0) thor (0.13.6) treetop (1.4.8) trollop (1.16.2) tzinfo (0.3.22) webrat (0.7.1) Version of XCode: 3.1.1 My suspicion is it has to do with "-I/Users/joshcrews/.rvm/rubies/ruby-1.8.7-p174/lib/ruby/1.8/i686-darwin9.8.0", because i686-darwin9.8.0 doesnt exist in that file

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  • javamail:username password not accepted

    - by bobby
    i get this error when i try to send a mail using javamail api,im sure that the code is correct and username and password are 100% correct,and the gmail account which im connecting is an older account(bcoz they say it takes time for it to work with new account) DEBUG SMTP RCVD: 535-5.7.1 Username and Password not accepted. Learn more at 535 5.7.1 http://mail.google.com/support/bin/answer.py?answer=14257 x35sm3011668 wfh.6 javax.mail.SendFailedException: Sending failed; nested exception is: javax.mail.AuthenticationFailedException at javax.mail.Transport.send0(Transport.java:218) at javax.mail.Transport.send(Transport.java:80) at Main.(Main.java:41) at Main.main(Main.java:51) and this is my code: import javax.mail.*; import javax.mail.internet.*; import java.util.*; public class Main { String d_email = "[email protected]", d_password = "pass", d_host = "smtp.gmail.com", d_port = "465", m_to = "[email protected]", m_subject = "Testing", m_text = "testing email."; public Main() { Properties props = new Properties(); props.put("mail.smtp.user", d_email); props.put("mail.smtp.host", d_host); props.put("mail.smtp.port", d_port); props.put("mail.smtp.starttls.enable","true"); props.put("mail.smtp.auth", "true"); props.put("mail.smtp.debug", "true"); props.put("mail.smtp.socketFactory.port", d_port); props.put("mail.smtp.socketFactory.class", "javax.net.ssl.SSLSocketFactory"); props.put("mail.smtp.socketFactory.fallback", "false"); SecurityManager security = System.getSecurityManager(); try { Authenticator auth = new SMTPAuthenticator(); Session session = Session.getInstance(props, auth); session.setDebug(true); MimeMessage msg = new MimeMessage(session); msg.setText(m_text); msg.setSubject(m_subject); msg.setFrom(new InternetAddress(d_email)); msg.addRecipient(Message.RecipientType.TO, new InternetAddress(m_to)); Transport.send(msg); } catch (Exception mex) { mex.printStackTrace(); } } public static void main(String[] args) { Main blah = new Main(); } private class SMTPAuthenticator extends javax.mail.Authenticator { public PasswordAuthentication getPasswordAuthentication() { return new PasswordAuthentication(d_email, d_password); } } }

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  • Running a Java program with a .dll from Adobe AIR's native process

    - by Donny
    I would like to be able to operate a scanner from my AIR application. Since there's no support for this natively, I'm trying to use the NativeProcess class to start a jar file that can run the scanner. The Java code is using the JTwain library to operate the scanner. The Java application runs fine by itself, and the AIR application can start and communicate with the Java application. The problem seems to be that any time I attempt to use a function from JTwain (which relies on the JTwain.dll), the application dies IF AIR STARTED IT. I'm not sure if there's some limit about referencing dll files from the native process or what. I've included my code below Java code- while(true) { try { System.out.println("Start"); text = in.readLine(); Source source = SourceManager.instance().getCurrentSource(); System.out.println("Java says: "+ text); } catch (IOException e) { System.err.println("Exception while reading the input. " + e); } catch (Exception e) { System.out.println("Other exception occured: " + e.toString()); } finally { } } } Air application- import mx.events.FlexEvent; private var nativeProcess:NativeProcess; private var npInfo:NativeProcessStartupInfo; private var processBuffer:ByteArray; private var bLength:int = 0; protected function windowedapplication1_applicationCompleteHandler(event:FlexEvent):void { var arg:Vector.<String> = new Vector.<String>; arg.push("-jar"); arg.push(File.applicationDirectory.resolvePath("Hello2.jar").nativePath); processBuffer = new ByteArray; npInfo = new NativeProcessStartupInfo; npInfo.executable = new File("C:/Program Files/Java/jre6/bin/javaw.exe"); npInfo.arguments = arg; nativeProcess = new NativeProcess; nativeProcess.addEventListener(ProgressEvent.STANDARD_OUTPUT_DATA, onStandardOutputData); nativeProcess.start(npInfo); } private function onStandardOutputData(e:ProgressEvent):void { tArea.text += nativeProcess.standardOutput.readUTFBytes(nativeProcess.standardOutput.bytesAvailable); } protected function button1_clickHandler(event:MouseEvent):void { tArea.text += 'AIR app: '+tInput.text + '\n'; nativeProcess.standardInput.writeMultiByte(tInput.text + "\n", 'utf-8'); tInput.text = ''; } protected function windowedapplication1_closeHandler(event:Event):void { nativeProcess.closeInput(); } ]]> </fx:Script> <s:Button label="Send" x="221" y="11" click="button1_clickHandler(event)"/> <s:TextInput id="tInput" x="10" y="10" width="203"/> <s:TextArea id="tArea" x="10" width="282" height="88" top="40"/> I would love some explanation about why this is dying. I've done enough testing that I know absolutely that the line that kills it is the SourceManager.instance().getCurrentSource(). I would love any suggestions. Thanks.

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  • "Bad binary signature" in ASP.NET MVC application

    - by David M
    We are getting the error above on some pages of an ASP.NET MVC application when it is deployed to a 64 bit Windows 2008 server box. It works fine on our development machines, though these are 32 bit XP. Just wondered if anyone had encountered this before, and has any suggestions? Details as follows: Bad binary signature. (Exception from HRESULT: 0x80131192) Description: An unhandled exception occurred during the execution of the current web request. Please review the stack trace for more information about the error and where it originated in the code. Exception Details: System.Runtime.InteropServices.COMException: Bad binary signature. (Exception from HRESULT: 0x80131192) All projects are set to compile for Any CPU, and are compiled in Release mode. The ASP.NET site is precompiled, and the precompiled build is on a 64 bit Windows 2008 TeamCity build agent. Thanks in advance. EDIT We're still plagued by this. I have looked at all the binaries in the website's bin directory using corflags.exe. None has the 32BIT flag set, and all have a CorFlags value of 9 except for Antlr3.Runtime.dll which has a value of 1. The problem only affects certain pages, and it seems to be those which use FluentValidation (including FluentValidation.Mvc and FluentValidation.xValIntegration assemblies). None of these shows anything out of the ordinary when inspected with corflags.exe, and there are no odd looking dependencies revealed by ildasm. When built locally (32 bit Windows XP) the site deploys and runs fine. When built on the build agents (64 bit Windows 2008 Server) the site displays these errors. The site runs in Integrated Pipeline mode, and is not set to 32 bit. The stack trace is: [COMException (0x80131192): Bad binary signature. (Exception from HRESULT: 0x80131192)] ASP.views_user_newinternal_aspx.__RenderContent2(HtmlTextWriter __w, Control parameterContainer) in e:\TeamCity\buildAgent\work\605ee6b4a5d1dd36\...Admin.Mvc\Views\User\NewInternal.aspx:53 System.Web.UI.Control.RenderChildrenInternal(HtmlTextWriter writer, ICollection children) +115 ASP.views_shared_site_master.__Render__control1(HtmlTextWriter __w, Control parameterContainer) in e:\TeamCity\buildAgent\work\605ee6b4a5d1dd36\...Admin.Mvc\Views\Shared\Site.Master:26 System.Web.UI.Control.RenderChildrenInternal(HtmlTextWriter writer, ICollection children) +115 System.Web.UI.Control.RenderChildrenInternal(HtmlTextWriter writer, ICollection children) +240 System.Web.UI.Page.Render(HtmlTextWriter writer) +38 System.Web.Mvc.ViewPage.Render(HtmlTextWriter writer) +94 System.Web.UI.Page.ProcessRequestMain(Boolean includeStagesBeforeAsyncPoint, Boolean includeStagesAfterAsyncPoint) +4240

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  • Are PackageMaker installations with preinstall scripts broken on Snow Leopard?

