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• Errors trying to run MongoDB

  - by SomeKittens

  I'm running Ubuntu Server 12.04 (32 bit) on an old (1998) computer. Everything's working fine until I try and start MongoDB. somekittens@DLserver01:~$ mongo MongoDB shell version: 2.2.2 connecting to: test Sun Dec 16 22:47:50 Error: couldn't connect to server 127.0.0.1:27017 src/mongo/shell/mongo.js:91 exception: connect failed Googling the error lead me to all sorts of "repair" options, none of which fixed anything. I've also removed MongoDB and installed it again (using apt-get, have not built from source). Mongo's log shows the following error: Thu Dec 13 18:36:32 warning: 32-bit servers don't have journaling enabled by default. Please use --journal if you want durability. Thu Dec 13 18:36:32 Thu Dec 13 18:36:32 [initandlisten] MongoDB starting : pid=758 port=27017 dbpath=/var/lib/mongodb 32-bit host=DLserver01 Thu Dec 13 18:36:32 [initandlisten] Thu Dec 13 18:36:32 [initandlisten] ** NOTE: when using MongoDB 32 bit, you are limited to about 2 gigabytes of data Thu Dec 13 18:36:32 [initandlisten] ** see http://blog.mongodb.org/post/137788967/32-bit-limitations Thu Dec 13 18:36:32 [initandlisten] ** with --journal, the limit is lower Thu Dec 13 18:36:32 [initandlisten] Thu Dec 13 18:36:32 [initandlisten] db version v2.2.2, pdfile version 4.5 Thu Dec 13 18:36:32 [initandlisten] git version: d1b43b61a5308c4ad0679d34b262c5af9d664267 Thu Dec 13 18:36:32 [initandlisten] build info: Linux domU-12-31-39-01-70-B4 2.6.21.7-2.fc8xen #1 SMP Fri Feb 15 12:39:36 EST 2008 i686 BOOST_LIB_VERSION=1_49 Thu Dec 13 18:36:32 [initandlisten] options: { config: "/etc/mongodb.conf", dbpath: "/var/lib/mongodb", logappend: "true", logpath: "/var/log/mongodb/mongodb.log" } Thu Dec 13 18:36:32 [initandlisten] Unable to check for journal files due to: boost::filesystem::basic_directory_iterator constructor: No such file or directory: "/var/lib/mongodb/journal" ************** Unclean shutdown detected. Please visit http://dochub.mongodb.org/core/repair for recovery instructions. ************* Thu Dec 13 18:36:32 [initandlisten] exception in initAndListen: 12596 old lock file, terminating Thu Dec 13 18:36:32 dbexit: Thu Dec 13 18:36:32 [initandlisten] shutdown: going to close listening sockets... Thu Dec 13 18:36:32 [initandlisten] shutdown: going to flush diaglog... Thu Dec 13 18:36:32 [initandlisten] shutdown: going to close sockets... Thu Dec 13 18:36:32 [initandlisten] shutdown: waiting for fs preallocator... Thu Dec 13 18:36:32 [initandlisten] shutdown: closing all files... Thu Dec 13 18:36:32 [initandlisten] closeAllFiles() finished Thu Dec 13 18:36:32 dbexit: really exiting now Running through the recovery instructions lead to the following adventure: somekittens@DLserver01:/var/log/mongodb$ mongod --repair Sun Dec 16 22:42:54 Sun Dec 16 22:42:54 warning: 32-bit servers don't have journaling enabled by default. Please use --journal if you want durability. Sun Dec 16 22:42:54 Sun Dec 16 22:42:54 [initandlisten] MongoDB starting : pid=1887 port=27017 dbpath=/data/db/ 32-bit host=DLserver01 Sun Dec 16 22:42:54 [initandlisten] Sun Dec 16 22:42:54 [initandlisten] ** NOTE: when using MongoDB 32 bit, you are limited to about 2 gigabytes of data Sun Dec 16 22:42:54 [initandlisten] ** see http://blog.mongodb.org/post/137788967/32-bit-limitations Sun Dec 16 22:42:54 [initandlisten] ** with --journal, the limit is lower Sun Dec 16 22:42:54 [initandlisten] Sun Dec 16 22:42:54 [initandlisten] db version v2.2.2, pdfile version 4.5 Sun Dec 16 22:42:54 [initandlisten] git version: d1b43b61a5308c4ad0679d34b262c5af9d664267 Sun Dec 16 22:42:54 [initandlisten] build info: Linux domU-12-31-39-01-70-B4 2.6.21.7-2.fc8xen #1 SMP Fri Feb 15 12:39:36 EST 2008 i686 BOOST_LIB_VERSION=1_49 Sun Dec 16 22:42:54 [initandlisten] options: { repair: true } Sun Dec 16 22:42:54 [initandlisten] exception in initAndListen: 10296 ********************************************************************* ERROR: dbpath (/data/db/) does not exist. Create this directory or give existing directory in --dbpath. See http://dochub.mongodb.org/core/startingandstoppingmongo ********************************************************************* , terminating Sun Dec 16 22:42:54 dbexit: Sun Dec 16 22:42:54 [initandlisten] shutdown: going to close listening sockets... Sun Dec 16 22:42:54 [initandlisten] shutdown: going to flush diaglog... Sun Dec 16 22:42:54 [initandlisten] shutdown: going to close sockets... Sun Dec 16 22:42:54 [initandlisten] shutdown: waiting for fs preallocator... Sun Dec 16 22:42:54 [initandlisten] shutdown: closing all files... Sun Dec 16 22:42:54 [initandlisten] closeAllFiles() finished Sun Dec 16 22:42:54 dbexit: really exiting now somekittens@DLserver01:/var/log/mongodb$ sudo mkdir /data somekittens@DLserver01:/var/log/mongodb$ sudo mkdir /data/db somekittens@DLserver01:/var/log/mongodb$ mongod --repair Sun Dec 16 22:43:51 Sun Dec 16 22:43:51 warning: 32-bit servers don't have journaling enabled by default. Please use --journal if you want durability. Sun Dec 16 22:43:51 Sun Dec 16 22:43:51 [initandlisten] MongoDB starting : pid=1909 port=27017 dbpath=/data/db/ 32-bit host=DLserver01 Sun Dec 16 22:43:51 [initandlisten] Sun Dec 16 22:43:51 [initandlisten] ** NOTE: when using MongoDB 32 bit, you are limited to about 2 gigabytes of data Sun Dec 16 22:43:51 [initandlisten] ** see http://blog.mongodb.org/post/137788967/32-bit-limitations Sun Dec 16 22:43:51 [initandlisten] ** with --journal, the limit is lower Sun Dec 16 22:43:51 [initandlisten] Sun Dec 16 22:43:51 [initandlisten] db version v2.2.2, pdfile version 4.5 Sun Dec 16 22:43:51 [initandlisten] git version: d1b43b61a5308c4ad0679d34b262c5af9d664267 Sun Dec 16 22:43:51 [initandlisten] build info: Linux domU-12-31-39-01-70-B4 2.6.21.7-2.fc8xen #1 SMP Fri Feb 15 12:39:36 EST 2008 i686 BOOST_LIB_VERSION=1_49 Sun Dec 16 22:43:51 [initandlisten] options: { repair: true } Sun Dec 16 22:43:51 [initandlisten] exception in initAndListen: 10309 Unable to create/open lock file: /data/db/mongod.lock errno:13 Permission denied Is a mongod instance already running?, terminating Sun Dec 16 22:43:51 dbexit: Sun Dec 16 22:43:51 [initandlisten] shutdown: going to close listening sockets... Sun Dec 16 22:43:51 [initandlisten] shutdown: going to flush diaglog... Sun Dec 16 22:43:51 [initandlisten] shutdown: going to close sockets... Sun Dec 16 22:43:51 [initandlisten] shutdown: waiting for fs preallocator... Sun Dec 16 22:43:51 [initandlisten] shutdown: closing all files... Sun Dec 16 22:43:51 [initandlisten] closeAllFiles() finished Sun Dec 16 22:43:51 [initandlisten] shutdown: removing fs lock... Sun Dec 16 22:43:51 [initandlisten] couldn't remove fs lock errno:9 Bad file descriptor Sun Dec 16 22:43:51 dbexit: really exiting now somekittens@DLserver01:/var/log/mongodb$ service mongodb stop stop: Unknown instance: somekittens@DLserver01:/var/log/mongodb$ sudo mongod --repair Sun Dec 16 22:45:04 Sun Dec 16 22:45:04 warning: 32-bit servers don't have journaling enabled by default. Please use --journal if you want durability. Sun Dec 16 22:45:04 Sun Dec 16 22:45:04 [initandlisten] MongoDB starting : pid=1921 port=27017 dbpath=/data/db/ 32-bit host=DLserver01 Sun Dec 16 22:45:04 [initandlisten] Sun Dec 16 22:45:04 [initandlisten] ** NOTE: when using MongoDB 32 bit, you are limited to about 2 gigabytes of data Sun Dec 16 22:45:04 [initandlisten] ** see http://blog.mongodb.org/post/137788967/32-bit-limitations Sun Dec 16 22:45:04 [initandlisten] ** with --journal, the limit is lower Sun Dec 16 22:45:04 [initandlisten] Sun Dec 16 22:45:04 [initandlisten] db version v2.2.2, pdfile version 4.5 Sun Dec 16 22:45:04 [initandlisten] git version: d1b43b61a5308c4ad0679d34b262c5af9d664267 Sun Dec 16 22:45:04 [initandlisten] build info: Linux domU-12-31-39-01-70-B4 2.6.21.7-2.fc8xen #1 SMP Fri Feb 15 12:39:36 EST 2008 i686 BOOST_LIB_VERSION=1_49 Sun Dec 16 22:45:04 [initandlisten] options: { repair: true } Sun Dec 16 22:45:04 [initandlisten] Unable to check for journal files due to: boost::filesystem::basic_directory_iterator constructor: No such file or directory: "/data/db/journal" Sun Dec 16 22:45:04 [initandlisten] finished checking dbs Sun Dec 16 22:45:04 dbexit: Sun Dec 16 22:45:04 [initandlisten] shutdown: going to close listening sockets... Sun Dec 16 22:45:04 [initandlisten] shutdown: going to flush diaglog... Sun Dec 16 22:45:04 [initandlisten] shutdown: going to close sockets... Sun Dec 16 22:45:04 [initandlisten] shutdown: waiting for fs preallocator... Sun Dec 16 22:45:04 [initandlisten] shutdown: closing all files... Sun Dec 16 22:45:04 [initandlisten] closeAllFiles() finished Sun Dec 16 22:45:04 [initandlisten] shutdown: removing fs lock... Sun Dec 16 22:45:04 dbexit: really exiting now Which didn't change anything. What can I do to resolve this? It's an old computer (640MB RAM, single-core P2). Could that be causing it?

