Suggestions for duplicate file finder algorithm (using C)

Posted by Andrei Ciobanu on Stack Overflow See other posts from Stack Overflow or by Andrei Ciobanu
Published on 2010-04-18T16:22:19Z Indexed on 2010/04/18 16:33 UTC
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Hello, I wanted to write a program that test if two files are duplicates (have exactly the same content). First I test if the files have the same sizes, and if they have i start to compare their contents.

My first idea, was to "split" the files into fixed size blocks, then start a thread for every block, fseek to startup character of every block and continue the comparisons in parallel. When a comparison from a thread fails, the other working threads are canceled, and the program exits out of the thread spawning loop.

The code looks like this: dupf.h

#ifndef __NM__DUPF__H__
#define __NM__DUPF__H__
#define NUM_THREADS 15
#define BLOCK_SIZE 8192

/* Thread argument structure */
struct thread_arg_s {
    const char *name_f1;        /* First file name */
    const char *name_f2;        /* Second file name */
    int cursor;                 /* Where to seek in the file */
};
typedef struct thread_arg_s thread_arg;

/**
 * 'arg' is of type thread_arg.
 * Checks if the specified file blocks are 
 * duplicates.
 */
void *check_block_dup(void *arg);

/**
 * Checks if two files are duplicates
 */
int check_dup(const char *name_f1, const char *name_f2);

/**
* Returns a valid pointer to a file.
* If the file (given by the path/name 'fname') cannot be opened
* in 'mode', the program is interrupted an error message is shown.
**/
FILE *safe_fopen(const char *name, const char *mode);

#endif

dupf.c

#include <errno.h>
#include <pthread.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <sys/types.h>
#include <sys/stat.h>
#include <unistd.h>
#include "dupf.h"

FILE *safe_fopen(const char *fname, const char *mode)
{
    FILE *f = NULL;
    f = fopen(fname, mode);
    if (f == NULL) {
        char emsg[255];
        sprintf(emsg, "FOPEN() %s\t", fname);
        perror(emsg);
        exit(-1);
    }
    return (f);
}

void *check_block_dup(void *arg)
{
    const char *name_f1 = NULL, *name_f2 = NULL;    /* File names */
    FILE *f1 = NULL, *f2 = NULL;                    /* Streams */
    int cursor = 0;                                 /* Reading cursor */
    char buff_f1[BLOCK_SIZE], buff_f2[BLOCK_SIZE];  /* Character buffers */
    int rchars_1, rchars_2;                         /* Readed characters */
    /* Initializing variables from 'arg' */
    name_f1 = ((thread_arg*)arg)->name_f1;
    name_f2 = ((thread_arg*)arg)->name_f2;
    cursor = ((thread_arg*)arg)->cursor;
    /* Opening files */
    f1 = safe_fopen(name_f1, "r");
    f2 = safe_fopen(name_f2, "r");
    /* Setup cursor in files */
    fseek(f1, cursor, SEEK_SET);
    fseek(f2, cursor, SEEK_SET);
    /* Initialize buffers */
    rchars_1 = fread(buff_f1, 1, BLOCK_SIZE, f1);
    rchars_2 = fread(buff_f2, 1, BLOCK_SIZE, f2);
    if (rchars_1 != rchars_2) {
        /* fread failed to read the same portion.
         * program cannot continue */
        perror("ERROR WHEN READING BLOCK");
        exit(-1);
    }
    while (rchars_1-->0) {
        if (buff_f1[rchars_1] != buff_f2[rchars_1]) {
            /* Different characters */
            fclose(f1);
            fclose(f2);
            pthread_exit("notdup");
        }
    }
    /* Close streams */
    fclose(f1);
    fclose(f2);
    pthread_exit("dup");
}