    - by Stu Thompson
    Everything worked on 10.5, but now my PackageMaker installation project is broken. I've been fighting a problem for a few days now, and either Snow Leopard (OS X 10.6.1) has broken PackageMaker installations I am lacking a very, very basic tidbit of knowledge To narrow down the problem, I've gotten to this point: Create a new PackageMaker installation Have it install a jpeg image into my home directoy Define a preinstall script that does nothing #/bin/sh exit 0 Run the above...and watch it fail with the below error message like clock work Sep 14 15:09:45 manoa installd[5620]: PackageKit: ----- Begin install ----- Sep 14 15:09:45 manoa installd[5620]: PackageKit: request=PKInstallRequest <1 packages, destination=/> Sep 14 15:09:45 manoa installd[5620]: PackageKit: packages=(\n "PKLeopardPackage <file://localhost/Users/stu/Desktop/asdf.pkg>"\n) Sep 14 15:09:46 manoa installd[5620]: PackageKit: Extracting /Users/stu/Desktop/asdf.pkg (destination=/var/folders/Hb/HbXJFyEpFaupt5QyLN-pTk+++TI/-Tmp-/PKInstallSandbox-tmp/Root/~, uid=501) Sep 14 15:09:46 manoa installd[5620]: PackageKit: Executing script "./preinstall" in /private/tmp/PKInstallSandbox.cmlS2H/Scripts/test.test.5year_header.pkg.PFrHNB Sep 14 15:09:46 manoa installd[5620]: PackageKit: *** launch path not accessible Sep 14 15:09:46 manoa installd[5620]: PackageKit: Install Failed: PKG: pre-install scripts for "test.test.5year_header.pkg"\nError Domain=PKInstallErrorDomain Code=112 UserInfo=0x100149430 "An error occurred while running scripts from the package “asdf”." {\n NSFilePath = "./preinstall";\n NSLocalizedDescription = "An error occurred while running scripts from the package \U201casdf\U201d.";\n NSURL = "file://localhost/Users/stu/Desktop/asdf.pkg";\n PKInstallPackageIdentifier = "test.test.5year_header.pkg";\n} Sep 14 15:09:46 manoa Installer[5614]: install:didFailWithError:Error Domain=PKInstallErrorDomain Code=112 UserInfo=0x1195917c0 "An error occurred while running scripts from the package “asdf”." Sep 14 15:09:46 manoa Installer[5614]: Install failed: The Installer encountered an error that caused the installation to fail. Contact the software manufacturer for assistance. Sep 14 15:09:47 manoa Installer[5614]: IFDInstallController 144040 state = 7 Sep 14 15:09:47 manoa Installer[5614]: Displaying 'Install Failed' UI. Sep 14 15:09:47 manoa Installer[5614]: 'Install Failed' UI displayed message:'The Installer encountered an error that caused the installation to fail. Contact the software manufacturer for assistance.'. There is no file in /private/tmp/PKInstallSandbox.cmlS2H/Scripts/test.test.5year_header.pkg.PFrHNB/, which makes me think the problem is with PackageMaker, and not me. But I'm new to the world of OS X software installation, so doubts remain. So, the question: Is PackageMaker with a preinstall script broken on OS X 10.6? Or is there some requirement regarding preinstall scripts that I do not understand?

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  • TeamCity MSBuild 4.0 Help

    - by ChrisKolenko
    Hi guys, I need some help with my MSBuild file i created a while ago. All i want to do is build the solution, publish a project inside the solution and than copy the files to a directory At the moment when i set Teamcity to .net 4 msbuild, msbuild 4.0 tools and for 86 i get an error stating error MSB4067: The element beneath element is unrecognized. <?xml version="1.0" encoding="utf-8" ?> <Project xmlns="http://schemas.microsoft.com/developer/msbuild/2003" DefaultTargets="Run"> <Import Project="$(MSBuildExtensionsPath)\MSBuildCommunityTasks\MSBuild.Community.Tasks.Targets"/> <Import Project="$(MSBuildExtensionsPath)\Microsoft\VisualStudio\v10.0\WebApplications\Microsoft.WebApplication.targets"/> <PropertyGroup> <OutputFolder>$(OutputDir)</OutputFolder> <DeploymentFolder>$(DeploymentDir)</DeploymentFolder> <CompilationDebug /> <CustomErrorsMode /> <ContentEditorsEmail /> <AdministratorsEmail /> </PropertyGroup> <Target Name="Run"> <CallTarget Targets="Compile" /> <CallTarget Targets="Publish" /> <CallTarget Targets="Deploy" /> </Target> <Target Name="Clean"> <ItemGroup> <BinFiles Include="bin\*.*" /> </ItemGroup> <Delete Files="@(BinFiles)" /> </Target> <Target Name="Compile" DependsOnTargets="Clean"> <MSBuild Projects="WebCanvas.ZakisCatering.Website.sln" Properties="Configuration=Release"/> </Target> <Target Name="Publish"> <RemoveDir Directories="$(OutputFolder)" ContinueOnError="true" /> <MSBuild Projects="WebCanvas.ZakisCatering.Website\WebCanvas.ZakisCatering.Website.csproj" Targets="ResolveReferences;_CopyWebApplication" Properties="Configuration=Release;WebProjectOutputDir=$(OutputFolder);OutDir=$(WebProjectOutputDir)\" /> </Target> <Target Name="Deploy"> <RemoveDir Directories="$(DeploymentFolder)" ContinueOnError="true" /> <ItemGroup> <DeploymentFiles Include="$(OutputFolder)\**\*.*" /> </ItemGroup> <Copy SourceFiles="@(DeploymentFiles)" DestinationFolder="$(DeploymentFolder)\%(RecursiveDir)" /> </Target> </Project>

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  • OperationalError "unable to open database file" processing query results with SQLAlchemy and SQLite3

    - by Peter
    I'm running into this little problem that I hope is just a dumb user error. It looks like some sort of a size limit with a query to a SQLite database. I managed to reproduce the issue with an in-memory DB and a simple script shown below. I can make it work by either reducing the number of records in the DB; or by reducing the size of each record; or by dropping the order_by() call. I am using Python 2.5.5 and SQLAlchemy 0.6.0 in a Cygwin environment. Thanks! #!/usr/bin/python from sqlalchemy.orm import sessionmaker import sqlalchemy import sqlalchemy.orm class Person(object): def __init__(self, name): self.name = name engine = sqlalchemy.create_engine('sqlite:///:memory:') Session = sessionmaker(bind=engine) metadata = sqlalchemy.schema.MetaData(bind=engine) person_table = sqlalchemy.Table('person', metadata, sqlalchemy.Column('id', sqlalchemy.types.Integer, primary_key=True), sqlalchemy.Column('name', sqlalchemy.types.String)) metadata.create_all(engine) sqlalchemy.orm.mapper(Person, person_table) session = Session() session.add_all([Person("012345678901234567890123456789012") for i in range(5000)]) session.commit() persons = session.query(Person).order_by(Person.name).all() print "count =", len(persons) session.close() The all() call to the query result fails with the OperationalError exception: Traceback (most recent call last): File "./stress.py", line 27, in <module> persons = session.query(Person).order_by(Person.name).all() File "/usr/lib/python2.5/site-packages/sqlalchemy/orm/query.py", line 1343, in all return list(self) File "/usr/lib/python2.5/site-packages/sqlalchemy/orm/query.py", line 1451, in __iter__ return self._execute_and_instances(context) File "/usr/lib/python2.5/site-packages/sqlalchemy/orm/query.py", line 1456, in _execute_and_instances mapper=self._mapper_zero_or_none()) File "/usr/lib/python2.5/site-packages/sqlalchemy/orm/session.py", line 737, in execute clause, params or {}) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/base.py", line 1109, in execute return Connection.executors[c](self, object, multiparams, params) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/base.py", line 1186, in _execute_clauseelement return self.__execute_context(context) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/base.py", line 1215, in __execute_context context.parameters[0], context=context) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/base.py", line 1284, in _cursor_execute self._handle_dbapi_exception(e, statement, parameters, cursor, context) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/base.py", line 1282, in _cursor_execute self.dialect.do_execute(cursor, statement, parameters, context=context) File "/usr/lib/python2.5/site-packages/sqlalchemy/engine/default.py", line 277, in do_execute cursor.execute(statement, parameters) sqlalchemy.exc.OperationalError: (OperationalError) unable to open database file u'SELECT person.id AS person_id, person.name AS person_name \nFROM person ORDER BY person.name' ()

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  • Installing Monodevelop from the SVN on Ubuntu 10.04