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• Segfaulting Java process

  - by zenmonkey

  I've a java process that is working on some large data set in memory. I've seen it crash with a SIGSEGV signal sometimes, so i was wondering some potential causes and fixes could do. Caues: - JVM bug - Native library bug (e.g pthreads etc) - JNI bug in user code Fixes: - Upgrade to new JVM In my particular case, this is the output form the log file (pruned) A fatal error has been detected by the Java Runtime Environment: # SIGSEGV (0xb) at pc=0x00002aaaaacd1b94, pid=32116, tid=1086544208 # JRE version: 6.0_14-b08 Java VM: Java HotSpot(TM) 64-Bit Server VM (14.0-b16 mixed mode linux-amd64 ) Problematic frame: C [libpthread.so.0+0xab94] pthread_cond_timedwait+0x154 # If you would like to submit a bug report, please visit: http://java.sun.com/webapps/bugreport/crash.jsp # --------------- T H R E A D --------------- Current thread (0x00002aacaad41000): WatcherThread [stack: 0x0000000040b35000,0x0000000040c36000] [id=32141] siginfo:si_signo=SIGSEGV: si_errno=0, si_code=1 (SEGV_MAPERR), si_addr=0x00002aabc40008c0 Registers: RAX=0x0000000000000000, RBX=0x0000000000000000, RCX=0x0000000000000000, RDX=0x0000000000000002 RSP=0x0000000040c34cc0, RBP=0x0000000040c34d80, RSI=0x0000000000000001, RDI=0x00002aabc40008c0 R8 =0x00002aacaad42528, R9 =0x0000000000000000, R10=0x0000000040c34cd8, R11=0x0000000000000202 R12=0x0000000000000001, R13=0x0000000040c34d40, R14=0xffffffffffffff92, R15=0x00002aacaad42550 RIP=0x00002aaaaacd1b94, EFL=0x0000000000010246, CSGSFS=0x000000000000e033, ERR=0x0000000000000006 TRAPNO=0x000000000000000e Top of Stack: (sp=0x0000000040c34cc0) 0x0000000040c34cc0: 0000000000000000 00002aabc40008c0 0x0000000040c34cd0: 00002aacaad42528 0000000000000000 0x0000000040c34ce0: 0000000002fae0e0 0000000000000000 0x0000000040c34cf0: 00002aaaaacd1750 0000000040c34cc0 0x0000000040c34d00: 00002aacaad42528 0000000000000000 0x0000000040c34d10: 00002aacaad42528 00002aacaad42500 0x0000000040c34d20: 0000000000000032 00002aaaabadf876 0x0000000040c34d30: fffffffdaad40e80 0000000040c34d40 0x0000000040c34d40: 000000004bbb7166 0000000015f07098 0x0000000040c34d50: 0000000040c34d80 00138cd32df59cce 0x0000000040c34d60: 431bde82d7b634db 00002aacaad429c0 0x0000000040c34d70: 0000000000000032 00002aacaad429c0 0x0000000040c34d80: 0000000040c34e00 00002aaaabadda6d 0x0000000040c34d90: 0000000040c34da0 00002aacaad42500 0x0000000040c34da0: 00002aacaad429c0 00002aaa00000002 0x0000000040c34db0: 0000000000000001 0000000000000002 0x0000000040c34dc0: 0000000040c34dd0 00002aaaabb6f613 0x0000000040c34dd0: 0000000040c34e00 00002aacaad41000 0x0000000040c34de0: 0000000000000032 00002aacaad429c0 0x0000000040c34df0: 00002aacaad41000 0000000000001000 0x0000000040c34e00: 0000000040c34e60 00002aaaabbc39fb 0x0000000040c34e10: 0000000040c34e40 00002aaaabab868f 0x0000000040c34e20: 00002aacaad41000 00002aacaad42aa0 0x0000000040c34e30: 00002aacaad42aa0 00002aaaabe10630 0x0000000040c34e40: 00002aaaabe10630 00002aacaad42aa0 0x0000000040c34e50: 00002aacaad429c0 00002aacaad41000 0x0000000040c34e60: 0000000040c35130 00002aaaabadff9f 0x0000000040c34e70: 0000000000000000 0000000000000000 0x0000000040c34e80: 0000000000000000 0000000000000000 0x0000000040c34e90: 0000000000000000 0000000000000000 0x0000000040c34ea0: 0000000000000000 0000000000000000 0x0000000040c34eb0: 0000000000000000 0000000000000000 Instructions: (pc=0x00002aaaaacd1b94) 0x00002aaaaacd1b84: 88 22 00 00 48 8b 7c 24 08 be 01 00 00 00 31 c0 0x00002aaaaacd1b94: f0 0f b1 37 0f 85 e8 00 00 00 8b 57 2c 48 8b 47 Stack: [0x0000000040b35000,0x0000000040c36000], sp=0x0000000040c34cc0, free space=1023k Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code) C [libpthread.so.0+0xab94] pthread_cond_timedwait+0x154 V [libjvm.so+0x594a6d] V [libjvm.so+0x67a9fb] V [libjvm.so+0x596f9f] --------------- P R O C E S S --------------- Java Threads: ( = current thread ) 0x00002aacaad3f000 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=32140, stack(0x0000000040a34000,0x0000000040b35000)] 0x00002aacaad3c000 JavaThread "CompilerThread1" daemon [_thread_blocked, id=32139, stack(0x0000000040933000,0x0000000040a34000)] 0x00002aacaad37800 JavaThread "CompilerThread0" daemon [_thread_blocked, id=32138, stack(0x0000000040832000,0x0000000040933000)] 0x00002aacaad36800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=32137, stack(0x0000000040731000,0x0000000040832000)] 0x00002aacaab7d800 JavaThread "Finalizer" daemon [_thread_blocked, id=32136, stack(0x0000000040630000,0x0000000040731000)] 0x00002aacaab7b800 JavaThread "Reference Handler" daemon [_thread_blocked, id=32135, stack(0x000000004052f000,0x0000000040630000)] 0x0000000040115800 JavaThread "main" [_thread_blocked, id=32117, stack(0x000000004012b000,0x000000004022c000)] Other Threads: 0x00002aacaab75000 VMThread [stack: 0x000000004042e000,0x000000004052f000] [id=32134] =0x00002aacaad41000 WatcherThread [stack: 0x0000000040b35000,0x0000000040c36000] [id=32141] VM state:at safepoint (normal execution) VM Mutex/Monitor currently owned by a thread: ([mutex/lock_event]) [0x0000000040112e80] Threads_lock - owner thread: 0x00002aacaab75000 [0x0000000040113380] Heap_lock - owner thread: 0x0000000040115800 Heap PSYoungGen total 1854528K, used 1029248K [0x00002aac025a0000, 0x00002aaca8340000, 0x00002aaca9040000) eden space 1029248K, 100% used [0x00002aac025a0000,0x00002aac412c0000,0x00002aac412c0000) from space 825280K, 0% used [0x00002aac412c0000,0x00002aac412c0000,0x00002aac738b0000) to space 812800K, 0% used [0x00002aac76980000,0x00002aac76980000,0x00002aaca8340000) PSOldGen total 4423680K, used 4423651K [0x00002aaab5040000, 0x00002aabc3040000, 0x00002aac025a0000) object space 4423680K, 99% used [0x00002aaab5040000,0x00002aabc3038fe8,0x00002aabc3040000) PSPermGen total 21248K, used 5848K [0x00002aaaafc40000, 0x00002aaab1100000, 0x00002aaab5040000) object space 21248K, 27% used [0x00002aaaafc40000,0x00002aaab01f61f0,0x00002aaab1100000) Dynamic libraries: 40000000-40009000 r-xp 00000000 08:01 313415 /usr/java/jdk1.6.0_14/bin/java 40108000-4010a000 rwxp 00008000 08:01 313415 /usr/java/jdk1.6.0_14/bin/java 4010a000-4012b000 rwxp 4010a000 00:00 0 [heap] 4012b000-4012e000 ---p 4012b000 00:00 0 4012e000-4022c000 rwxp 4012e000 00:00 0 4022c000-4022d000 ---p 4022c000 00:00 0 4022d000-4032d000 rwxp 4022d000 00:00 0 4032d000-4032e000 ---p 4032d000 00:00 0 4032e000-4042e000 rwxp 4032e000 00:00 0 4042e000-4042f000 ---p 4042e000 00:00 0 4042f000-4052f000 rwxp 4042f000 00:00 0 4052f000-40532000 ---p 4052f000 00:00 0 40532000-40630000 rwxp 40532000 00:00 0 40630000-40633000 ---p 40630000 00:00 0 40633000-40731000 rwxp 40633000 00:00 0 40731000-40734000 ---p 40731000 00:00 0 40734000-40832000 rwxp 40734000 00:00 0 40832000-40835000 ---p 40832000 00:00 0 40835000-40933000 rwxp 40835000 00:00 0 40933000-40936000 ---p 40933000 00:00 0 40936000-40a34000 rwxp 40936000 00:00 0 40a34000-40a37000 ---p 40a34000 00:00 0 40a37000-40b35000 rwxp 40a37000 00:00 0 40b35000-40b36000 ---p 40b35000 00:00 0 40b36000-40c36000 rwxp 40b36000 00:00 0 2aaaaaaab000-2aaaaaac6000 r-xp 00000000 08:01 49198 /lib64/ld-2.7.so 2aaaaaac6000-2aaaaaac7000 rwxp 2aaaaaac6000 00:00 0 2aaaaaac7000-2aaaaaad0000 r-xs 0006d000 08:10 29851669 /mnt/home/jatten/workspace/common/build/lib/common.jar 2aaaaaad2000-2aaaaaad3000 rwxp 2aaaaaad2000 00:00 0 2aaaaaad3000-2aaaaaae0000 r-xp 00000000 08:01 315357 /usr/java/jdk1.6.0_14/jre/lib/amd64/libverify.so 2aaaaaae0000-2aaaaabdf000 ---p 0000d000 08:01 315357 /usr/java/jdk1.6.0_14/jre/lib/amd64/libverify.so 2aaaaabdf000-2aaaaabe2000 rwxp 0000c000 08:01 315357 /usr/java/jdk1.6.0_14/jre/lib/amd64/libverify.so 2aaaaabe2000-2aaaaac0a000 rwxp 2aaaaabe2000 00:00 0 2aaaaac0a000-2aaaaac0f000 r-xs 0003a000 08:10 30326840 /mnt/home/jatten/workspace/common_ml20010405/build/lib/common_ml.jar 2aaaaac0f000-2aaaaac12000 r-xs 00020000 08:10 29786222 /mnt/home/jatten/pagescorer.jar 2aaaaacc5000-2aaaaacc6000 r-xp 0001a000 08:01 49198 /lib64/ld-2.7.so 2aaaaacc6000-2aaaaacc7000 rwxp 0001b000 08:01 49198 /lib64/ld-2.7.so 2aaaaacc7000-2aaaaacdd000 r-xp 00000000 08:01 49280 /lib64/libpthread-2.7.so 2aaaaacdd000-2aaaaaedc000 ---p 00016000 08:01 49280 /lib64/libpthread-2.7.so 2aaaaaedc000-2aaaaaedd000 r-xp 00015000 08:01 49280 /lib64/libpthread-2.7.so 2aaaaaedd000-2aaaaaede000 rwxp 00016000 08:01 49280 /lib64/libpthread-2.7.so 2aaaaaede000-2aaaaaee2000 rwxp 2aaaaaede000 00:00 0 2aaaaaee2000-2aaaaaee9000 r-xp 00000000 08:01 315360 /usr/java/jdk1.6.0_14/jre/lib/amd64/jli/libjli.so 2aaaaaee9000-2aaaaafea000 ---p 00007000 08:01 315360 /usr/java/jdk1.6.0_14/jre/lib/amd64/jli/libjli.so 2aaaaafea000-2aaaaafec000 rwxp 00008000 08:01 315360 /usr/java/jdk1.6.0_14/jre/lib/amd64/jli/libjli.so 2aaaaafec000-2aaaaafee000 r-xp 00000000 08:01 49240 /lib64/libdl-2.7.so 2aaaaafee000-2aaaab1ee000 ---p 00002000 08:01 49240 /lib64/libdl-2.7.so 2aaaab1ee000-2aaaab1ef000 r-xp 00002000 08:01 49240 /lib64/libdl-2.7.so 2aaaab1ef000-2aaaab1f0000 rwxp 00003000 08:01 49240 /lib64/libdl-2.7.so 2aaaab1f0000-2aaaab1f1000 rwxp 2aaaab1f0000 00:00 0 2aaaab1f1000-2aaaab33e000 r-xp 00000000 08:01 49219 /lib64/libc-2.7.so 2aaaab33e000-2aaaab53e000 ---p 0014d000 08:01 49219 /lib64/libc-2.7.so 2aaaab53e000-2aaaab542000 r-xp 0014d000 08:01 49219 /lib64/libc-2.7.so 2aaaab542000-2aaaab543000 rwxp 00151000 08:01 49219 /lib64/libc-2.7.so 2aaaab543000-2aaaab549000 rwxp 2aaaab543000 00:00 0 2aaaab549000-2aaaabca7000 r-xp 00000000 08:01 315371 /usr/java/jdk1.6.0_14/jre/lib/amd64/server/libjvm.so 2aaaabca7000-2aaaabda6000 ---p 0075e000 08:01 315371 /usr/java/jdk1.6.0_14/jre/lib/amd64/server/libjvm.so 2aaaabda6000-2aaaabf1e000 rwxp 0075d000 08:01 315371 /usr/java/jdk1.6.0_14/jre/lib/amd64/server/libjvm.so 2aaaabf1e000-2aaaabf5c000 rwxp 2aaaabf1e000 00:00 0 2aaaabf67000-2aaaabfe9000 r-xp 00000000 08:01 49263 /lib64/libm-2.7.so 2aaaabfe9000-2aaaac1e8000 ---p 00082000 08:01 49263 /lib64/libm-2.7.so 2aaaac1e8000-2aaaac1e9000 r-xp 00081000 08:01 49263 /lib64/libm-2.7.so 2aaaac1e9000-2aaaac1ea000 rwxp 00082000 08:01 49263 /lib64/libm-2.7.so 2aaaac1ea000-2aaaac1f2000 r-xp 00000000 08:01 49283 /lib64/librt-2.7.so 2aaaac1f2000-2aaaac3f1000 ---p 00008000 08:01 49283 /lib64/librt-2.7.so 2aaaac3f1000-2aaaac3f2000 r-xp 00007000 08:01 49283 /lib64/librt-2.7.so 2aaaac3f2000-2aaaac3f3000 rwxp 00008000 08:01 49283 /lib64/librt-2.7.so 2aaaac3f3000-2aaaac41c000 r-xp 00000000 08:01 315336 /usr/java/jdk1.6.0_14/jre/lib/amd64/libjava.so 2aaaac41c000-2aaaac51b000 ---p 00029000 08:01 315336 /usr/java/jdk1.6.0_14/jre/lib/amd64/libjava.so 2aaaac51b000-2aaaac522000 rwxp 00028000 08:01 315336 /usr/java/jdk1.6.0_14/jre/lib/amd64/libjava.so 2aaaac522000-2aaaac523000 ---p 2aaaac522000 00:00 0 2aaaac523000-2aaaac524000 rwxp 2aaaac523000 00:00 0 2aaaac52d000-2aaaac542000 r-xp 00000000 08:01 49265 /lib64/libnsl-2.7.so 2aaaac542000-2aaaac741000 ---p 00015000 08:01 49265 /lib64/libnsl-2.7.so 2aaaac741000-2aaaac742000 r-xp 00014000 08:01 49265 /lib64/libnsl-2.7.so 2aaaac742000-2aaaac743000 