Get positions for NAs only in the "middle" of a matrix column

Posted by Abiel on Stack Overflow See other posts from Stack Overflow or by Abiel
Published on 2011-01-28T21:38:35Z Indexed on 2011/01/28 23:26 UTC
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I want to obtain an index that refers to the positions of NA values in a matrix where the index is true if a given cell is NA and there is at least one non-NA value before and after it in the column. For example, given the following matrix

     [,1] [,2] [,3] [,4]
[1,]   NA    1   NA    1
[2,]    1   NA   NA    2
[3,]   NA    2   NA    3

the only value of the index that comes back TRUE should be [2,2].

Is there a compact expression for what I want to do? If I had to I could loop through columns and use something like min(which(!is.na(x[,i]))) to find the first non-NA value in each column, and then set all values before that to FALSE (and the same for all values after the max). This way I would not select leading and trailing NA values. But this seems a bit messy, so I'm wondering if there is a cleaner expression that does this without loops.

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