    - by celil
    I wrote the following script to install the svn version of MonoDevelop #!/usr/bin/env bash PREFIX=/opt/local check_errs() { if [[ $? -ne 0 ]]; then echo "${1}" exit 1 fi } download() { if [ ! -d ${1} ] then svn co http://anonsvn.mono-project.com/source/trunk/${1} else (cd ${1}; svn update) fi } download mono download mcs download libgdiplus ( cd mono ./autogen.sh --prefix=$PREFIX make make install check_errs ) ( cd libgdiplus ./autogen.sh --prefix=$PREFIX make make install check_errs ) download monodevelop export PKG_CONFIG_PATH=${PREFIX}/lib/pkgconfig ( cd monodevelop ./configure --prefix=$PREFIX --select check_errs make check_errs ) Everything works fine until the last make step for the monodevelop pacakge, where the script exits with the error: ./MonoDevelop.WebReferences/MoonlightChannelBaseExtension.cs(320,82): error CS1061: Type `System.ServiceModel.Description.OperationContractGenerationContext' does not contain a definition for `SyncMethod' and no extension method `SyncMethod' of type `System.ServiceModel.Description.OperationContractGenerationContext' could be found (are you missing a using directive or an assembly reference?) ./MonoDevelop.WebReferences/MoonlightChannelBaseExtension.cs(325,49): error CS1061: Type `System.ServiceModel.Description.OperationContractGenerationContext' does not contain a definition for `SyncMethod' and no extension method `SyncMethod' of type `System.ServiceModel.Description.OperationContractGenerationContext' could be found (are you missing a using directive or an assembly reference?) ./MonoDevelop.WebReferences/MoonlightChannelBaseExtension.cs(345,115): error CS1061: Type `System.ServiceModel.Description.OperationContractGenerationContext' does not contain a definition for `SyncMethod' and no extension method `SyncMethod' of type `System.ServiceModel.Description.OperationContractGenerationContext' could be found (are you missing a using directive or an assembly reference?) ./MonoDevelop.WebReferences/MoonlightChannelBaseExtension.cs(365,82): error CS1061: Type `System.ServiceModel.Description.OperationContractGenerationContext' does not contain a definition for `BeginMethod' and no extension method `BeginMethod' of type `System.ServiceModel.Description.OperationContractGenerationContext' could be found (are you missing a using directive or an assembly reference?) Compilation failed: 4 error(s), 1 warnings make[4]: *** [../../../build/AddIns/MonoDevelop.WebReferences/MonoDevelop.WebReferences.dll] Error 1 make[4]: Leaving directory `/home/drufat/Desktop/Checkout/mono/monodevelop/main/src/addins/MonoDevelop.WebReferences' make[3]: *** [all-recursive] Error 1 make[3]: Leaving directory `/home/drufat/Desktop/Checkout/mono/monodevelop/main/src/addins' make[2]: *** [all-recursive] Error 1 make[2]: Leaving directory `/home/drufat/Desktop/Checkout/mono/monodevelop/main/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/drufat/Desktop/Checkout/mono/monodevelop/main' make: *** [all-recursive] Error 1 Any ideas on how to fix this? I suppose the build gets mixed up with the default installation of mono in Ubuntu, and is looking for a symbol that is not present there. My build configuration looks as follows: 1. [X] main 2. [ ] extras/JavaBinding 3. [ ] extras/BooBinding 4. [X] extras/ValaBinding 5. [ ] extras/AspNetEdit 6. [ ] extras/GeckoWebBrowser 7. [ ] extras/WebKitWebBrowser 8. [ ] extras/MonoDevelop.Database 9. [ ] extras/MonoDevelop.Profiling 10. [ ] extras/MonoDevelop.AddinAuthoring 11. [ ] extras/MonoDevelop.CodeAnalysis 12. [ ] extras/MonoDevelop.Debugger.Mdb 13. [ ] extras/MonoDevelop.Debugger.Gdb 14. [ ] extras/PyBinding 15. [ ] extras/MonoDevelop.IPhone 16. [ ] extras/MonoDevelop.MeeGo

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  • Error accessing a Web Service with SSL

    - by Elie
    I have a program that is supposed to send a file to a web service, which requires an SSL connection. I run the program as follows: SET JAVA_HOME=C:\Program Files\Java\jre1.6.0_07 SET com.ibm.SSL.ConfigURL=ssl.client.props "%JAVA_HOME%\bin\java" -cp ".;Test.jar" ca.mypackage.Main This was works fine, but when I change the first line to SET JAVA_HOME=C:\Program Files\IBM\SDP\runtimes\base_v7\java\jre I get the following error: com.sun.xml.internal.ws.client.ClientTransportException: HTTP transport error: java.net.SocketException: java.lang.ClassNotFoundException: Cannot find the specified class com.ibm.websphere.ssl.protocol.SSLSocketFactory at com.sun.xml.internal.ws.transport.http.client.HttpClientTransport.getOutput(HttpClientTransport.java:119) at com.sun.xml.internal.ws.transport.http.client.HttpTransportPipe.process(HttpTransportPipe.java:140) at com.sun.xml.internal.ws.transport.http.client.HttpTransportPipe.processRequest(HttpTransportPipe.java:86) at com.sun.xml.internal.ws.api.pipe.Fiber.__doRun(Fiber.java:593) at com.sun.xml.internal.ws.api.pipe.Fiber._doRun(Fiber.java:552) at com.sun.xml.internal.ws.api.pipe.Fiber.doRun(Fiber.java:537) at com.sun.xml.internal.ws.api.pipe.Fiber.runSync(Fiber.java:434) at com.sun.xml.internal.ws.client.Stub.process(Stub.java:247) at com.sun.xml.internal.ws.client.sei.SEIStub.doProcess(SEIStub.java:132) at com.sun.xml.internal.ws.client.sei.SyncMethodHandler.invoke(SyncMethodHandler.java:242) at com.sun.xml.internal.ws.client.sei.SyncMethodHandler.invoke(SyncMethodHandler.java:222) at com.sun.xml.internal.ws.client.sei.SEIStub.invoke(SEIStub.java:115) at $Proxy26.fileSubmit(Unknown Source) at com.testing.TestingSoapProxy.fileSubmit(TestingSoapProxy.java:81) at ca.mypackage.Main.main(Main.java:63) Caused by: java.net.SocketException: java.lang.ClassNotFoundException: Cannot find the specified class com.ibm.websphere.ssl.protocol.SSLSocketFactory at javax.net.ssl.DefaultSSLSocketFactory.a(SSLSocketFactory.java:7) at javax.net.ssl.DefaultSSLSocketFactory.createSocket(SSLSocketFactory.java:1) at com.ibm.net.ssl.www2.protocol.https.c.afterConnect(c.java:110) at com.ibm.net.ssl.www2.protocol.https.d.connect(d.java:14) at sun.net.www.protocol.http.HttpURLConnection.getOutputStream(HttpURLConnection.java:902) at com.ibm.net.ssl.www2.protocol.https.b.getOutputStream(b.java:86) at com.sun.xml.internal.ws.transport.http.client.HttpClientTransport.getOutput(HttpClientTransport.java:107) ... 14 more Caused by: java.lang.ClassNotFoundException: Cannot find the specified class com.ibm.websphere.ssl.protocol.SSLSocketFactory at javax.net.ssl.SSLJsseUtil.b(SSLJsseUtil.java:20) at javax.net.ssl.SSLSocketFactory.getDefault(SSLSocketFactory.java:36) at javax.net.ssl.HttpsURLConnection.getDefaultSSLSocketFactory(HttpsURLConnection.java:16) at javax.net.ssl.HttpsURLConnection.<init>(HttpsURLConnection.java:36) at com.ibm.net.ssl.www2.protocol.https.b.<init>(b.java:1) at com.ibm.net.ssl.www2.protocol.https.Handler.openConnection(Handler.java:11) at java.net.URL.openConnection(URL.java:995) at com.sun.xml.internal.ws.api.EndpointAddress.openConnection(EndpointAddress.java:206) at com.sun.xml.internal.ws.transport.http.client.HttpClientTransport.createHttpConnection(HttpClientTransport.java:277) at com.sun.xml.internal.ws.transport.http.client.HttpClientTransport.getOutput(HttpClientTransport.java:103) ... 14 more So it seems that this problem would be related to the JRE I'm using, but what doesn't seem to make sense is that the non-IBM JRE works fine, but the IBM JRE does not. Any ideas, or suggestions?