rwxp 00015000 08:01 49265 /lib64/libnsl-2.7.so 2aaaac743000-2aaaac745000 rwxp 2aaaac743000 00:00 0 2aaaac745000-2aaaac74c000 r-xp 00000000 08:01 315362 /usr/java/jdk1.6.0_14/jre/lib/amd64/native_threads/libhpi.so 2aaaac74c000-2aaaac84d000 ---p 00007000 08:01 315362 /usr/java/jdk1.6.0_14/jre/lib/amd64/native_threads/libhpi.so 2aaaac84d000-2aaaac84f000 rwxp 00008000 08:01 315362 /usr/java/jdk1.6.0_14/jre/lib/amd64/native_threads/libhpi.so 2aaaac84f000-2aaaac850000 rwxp 2aaaac84f000 00:00 0 2aaaac850000-2aaaac858000 rwxs 00000000 08:01 229379 /tmp/hsperfdata_jatten/32116 2aaaac85b000-2aaaac865000 r-xp 00000000 08:01 49269 /lib64/libnss_files-2.7.so 2aaaac865000-2aaaaca64000 ---p 0000a000 08:01 49269 /lib64/libnss_files-2.7.so 2aaaaca64000-2aaaaca65000 r-xp 00009000 08:01 49269 /lib64/libnss_files-2.7.so 2aaaaca65000-2aaaaca66000 rwxp 0000a000 08:01 49269 /lib64/libnss_files-2.7.so 2aaaaca66000-2aaaaca74000 r-xp 00000000 08:01 315358 /usr/java/jdk1.6.0_14/jre/lib/amd64/libzip.so 2aaaaca74000-2aaaacb76000 ---p 0000e000 08:01 315358 /usr/java/jdk1.6.0_14/jre/lib/amd64/libzip.so 2aaaacb76000-2aaaacb79000 rwxp 00010000 08:01 315358 /usr/java/jdk1.6.0_14/jre/lib/amd64/libzip.so 2aaaacb79000-2aaaacdea000 rwxp 2aaaacb79000 00:00 0 2aaaacdea000-2aaaafb7a000 rwxp 2aaaacdea000 00:00 0 2aaaafb7a000-2aaaafb84000 rwxp 2aaaafb7a000 00:00 0 2aaaafb84000-2aaaafc3a000 rwxp 2aaaafb84000 00:00 0 2aaaafc40000-2aaab1100000 rwxp 2aaaafc40000 00:00 0 2aaab1100000-2aaab5040000 rwxp 2aaab1100000 00:00 0 2aaab5040000-2aabc3040000 rwxp 2aaab5040000 00:00 0 2aac025a0000-2aaca8340000 rwxp 2aac025a0000 00:00 0 2aaca8340000-2aaca9040000 rwxp 2aaca8340000 00:00 0 2aaca9040000-2aaca904b000 rwxp 2aaca9040000 00:00 0 2aaca904b000-2aaca906a000 rwxp 2aaca904b000 00:00 0 2aaca906a000-2aaca98da000 rwxp 2aaca906a000 00:00 0 2aaca98da000-2aaca9ad4000 rwxp 2aaca98da000 00:00 0 2aaca9ad4000-2aacaa004000 rwxp 2aaca9ad4000 00:00 0 2aacaa004000-2aacaa00a000 rwxp 2aacaa004000 00:00 0 2aacaa00a000-2aacaa87b000 rwxp 2aacaa00a000 00:00 0 2aacaa87b000-2aacaaa76000 rwxp 2aacaa87b000 00:00 0 2aacaaa76000-2aacaaa81000 rwxp 2aacaaa76000 00:00 0 2aacaaa81000-2aacaaaa0000 rwxp 2aacaaa81000 00:00 0 2aacaaaa0000-2aacaaba0000 rwxp 2aacaaaa0000 00:00 0 2aacaaba0000-2aacaad36000 r-xs 02fb1000 08:01 315318 /usr/java/jdk1.6.0_14/jre/lib/rt.jar 2aacaad36000-2aacaaf36000 rwxp 2aacaad36000 00:00 0 2aacaaf36000-2aacaaf49000 r-xp 00000000 08:01 315349 /usr/java/jdk1.6.0_14/jre/lib/amd64/libnet.so 2aacaaf49000-2aacab04a000 ---p 00013000 08:01 315349 /usr/java/jdk1.6.0_14/jre/lib/amd64/libnet.so 2aacab04a000-2aacab04d000 rwxp 00014000 08:01 315349 /usr/java/jdk1.6.0_14/jre/lib/amd64/libnet.so 2aacab058000-2aacab05c000 r-xp 00000000 08:01 49268 /lib64/libnss_dns-2.7.so 2aacab05c000-2aacab25b000 ---p 00004000 08:01 49268 /lib64/libnss_dns-2.7.so 2aacab25b000-2aacab25c000 r-xp 00003000 08:01 49268 /lib64/libnss_dns-2.7.so 2aacab25c000-2aacab25d000 rwxp 00004000 08:01 49268 /lib64/libnss_dns-2.7.so 2aacab25d000-2aacab26e000 r-xp 00000000 08:01 49282 /lib64/libresolv-2.7.so 2aacab26e000-2aacab46e000 ---p 00011000 08:01 49282 /lib64/libresolv-2.7.so 2aacab46e000-2aacab46f000 r-xp 00011000 08:01 49282 /lib64/libresolv-2.7.so 2aacab46f000-2aacab470000 rwxp 00012000 08:01 49282 /lib64/libresolv-2.7.so 2aacab470000-2aacab572000 rwxp 2aacab470000 00:00 0 2aacab572000-2aacab57e000 r-xs 00081000 08:10 29851828 /mnt/home/jatten/workspace/common/lib/google-collect-1.0.jar 2aacab57e000-2aacab585000 r-xs 000aa000 08:10 29851946 /mnt/home/jatten/workspace/common/lib/mysql-connector-java-5.1.8-bin.jar 2aacab585000-2aacab58d000 r-xs 00028000 08:10 29851949 /mnt/home/jatten/workspace/common/lib/xml-apis.jar 2aacab58d000-2aacab591000 r-xs 0002f000 08:10 29851947 /mnt/home/jatten/workspace/common/lib/commons-beanutils-core-1.8.2.jar 2aacab591000-2aacab59e000 r-xs 0007f000 08:10 29851943 /mnt/home/jatten/workspace/common/lib/commons-collections-3.2.jar 2aacab59e000-2aacab5a3000 r-xs 00026000 08:10 29851942 /mnt/home/jatten/workspace/common/lib/httpcore-4.0.jar 2aacab5a3000-2aacab5a9000 r-xs 00030000 08:10 29851932 /mnt/home/jatten/workspace/common/lib/junit-dep-4.8.1.jar 2aacab5a9000-2aacab5ac000 r-xs 00011000 08:10 29851922 /mnt/home/jatten/workspace/common/lib/servlet.jar 2aacab5ac000-2aacab5ae000 r-xs 00009000 08:10 29851937 /mnt/home/jatten/workspace/common/lib/gsb.jar 2aacab5ae000-2aacab5b5000 r-xs 00059000 08:10 29851930 /mnt/home/jatten/workspace/common/lib/log4j-1.2.15.jar 2aacab5b5000-2aacab6b5000 rwxp 2aacab5b5000 00:00 0 2aacab6b5000-2aacab6b7000 r-xs 00009000 08:10 29851956 /mnt/home/jatten/workspace/common/lib/gsb-src.jar 2aacab6b7000-2aacab7b7000 rwxp 2aacab6b7000 00:00 0 2aacab7b7000-2aacab7cf000 r-xs 00115000 08:10 29851938 /mnt/home/jatten/workspace/common/lib/xercesImpl.jar 2aacab7cf000-2aacab7d1000 r-xs 00009000 08:10 29851957 /mnt/home/jatten/workspace/common/lib/velocity-tools-view-1.0.jar 2aacab7d1000-2aacab7d3000 r-xs 00009000 08:10 29851939 /mnt/home/jatten/workspace/common/lib/commons-cli-1.2.jar 2aacab7d3000-2aacab7d9000 r-xs 00034000 08:10 29851955 /mnt/home/jatten/workspace/common/lib/junit-4.8.1.jar 2aacab7d9000-2aacab7db000 r-xs 0000e000 08:10 29851917 /mnt/home/jatten/workspace/common/lib/jakarta-oro-2.0.8.jar 2aacab7db000-2aacab858000 r-xs 0031d000 08:10 29851916 /mnt/home/jatten/workspace/common/lib/poi-ooxml-schemas-3.6-20091214.jar 2aacab858000-2aacab85c000 r-xs 00028000 08:10 29851936 /mnt/home/jatten/workspace/common/lib/httpcore-nio-4.0.jar 2aacab85c000-2aacab85e000 r-xs 00005000 08:10 29851940 /mnt/home/jatten/workspace/common/lib/commons-beanutils-bean-collections-1.8.2.jar 2aacab85e000-2aacab864000 r-xs 00059000 08:10 29851919 /mnt/home/jatten/workspace/common/lib/mail-1.4.jar 2aacab864000-2aacab866000 r-xs 0000d000 08:10 29851950 /mnt/home/jatten/workspace/common/lib/commons-logging-1.1.1.jar 2aacab866000-2aacab86c000 r-xs 00045000 08:10 29851924 /mnt/home/jatten/workspace/common/lib/commons-httpclient-3.1.jar 2aacab86c000-2aacab877000 r-xs 00074000 08:10 29851931 /mnt/home/jatten/workspace/common/lib/velocity-dep-1.4.jar 2aacab877000-2aacab87f000 r-xs 00051000 08:10 29851954 /mnt/home/jatten/workspace/common/lib/velocity-1.4.jar 2aacab87f000-2aacab884000 r-xs 00034000 08:10 29851958 /mnt/home/jatten/workspace/common/lib/commons-beanutils-1.8.2.jar 2aacab884000-2aacab889000 r-xs 00048000 08:10 29851918 /mnt/home/jatten/workspace/common/lib/dom4j-1.6.1.jar 2aacab889000-2aacab8c6000 r-xs 0024f000 08:10 29851914 /mnt/home/jatten/workspace/common/lib/xmlbeans-2.3.0.jar 2aacab8c6000-2aacab8cb000 r-xs 00033000 08:10 29851929 /mnt/home/jatten/workspace/common/lib/xmemcached-1.2.3.jar 2aacab8cb000-2aacab8cd000 r-xs 00005000 08:10 29851928 /mnt/home/jatten/workspace/common/lib/org.hamcrest.core_1.1.0.v20090501071000.jar 2aacab8cd000-2aacab8d0000 r-xs 0000a000 08:10 29851944 /mnt/home/jatten/workspace/common/lib/persistence-api-1.0.jar 2aacab8d0000-2aacab8d6000 r-xs 0005f000 08:10 29851926 /mnt/home/jatten/workspace/common/lib/poi-ooxml-3.6-20091214.jar 2aacab8d6000-2aacab8d7000 r-xs 0002b000 08:10 29851951 /mnt/home/jatten/workspace/common/lib/maxmind.jar 2aacab8d7000-2aacab8d8000 r-xs 00002000 08:10 29851935 /mnt/home/jatten/workspace/common/lib/jackson-jaxrs-1.2.0.jar 2aacab8d8000-2aacab8d9000 r-xs 00002000 08:10 29851913 /mnt/home/jatten/workspace/common/lib/slf4j-log4j12-1.5.6.jar 2aacab8d9000-2aacab8dd000 r-xs 00025000 08:10 29851945 /mnt/home/jatten/workspace/common/lib/yanf4j-1.1.1.jar 2aacab8dd000-2aacab8df000 r-xs 00003000 08:10 29851952 /mnt/home/jatten/workspace/common/lib/clickstream-1.0.2.jar 2aacab8df000-2aacab8e1000 r-xs 00004000 08:10 29851953 /mnt/home/jatten/workspace/common/lib/slf4j-api-1.5.6.jar 2aacab8e1000-2aacab8e9000 r-xs 0004d000 08:10 29851920 /mnt/home/jatten/workspace/common/lib/jackson-mapper-asl-1.2.0.jar 2aacab8e9000-2aacab8ed000 r-xs 0001f000 08:10 29851925 /mnt/home/jatten/workspace/common/lib/jackson-core-asl-1.2.0.jar 2aacab8ed000-2aacab8f1000 r-xs 0001b000 08:10 29851912 /mnt/home/jatten/workspace/common/lib/oscache-2.3.jar 2aacab8f1000-2aacab90c000 r-xs 0015d000 08:10 29851927 /mnt/home/jatten/workspace/common/lib/poi-3.6-20091214.jar 2aacab90c000-2aacab911000 r-xs 00040000 08:10 29851831 /mnt/home/jatten/workspace/common/lib/commons-lang-2.5.jar 2aacab911000-2aacab914000 r-xs 00012000 08:10 29851923 /mnt/home/jatten/workspace/common/lib/jgooglesafebrowser-0.1a.2.jar 2aacab914000-2aacab918000 r-xs 00023000 08:10 29851933 /mnt/home/jatten/workspace/common/lib/gson-1.3.jar 2aacab918000-2aacabb18000 rwxp 2aacab918000 00:00 0 2aacabb82000-2aacabd82000 rwxp 2aacabb82000 00:00 0 2aacabe05000-2aacaf204000 rwxp 2aacabe05000 00:00 0 7fffaa12a000-7fffaa141000 rwxp 7fffaa12a000 00:00 0 [stack] ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vdso] VM Arguments: jvm_args: -Xmx8000M java_command: com.scorers.ModelImplementingPageScorer -t data/data/golds/adult.all.json -b 18 -s data/models/pagetext.binary. adult.april6.all.model -m com.models.MultiClassUpdateableModel -p 30 --goldsilver -v --cat adult --fakeinput -e /mnt/tmp/xyz.15647.pageo bjects.txt -o Launcher Type: SUN_STANDARD Environment Variables: JAVA_HOME=/usr/java/jdk1.6.0_14 PATH=/usr/kerberos/bin:/usr/local/bin:/bin:/usr/bin:/home/jatten/bin LD_LIBRARY_PATH=/usr/java/jdk1.6.0_14/jre/lib/amd64/server:/usr/java/jdk1.6.0_14/jre/lib/amd64:/usr/java/jdk1.6.0_14/jre/../lib/amd64 SHELL=/bin/bash Signal Handlers: SIGSEGV: [libjvm.so+0x6bd980], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGBUS: [libjvm.so+0x6bd980], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGFPE: [libjvm.so+0x594cc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGPIPE: [libjvm.so+0x594cc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGXFSZ: [libjvm.so+0x594cc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGILL: [libjvm.so+0x594cc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, sa_flags=0x00000000 SIGUSR2: [libjvm.so+0x597480], sa_mask[0]=0x00000000, sa_flags=0x10000004 SIGHUP: [libjvm.so+0x5971d0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGINT: [libjvm.so+0x5971d0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGTERM: [libjvm.so+0x5971d0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGQUIT: [libjvm.so+0x5971d0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 --------------- S Y S T E M --------------- OS:Fedora release 8 (Werewolf) uname:Linux 2.6.21.7-2.fc8xen #1 SMP Fri Feb 15 12:34:28 EST 2008 x86_64 libc:glibc 2.7 NPTL 2.7 rlimit: STACK 10240k, CORE 0k, NPROC 61504, NOFILE 1024, AS infinity load average:2.83 2.73 2.78 CPU:total 2 (4 cores per cpu, 1 threads per core) family 6 model 23 stepping 10, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1 Memory: 4k page, physical 7872040k(14540k free), swap 0k(0k free) vm_info: Java HotSpot(TM) 64-Bit Server VM (14.0-b16) for linux-amd64 JRE (1.6.0_14-b08), built on May 21 2009 01:11:11 by "java_re" with gcc 3.2.2 (SuSE Lin ux) [error occurred during error reporting (printing date and time), id 0xb]

