We have a situation where we have an aging Windows 2003 File Server Cluster that we'd like to move to a standalone Windows Server 2008 R2 VM that resides in our Hyper-V R2 installation. We see no need to keep the Clustering as Hyper-V is now providing our Failover/Redundancy. Usually, in a standalone file server migration we migrate the data, preserving NTFS permissions and then export the sharing permissions from the registry and import them on the new server. This does not appear possible in this instance, as the 2003 cluster stores the sharing permissions quite differently. My question is, how would one perform this type of migration? Is it even possible? My current lead is the File Server Migration Toolkit, however I can find no information on the net about migrating from cluster to standalone, only the opposite. Please help.

UPDATE: We ended up getting the data copied over (permissions intact), but had to recreate the shares manually by hand. It was a bit of a pain but it did in the end work out.