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  • Hive NR map progress inconsistent and regurlarly restart from 0%

    - by user92471
    I have a Yarn MR (with two ec2 instances to mapreduce) job on a dataset of approximately a thousand avro records, and the map phase is behaving erratically. See the progress below. Of course i checked the logs on resourcemanager and nodemanagers and saw nothing suspicious, but these logs are too verbose What is going on there ? hive> select * from nikon where qs_cs_s_aid='VIEW' limit 10; Total MapReduce jobs = 1 Launching Job 1 out of 1 Number of reduce tasks is set to 0 since there's no reduce operator Starting Job = job_1352281315350_0020, Tracking URL = http://blabla.ec2.internal:8088/proxy/application_1352281315350_0020/ Kill Command = /usr/lib/hadoop/bin/hadoop job -Dmapred.job.tracker=blabla.com:8032 -kill job_1352281315350_0020 Hadoop job information for Stage-1: number of mappers: 4; number of reducers: 0 2012-11-07 11:14:40,976 Stage-1 map = 0%, reduce = 0% 2012-11-07 11:15:06,136 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 10.38 sec 2012-11-07 11:15:07,253 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 12.18 sec 2012-11-07 11:15:08,371 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 12.18 sec 2012-11-07 11:15:09,491 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 12.18 sec 2012-11-07 11:15:10,643 Stage-1 map = 2%, reduce = 0%, Cumulative CPU 15.42 sec (...) 2012-11-07 11:15:35,441 Stage-1 map = 28%, reduce = 0%, Cumulative CPU 37.77 sec 2012-11-07 11:15:36,486 Stage-1 map = 28%, reduce = 0%, Cumulative CPU 37.77 sec here restart at 16% ? 2012-11-07 11:15:37,692 Stage-1 map = 16%, reduce = 0%, Cumulative CPU 21.15 sec 2012-11-07 11:15:38,815 Stage-1 map = 16%, reduce = 0%, Cumulative CPU 21.15 sec 2012-11-07 11:15:39,865 Stage-1 map = 16%, reduce = 0%, Cumulative CPU 21.15 sec 2012-11-07 11:15:41,064 Stage-1 map = 18%, reduce = 0%, Cumulative CPU 22.4 sec 2012-11-07 11:15:42,181 Stage-1 map = 18%, reduce = 0%, Cumulative CPU 22.4 sec 2012-11-07 11:15:43,299 Stage-1 map = 18%, reduce = 0%, Cumulative CPU 22.4 sec here restart at 0% ? 2012-11-07 11:15:44,418 Stage-1 map = 0%, reduce = 0% 2012-11-07 11:16:02,076 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 6.86 sec 2012-11-07 11:16:03,193 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 6.86 sec 2012-11-07 11:16:04,259 Stage-1 map = 2%, reduce = 0%, Cumulative CPU 8.45 sec (...) 2012-11-07 11:16:31,291 Stage-1 map = 22%, reduce = 0%, Cumulative CPU 35.34 sec 2012-11-07 11:16:32,414 Stage-1 map = 26%, reduce = 0%, Cumulative CPU 37.93 sec here restart at 11% ? 2012-11-07 11:16:33,459 Stage-1 map = 11%, reduce = 0%, Cumulative CPU 19.53 sec 2012-11-07 11:16:34,507 Stage-1 map = 11%, reduce = 0%, Cumulative CPU 19.53 sec 2012-11-07 11:16:35,731 Stage-1 map = 13%, reduce = 0%, Cumulative CPU 21.47 sec (...) 2012-11-07 11:16:46,839 Stage-1 map = 17%, reduce = 0%, Cumulative CPU 24.14 sec here restart at 0% ? 2012-11-07 11:16:47,939 Stage-1 map = 0%, reduce = 0% 2012-11-07 11:16:56,653 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 7.54 sec 2012-11-07 11:16:57,814 Stage-1 map = 1%, reduce = 0%, Cumulative CPU 7.54 sec (...) Needless to say the job crashes after some time with an Error: java.io.IOException: java.io.IOException: java.lang.ArrayIndexOutOfBoundsException: -56

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  • Problem in linking an nasm code

    - by Stefano
    I'm using a computer with an Intel Core 2 CPU and 2GB of RAM. The SO is Ubuntu 9.04. When I try to compile this code: ;programma per la simulazione di un terminale su PC, ottenuto utilizzando l'8250 ;in condizione di loopback , cioè Tx=Rx section .code64 section .data TXDATA EQU 03F8H ;TRASMETTITORE RXDATA EQU 03F8H ;RICEVITORE BAUDLSB EQU 03F8H ;DIVISORE DI BAUD RATE IN LSB BAUDMSB EQU 03F9H ;DIVISORE DI BAUD RATE IN MSB INTENABLE EQU 03F9H ;REGISTRO DI ABILITAZIONE DELL'INTERRUZIONE INTIDENTIF EQU 03FAH ;REGISTRO DI IDENTIFICAZIONE DELL'INTERRUZIONE LINECTRL EQU 03FBH ;REGISTRO DI CONTROLLO DELLA LINEA MODEMCTRL EQU 03FCH ;REGISTRO DI CONTROLLO DEL MODEM LINESTATUS EQU 03FDH ;REGISTRO DI STATO DELLA LINEA MODEMSTATUS EQU 03FEH ;REGISTRO DI STATO DEL MODEM BAUDRATEDIV DW 0060H ;DIVISOR: LOW=60, HIGH=00 -BAUD =9600 COUNTERCHAR DB 0 ;CHARACTER COUNTER ;DW 256 DUP (?) section .text global _start _start: ;PROGRAMMAZIONE 8250 MOV DX,LINECTRL MOV AL,80H ;BIT 7=1 PER INDIRIZZARE IL BAUD RATE OUT DX,AL MOV DX,BAUDLSB MOV AX,BAUDRATEDIV ;DEFINISCO FATTORE DI DIVISIONE OUT DX,AL MOV DX,BAUDMSB MOV AL,AH OUT DX,AL ;MSB MOV DX,LINECTRL MOV AL,00000011B ;8 BIT DATO, 1 STOP, PARITA' NO OUT DX,AL MOV DX,MODEMCTRL MOV AL,00010011B ;BIT 4=0 PER NO LOOPBACK OUT DX,AL MOV DX,INTENABLE XOR AL,AL ;DISABILITO TUTTI GLI INTERRUPTS OUT DX,AL CICLO: MOV DX,LINESTATUS IN AL,DX ;LEGGO IL REGISTRO DI STATO DELLA LINEA TEST AL,00011110B ;VERIFICO GLI ERRORI (4 TIPI) JNE ERRORI TEST AL,01H ;VERIFICO Rx PRONTO JNE LEGGOCHAR TEST AL,20H ;VERIFICO Tx VUOTO JE CICLO ;SE SI ARRIVA A QUESTO PUNTO ALLORA L'8250 è PRONTO PER TRASMETTERE UN NUOVO CARATTERE MOV AH,1 INT 80H JE CICLO ;SE SI ARRIVA A QUESTO PUNTO SIGNIFICA CHE ESISTE UN CARATTERE DA TASTIERA MOV AH,0 INT 80H ;Al CONTIENE IL CARATTERE DELLA TASTIERA MOV DX,3F8H OUT DX,AL JMP CICLO LEGGOCHAR: MOV AL,[COUNTERCHAR] INC AL CMP AL,15 JE FINE MOV [COUNTERCHAR],AL MOV DX,TXDATA IN AL,DX ;AL CONTIENE IL CARATTERE RICEVUTO AND AL,7FH ;POICHè VI SONO 7 BIT DI DATO ;VISUALIZZAZIONE DEL CARATTERE MOV BX,0 MOV AH,14 INT 80H POP AX CMP AL,0DH ;CONTROLLO SE RETURN JNE CICLO ;CAMBIO RIGA DI VISUALIZZAZIONE MOV AL,0AH MOV BX,0 MOV AH,14 ;INT 10H INT 80H JMP CICLO ;GESTIONE ERRORI ERRORI: MOV DX,3F8H IN AL,DX MOV AL,'?' MOV BX,0 MOV AH,14 INT 80H JMP CICLO FINE: XOR AH,AH MOV AL,03 INT 80H When I compile this code "NASM -f bin UARTLOOP.asm", the compiler can create the UARTLOOP.o file without any error. When I try to link the .o file with "ld UARTLOOP.o" it tells: UARTLOOP.o: In function `_start': UARTLOOP.asm:(.text+0xd): relocation truncated to fit: R_X86_64_16 against `.data' Have u got some ideas to solve this problem? Thx =)

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  • Applet Loading Error - Jasper Report