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• JNI 'problmatic frame' causes JVM to crash

  - by HJED

  Hi I'm using JNI to access the exiv2 library (written in C++) in Java and I'm getting a weird runtime error in the JNI code. I've tried using various -Xms and -Xmx options, but that seems to have no affect. I've also tried running this code on JDK1.7.0 with the same result. # A fatal error has been detected by the Java Runtime Environment: # # SIGSEGV (0xb) at pc=0x00007ff31807757f, pid=4041, tid=140682078746368 # # JRE version: 6.0_20-b20 # Java VM: OpenJDK 64-Bit Server VM (19.0-b09 mixed mode linux-amd64 ) # Derivative: IcedTea6 1.9.2 # Distribution: Ubuntu 10.10, package 6b20-1.9.2-0ubuntu2 # Problematic frame: # V [libjvm.so+0x42757f] # # If you would like to submit a bug report, please include # instructions how to reproduce the bug and visit: # https://bugs.launchpad.net/ubuntu/+source/openjdk-6/ # --------------- T H R E A D --------------- Current thread (0x000000000190d000): JavaThread "main" [_thread_in_Java, id=4043, stack(0x00007ff319447000,0x00007ff319548000)] siginfo:si_signo=SIGSEGV: si_errno=0, si_code=1 (SEGV_MAPERR), si_addr=0x0000000000000024 Registers: ... Register to memory mapping: RAX=0x0000000000000002 0x0000000000000002 is pointing to unknown location RBX=0x000000000190db90 0x000000000190db90 is pointing to unknown location RCX=0x0000000000000000 0x0000000000000000 is pointing to unknown location RDX=0x00007ff3195463f8 0x00007ff3195463f8 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE RSP=0x00007ff319546270 0x00007ff319546270 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE RBP=0x00007ff319546270 0x00007ff319546270 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE RSI=0x0000000000000024 0x0000000000000024 is pointing to unknown location RDI=0x00007ff3195463e0 0x00007ff3195463e0 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R8 =0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R9 =0x000000000190db88 0x000000000190db88 is pointing to unknown location R10=0x00007ff319546300 0x00007ff319546300 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R11=0x0000000000000002 0x0000000000000002 is pointing to unknown location R12=0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R13=0x00007ff319546560 0x00007ff319546560 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R14=0x00007ff3195463e0 0x00007ff3195463e0 is pointing into the stack for thread: 0x000000000190d000 "main" prio=10 tid=0x000000000190d000 nid=0xfcb runnable [0x0000000000000000] java.lang.Thread.State: RUNNABLE R15=0x0000000000000003 0x0000000000000003 is pointing to unknown location Top of Stack: (sp=0x00007ff319546270) ... Instructions: (pc=0x00007ff31807757f) 0x00007ff31807756f: e2 03 48 03 57 58 31 c9 48 8b 32 48 85 f6 74 03 0x00007ff31807757f: 48 8b 0e 48 89 0a 8b 77 68 83 c0 01 39 f0 7c d1 Stack: [0x00007ff319447000,0x00007ff319548000], sp=0x00007ff319546270, free space=1020k Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code) V [libjvm.so+0x42757f] V [libjvm.so+0x42866b] V [libjvm.so+0x4275c8] V [libjvm.so+0x4331bd] V [libjvm.so+0x44e5c7] C [libExiff2-binding.so+0x1f16] _ZN7JNIEnv_15CallVoidMethodAEP8_jobjectP10_jmethodIDPK6jvalue+0x40 C [libExiff2-binding.so+0x1b96] _Z8loadIPTCSt8auto_ptrIN5Exiv25ImageEEPKcP7JNIEnv_P8_jobject+0x2ba C [libExiff2-binding.so+0x1d3f] _Z7getVarsPKcP7JNIEnv_P8_jobject+0x176 C [libExiff2-binding.so+0x1de7] Java_photo_exiv2_Exiv2MetaDataStore_impl_1loadFromExiv+0x4b j photo.exiv2.Exiv2MetaDataStore.impl_loadFromExiv(Ljava/lang/String;Lphoto/exiv2/Exiv2MetaDataStore;)V+0 j photo.exiv2.Exiv2MetaDataStore.loadFromExiv2()V+9 j photo.exiv2.Exiv2MetaDataStore.loadData()V+1 j photo.exiv2.Exiv2MetaDataStore.<init>(Lphoto/ImageFile;)V+10 j test.Main.main([Ljava/lang/String;)V+76 v ~StubRoutines::call_stub V [libjvm.so+0x428698] V [libjvm.so+0x4275c8] V [libjvm.so+0x432943] V [libjvm.so+0x447f91] C [java+0x3495] JavaMain+0xd75 --------------- P R O C E S S --------------- Java Threads: ( => current thread ) 0x00007ff2c4027800 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=4060, stack(0x00007ff2c9052000,0x00007ff2c9153000)] 0x00007ff2c4025000 JavaThread "CompilerThread1" daemon [_thread_blocked, id=4059, stack(0x00007ff2c9153000,0x00007ff2c9254000)] 0x00007ff2c4022000 JavaThread "CompilerThread0" daemon [_thread_blocked, id=4058, stack(0x00007ff2c9254000,0x00007ff2c9355000)] 0x00007ff2c401f800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=4057, stack(0x00007ff2c9355000,0x00007ff2c9456000)] 0x00007ff2c4001000 JavaThread "Finalizer" daemon [_thread_blocked, id=4056, stack(0x00007ff2c994d000,0x00007ff2c9a4e000)] 0x0000000001984000 JavaThread "Reference Handler" daemon [_thread_blocked, id=4055, stack(0x00007ff2c9a4e000,0x00007ff2c9b4f000)] =>0x000000000190d000 JavaThread "main" [_thread_in_Java, id=4043, stack(0x00007ff319447000,0x00007ff319548000)] Other Threads: 0x000000000197d800 VMThread [stack: 0x00007ff2c9b4f000,0x00007ff2c9c50000] [id=4054] 0x00007ff2c4032000 WatcherThread [stack: 0x00007ff2c8f51000,0x00007ff2c9052000] [id=4061] VM state:not at safepoint (normal execution) VM Mutex/Monitor currently owned by a thread: None Heap PSYoungGen total 18432K, used 316K [0x00007ff2fed30000, 0x00007ff3001c0000, 0x00007ff313730000) eden space 15808K, 2% used [0x00007ff2fed30000,0x00007ff2fed7f0b8,0x00007ff2ffca0000) from space 2624K, 0% used [0x00007ff2fff30000,0x00007ff2fff30000,0x00007ff3001c0000) to space 2624K, 0% used [0x00007ff2ffca0000,0x00007ff2ffca0000,0x00007ff2fff30000) PSOldGen total 42240K, used 0K [0x00007ff2d5930000, 0x00007ff2d8270000, 0x00007ff2fed30000) object space 42240K, 0% used [0x00007ff2d5930000,0x00007ff2d5930000,0x00007ff2d8270000) PSPermGen total 21248K, used 2827K [0x00007ff2cb330000, 0x00007ff2cc7f0000, 0x00007ff2d5930000) object space 21248K, 13% used [0x00007ff2cb330000,0x00007ff2cb5f2f60,0x00007ff2cc7f0000) Dynamic libraries: 00400000-00409000 r-xp 00000000 08:03 141899 /usr/lib/jvm/java-6-openjdk/jre/bin/java 00608000-00609000 r--p 00008000 08:03 141899 /usr/lib/jvm/java-6-openjdk/jre/bin/java 00609000-0060a000 rw-p 00009000 08:03 141899 /usr/lib/jvm/java-6-openjdk/jre/bin/java 01904000-019ad000 rw-p 00000000 00:00 0 [heap] ... 7ff2c820c000-7ff2c8232000 r-xp 00000000 08:03 917704 /lib/libexpat.so.1.5.2 7ff2c8232000-7ff2c8432000 ---p 00026000 08:03 917704 /lib/libexpat.so.1.5.2 7ff2c8432000-7ff2c8434000 r--p 00026000 08:03 917704 /lib/libexpat.so.1.5.2 7ff2c8434000-7ff2c8435000 rw-p 00028000 08:03 917704 /lib/libexpat.so.1.5.2 7ff2c8435000-7ff2c844a000 r-xp 00000000 08:03 917708 /lib/libgcc_s.so.1 7ff2c844a000-7ff2c8649000 ---p 00015000 08:03 917708 /lib/libgcc_s.so.1 7ff2c8649000-7ff2c864a000 r--p 00014000 08:03 917708 /lib/libgcc_s.so.1 7ff2c864a000-7ff2c864b000 rw-p 00015000 08:03 917708 /lib/libgcc_s.so.1 7ff2c864b000-7ff2c8733000 r-xp 00000000 08:03 134995 /usr/lib/libstdc++.so.6.0.14 7ff2c8733000-7ff2c8932000 ---p 000e8000 08:03 134995 /usr/lib/libstdc++.so.6.0.14 7ff2c8932000-7ff2c893a000 r--p 000e7000 08:03 134995 /usr/lib/libstdc++.so.6.0.14 7ff2c893a000-7ff2c893c000 rw-p 000ef000 08:03 134995 /usr/lib/libstdc++.so.6.0.14 7ff2c893c000-7ff2c8951000 rw-p 00000000 00:00 0 7ff2c8951000-7ff2c8af3000 r-xp 00000000 08:03 134599 /usr/lib/libexiv2.so.6.0.0 7ff2c8af3000-7ff2c8cf2000 ---p 001a2000 08:03 134599 /usr/lib/libexiv2.so.6.0.0 7ff2c8cf2000-7ff2c8d0f000 r--p 001a1000 08:03 134599 /usr/lib/libexiv2.so.6.0.0 7ff2c8d0f000-7ff2c8d10000 rw-p 001be000 08:03 134599 /usr/lib/libexiv2.so.6.0.0 7ff2c8d10000-7ff2c8d23000 rw-p 00000000 00:00 0 7ff2c8d42000-7ff2c8d45000 r-xp 00000000 08:03 800718 /home/hjed/libExiff2-binding.so 7ff2c8d45000-7ff2c8f44000 ---p 00003000 08:03 800718 /home/hjed/libExiff2-binding.so 7ff2c8f44000-7ff2c8f45000 r--p 00002000 08:03 800718 /home/hjed/libExiff2-binding.so 7ff2c8f45000-7ff2c8f46000 rw-p 00003000 08:03 800718 /home/hjed/libExiff2-binding.so 7ff2c8f46000-7ff2c8f49000 r--s 0000f000 08:03 141333 /usr/lib/jvm/java-6-openjdk/jre/lib/ext/pulse-java.jar 7ff2c8f49000-7ff2c8f51000 r--s 00066000 08:03 408472 /usr/share/java/gnome-java-bridge.jar ... 7ff2ca559000-7ff2ca55b000 r--s 0001d000 08:03 141354 /usr/lib/jvm/java-6-openjdk/jre/lib/plugin.jar 7ff2ca55b000-7ff2ca560000 r--s 00044000 08:03 141353 /usr/lib/jvm/java-6-openjdk/jre/lib/netx.jar 7ff2ca560000-7ff2ca592000 rw-p 00000000 00:00 0 7ff2ca592000-7ff2ca720000 r--s 038af000 08:03 141833 /usr/lib/jvm/java-6-openjdk/jre/lib/rt.jar ... 7ff31673b000-7ff316742000 r-xp 00000000 08:03 141867 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libzip.so 7ff316742000-7ff316941000 ---p 00007000 08:03 141867 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libzip.so 7ff316941000-7ff316942000 r--p 00006000 08:03 141867 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libzip.so 7ff316942000-7ff316943000 rw-p 00007000 08:03 141867 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libzip.so 7ff316943000-7ff31694f000 r-xp 00000000 08:03 921396 /lib/libnss_files-2.12.1.so 7ff31694f000-7ff316b4e000 ---p 0000c000 08:03 921396 /lib/libnss_files-2.12.1.so 7ff316b4e000-7ff316b4f000 r--p 0000b000 08:03 921396 /lib/libnss_files-2.12.1.so 7ff316b4f000-7ff316b50000 rw-p 0000c000 08:03 921396 /lib/libnss_files-2.12.1.so 7ff316b50000-7ff316b5a000 r-xp 00000000 08:03 921398 /lib/libnss_nis-2.12.1.so 7ff316b5a000-7ff316d59000 ---p 0000a000 08:03 921398 /lib/libnss_nis-2.12.1.so 7ff316d59000-7ff316d5a000 r--p 00009000 08:03 921398 /lib/libnss_nis-2.12.1.so 7ff316d5a000-7ff316d5b000 rw-p 0000a000 08:03 921398 /lib/libnss_nis-2.12.1.so 7ff316d5b000-7ff316d63000 r-xp 00000000 08:03 921393 /lib/libnss_compat-2.12.1.so 7ff316d63000-7ff316f62000 ---p 00008000 08:03 921393 /lib/libnss_compat-2.12.1.so 7ff316f62000-7ff316f63000 r--p 00007000 08:03 921393 /lib/libnss_compat-2.12.1.so 7ff316f63000-7ff316f64000 rw-p 00008000 08:03 921393 /lib/libnss_compat-2.12.1.so 7ff316f64000-7ff316f6c000 r-xp 00000000 08:03 141869 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/native_threads/libhpi.so 7ff316f6c000-7ff31716b000 ---p 00008000 08:03 141869 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/native_threads/libhpi.so 7ff31716b000-7ff31716c000 r--p 00007000 08:03 141869 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/native_threads/libhpi.so 7ff31716c000-7ff31716d000 rw-p 00008000 08:03 141869 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/native_threads/libhpi.so 7ff31716d000-7ff317184000 r-xp 00000000 08:03 921392 /lib/libnsl-2.12.1.so 7ff317184000-7ff317383000 ---p 00017000 08:03 921392 /lib/libnsl-2.12.1.so 7ff317383000-7ff317384000 r--p 00016000 08:03 921392 /lib/libnsl-2.12.1.so 7ff317384000-7ff317385000 rw-p 00017000 08:03 921392 /lib/libnsl-2.12.1.so 7ff317385000-7ff317387000 rw-p 00000000 00:00 0 7ff317387000-7ff3173b2000 r-xp 00000000 