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  • I need help on this data file to be edited in SOM_PAK format

    - by Mola
    Hi Experts, I am working on Self Organizing Map (SOM) Implementation and i have a microarray dataset which i am trying to read in using some_read_data function, but i keep having an errors when i edit it to have it in SOM_PAK form which is recognise by SOM for reading such as ??? Error using == somtoolbox\som_read_data.m Only 69 vector components on input file data line 1 (dimension is 70) Error in == SomMainFunction at 3 sD = som_read_data('B_r2.txt'); but when i try to read the data without editing which is the original file as shown here: http://rapidshare.com/files/376239367/DLBCL.txt.html It indicates "Data read OK", but i have the following error ??? Error using == unknown Out of memory. Type HELP MEMORY for your options. Error in == somtoolbox\som_bmus.m at 189 Bmus = zeros(dlen,length(which_bmus)); Error in == somvis\somvis_p_matrix.m at 41 [dummy dists] = som_bmus (dat, dat, 2:datlen); Error in == SomMainFunction at 16 [pheight rad_real perc] = somvis_p_matrix(sM,sD); You can get the datafile from here:http://rapidshare.com/files/376239367/DLBCL.txt.html I need someone to help me correct this data for me and put it in SOM_PAK format. I have tried getting it in SOM_PAK format, but it still giving me errors:

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  • Error " Index exceeds Matrix dimensions"

    - by Mola
    Hi experts, I am trying to read an excel 2003 file which consist of 62 columns and 2000 rows and then draw 2d dendrogram from 2000 pattern of 2 categories of a data as my plot in matlab. When i run the script, it gives me the above error. I don't know why. Anybody has any idea why i have the above error? My data is here: http://rapidshare.com/files/383549074/data.xls Please delete the 2001 column if you want to use the data for testing. and my code is here: % Script file: cluster_2d_data.m d=2000; n1=22; n2=40; N=62 Data=xlsread('data.xls','A1:BJ2000'); X=Data'; R=1:2000; C=1:2; clustergram(X,'Pdist','euclidean','Linkage','complete','Dimension',2,... 'ROWLABELS',R,'COLUMNLABELS',C,'Dendrogram',{'color',5})

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  • Is this XML file correct for RSS feeding?

    - by Hermet
    Hi guys I am generating a XML-RSS type file from PHP. The output for example is like this <?xml version="1.0" encoding="iso-8859-1"?> <rss version="2.0"> <channel> <title>Mi web mola</title> <link>http://www.dominio.com/blog.php</link> <language>es-ES</language> <description>Mallas y eso</description> <generator>Autor</generator> <item> <title>Articulo de prueba</title> <link>http://www.midominio.com/2342</link> <pubDate>14/06/2010</pubDate> <description><![CDATA[Descripcion de prueba bla bla bla]]></description> <content:encoded><![CDATA[Contenido prueba]]></content:encoded> </item> </channel> </rss> ... and all I can see in the Firefox preview is the title and the description of the blog, not the items, but in the source it appears correctly, so I've thought it must be a parse error or something like that.. What could be wrong? Again, excuse me for my bad english, and thank you very much.

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