    - by Mihir
    I encountered very silly error , but any way i can not figure out solution.i am loading java applet which encompass a simple jasper viewer in it. when the applet is loaded it throws following exception. SEVERE: Servlet.service() for servlet JasperReportServlet threw exception java.lang.ClassNotFoundException: org.apache.commons.collections.ReferenceMap at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1358) at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1204) at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:320) at net.sf.jasperreports.extensions.DefaultExtensionsRegistry.<init>(DefaultExtensionsRegistry.java:96) at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) at java.lang.reflect.Constructor.newInstance(Constructor.java:513) at java.lang.Class.newInstance0(Class.java:355) at java.lang.Class.newInstance(Class.java:308) at net.sf.jasperreports.engine.util.ClassUtils.instantiateClass(ClassUtils.java:59) at net.sf.jasperreports.extensions.ExtensionsEnvironment.createDefaultRegistry(ExtensionsEnvironment.java:80) at net.sf.jasperreports.extensions.ExtensionsEnvironment.<clinit>(ExtensionsEnvironment.java:68) at net.sf.jasperreports.engine.util.JRStyledTextParser.<clinit>(JRStyledTextParser.java:76) at net.sf.jasperreports.engine.fill.JRBaseFiller.<init>(JRBaseFiller.java:182) at net.sf.jasperreports.engine.fill.JRVerticalFiller.<init>(JRVerticalFiller.java:77) at net.sf.jasperreports.engine.fill.JRVerticalFiller.<init>(JRVerticalFiller.java:87) at net.sf.jasperreports.engine.fill.JRVerticalFiller.<init>(JRVerticalFiller.java:57) at net.sf.jasperreports.engine.fill.JRFiller.createFiller(JRFiller.java:142) at net.sf.jasperreports.engine.fill.JRFiller.fillReport(JRFiller.java:78) at net.sf.jasperreports.engine.JasperFillManager.fillReport(JasperFillManager.java:624) at com.dbhl.app.report.generator.JobUpdateGenerator.getJasperPrintObject(JobUpdateGenerator.java:279) at com.dbhl.app.report.JasperReportServlet.processJobUpdate(JasperReportServlet.java:153) at com.dbhl.app.report.JasperReportServlet.getJasperPrintObjectByLedgerType(JasperReportServlet.java:79) at com.dbhl.app.report.JasperReportServlet.service(JasperReportServlet.java:50) at javax.servlet.http.HttpServlet.service(HttpServlet.java:803) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:290) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:175) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:128) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:263) at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:844) at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:584) at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:447) at java.lang.Thread.run(Thread.java:619) below is my applet configuration, i am loading applet using standard java deployment toolkit. <script type="text/javascript" src="<%=basePath%>js/deployJava.js"> </script> <script> var user = '<%=request.getParameter("user")%>'; var attributes = { code : 'applet.EmbeddedViewerApplet.class', archive : '<%=basePath%>resources/appletviewer.jar,<%=basePath%>resources/jasperreports-applet-4.0.0.jar,<%=basePath%>resources/jasperreports-4.0.0.jar,<%=basePath%>resources/commons-collections-3.2.1.jar,<%=basePath%>resources/commons-logging-1.0.4.jar,<%=basePath%>resources/commons-beanutils-1.8.0.jar,<%=basePath%>resources/commons-digester-1.7.jar,<%=basePath%>resources/commons-javaflow-20060411.jar,<%=basePath%>resources/org-netbeans-core.jar', width : "100%", height : 600 }; var parameters = { fontSize : 16, REPORT_URL : '<%=basePath%>servlet/JasperReportServlet?startDate=<%=request.getParameter("startDate")%>&endDate=<%=request.getParameter("endDate")%>&user=' + user + '&reportType=<%=request.getParameter("reportType")%>' }; var version = '1.4'; deployJava.runApplet(attributes, parameters, version); </script> every jar i referred in the applet attributes exist the resource folder of my webroot, which are appletviewer.jar commons-beanutils-1.8.0.jar commons-collections-3.2.1.jar commons-digester-1.7.jar commons-javaflow-20060411.jar commons-logging-1.0.4.jar jasperreports-4.0.0.jar jasperreports-applet-4.0.0.jar org-netbeans-core.jar all the jars are signed today, so no validity expires. i have double check all the things. but it always shows the above error. in iReport i can view the report and it is compiled to jasper object with no error. the java console from control panel http://pastebin.com/Xt6303tT My question is why the classNotFound Exception happens ? i check in the temp cache that the collections file is downloaded succesfully and in the above console log it shows that the jars are successfully downloaded to the host computer. Thank You Mihir Parekh

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  • activeX component in axapta

    - by Nico
    hi folks, i'm struggling with an .net activeX i try to use in ms axapta 2009. using this component on my local machine where it was compiled, it's working quite fine. it can be added as activeX element on a form, the methods and events are listed in the axapta-activeX-explorer and i can interact with it without any problems. but trying to distribute the dll to other clients isn't working as intended. the registration of the dll via regasm /codebase /tlb works properly - getting the message, registration was successful. the component is also listed when selecting an activeX-element to add in ax, but neither functions nor properties are listed. and launching the form results in an errormessage - activeX component CLSID ... not found on system, not installed. the classID is indeed the one, defined in .net. strange things happen, having a look on the task-manager. the activeX-component itself is just a wrapper to interact with a com-application. when launching the ax-form with the not working and _not_installed_!! activeX-thing, the taskmanager shows a new process of the com-application, which is instanciated by the activeX :/ things i tried: using different versions of regasm, eg \Windows\Microsoft.NET\Framework\v2.0.50727 ; C:\Windows\Microsoft.NET\Framework64\v2.0.50727 using new GUIDs in .net, prior removing the old ones from the registry compiling, using different versions of the .net framework doing registration via regasm, regasm /codebase, regasm /codebase /tlb, using a visual-studio-setup running registration via command-line as administrator running setup as administrator running even ax as administrator on client-machine moving dll to a different folder followed by new registration ( windows/system32; ax/client/bin ) installing to GAC ( gacutil /i ) different project-options in visual studio ( COM-Visibility; register for COM-Interop; different targetPlatform ) hoped for the fact, that compiling in visual studio with register for COM-Interop option enabled does something more than just the regasm-registration, i used a registry-monitor-microsoft-tool for logging the registry-activity which happend during compilation. using these logs to create all registry-entries on the target-client in addition didn't work either. any hints or help would be so much appreciated! this thing is blocking me for days now :(

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  • Using 32 bit g++ to build 64bit binaries on AIX

    - by Thumbeti
    I am trying to build a 64 bit binary from C++ code using 32bit g++ compiler. I am getting the following errors while building: ============================================================================= => /usr/local/bin/g++ -shared -maix64 -fPIC -Wl,-bM:SRE -Wl,-bnoentry -Wl,-bE:gcc_shr_lib.so.exp -o gcc_shr_lib.so gcc_shr_lib.o -L/usr/local/lib ld: 0711-319 WARNING: Exported symbol not defined: gcc_whereAmI ld: 0711-317 ERROR: Undefined symbol: typeinfo for std::bad_alloc ld: 0711-317 ERROR: Undefined symbol: __gxx_personality_v0 ld: 0711-317 ERROR: Undefined symbol: vtable for std::exception ld: 0711-317 ERROR: Undefined symbol: vtable for std::bad_alloc ld: 0711-317 ERROR: Undefined symbol: .std::ios_base::Init::Init() ld: 0711-317 ERROR: Undefined symbol: .std::ios_base::Init::~Init() ld: 0711-317 ERROR: Undefined symbol: .operator new(unsigned long) ld: 0711-317 ERROR: Undefined symbol: .operator delete(void*) ld: 0711-317 ERROR: Undefined symbol: ._Unwind_Resume ld: 0711-317 ERROR: Undefined symbol: .__cxa_get_exception_ptr ld: 0711-317 ERROR: Undefined symbol: .__cxa_begin_catch ld: 0711-317 ERROR: Undefined symbol: std::cout ld: 0711-317 ERROR: Undefined symbol: .std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*) ld: 0711-317 ERROR: Undefined symbol: std::basic_ostream<char, std::char_traits<char> >& std::endl<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&) ld: 0711-317 ERROR: Undefined symbol: .std::basic_ostream<char, std::char_traits<char> >::operator<<(std::basic_ostream<char, std::char_traits<char> >& (*)(std::basic_ostream<char, std::char_traits<char> >&)) ld: 0711-317 ERROR: Undefined symbol: .std::bad_alloc::~bad_alloc() ld: 0711-317 ERROR: Undefined symbol: .__cxa_end_catch ld: 0711-317 ERROR: Undefined symbol: .__register_frame_info_table ld: 0711-317 ERROR: Undefined symbol: .__deregister_frame_info ld: 0711-345 Use the -bloadmap or -bnoquiet option to obtain more information. collect2: ld returned 8 exit status ============================================================================= It seems I need 64bit libstdc++ available on my build system. Could you please throw some light to solve this. Q1) Is it ok to build 64 bit binaries using 32 bit g++ compiler on AIX 5.2 Q2) Where should I get 64 bit libstdc++? Will this 64 bit libstdc++ work with 32bit g++ compiler?