08:03 141850 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libjava.so 7ff3173b2000-7ff3175b1000 ---p 0002b000 08:03 141850 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libjava.so 7ff3175b1000-7ff3175b2000 r--p 0002a000 08:03 141850 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libjava.so 7ff3175b2000-7ff3175b5000 rw-p 0002b000 08:03 141850 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libjava.so 7ff3175b5000-7ff3175c3000 r-xp 00000000 08:03 141866 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libverify.so 7ff3175c3000-7ff3177c2000 ---p 0000e000 08:03 141866 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libverify.so 7ff3177c2000-7ff3177c4000 r--p 0000d000 08:03 141866 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libverify.so 7ff3177c4000-7ff3177c5000 rw-p 0000f000 08:03 141866 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/libverify.so 7ff3177c5000-7ff3177cc000 r-xp 00000000 08:03 921405 /lib/librt-2.12.1.so 7ff3177cc000-7ff3179cb000 ---p 00007000 08:03 921405 /lib/librt-2.12.1.so 7ff3179cb000-7ff3179cc000 r--p 00006000 08:03 921405 /lib/librt-2.12.1.so 7ff3179cc000-7ff3179cd000 rw-p 00007000 08:03 921405 /lib/librt-2.12.1.so 7ff3179cd000-7ff317a4f000 r-xp 00000000 08:03 921390 /lib/libm-2.12.1.so 7ff317a4f000-7ff317c4e000 ---p 00082000 08:03 921390 /lib/libm-2.12.1.so 7ff317c4e000-7ff317c4f000 r--p 00081000 08:03 921390 /lib/libm-2.12.1.so 7ff317c4f000-7ff317c50000 rw-p 00082000 08:03 921390 /lib/libm-2.12.1.so 7ff317c50000-7ff3184c4000 r-xp 00000000 08:03 141871 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server/libjvm.so 7ff3184c4000-7ff3186c3000 ---p 00874000 08:03 141871 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server/libjvm.so 7ff3186c3000-7ff318739000 r--p 00873000 08:03 141871 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server/libjvm.so 7ff318739000-7ff318754000 rw-p 008e9000 08:03 141871 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server/libjvm.so 7ff318754000-7ff31878d000 rw-p 00000000 00:00 0 7ff31878d000-7ff318907000 r-xp 00000000 08:03 921385 /lib/libc-2.12.1.so 7ff318907000-7ff318b06000 ---p 0017a000 08:03 921385 /lib/libc-2.12.1.so 7ff318b06000-7ff318b0a000 r--p 00179000 08:03 921385 /lib/libc-2.12.1.so 7ff318b0a000-7ff318b0b000 rw-p 0017d000 08:03 921385 /lib/libc-2.12.1.so 7ff318b0b000-7ff318b10000 rw-p 00000000 00:00 0 7ff318b10000-7ff318b12000 r-xp 00000000 08:03 921388 /lib/libdl-2.12.1.so 7ff318b12000-7ff318d12000 ---p 00002000 08:03 921388 /lib/libdl-2.12.1.so 7ff318d12000-7ff318d13000 r--p 00002000 08:03 921388 /lib/libdl-2.12.1.so 7ff318d13000-7ff318d14000 rw-p 00003000 08:03 921388 /lib/libdl-2.12.1.so 7ff318d14000-7ff318d18000 r-xp 00000000 08:03 141838 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/jli/libjli.so 7ff318d18000-7ff318f17000 ---p 00004000 08:03 141838 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/jli/libjli.so 7ff318f17000-7ff318f18000 r--p 00003000 08:03 141838 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/jli/libjli.so 7ff318f18000-7ff318f19000 rw-p 00004000 08:03 141838 /usr/lib/jvm/java-6-openjdk/jre/lib/amd64/jli/libjli.so 7ff318f19000-7ff318f31000 r-xp 00000000 08:03 921401 /lib/libpthread-2.12.1.so 7ff318f31000-7ff319130000 ---p 00018000 08:03 921401 /lib/libpthread-2.12.1.so 7ff319130000-7ff319131000 r--p 00017000 08:03 921401 /lib/libpthread-2.12.1.so 7ff319131000-7ff319132000 rw-p 00018000 08:03 921401 /lib/libpthread-2.12.1.so 7ff319132000-7ff319136000 rw-p 00000000 00:00 0 7ff319136000-7ff31914c000 r-xp 00000000 08:03 917772 /lib/libz.so.1.2.3.4 7ff31914c000-7ff31934c000 ---p 00016000 08:03 917772 /lib/libz.so.1.2.3.4 7ff31934c000-7ff31934d000 r--p 00016000 08:03 917772 /lib/libz.so.1.2.3.4 7ff31934d000-7ff31934e000 rw-p 00017000 08:03 917772 /lib/libz.so.1.2.3.4 7ff31934e000-7ff31936e000 r-xp 00000000 08:03 921379 /lib/ld-2.12.1.so 7ff319387000-7ff319391000 rw-p 00000000 00:00 0 7ff319391000-7ff319447000 rw-p 00000000 00:00 0 7ff319447000-7ff31944a000 ---p 00000000 00:00 0 7ff31944a000-7ff31954d000 rw-p 00000000 00:00 0 7ff319562000-7ff31956a000 rw-s 00000000 08:03 1966453 /tmp/hsperfdata_hjed/4041 7ff31956a000-7ff31956b000 rw-p 00000000 00:00 0 7ff31956b000-7ff31956c000 r--p 00000000 00:00 0 7ff31956c000-7ff31956e000 rw-p 00000000 00:00 0 7ff31956e000-7ff31956f000 r--p 00020000 08:03 921379 /lib/ld-2.12.1.so 7ff31956f000-7ff319570000 rw-p 00021000 08:03 921379 /lib/ld-2.12.1.so 7ff319570000-7ff319571000 rw-p 00000000 00:00 0 7fff0fb03000-7fff0fb24000 rw-p 00000000 00:00 0 [stack] 7fff0fbff000-7fff0fc00000 r-xp 00000000 00:00 0 [vdso] ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vsyscall] VM Arguments: jvm_args: -Dfile.encoding=UTF-8 java_command: test.Main Launcher Type: SUN_STANDARD Environment Variables: PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games USERNAME=hjed LD_LIBRARY_PATH=/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server:/usr/lib/jvm/java-6-openjdk/jre/lib/amd64:/usr/lib/jvm/java-6-openjdk/jre/../lib/amd64 SHELL=/bin/bash DISPLAY=:0.0 Signal Handlers: SIGSEGV: [libjvm.so+0x712700], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGBUS: [libjvm.so+0x712700], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGFPE: [libjvm.so+0x5d4020], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGPIPE: [libjvm.so+0x5d4020], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGXFSZ: [libjvm.so+0x5d4020], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGILL: [libjvm.so+0x5d4020], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, sa_flags=0x00000000 SIGUSR2: [libjvm.so+0x5d3730], sa_mask[0]=0x00000004, sa_flags=0x10000004 SIGHUP: [libjvm.so+0x5d61a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGINT: SIG_IGN, sa_mask[0]=0x00000000, sa_flags=0x00000000 SIGTERM: [libjvm.so+0x5d61a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 SIGQUIT: [libjvm.so+0x5d61a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004 --------------- S Y S T E M --------------- OS:Ubuntu 10.10 (maverick) uname:Linux 2.6.35-24-generic #42-Ubuntu SMP Thu Dec 2 02:41:37 UTC 2010 x86_64 libc:glibc 2.12.1 NPTL 2.12.1 rlimit: STACK 8192k, CORE 0k, NPROC infinity, NOFILE 1024, AS infinity load average:0.25 0.16 0.21 /proc/meminfo: MemTotal: 4048200 kB MemFree: 1230476 kB Buffers: 589572 kB Cached: 911132 kB SwapCached: 0 kB Active: 1321712 kB Inactive: 1202272 kB Active(anon): 1023852 kB Inactive(anon): 7168 kB Active(file): 297860 kB Inactive(file): 1195104 kB Unevictable: 64 kB Mlocked: 64 kB SwapTotal: 7065596 kB SwapFree: 7065596 kB Dirty: 632 kB Writeback: 0 kB AnonPages: 1023368 kB Mapped: 145832 kB Shmem: 7728 kB Slab: 111136 kB SReclaimable: 66316 kB SUnreclaim: 44820 kB KernelStack: 3824 kB PageTables: 27736 kB NFS_Unstable: 0 kB Bounce: 0 kB WritebackTmp: 0 kB CommitLimit: 9089696 kB Committed_AS: 2378396 kB VmallocTotal: 34359738367 kB VmallocUsed: 332928 kB VmallocChunk: 34359397884 kB HardwareCorrupted: 0 kB HugePages_Total: 0 HugePages_Free: 0 HugePages_Rsvd: 0 HugePages_Surp: 0 Hugepagesize: 2048 kB DirectMap4k: 67136 kB DirectMap2M: 4118528 kB CPU:total 8 (4 cores per cpu, 2 threads per core) family 6 model 26 stepping 5, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3, sse4.1, sse4.2, popcnt, ht Memory: 4k page, physical 4048200k(1230476k free), swap 7065596k(7065596k free) vm_info: OpenJDK 64-Bit Server VM (19.0-b09) for linux-amd64 JRE (1.6.0_20-b20), built on Dec 10 2010 19:45:55 by "buildd" with gcc 4.4.5 time: Sat Jan 1 14:12:27 2011 elapsed time: 0 seconds The java code is: ... public class Main { public static void main(String[] args) { ... ImageFile img = new ImageFile(System.getProperty("user.home") + "/PC100001.JPG"); Exiv2MetaDataStore e = new Exiv2MetaDataStore(img); Iterator<Entry<String, String>> i = e.entrySet().iterator(); while (i.hasNext()) { Entry<String, String> entry = i.next(); System.out.println(entry.getKey() + ":" + entry.getValue()); } //if you switch this print statment with the while loop you get the same error. // System.out.print(e.toString()); } } and /** NB: MetaDataStore is an abstract class that extends HashMap<String,String> */ public class Exiv2MetaDataStore extends MetaDataStore{ ... private final ImageFile F; /** * Creates an meta data store from an ImageFile using Exiv2 * this calls loadData(); * @param f */ public Exiv2MetaDataStore(ImageFile f) { F = f; loadData(); } ... @Override protected void loadData() { loadFromExiv2(); } ... private void loadFromExiv2() { impl_loadFromExiv(F.getAbsolutePath(), this); } private native void impl_loadFromExiv(String path, Exiv2MetaDataStore str); //this method called by the C++ code public void exiv2_reciveElement(String key, String value) { super.put(key,value); } static { Runtime.getRuntime().load("/home/hjed/libExiff2-binding.so"); } } C++ code: #include <exif.hpp> #include <image.hpp> #include <iptc.hpp> #include <exiv2/exiv2.hpp> #include <exiv2/error.hpp> #include <iostream> #include <iomanip> #include <cassert> void loadIPTC(Exiv2::Image::AutoPtr image, const char * path, JNIEnv * env, jobject obj) { Exiv2::IptcData &iptcData = image->iptcData(); //load method jclass cls = env->GetObjectClass(obj); jmethodID mid = env->GetMethodID(cls, "exiv2_reciveElement", "(Ljava/lang/String;Ljava/lang/String;)V"); //is there any IPTC data AND check that method exists if (iptcData.empty() | (mid == NULL)) { std::string error(path); error += ": failed loading IPTC data, there may not be any data"; } else { Exiv2::IptcData::iterator end = iptcData.end(); for (Exiv2::IptcData::iterator md = iptcData.begin(); md != end; ++md) { jvalue values[2]; const char* key = md->key().c_str(); values[0].l = env->NewStringUTF(key); md->value().toString().c_str(); const char* value = md->typeName(); values[2].l = env->NewStringUTF(value); //If I replace the code for values[2] with the commented out code I get the same error. //const char* type = md->typeName(); //values[2].l = env->NewStringUTF(type); env->CallVoidMethodA(obj, mid, values); } } } void getVars(const char* path, JNIEnv * env, jobject obj) { //Load image Exiv2::Image::AutoPtr image = Exiv2::ImageFactory::open(path); assert(image.get() != 0); image->readMetadata(); //Load IPTC data loadIPTC(image, path, env, obj); } JNIEXPORT void JNICALL Java_photo_exiv2_Exiv2MetaDataStore_impl_1loadFromExiv(JNIEnv * env, jobject obj, jstring path, jobject obj2) { const char* path2 = env->GetStringUTFChars(path, NULL); getVars(path2, env, obj); env->ReleaseStringUTFChars(path, path2); } I've searched for a fix for this, but I can't find one. I don't have much experience using C++ so if I've made an obvious mistake in the C code I apologies. Thanks for any help, HJED P.S. This is my first post on this site and I wasn't sure how much of the code I needed to show. Sorry if I've put to much up.

