How can I read a textfile into matlab and make it a list?
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by Ben Fossen
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Published on 2010-06-13T23:27:11Z
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2010/06/13
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I have a textfile that has the format
gene complement(22995..24539)
/gene="ppp"
/locus_tag="MRA_0020"
CDS complement(22995..24539)
/gene="ppp"
/locus_tag="MRA_0020"
/codon_start=1
/transl_table=11
/product="putative serine/threonine phosphatase Ppp"
/protein_id="ABQ71738.1"
/db_xref="GI:148503929"
gene complement(24628..25095)
/locus_tag="MRA_0021"
CDS complement(24628..25095)
/locus_tag="MRA_0021"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABQ71739.1"
/db_xref="GI:148503930"
gene complement(25219..26802)
/locus_tag="MRA_0022"
CDS complement(25219..26802)
/locus_tag="MRA_0022"
/codon_start=1
/transl_table=11
/product="hypothetical protein"
/protein_id="ABQ71740.1"
/db_xref="GI:148503931"
I would like to read the textfile into Matlab and make a list with the information from the line gene as the starting point for each item in the list. So for this example there will be 3 items in the list. I have tried a few things and cannot get this to work. Anyone have any ideas of what I can do?
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