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  • Connecting to Active Directory Application Mode from Perl

    - by Khurram Aziz
    I am trying to connect to Active Directory Application Mode instance. The instance is conenctable from third party LDAP clients like Softerra LDAP Browser. But I am getting the following error when connecting from Perl Net::LDAP=HASH(0x876d8e4) sending: Net::LDAP=HASH(0x876d8e4) received: 30 84 00 00 00 A7 02 01 02 65 84 00 00 00 9E 0A 0........e...... 01 01 04 00 04 84 00 00 00 93 30 30 30 30 30 34 ..........000004 44 43 3A 20 4C 64 61 70 45 72 72 3A 20 44 53 49 DC: LdapErr: DSI 44 2D 30 43 30 39 30 36 32 42 2C 20 63 6F 6D 6D D-0C09062B, comm 65 6E 74 3A 20 49 6E 20 6F 72 64 65 72 20 74 6F ent: In order to 20 70 65 72 66 6F 72 6D 20 74 68 69 73 20 6F 70 perform this op 65 72 61 74 69 6F 6E 20 61 20 73 75 63 63 65 73 eration a succes 73 66 75 6C 20 62 69 6E 64 20 6D 75 73 74 20 62 sful bind must b 65 20 63 6F 6D 70 6C 65 74 65 64 20 6F 6E 20 74 e completed on t 68 65 20 63 6F 6E 6E 65 63 74 69 6F 6E 2E 2C 20 he connection., 64 61 74 61 20 30 2C 20 76 65 63 65 00 __ __ __ data 0, vece.` My directory structure is Partition: CN=Apps,DC=MyCo,DC=COM User exists as CN=myuser,CN=Apps,DC=MyCo,DC=COM I have couple of other entries of the custom class which I am interested to browse; those instances appear fine in ADSI Edit, Softerra LDAP Browser etc. I am new to Perl....My perl code is #!/usr/bin/perl use Net::LDAP; $ldap = Net::LDAP->new("127.0.0.1", debug => 2, user => "CN=myuser,CN=Apps,DC=MyCo,DC=COM", password => "secret" ) or die "$@"; $ldap->bind(version => 3) or die "$@"; print "Connected to ldap\n"; $mesg = $ldap->search( filter => "(objectClass=*)" ) or die ("Failed on search.$!"); my $max = $mesg->count; print "$max records found!\n"; for( my $index = 0 ; $index < $max ; $index++) { my $entry = $mesg->entry($index); my $dn = $entry->dn; @attrs = $entry->attributes; foreach my $var (@attrs) { $attr = $entry->get_value( $var, asref => 1 ); if ( defined($attr) ) { foreach my $value ( @$attr ) { print "$var: $value\n"; } } } } $ldap->unbind();

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  • How to use c++0x thread in Android NDK?

    - by m-ric
    I am trying to compile this simple program with android-ndk-r8b: jni/hello_jni.cpp #include <iostream> #include <thread> void hello() { std::cout << "Hi i'm a thread!!!" << std::endl; } int main() { std::thread th(hello); th.join(); return 0; } jni/Application.mk APP_OPTIM := release APP_MODULES := hello_thread APP_STL := gnustl_static jni/Android.mk LOCAL_PATH := $(call my-dir) include $(CLEAR_VARS) LOCAL_CPPFLAGS += -std=c++0x -frtti LOCAL_MODULE := hello_thread LOCAL_LDLIBS := -L$(SYSROOT)/usr/lib -pthread LOCAL_SRC_FILES := hello_thread.cpp include $(BUILD_EXECUTABLE) ndk-build returns me an error arguin that 'thread' is not a member of 'std'. I issued ndk-build -n to get the compilation command and issued it alone in my shell: /home/evigier/android-ndk-r8b/toolchains/arm-linux-androideabi-4.6/prebuilt/linux-x86/bin/arm-linux-androideabi-g++ -MMD -MP -MF /home/evigier/eclipse_workspace/hello_thread/obj/local/armeabi/objs/hello_thread/hello_thread.o.d -fpic -ffunction-sections -funwind-tables -fstack-protector -D__ARM_ARCH_5__ -D__ARM_ARCH_5T__ -D__ARM_ARCH_5E__ -D__ARM_ARCH_5TE__ -march=armv5te -mtune=xscale -msoft-float -fno-exceptions -fno-rtti -mthumb -Os -fomit-frame-pointer -fno-strict-aliasing -finline-limit=64 -I/home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include -I/home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/libs/armeabi/include -I/home/evigier/eclipse_workspace/hello_thread/jni -DANDROID -Wa,--noexecstack -std=c++0x -frtti -O2 -DNDEBUG -g -I/home/evigier/android-ndk-r8b/platforms/android-14/arch-arm/usr/include -c /home/evigier/eclipse_workspace/hello_thread/jni/hello_thread.cpp -o /home/evigier/eclipse_workspace/hello_thread/obj/local/armeabi/objs/hello_thread/hello_thread.o Compile++ thumb : hello_thread <= hello_thread.cpp In file included from /home/evigier/android-ndk-r8b/platforms/android-14/arch-arm/usr/include/stdio.h:55:0, from /home/evigier/android-ndk-r8b/platforms/android-14/arch-arm/usr/include/wchar.h:33, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/cwchar:46, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/bits/postypes.h:42, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/iosfwd:42, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/ios:39, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/ostream:40, from /home/evigier/android-ndk-r8b/sources/cxx-stl/gnu-libstdc++/4.6/include/iostream:40, from jni/hello_thread.cpp:4: /home/evigier/android-ndk-r8b/platforms/android-14/arch-arm/usr/include/sys/types.h:124:9: error: 'uint64_t' does not name a type /home/evigier/eclipse_workspace/hello_thread/jni/hello_thread.cpp: In function 'int main()': /home/evigier/eclipse_workspace/hello_thread/jni/hello_thread.cpp:14:5: error: 'thread' is not a member of 'std' /home/evigier/eclipse_workspace/hello_thread/jni/hello_thread.cpp:14:17: error: expected ';' before 'th' /home/evigier/eclipse_workspace/hello_thread/jni/hello_thread.cpp:15:5: error: 'th' was not declared in this scope I read a lot of threads/questions about POSIX threads and C++ threads, but still cannot find my answer. My arm-linux-androideabi/include/c++/4.6/thread file defines class thread in std only: #if defined(_GLIBCXX_HAS_GTHREADS) && defined(_GLIBCXX_USE_C99_STDINT_TR1) They don't seem to be defined in my sdk (c++config.h). But how can I possibly turn them on safely? Do i need to compile my own toolchain to use (non-p)threads? My host computer is : Linux evigier-ThinkPad-X220 3.0.0-17-generic #30-Ubuntu SMP Thu Mar 8 20:45:39 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux

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  • How can I read individual lines of a CSV file into a string array, to then be selectively displayed

    - by Ryan
    I need your help, guys! :| I've got myself a CSV file with the following contents: 1,The Compact,1.8GHz,1024MB,160GB,440 2,The Medium,2.4GHz,1024MB,180GB,500 3,The Workhorse,2.4GHz,2048MB,220GB,650 It's a list of computer systems, basically, that the user can purchase. I need to read this file, line-by-line, into an array. Let's call this array csvline(). The first line of the text file would stored in csvline(0). Line two would be stored in csvline(1). And so on. (I've started with zero because that's where VB starts its arrays). A drop-down list would then enable the user to select 1, 2 or 3 (or however many lines/systems are stored in the file). Upon selecting a number - say, 1 - csvline(0) would be displayed inside a textbox (textbox1, let's say). If 2 was selected, csvline(1) would be displayed, and so on. It's not the formatting I need help with, though; that's the easy part. I just need someone to help teach me how to read a CSV file line-by-line, putting each line into a string array - csvlines(count) - then increment count by one so that the next line is read into another slot. So far, I've been able to paste the numbers of each system into an combobox: Using csvfileparser As New Microsoft.VisualBasic.FileIO.TextFieldParser _ ("F:\folder\programname\programname\bin\Debug\systems.csv") Dim csvalue As String() csvfileparser.TextFieldType = Microsoft.VisualBasic.FileIO.FieldType.Delimited csvfileparser.Delimiters = New String() {","} While Not csvfileparser.EndOfData csvalue = csvfileparser.ReadFields() combobox1.Items.Add(String.Format("{1}{0}", _ Environment.NewLine, _ csvalue(0))) End While End Using But this only selects individual values. I need to figure out how selecting one of these numbers in the combobox can trigger textbox1 to be appended with just that line (I can handle the formatting, using the string.format stuff). If I try to do this using csvalue = csvtranslator.ReadLine , I get the following error message: "Error 1 Value of type 'String' cannot be converted to '1-dimensional array of String'." If I then put it as an array, ie: csvalue() = csvtranslator.ReadLine , I then get a different error message: "Error 1 Number of indices is less than the number of dimensions of the indexed array." What's the knack, guys? I've spent hours trying to figure this out. Please go easy on me - and keep any responses ultra-simple for my newbie brain - I'm very new to all this programming malarkey and just starting out! :)

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  • build error with boost spirit grammar (boost 1.43 and g++ 4.4.1) part II