  Read the article

• The JRockit Performance Counters

  - by Marcus Hirt

  Every now and then I get a question regarding what the attributes in the PerfCounters dynamic MBean represent. Now, all the MBeans under the oracle.jrockit.management (bea.jrockit.management pre R28) domain are part of what we call JMXMAPI (the JRockit JMX based Management API), which is unsupported. Therefore there is no official documentation for the API. I did however write a bit about JMXMAPI in my recent JRockit book, Oracle JRockit: The Definitive Guide. The information in the table below is from that book: Counter Description java.cls.loadedClasses The number of classes loaded since the start of the JVM. java.cls.unloadedClasses The number of classes unloaded since the start of the JVM. java.property.java.class.path The class path of the JVM. java.property.java.endorsed.dirs The endorsed dirs. See the Endorsed Standards Override Mechanism. java.property.java.ext.dirs The ext dirs, which are searched for jars that should be automatically put on the classpath. See the Java documentation for java.ext.dirs. java.property.java.home The root of the JDK or JRE installation. java.property.java.library.path The library path used to find user libraries. java.property.java.vm.version The JRockit version. java.rt.vmArgs The list of VM arguments. java.threads.daemon The number of running daemon threads. java.threads.live The total number of running threads. java.threads.livePeak The peak number of threads that has been running since JRockit was started. java.threads.nonDaemon The number of non-daemon threads running. java.threads.started The total number of threads started since the start of JRockit. jrockit.gc.latest.heapSize The current heap size in bytes. jrockit.gc.latest.nurserySize The current nursery size in bytes. jrockit.gc.latest.oc.compaction.time How long, in ticks, the last compaction lasted. Reset to 0 if compaction is skipped. jrockit.gc.latest.oc.heapUsedAfter Used heap at the end of the last OC, in bytes. jrockit.gc.latest.oc.heapUsedBefore Used heap at the start of the last OC, in bytes. jrockit.gc.latest.oc.number The number of OCs that have occurred so far. jrockit.gc.latest.oc.sumOfPauses The paused time for the last OC, in ticks. jrockit.gc.latest.oc.time The time the last OC took, in ticks. jrockit.gc.latest.yc.sumOfPauses The paused time for the last YC, in ticks. jrockit.gc.latest.yc.time The time the last YC took, in ticks. jrockit.gc.max.oc.individualPause The longest OC pause so far, in ticks. jrockit.gc.max.yc.individualPause The longest YC pause so far, in ticks. jrockit.gc.total.oc.compaction.externalAborted Number of aborted external compactions so far. jrockit.gc.total.oc.compaction.internalAborted Number of aborted internal compactions so far. jrockit.gc.total.oc.compaction.internalSkipped Number of skipped internal compactions so far. jrockit.gc.total.oc.compaction.time The total time spent doing compaction so far, in ticks. jrockit.gc.total.oc.ompaction.externalSkipped Number of skipped external compactions so far. jrockit.gc.total.oc.pauseTime The sum of all OC pause times so far, in ticks. jrockit.gc.total.oc.time The total time spent doing OC so far, in ticks. jrockit.gc.total.pageFaults The number of page faults that have occurred during GC so far. jrockit.gc.total.yc.pauseTime The sum of all YC pause times, in ticks. jrockit.gc.total.yc.promotedObjects The number of objects that all YCs have promoted. jrockit.gc.total.yc.promotedSize The total number of bytes that all YCs have promoted, in bytes. jrockit.gc.total.yc.time The total time spent doing YC, in ticks. oracle.ci.jit.count The number of methods JIT compiled. oracle.ci.jit.timeTotal The total time spent JIT compiling, in ticks. oracle.ci.opt.count The number of methods optimized. oracle.ci.opt.timeTotal The total time spent optimizing, in ticks. oracle.rt.counterFrequency Used to convert ticks values to seconds. Note that many of these counters are excellent choices for attributes to plot in the Management Console. Also note that many values are in ticks – to convert them to seconds, divide by the value in the oracle.rt.counterFrequency counter.

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• How can I work efficiently on a desktop sharing workflow?

  - by OSdave

  I am a freelance Magento developer, based in Spain. One of my clients is a Germany based web development company and they're asking me something I think it's impossible. OK, maybe not impossible but definitely not a preferred way of doing things. One of their clients has a Magento Entreprise installation, which is the paid (and I think proprietary) version of Magento. Their client has forbidden them to download the files from his server. My client is asking me now to study one particular module of the application in order to interact with it from a custom module I'll have to develop. As they have a read-only ssh access to their client's server, they came up with this solution: Set up a desktop/screen sharing session between one of their developer's station and mine, alongsides with a skype conversation. Their idea is that I'll say to the developer: show me file foo.php The developer will then open this foo.php file in his IDE. I'll have then to ask him to show me the bar method, the parent class, etc... Remember that it's a read-only session, so forget about putting a Zend_Debug::log() anywhere, and don't even think about a xDebug breakpoint (they don't use any kind of debugger, sic). Their client has also forbidden them to use any version control system... My first reaction when they explained to me this was (and I actually did say it outloud to them): Well, find another client. but they took it as a joke from me. I understand that in a business point of view rejecting a client is not a good practice, but I think that the condition of this assignment make it impossible to complete. At least according to my workflow. I mean, the way I work or learn a new framework/program is: download all files and copy of db on my pc create a git repository and a branch run the application locally use breakpoints use Zend_Debug::log() write the code and tests commit to git repo upload to (test/staging first if there is one, production if not) server I have agreed to try the desktop sharing session, although I think it will be a waste of time. On one hand I don't mind, they pay me for that time, but I know me and I don't like the sensation of loosing my time. On the other hand, I have other clients for whom I can work according to my workflow. I am about to say to them that I cannot (don't want to) do it. Well, I'll first try this desktop sharing session: maybe I'm wrong and it can actually work. But I like to consider myself as a professional, and I know that I don't know everything. So I try to keep an open mind and I am always willing to learn new stuff. So my questions are: Can this desktop-sharing workflow work? What should be done in order to take the most of it? Taking into account all the obstacles (geographic locations, no local, no git), is there another way for me to work on that project?

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• Different fan behaviour in my laptop after upgrade, what to do now?

