Transient mysqlcheck errors about "size of datafile" (file too small)

Posted by Adam Backstrom on Server Fault See other posts from Server Fault or by Adam Backstrom
Published on 2011-01-16T20:32:32Z Indexed on 2011/01/16 20:54 UTC
Read the original article Hit count: 116

Filed under:

mysql

Running mysqlcheck on a live database is giving me transient errors like this one:

mydatabase.mytable
error    : Size of datafile is: 500719688         Should be: 501000484
error    : Corrupt

When I run the command again or check the table one-off using mysql, it's listed as OK. Is this just a side effect of running checks on live tables? Is it possible that data is not flushed, hence the strange discrepancy?

We moved several databases this morning by shutting down mysqld on the source and rsyncing files across to the new server, but these are all MyISAM tables so I don't believe the two things are related. (But I mention it just in case.)

Related posts about mysql

How to remove MySQL completely with config and library files on ubuntu 12.04 gnome 3.0

as seen on Ask Ubuntu - Search for 'Ask Ubuntu'
I tried everything till now: sudo apt-get remove mysql-server mysql-client mysql-common sudo apt-get purge mysql-server mysql-client mysql-common sudo apt-get autoremove and even more commands... But whenever I am trying to locate mysql. I get a no. of files related to mysql command: shell>>… >>> More
mysql: Cannot load from mysql.proc. The table is probably corrupted

as seen on Server Fault - Search for 'Server Fault'
Mysql was started: /usr/bin/mysqld_safe --datadir=/srv/mysql/myDB --log-error=/srv/mysql/logs/mysqld-myDB.log --pid-file=/srv/mysql/pids/mysqld-myDB.pid --user=mysql --socket=/srv/mysql/sockets/mysql-myDB.sock --port=3700 but when I'm trying to do something: ERROR 1548 (HY000) at line 1: Cannot… >>> More
Why is there a /etc/init.d/mysql file on this Slackware machine? How could it have gotten there?

as seen on Server Fault - Search for 'Server Fault'
A client of my IT-consulting service owns a web-development shop. He's been having problems with a Slackware 12.0 server running MySQL 5.0.67. The machine was set up by the client's sysadmin, who left on bad terms. My client no longer employs a sysadmin. As far as I can tell, the only copy of MySQL… >>> More
mysql: Bind on unix socket: Permission denied

as seen on Server Fault - Search for 'Server Fault'
Can't start mysql with: sudo /usr/bin/mysqld_safe --datadir=/srv/mysql/myDB --log-error=/srv/mysql/logs/mysqld-myDB.log --pid-file=/srv/mysql/pids/mysqld-myDB.pid --user=mysql --socket=/srv/mysql/sockets/mysql-myDB.sock --port=3700 120222 13:40:48 mysqld_safe Starting mysqld daemon with databases… >>> More
MySQL – Learning MySQL Online in 6 Hours – MySQL Fundamentals in 320 Minutes

as seen on SQL Authority - Search for 'SQL Authority'
MySQL is one of the most popular database language and I have been recently working with it a lot. Data have no barrier and every database have their own place. I have been working with MySQL for quite a while and just like SQL Server, I often find lots of people asking me if I have a tutorial which… >>> More

Developer IT