Finding which contigs go into any given scaffold in an 454-Newbler assembly

Posted by Martin Malmstrøm on Stack Overflow See other posts from Stack Overflow or by Martin Malmstrøm
Published on 2009-11-30T16:14:20Z Indexed on 2010/03/19 6:11 UTC
Read the original article Hit count: 271

Filed under:

genome-assembly

|

newbler

I guess there should be a quite simple script for calling which contigs go into which scaffolds. This is 454 data assembled with Newbler.

Thanks!

© Stack Overflow or respective owner

Related posts about genome-assembly

Finding which contigs go into any given scaffold in an 454-Newbler assembly

as seen on Stack Overflow - Search for 'Stack Overflow'
I guess there should be a quite simple script for calling which contigs go into which scaffolds. This is 454 data assembled with Newbler. Thanks! >>> More

Related posts about newbler

Finding which contigs go into any given scaffold in an 454-Newbler assembly

as seen on Stack Overflow - Search for 'Stack Overflow'
I guess there should be a quite simple script for calling which contigs go into which scaffolds. This is 454 data assembled with Newbler. Thanks! >>> More