  - by student

  After upgrading from lubuntu 13.10 to 14.04 the fan of my laptop seems to run much more often than in 13.10. When it runs, it doesn't run continously but starts and stops every second. fwts fan results in Results generated by fwts: Version V14.03.01 (2014-03-27 02:14:17). Some of this work - Copyright (c) 1999 - 2014, Intel Corp. All rights reserved. Some of this work - Copyright (c) 2010 - 2014, Canonical. This test run on 12/05/14 at 21:40:13 on host Linux einstein 3.13.0-24-generic #47-Ubuntu SMP Fri May 2 23:30:00 UTC 2014 x86_64. Command: "fwts fan". Running tests: fan. fan: Simple fan tests. -------------------------------------------------------------------------------- Test 1 of 2: Test fan status. Test how many fans there are in the system. Check for the current status of the fan(s). PASSED: Test 1, Fan cooling_device0 of type Processor has max cooling state 10 and current cooling state 0. PASSED: Test 1, Fan cooling_device1 of type Processor has max cooling state 10 and current cooling state 0. PASSED: Test 1, Fan cooling_device2 of type LCD has max cooling state 15 and current cooling state 10. Test 2 of 2: Load system, check CPU fan status. Test how many fans there are in the system. Check for the current status of the fan(s). Loading CPUs for 20 seconds to try and get fan speeds to change. Fan cooling_device0 current state did not change from value 0 while CPUs were busy. Fan cooling_device1 current state did not change from value 0 while CPUs were busy. ADVICE: Did not detect any change in the CPU related thermal cooling device states. It could be that the devices are returning static information back to the driver and/or the fan speed is automatically being controlled by firmware using System Management Mode in which case the kernel interfaces being examined may not work anyway. ================================================================================ 3 passed, 0 failed, 0 warning, 0 aborted, 0 skipped, 0 info only. ================================================================================ 3 passed, 0 failed, 0 warning, 0 aborted, 0 skipped, 0 info only. Test Failure Summary ================================================================================ Critical failures: NONE High failures: NONE Medium failures: NONE Low failures: NONE Other failures: NONE Test |Pass |Fail |Abort|Warn |Skip |Info | ---------------+-----+-----+-----+-----+-----+-----+ fan | 3| | | | | | ---------------+-----+-----+-----+-----+-----+-----+ Total: | 3| 0| 0| 0| 0| 0| ---------------+-----+-----+-----+-----+-----+-----+ Here is the output of lsmod lsmod Module Size Used by i8k 14421 0 zram 18478 2 dm_crypt 23177 0 gpio_ich 13476 0 dell_wmi 12761 0 sparse_keymap 13948 1 dell_wmi snd_hda_codec_hdmi 46207 1 snd_hda_codec_idt 54645 1 rfcomm 69160 0 arc4 12608 2 dell_laptop 18168 0 bnep 19624 2 dcdbas 14928 1 dell_laptop bluetooth 395423 10 bnep,rfcomm iwldvm 232285 0 mac80211 626511 1 iwldvm snd_hda_intel 52355 3 snd_hda_codec 192906 3 snd_hda_codec_hdmi,snd_hda_codec_idt,snd_hda_intel snd_hwdep 13602 1 snd_hda_codec snd_pcm 102099 3 snd_hda_codec_hdmi,snd_hda_codec,snd_hda_intel snd_page_alloc 18710 2 snd_pcm,snd_hda_intel snd_seq_midi 13324 0 snd_seq_midi_event 14899 1 snd_seq_midi snd_rawmidi 30144 1 snd_seq_midi coretemp 13435 0 kvm_intel 143060 0 kvm 451511 1 kvm_intel snd_seq 61560 2 snd_seq_midi_event,snd_seq_midi joydev 17381 0 serio_raw 13462 0 iwlwifi 169932 1 iwldvm pcmcia 62299 0 snd_seq_device 14497 3 snd_seq,snd_rawmidi,snd_seq_midi snd_timer 29482 2 snd_pcm,snd_seq lpc_ich 21080 0 cfg80211 484040 3 iwlwifi,mac80211,iwldvm yenta_socket 41027 0 pcmcia_rsrc 18407 1 yenta_socket pcmcia_core 23592 3 pcmcia,pcmcia_rsrc,yenta_socket binfmt_misc 17468 1 snd 69238 17 snd_hwdep,snd_timer,snd_hda_codec_hdmi,snd_hda_codec_idt,snd_pcm,snd_seq,snd_rawmidi,snd_hda_codec,snd_hda_intel,snd_seq_device,snd_seq_midi soundcore 12680 1 snd parport_pc 32701 0 mac_hid 13205 0 ppdev 17671 0 lp 17759 0 parport 42348 3 lp,ppdev,parport_pc firewire_ohci 40409 0 psmouse 102222 0 sdhci_pci 23172 0 sdhci 43015 1 sdhci_pci firewire_core 68769 1 firewire_ohci crc_itu_t 12707 1 firewire_core ahci 25819 2 libahci 32168 1 ahci i915 783485 2 wmi 19177 1 dell_wmi i2c_algo_bit 13413 1 i915 drm_kms_helper 52758 1 i915 e1000e 254433 0 drm 302817 3 i915,drm_kms_helper ptp 18933 1 e1000e pps_core 19382 1 ptp video 19476 1 i915 I tried one answer to the similar question: loud fan on Ubuntu 14.04 and created a /etc/i8kmon.conf like the following: # Run as daemon, override with --daemon option set config(daemon) 1 # Automatic fan control, override with --auto option set config(auto) 1 # Status check timeout (seconds), override with --timeout option set config(timeout) 2 # Report status on stdout, override with --verbose option set config(verbose) 1 # Temperature thresholds: {fan_speeds low_ac high_ac low_batt high_batt} set config(0) {{0 0} -1 55 -1 55} set config(1) {{0 1} 50 60 55 65} set config(2) {{1 1} 55 80 60 85} set config(3) {{2 2} 70 128 75 128} With this setup the fan goes on even if the temperature is below 50 degree celsius (I don't see a pattern). However I get the impression that the CPU got's hotter in average than without this file. What changes from 13.10 to 14.04 may be responsible for this? If this is a bug, for which package I should report the bug?

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• How do I install LFE on Ubuntu Karmic?

  - by karlthorwald

  Erlang was already installed: $dpkg -l|grep erlang ii erlang 1:13.b.3-dfsg-2ubuntu2 Concurrent, real-time, distributed function ii erlang-appmon 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP application monitor ii erlang-asn1 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP modules for ASN.1 support ii erlang-base 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP virtual machine and base applica ii erlang-common-test 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP application for automated testin ii erlang-debugger 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP application for debugging and te ii erlang-dev 1:13.b.3-dfsg-2ubuntu2 Erlang/OTP development libraries and header [... many more] Erlang seems to work: $ erl Erlang R13B03 (erts-5.7.4) [source] [64-bit] [smp:2:2] [rq:2] [async-threads:0] [hipe] [kernel-poll:false] Eshell V5.7.4 (abort with ^G) 1> I downloaded lfe from github and checked out 0.5.2: git clone http://github.com/rvirding/lfe.git cd lfe git checkout -b local0.5.2 e207eb2cad $ configure configure: command not found $ make mkdir -p ebin erlc -I include -o ebin -W0 -Ddebug +debug_info src/*.erl #erl -I -pa ebin -noshell -eval -noshell -run edoc file src/leex.erl -run init stop #erl -I -pa ebin -noshell -eval -noshell -run edoc_run application "'Leex'" '"."' '[no_packages]' #mv src/*.html doc/ Must be something stupid i missed :o $ sudo make install make: *** No rule to make target `install'. Stop. $ erl -noshell -noinput -s lfe_boot start {"init terminating in do_boot",{undef,[{lfe_boot,start,[]},{init,start_it,1},{init,start_em,1}]}} Crash dump was written to: erl_crash.dump init terminating in do_boot () Is there an example how I would create a hello world source file and compile and run it?

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• Problem building STLport NDK r5/ Android

  - by user558299

  Hi all, I'm trying to build STLport for Android. I got the following steps, but they are not working: 1 - Clone STLport repository using: git clone git://stlport.git.sourceforge.net/gitroot/stlport/stlport 2 - Configure environment using : ./configure --target=arm-eabi --with-extra-cxxflags="-fshort-enums" --with-extra-cflags="-fshort-enums" 3 - From src directory build it using make SYSROOT"{MY NDK path}/platforms/android-5/arch-arm/" release-static But I got the following errors: In file included from ../stlport/stl/_alloc.h:45, from ../stlport/memory:29, from dll_main.cpp:41: ../stlport/stl/_new.h:45:24: error: new: No such file or directory In file included from ../stlport/stl/_limits.h:36, from ../stlport/limits:29, from dll_main.cpp:48: ../stlport/stl/_cwchar.h:26:30: error: cstddef: No such file or directory In file included from ../stlport/stl/_utility.h:35, from ../stlport/utility:35, from dll_main.cpp:40: ../stlport/type_traits:889: error: 'declval' was not declared in this scope ../stlport/type_traits:889: error: expected primary-expression before '>' token ../stlport/type_traits:889: error: expected primary-expression before ')' token ../stlport/type_traits:889: error: 'declval' was not declared in this scope ../stlport/type_traits:889: error: expected primary-expression before '>' token ../stlport/type_traits:889: error: expected primary-expression before ')' token ../stlport/type_traits:889: error: ISO C++ forbids declaration of 'decltype' with no type ../stlport/type_traits:889: error: ISO C++ forbids in-class initialization of non-const static member 'decltype' ../stlport/type_traits:889: error: template declaration of 'int std::tr1::detail::decltype' ../stlport/type_traits:942: error: ISO C++ forbids declaration of 'decltype' with no type ../stlport/type_traits:942: error: ISO C++ forbids in-class initialization of non-const static member 'decltype' ../stlport/type_traits:942: error: template declaration of 'int std::tr1::detail::decltype' make: *** [obj/arm-eabi-gcc/so/dll_main.o] Error 1 Is there any include dir or configuration I´m missing? Thanks, Sergio

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• Unknown user 'app' with capistrano

  - by trobrock

  This is my first time trying to set up capistrano to deploy a rails application. I am deploying from my local machine to my remote server that has the repo, web, app, and mysql servers all on the same machine. I am following this walk through: http://www.capify.org/index.php/From_The_Beginning I get to the command cap deploy:start Then I get this error: *** [err :: example.com] sudo: unknown user: app command finished failed: "sh -c 'cd /var/www/example/current && sudo -p '\\''sudo password: '\\'' -u app nohup script/spin'" on example.com Am I supposed to add an 'app' user, or is there a way of changing what user the command runs as? This is my deploy.rb: set :application, "example" set :repository, "[email protected]:example.git" set :user, "trobrock" set :branch, 'master' set :deploy_to, "/var/www/example" set :scm, :git # Or: `accurev`, `bzr`, `cvs`, `darcs`, `git`, `mercurial`, `perforce`, `subversion` or `none` role :web, "example.com" # Your HTTP server, Apache/etc role :app, "example.com" # This may be the same as your `Web` server role :db, "example.com", :primary => true # This is where Rails migrations will run And obviously everywhere it says example.com is my servers hostname and every it just says example is the app name.

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• How to Make a DVCS Completely Interoperable with Subversion?

  - by David M

  What architectural changes would a DVCS need to be completely interoperable with Subversion? Many DVCSs have some kind of bidirectional interface with Subversion, but there are limitations and caveats. For instance, git-svn can create a repository that mirrors Subversion, and changes to that repo can be sent back to Subversion via 'dcommit'. But the git-svn manpage explicitly cautions against making clones of that repository, so essentially, it's a Subversion working copy that you can use git commands on. Bazaar has a bidirectional Subversion capability too, but its documentation notes that Subversion properties aren't supported at all. Here's the end that I'm pursuing. I want a Subversion repository and a DVCS repository that, in the steady state, have identical content. When something is changed on one, it's automatically mirrored to the other. Subversion users interact with the Subversion repository normally. DVCS users clone the DVCS repository, pull changes from it, and push changes back to it. Most importantly, they don't need to know that this special DVCS repository is associated with a Subversion repository. It would probably be nifty if any clone of the special repository is itself a special repository and could commit directly to Subversion, but it might be sufficient if only the special repository directly interacts with Subversion. I think that's what mostly needed is to improve the bidirectional capability so that changes to Subversion properties are translated to changes in the DVCS repository. Some changes in the DVCS repository would be translated to changes to Subversion properties. Or is the answer to create a new capability in Subversion that interacts with a DVCS repository, using the DVCS repository as just a special storage layer such as fsfs or bdb? If there's not a direct mapping between the things that Subversion and a DVCS regard as having versions, does that imply that there's always going to be some activity that cannot be recorded properly on one or the other?

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• Problems compiling libjingle/gtk+-2.0 for Mac OS X

  - by mindthief

  Hi All, I'm trying to compile libjingle on Mac OSX Snow Leopard. The INSTALL file said to './configure', 'make' and 'make install', as usual. But make fails for me. Initially it gave some messages indicating that I didn't have pkg-config installed (I guess OSX doesn't come with it installed?), so I downloaded pkg-config from http://pkgconfig.freedesktop.org/releases/ Now I get this message: Package gtk+-2.0 was not found in the pkg-config search path. Perhaps you should add the directory containing `gtk+-2.0.pc' to the PKG_CONFIG_PATH environment variable No package 'gtk+-2.0' found I tried to install gtk by using the script at SourceForge: http://sourceforge.net/projects/gtk-osx/ (this is the website pointed to by the gtk website) Running the script didn't really seem to do anything, here is the output: $./gtk-osx-build-setup.sh Checking out jhbuild (2.27.3) from git... From git://git.gnome.org/jhbuild * tag 2.27.3 -> FETCH_HEAD Installing jhbuild... Installing jhbuild configuration... Installing gtk-osx moduleset files... Done. $ And I still get that error message about "Package gtk+-2.0 not found" while make-ing libjingle. Help will be appreciated, thanks!