int check_dup(const char *name_f1, const char *name_f2)
{
    int num_blocks = 0;             /* Number of 'blocks' to check */
    int num_tsp = 0;                /* Number of threads spawns */
    int tsp_iter = 0;               /* Iterator for threads spawns */
    pthread_t *tsp_threads = NULL;
    thread_arg *tsp_threads_args = NULL;
    int tsp_threads_iter = 0;
    int thread_c_res = 0;           /* Thread creation result */
    int thread_j_res = 0;           /* Thread join res */
    int loop_res = 0;               /* Function result */
    int cursor;
    struct stat buf_f1;
    struct stat buf_f2;

    if (name_f1 == NULL || name_f2 == NULL) {
        /* Invalid input parameters */
        perror("INVALID FNAMES\t");
        return (-1);
    }

    if (stat(name_f1, &buf_f1) != 0 || stat(name_f2, &buf_f2) != 0) {
        /* Stat fails */
        char emsg[255];
        sprintf(emsg, "STAT() ERROR: %s %s\t", name_f1, name_f2);
        perror(emsg);
        return (-1);
    }

    if (buf_f1.st_size != buf_f2.st_size) {
        /* File have different sizes */
        return (1);
    }

    /* Files have the same size, function exec. is continued */
    num_blocks = (buf_f1.st_size / BLOCK_SIZE) + 1;
    num_tsp = (num_blocks / NUM_THREADS) + 1;
    cursor = 0;
    for (tsp_iter = 0; tsp_iter < num_tsp; tsp_iter++) {
        loop_res = 0;
        /* Create threads array for this spawn */
        tsp_threads = malloc(NUM_THREADS * sizeof(*tsp_threads));
        if (tsp_threads == NULL) {
            perror("TSP_THREADS ALLOC FAILURE\t");
            return (-1);
        }
        /* Create arguments for every thread in the current spawn */
        tsp_threads_args = malloc(NUM_THREADS * sizeof(*tsp_threads_args));
        if (tsp_threads_args == NULL) {
            perror("TSP THREADS ARGS ALLOCA FAILURE\t");
            return (-1);
        }
        /* Initialize arguments and create threads */
        for (tsp_threads_iter = 0; tsp_threads_iter < NUM_THREADS;
                tsp_threads_iter++) {
            if (cursor >= buf_f1.st_size) {
                break;
            }
            tsp_threads_args[tsp_threads_iter].name_f1 = name_f1;
            tsp_threads_args[tsp_threads_iter].name_f2 = name_f2;
            tsp_threads_args[tsp_threads_iter].cursor = cursor;
            thread_c_res = pthread_create(
                               &tsp_threads[tsp_threads_iter],
                               NULL,
                               check_block_dup,
                               (void*)&tsp_threads_args[tsp_threads_iter]);
            if (thread_c_res != 0) {
                perror("THREAD CREATION FAILURE");
                return (-1);
            }
            cursor+=BLOCK_SIZE;
        }
        /* Join last threads and get their status */
        while (tsp_threads_iter-->0) {
            void *thread_res = NULL;
            thread_j_res = pthread_join(tsp_threads[tsp_threads_iter],
                                        &thread_res);
            if (thread_j_res != 0) {
                perror("THREAD JOIN FAILURE");
                return (-1);
            }
            if (strcmp((char*)thread_res, "notdup")==0) {
                loop_res++;
                /* Closing other threads and exiting by condition
                 * from loop. */
                while (tsp_threads_iter-->0) {
                    pthread_cancel(tsp_threads[tsp_threads_iter]);
                }
            }
        }
        free(tsp_threads);
        free(tsp_threads_args);
        if (loop_res > 0) {
            break;
        }
    }
    return (loop_res > 0) ? 1 : 0;
}

The function works fine (at least for what I've tested). Still, some guys from #C (freenode) suggested that the solution is overly complicated, and it may perform poorly because of parallel reading on hddisk.

What I want to know:

  • Is the threaded approach flawed by default ?
  • Is fseek() so slow ?
  • Is there a way to somehow map the files to memory and then compare them ?

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