    - by lurscher
    I'm having issues getting a small spirit/qi grammar to compile. i am using boost 1.43 and g++ 4.4.1. the input grammar header: inputGrammar.h #include <boost/config/warning_disable.hpp> #include <boost/spirit/include/qi.hpp> #include <boost/spirit/include/phoenix_core.hpp> #include <boost/spirit/include/phoenix_operator.hpp> #include <boost/spirit/include/phoenix_fusion.hpp> #include <boost/spirit/include/phoenix_stl.hpp> #include <boost/fusion/include/adapt_struct.hpp> #include <boost/variant/recursive_variant.hpp> #include <boost/foreach.hpp> #include <iostream> #include <fstream> #include <string> #include <vector> namespace sp = boost::spirit; namespace qi = boost::spirit::qi; using namespace boost::spirit::ascii; //using namespace boost::spirit::arg_names; namespace fusion = boost::fusion; namespace phoenix = boost::phoenix; using phoenix::at_c; using phoenix::push_back; template< typename Iterator , typename ExpressionAST > struct InputGrammar : qi::grammar<Iterator, ExpressionAST(), space_type> { InputGrammar() : InputGrammar::base_type( block ) { tag = sp::lexeme[+(alpha) [sp::_val += sp::_1]];//[+(char_ - '<') [_val += _1]]; block = sp::lit("block") [ at_c<0>(sp::_val) = sp::_1] >> "(" >> *instruction[ push_back( at_c<1>(sp::_val) , sp::_1 ) ] >> ")"; command = tag [ at_c<0>(sp::_val) = sp::_1] >> "(" >> *instruction [ push_back( at_c<1>(sp::_val) , sp::_1 )] >> ")"; instruction = ( command | tag ) [sp::_val = sp::_1]; } qi::rule< Iterator , std::string() , space_type > tag; qi::rule< Iterator , ExpressionAST() , space_type > block; qi::rule< Iterator , ExpressionAST() , space_type > function_def; qi::rule< Iterator , ExpressionAST() , space_type > command; qi::rule< Iterator , ExpressionAST() , space_type > instruction; }; the test build program: #include <iostream> #include <string> #include <vector> using namespace std; //my grammar #include <InputGrammar.h> struct MockExpressionNode { std::string name; std::vector< MockExpressionNode > operands; typedef std::vector< MockExpressionNode >::iterator iterator; typedef std::vector< MockExpressionNode >::const_iterator const_iterator; iterator begin() { return operands.begin(); } const_iterator begin() const { return operands.begin(); } iterator end() { return operands.end(); } const_iterator end() const { return operands.end(); } bool is_leaf() const { return ( operands.begin() == operands.end() ); } }; BOOST_FUSION_ADAPT_STRUCT( MockExpressionNode, (std::string, name) (std::vector<MockExpressionNode>, operands) ) int const tabsize = 4; void tab(int indent) { for (int i = 0; i < indent; ++i) std::cout << ' '; } template< typename ExpressionNode > struct ExpressionNodePrinter { ExpressionNodePrinter(int indent = 0) : indent(indent) { } void operator()(ExpressionNode const& node) const { cout << " tag: " << node.name << endl; for (int i=0 ; i < node.operands.size() ; i++ ) { tab( indent ); cout << " arg "<<i<<": "; ExpressionNodePrinter(indent + 2)( node.operands[i]); cout << endl; } } int indent; }; int test() { MockExpressionNode root; InputGrammar< string::const_iterator , MockExpressionNode > g; std::string litA = "litA"; std::string litB = "litB"; std::string litC = "litC"; std::string litD = "litD"; std::string litE = "litE"; std::string litF = "litF"; std::string source = litA+"( "+litB+" ,"+litC+" , "+ litD+" ( "+litE+", "+litF+" ) "+ " )"; string::const_iterator iter = source.begin(); string::const_iterator end = source.end(); bool r = qi::phrase_parse( iter , end , g , space , root ); ExpressionNodePrinter< MockExpressionNode > np; np( root ); }; int main() { test(); } finally, the build error is the following: (the full error trace is 20 times bigger than the allowed size for a stackoverflow question, so i posted the full version of it at http://codepad.org/Q74IVCUc) /usr/bin/make -f nbproject/Makefile-linux_amd64_devel.mk SUBPROJECTS= .build-conf make[1]: se ingresa al directorio `/home/mineq/NetBeansProjects/InputParserTests' /usr/bin/make -f nbproject/Makefile-linux_amd64_devel.mk dist/linux_amd64_devel/GNU-Linux-x86/vpuinputparsertests make[2]: se ingresa al directorio `/home/mineq/NetBeansProjects/InputParserTests' mkdir -p build/linux_amd64_devel/GNU-Linux-x86 rm -f build/linux_amd64_devel/GNU-Linux-x86/tests_main.o.d g++ `llvm-config --cxxflags` `pkg-config --cflags unittest-cpp` `pkg-config --cflags boost-1.43` `pkg-config --cflags boost-coroutines` -c -g -I../InputParser -MMD -MP -MF build/linux_amd64_devel/GNU-Linux-x86/tests_main.o.d -o build/linux_amd64_devel/GNU-Linux-x86/tests_main.o tests_main.cpp from /home/mineq/third_party/boost_1_43_0/boost/spirit/include/phoenix_operator.hpp:11, from ../InputParser/InputGrammar.h:14, from tests_main.cpp:14: /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/operator/self.hpp: In instantiation of ‘const int boost::phoenix::result_of_assign<MockExpressionNode&, boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>::size’: In file included from /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/operator.hpp:16, /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/operator/self.hpp:27: instantiated from ‘const int boost::phoenix::result_of_assign<MockExpressionNode&, boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>::index’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/operator/self.hpp:27: instantiated from ‘boost::phoenix::result_of_assign<MockExpressionNode&, boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>’ /home/mineq/third_party/boost_1_43_0/boost/mpl/eval_if.hpp:38: instantiated from ‘boost::mpl::eval_if<boost::mpl::or_<boost::phoenix::is_actor<MockExpressionNode&>, boost::phoenix::is_actor<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>, mpl_::bool_<false>, mpl_::bool_<false>, mpl_::bool_<false> >, boost::phoenix::re_curry<boost::phoenix::assign_eval, MockExpressionNode&, boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_>, boost::phoenix::result_of_assign<MockExpressionNode&, boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&> >’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/operator/self.hpp:69: instantiated from ‘boost::phoenix::assign_eval::result<boost::phoenix::basic_environment<boost::fusion::vector1<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>, boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, bool, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_>, boost::spirit::attribute<0>, boost::spirit::argument<0> >’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/core/detail/composite_eval.hpp:89: instantiated from ‘boost::phoenix::detail::composite_eval<2>::result<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >, boost::phoenix::basic_environment<boost::fusion::vector1<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>, boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, bool, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/core/composite.hpp:61: instantiated from ‘boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >::result<boost::phoenix::basic_environment<boost::fusion::vector1<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>, boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, bool, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/core/actor.hpp:56: instantiated from ‘boost::phoenix::eval_result<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >, boost::phoenix::basic_environment<boost::fusion::vector1<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>, boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, bool, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/phoenix/core/actor.hpp:65: instantiated from ‘boost::phoenix::actor<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> > >::result<boost::phoenix::actor<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> > >(boost::fusion::vector1<boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>&>&, boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >&, bool&)>’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/support/action_dispatch.hpp:44: instantiated from ‘bool boost::spirit::traits::action_dispatch<Component>::operator()(const boost::phoenix::actor<Eval>&, Attribute&, Context&) [with Eval = boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> >, Attribute = boost::variant<MockExpressionNode, std::basic_string<char, std::char_traits<char>, std::allocator<char> >, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_, boost::detail::variant::void_>, Context = boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, Component = boost::spirit::qi::alternative<boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, MockExpressionNode(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::string(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::nil> > >]’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/qi/action/action.hpp:62: instantiated from ‘bool boost::spirit::qi::action<Subject, Action>::parse(Iterator&, const Iterator&, Context&, const Skipper&, Attribute&) const [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, Context = boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, Skipper = boost::spirit::qi::char_class<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, Attribute = const boost::fusion::unused_type, Subject = boost::spirit::qi::alternative<boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, MockExpressionNode(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::string(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::nil> > >, Action = boost::phoenix::actor<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> > >]’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/qi/nonterminal/detail/parser_binder.hpp:33: instantiated from ‘bool boost::spirit::qi::detail::parser_binder<Parser, Auto>::call(Iterator&, const Iterator&, Context&, const Skipper&, mpl_::true_) const [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, Skipper = boost::spirit::qi::char_class<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, Context = boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, Parser = boost::spirit::qi::action<boost::spirit::qi::alternative<boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, MockExpressionNode(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::string(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::nil> > >, boost::phoenix::actor<boost::phoenix::composite<boost::phoenix::assign_eval, boost::fusion::vector<boost::spirit::attribute<0>, boost::spirit::argument<0>, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_, boost::fusion::void_> > > >, Auto = mpl_::bool_<false>]’ /home/mineq/third_party/boost_1_43_0/boost/spirit/home/qi/nonterminal/detail/parser_binder.hpp:53: instantiated from ‘bool boost::spirit::qi::detail::parser_binder<Parser, Auto>::operator()(Iterator&, const Iterator&, Context&, const Skipper&) const [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, Skipper = boost::spirit::qi::char_class<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, Context = boost::spirit::context<boost::fusion::cons<MockExpressionNode&, boost::fusion::nil>, boost::fusion::vector0<void> >, Parser = boost::spirit::qi::action<boost::spirit::qi::alternative<boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, MockExpressionNode(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::cons<boost::spirit::qi::reference<const boost::spirit::qi::rule<__gnu_cxx::__normal_iterator<const char*, std::basic_string<char, std::char_traits<char>, std::allocator<char> > >, std::string(), boost::proto::exprns_::expr<boost::proto::tag::terminal, boost::proto::argsns_::term<boost::spirit::tag::char_code<boost::spirit::tag::space, boost::spirit::char_encoding::ascii> >, 0l>, boost::fusion::unused_type, boost::fusion::unused_type> >, boost::fusion::nil> > >, ... ... more errors but i had to truncate to fit the 30k limit make[2]: *** [build/linux_amd64_devel/GNU-Linux-x86/tests_main.o] Error 1 make[2]: se sale del directorio `/home/mineq/NetBeansProjects/InputParserTests' make[1]: *** [.build-conf] Error 2 make[1]: se sale del directorio `/home/mineq/NetBeansProjects/InputParserTests' make: *** [.build-impl] Error 2 BUILD FAILED (exit value 2, total time: 2m 13s)

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  • How can I extract paragaphs and selected lines with Perl?

    - by neversaint
    I have a text where I need to: to extract the whole paragraph under the section "Aceview summary" until the line that starts with "Please quote" (not to be included). to extract the line that starts with "The closest human gene". to store them into array with two elements. The text looks like this (also on pastebin): AceView: gene:1700049G17Rik, a comprehensive annotation of human, mouse and worm genes with mRNAs or ESTsAceView. <META NAME="title" CONTENT=" AceView: gene:1700049G17Rik a comprehensive annotation of human, mouse and worm genes with mRNAs or EST"> <META NAME="keywords" CONTENT=" AceView, genes, Acembly, AceDB, Homo sapiens, Human, nematode, Worm, Caenorhabditis elegans , WormGenes, WormBase, mouse, mammal, Arabidopsis, gene, alternative splicing variant, structure, sequence, DNA, EST, mRNA, cDNA clone, transcript, transcription, genome, transcriptome, proteome, peptide, GenBank accession, dbest, RefSeq, LocusLink, non-coding, coding, exon, intron, boundary, exon-intron junction, donor, acceptor, 3'UTR, 5'UTR, uORF, poly A, poly-A site, molecular function, protein annotation, isoform, gene family, Pfam, motif ,Blast, Psort, GO, taxonomy, homolog, cellular compartment, disease, illness, phenotype, RNA interference, RNAi, knock out mutant expression, regulation, protein interaction, genetic, map, antisense, trans-splicing, operon, chromosome, domain, selenocysteine, Start, Met, Stop, U12, RNA editing, bibliography"> <META NAME="Description" CONTENT= " AceView offers a comprehensive annotation of human, mouse and nematode genes reconstructed by co-alignment and clustering of all publicly available mRNAs and ESTs on the genome sequence. Our goals are to offer a reliable up-to-date resource on the genes, their functions, alternative variants, expression, regulation and interactions, in the hope to stimulate further validating experiments at the bench "> <meta name="author" content="Danielle Thierry-Mieg and Jean Thierry-Mieg, NCBI/NLM/NIH, [email protected]"> <!-- var myurl="av.cgi?db=mouse" ; var db="mouse" ; var doSwf="s" ; var classe="gene" ; //--> However I am stuck with the following script logic. What's the right way to achieve that? #!/usr/bin/perl -w my $INFILE_file_name = $file; # input file name open ( INFILE, '<', $INFILE_file_name ) or croak "$0 : failed to open input file $INFILE_file_name : $!\n"; my @allsum; while ( <INFILE> ) { chomp; my $line = $_; my @temp1 = (); if ( $line =~ /^ AceView summary/ ) { print "$line\n"; push @temp1, $line; } elsif( $line =~ /Please quote/) { push @allsum, [@temp1]; @temp1 = (); } elsif ($line =~ /The closest human gene/) { push @allsum, $line; } } close ( INFILE ); # close input file # Do something with @allsum There are many files like that I need to process.

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  • How to run a powershell script within a DOS batch file

    - by Don Vince
    How do I have a powershell script embedded within the same file as a DOS batch script? I know this kind of thing is possible in other scenarios: Embedding SQL in a DOS batch script using sqlcmd and a clever arrangements of goto's and comments at the beginning of the file In a *nix environment having a the name of the program you wish to run the script with on the first line of the script commented out e.g. #!/usr/local/bin/python There may not be a way to do this - in which case I will have to call the separate powershell script from the launching DOS script. One possible solution I've considered is to echo out the powershell script, and then run it. A good reason to not do this is that part of the reason to attempt this is to be using the advantages of the powershell environment without the pain of, for example, DOS escape characters I have some unusual constraints and would like to find an elegant solution. I suspect this question may be baiting responses of the variety: "why don't you try and solve this different problem instead." Suffice to say these are my constraints, sorry about that. Any ideas? Is there a suitable combination of clever comments and escape characters that will enable me to achieve this? Some thoughts on how to achieve this: A carat ^ at the end of a line in DOS is a continuation - like an underscore in VB An ampersand & in DOS typically is used to separate commands echo Hello & echo World results in 2 echos on separate lines %0 will give you the script that's currently running So something like this (if I could make it work) would be good: # & call powershell -psconsolefile %0 # & goto :EOF /* From here on in we're running nice juicy powershell code */ Write-Output "Hello World" Except... It doesn't work... because the extension of the file isn't as per powershell's liking: Windows PowerShell console file "insideout.bat" extension is not psc1. Windows PowerShell console file extension must be psc1. DOS isn't really altogether happy with the situation either - although it does stumble on '#' is not recognized as an internal or external command, operable program or batch file.

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  • C# and Metadata File Errors

    - by j-t-s
    Hi All I've created my own little c# compiler using the tutorial on MSDN, and it's not working properly. I get a few errors, then I fix them, then I get new, different errors, then I fix them, etc etc. The latest error is really confusing me. --------------------------- --------------------------- Line number: 0, Error number: CS0006, 'Metadata file 'System.Linq.dll' could not be found; --------------------------- OK --------------------------- I do not know what this means. Can somebody please explain what's going on here? Here is my code. MY SAMPLE C# COMPILER CODE: using System; namespace JTM { public class CSCompiler { protected string ot, rt, ss, es; protected bool rg, cg; public string Compile(String se, String fe, String[] rdas, String[] fs, Boolean rn) { System.CodeDom.Compiler.CodeDomProvider CODEPROV = System.CodeDom.Compiler.CodeDomProvider.CreateProvider("CSharp"); ot = fe; System.CodeDom.Compiler.CompilerParameters PARAMS = new System.CodeDom.Compiler.CompilerParameters(); // Ensure the compiler generates an EXE file, not a DLL. PARAMS.GenerateExecutable = true; PARAMS.OutputAssembly = ot; foreach (String ay in rdas) { if (ay.Contains(".dll")) PARAMS.ReferencedAssemblies.Add(ay); else { string refd = ay; refd = refd + ".dll"; PARAMS.ReferencedAssemblies.Add(refd); } } System.CodeDom.Compiler.CompilerResults rs = CODEPROV.CompileAssemblyFromFile(PARAMS, fs); if (rs.Errors.Count > 0) { foreach (System.CodeDom.Compiler.CompilerError COMERR in rs.Errors) { es = es + "Line number: " + COMERR.Line + ", Error number: " + COMERR.ErrorNumber + ", '" + COMERR.ErrorText + ";" + Environment.NewLine + Environment.NewLine; } } else { // Compilation succeeded. es = "Compilation Succeeded."; if (rn) System.Diagnostics.Process.Start(ot); } return es; } } } ... And here is the app that passes the code to the above class: using System; using System.Collections.Generic; using System.ComponentModel; using System.Data; using System.Drawing; using System.Linq; using System.Text; using System.Windows.Forms; namespace WindowsFormsApplication1 { public partial class Form1 : Form { public Form1() { InitializeComponent(); } private void button1_Click(object sender, EventArgs e) { string[] f = { "Form1.cs", "Form1.Designer.cs", "Program.cs" }; string[] ra = { "System.dll", "System.Windows.Forms.dll", "System.Data.dll", "System.Drawing.dll", "System.Deployment.dll", "System.Xml.dll", "System.Linq.dll" }; JTS.CSCompiler CSC = new JTS.CSCompiler(); MessageBox.Show(CSC.Compile( textBox1.Text, @"Test Application.exe", ra, f, false)); } } } So, as you can see, all the using directives are there. I don't know what this error means. Any help at all is much appreciated. Thank you

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