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• Starting a process synchronously, and "streaming" the output

  - by Benjol

  I'm looking at trying to start a process from F#, wait till it's finished, but also read it's output progressively. Is this the right/best way to do it? (In my case I'm trying to execute git commands, but that is tangential to the question) let gitexecute (logger:string->unit) cmd = let procStartInfo = new ProcessStartInfo(@"C:\Program Files\Git\bin\git.exe", cmd) // Redirect to the Process.StandardOutput StreamReader. procStartInfo.RedirectStandardOutput <- true procStartInfo.UseShellExecute <- false; // Do not create the black window. procStartInfo.CreateNoWindow <- true; // Create a process, assign its ProcessStartInfo and start it let proc = new Process(); proc.StartInfo <- procStartInfo; proc.Start() |> ignore // Get the output into a string while not proc.StandardOutput.EndOfStream do proc.StandardOutput.ReadLine() |> logger What I don't understand is how the proc.Start() can return a boolean and also be asynchronous enough for me to get the output out of the while progressively. Unfortunately, I don't currently have a large enough repository - or slow enough machine, to be able to tell what order things are happening in...

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• rc.local on ubuntu on ec2 will not work

  - by Tampa

  Below are the contents of my rc.local file. When I run sudo /etc/rc.local it works fine. When I boot up and instance. I expect monit to be installed but it is not. I am at a total loss. I usually use rc.local but this is rather confunsing. #!/bin/sh -e # # rc.local # # This script is executed at the end of each multiuser runlevel. # Make sure that the script will "exit 0" on success or any other # value on error. # # In order to enable or disable this script just change the execution # bits. # # By default this script does nothing. apt-get -y install monit /etc/init.d/monit stop cd /home/ubuntu/workspace/rtbopsConfig/ git fetch git checkout origin/master rtb_ec2_boot/ec2_boot.py git checkout origin/master config/ cp /home/ubuntu/workspace/rtbopsConfig/config/monit/redis/monitrc /etc/monit/ /usr/bin/python /home/ubuntu/workspace/rtbopsConfig/rtb_ec2_boot/ec2_boot.py >> /home/ubuntu/workspace/ec2_boot.txt 2>&1 /etc/init.d/monit start chkconfig monit on exit 0

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• Ruby on Rails sortable list

  - by mdgrech

  I created a sortable list in my RoR project, unfortunately it's not saving the list position. Upon page refresh the items return to their normal spot. I've pasted the code below or you can git it: git://github.com/mdgrech/23notes-.git app/views/notes/index.html.erb ///////////////////////////////////////////////////////////////////////////////////////////// <div id="newNoteDiv"></div> <ul id="notesList"> <% for note in @notes %> <li id="<%=h note.position %>"> <span class="handle">[drag]</span> <div id="listContent"> <h3><%= link_to note.title, edit_note_path(note) %></h3> <p><%=h note.content %></p> <%= link_to "Destroy", note, :confirm => 'Are you sure?', :method => :delete %> </div> </li> <% end %> </ul> <%= sortable_element("notesList", :url => sort_notes_path, :handle => "handle" ) %> app/controllers/notes_controller.rb ////////////////////////////////////////////////////////////////////////////////////////// def index @notes = Note.all(:order => "position") end def sort params[:notes].each_with_index do |id, index| Note.update_all(['position=?', index+1], ['id=?', id]) end render :nothing => true end config/routes.rb ////////////////////////////////////////////////////////////////////////////////////////// map.resources :notes, :collection => { :sort => :post } map.root :notes app/models/note.rb ////////////////////////////////////////////////////////////////////////////////////////// class Note < ActiveRecord::Base acts_as_list end

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• Weird vps server issue

  - by anon-user0

  I have an unmanaged linux vps Ubuntu 11.10 (Oneiric Ocelot). I have LNMP installed. Also php-fpm php-apc, varnish, memcache. I have (or rather had) several live sites on it. under normal load the server uses ~700 mb memory. But since last night its using only 20mb~ memory and a lot of the services seems to be down (according to htop) I only see nginx working and mysql starts up and goes does every few minutes on a loop. Here are some information on the server that might help you help me: root@server:~# uname -a Linux server 2.6.18-308.el5.028stab099.3 #1 SMP Wed Mar 7 15:56:00 MSK 2012 i686 i686 i386 GNU/Linux - root@server:~# ifconfig -a lo Link encap:Local Loopback LOOPBACK MTU:16436 Metric:1 RX packets:0 errors:0 dropped:0 overruns:0 frame:0 TX packets:0 errors:0 dropped:0 overruns:0 carrier:0 collisions:0 txqueuelen:0 RX bytes:0 (0.0 B) TX bytes:0 (0.0 B) venet0 Link encap:UNSPEC HWaddr 00-00-00-00-00-00-00-00-00-00-00-00-00-00-00-00 inet addr:127.0.0.2 P-t-P:127.0.0.2 Bcast:0.0.0.0 Mask:255.255.255.255 UP BROADCAST POINTOPOINT RUNNING NOARP MTU:1500 Metric:1 RX packets:12515 errors:0 dropped:0 overruns:0 frame:0 TX packets:9541 errors:0 dropped:1 overruns:0 carrier:0 collisions:0 txqueuelen:0 RX bytes:7191214 (7.1 MB) TX bytes:536726 (536.7 KB) venet0:0 Link encap:UNSPEC HWaddr 00-00-00-00-00-00-00-00-00-00-00-00-00-00-00-00 inet addr:176.31.158.78 P-t-P:176.31.158.78 Bcast:0.0.0.0 Mask:255.255.255.255 UP BROADCAST POINTOPOINT RUNNING NOARP MTU:1500 Metric:1 - root@server:~# netstat -l Active Internet connections (only servers) Proto Recv-Q Send-Q Local Address Foreign Address State tcp 0 0 *:http-alt *:* LISTEN tcp 0 0 *:ssh *:* LISTEN tcp6 0 0 [::]:http-alt [::]:* LISTEN tcp6 0 0 [::]:ssh [::]:* LISTEN Active UNIX domain sockets (only servers) Proto RefCnt Flags Type State I-Node Path unix 2 [ ACC ] STREAM LISTENING 9307368 @/com/ubuntu/upstart - htop: http://i.stack.imgur.com/NHKYX.png EDIT: Stressed. mind was not working adding log: root@server:~# less /var/log/syslog Jun 27 05:27:42 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 05:39:01 server CRON[9298]: (root) CMD ([ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) -delete) Jun 27 05:40:01 server CRON[9463]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 05:46:21 server sm-msp-queue[9480]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=00:19:14, xdelay=00:06:18, mailer=relay, pri=122407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 05:52:39 server sm-msp-queue[9480]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=03:06:32, xdelay=00:06:18, mailer=relay, pri=842407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:00:01 server CRON[15671]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 06:06:22 server sm-msp-queue[15690]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=00:39:15, xdelay=00:06:18, mailer=relay, pri=212407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:09:01 server CRON[18114]: (root) CMD ([ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) -delete) Jun 27 06:12:40 server sm-msp-queue[15690]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=03:26:33, xdelay=00:06:18, mailer=relay, pri=932407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:20:02 server CRON[21888]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 06:26:22 server sm-msp-queue[21907]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=00:59:15, xdelay=00:06:18, mailer=relay, pri=302407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:27:02 server CRON[24021]: (root) CMD (cd / && run-parts --report /etc/cron.hourly) Jun 27 06:32:40 server sm-msp-queue[21907]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=03:46:33, xdelay=00:06:18, mailer=relay, pri=1022407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:39:01 server CRON[27941]: (root) CMD ([ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) -delete) Jun 27 06:40:02 server CRON[28110]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 06:46:22 server sm-msp-queue[28125]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=01:19:15, xdelay=00:06:18, mailer=relay, pri=392407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:52:40 server sm-msp-queue[28125]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=04:06:33, xdelay=00:06:18, mailer=relay, pri=1112407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 06:52:40 server sm-msp-queue[28125]: q5QMk7S9009582: q5R2e4uo028125: sender notify: Warning: could not send message for past 4 hours Jun 27 06:52:44 server sm-msp-queue[28125]: q5R2e4uo028125: to=root, delay=00:00:04, xdelay=00:00:04, mailer=relay, pri=33690, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:00:02 server CRON[1543]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 07:06:21 server sm-msp-queue[1560]: q5R2e4uo028125: to=root, delay=00:13:41, xdelay=00:06:18, mailer=relay, pri=123690, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:09:01 server CRON[3986]: (root) CMD ([ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) -delete) Jun 27 07:12:39 server sm-msp-queue[1560]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=01:45:32, xdelay=00:06:18, mailer=relay, pri=482407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:18:57 server sm-msp-queue[1560]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=04:32:50, xdelay=00:06:18, mailer=relay, pri=1202407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:20:02 server CRON[7760]: (smmsp) CMD (test -x /etc/init.d/sendmail && /usr/share/sendmail/sendmail cron-msp) Jun 27 07:26:22 server sm-msp-queue[7775]: q5R2e4uo028125: to=root, delay=00:33:42, xdelay=00:06:18, mailer=relay, pri=213690, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:27:01 server CRON[9887]: (root) CMD (cd / && run-parts --report /etc/cron.hourly) Jun 27 07:32:40 server sm-msp-queue[7775]: q5R1R7Ue004056: to=root, ctladdr=root (0/0), delay=02:05:33, xdelay=00:06:18, mailer=relay, pri=572407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:38:58 server sm-msp-queue[7775]: q5QMk7S9009582: to=root, ctladdr=root (0/0), delay=04:52:51, xdelay=00:06:18, mailer=relay, pri=1292407, relay=[127.0.0.1] [127.0.0.1], dsn=4.0.0, stat=Deferred: Connection timed out with [127.0.0.1] Jun 27 07:39:01 server CRON[13813]: (root) CMD ([ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth : root@server:~# df -h Filesystem Size Used Avail Use% Mounted on /dev/simfs 20G 2.3G 18G 12% / - Jun 26 16:22:41 server varnishd[1413]: Child (32425) died signal=3 Jun 26 16:22:41 server varnishd[1413]: child (21687) Started Jun 26 16:22:41 server varnishd[1413]: Child (21687) said Child starts Jun 26 16:22:41 server varnishd[1413]: Child (21687) said SMF.s0 mmap'ed 1073741824 bytes of 1073741824 Jun 26 16:34:28 server -- MARK -- Jun 26 16:54:29 server -- MARK -- Jun 26 17:14:29 server -- MARK -- Jun 26 17:34:29 server -- MARK -- Jun 26 17:54:29 server -- MARK -- Jun 26 18:14:29 server -- MARK -- Jun 26 18:34:29 server -- MARK -- Jun 26 18:54:29 server -- MARK -- Jun 26 19:14:29 server -- MARK -- Jun 26 19:34:29 server -- MARK -- Jun 26 19:54:29 server -- MARK -- Jun 26 20:14:29 server -- MARK -- Jun 26 20:34:29 server -- MARK -- Jun 26 20:48:12 server exiting on signal 15 Jun 26 20:51:58 server syslogd 1.5.0#6ubuntu1: restart. Jun 26 20:52:01 server varnishd[1324]: Platform: Linux,2.6.18-308.el5.028stab099.3,i686,-sfile,-smalloc,-hcritbit Jun 26 21:11:58 server -- MARK -- Jun 26 21:31:58 server -- MARK -- Jun 26 21:51:58 server -- MARK -- Jun 26 22:11:58 server -- MARK -- Jun 26 22:31:58 server -- MARK -- Jun 26 22:51:58 server -- MARK -- Jun 26 23:11:58 server -- MARK -- Jun 26 23:31:58 server -- MARK -- Jun 26 23:51:58 server -- MARK -- Jun 27 00:11:58 server -- MARK -- Jun 27 00:23:42 server exiting on signal 15 Jun 27 02:21:10 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 02:21:12 server varnishd[1341]: Platform: Linux,2.6.18-308.el5.028stab099.3,i686,-sfile,-smalloc,-hcritbit Jun 27 02:41:10 server -- MARK -- Jun 27 02:46:41 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 03:20:44 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 03:20:46 server varnishd[1238]: Platform: Linux,2.6.18-308.el5.028stab099.3,i686,-sfile,-smalloc,-hcritbit Jun 27 03:20:46 server varnishd[1238]: child (1239) Started Jun 27 03:20:46 server varnishd[1238]: Child (1239) said Child starts Jun 27 03:20:46 server varnishd[1238]: Child (1239) said SMF.s0 mmap'ed 1073741824 bytes of 1073741824 Jun 27 03:32:52 server exiting on signal 15 Jun 27 03:33:16 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 03:33:31 server varnishd[1372]: Platform: Linux,2.6.18-308.el5.028stab099.3,i686,-sfile,-smalloc,-hcritbit Jun 27 03:53:16 server -- MARK -- Jun 27 04:13:16 server -- MARK -- Jun 27 04:33:16 server -- MARK -- Jun 27 04:53:16 server -- MARK -- Jun 27 05:13:16 server -- MARK -- Jun 27 05:27:42 server syslogd 1.5.0#6ubuntu1: restart. Jun 27 05:53:17 server -- MARK -- Jun 27 06:13:17 server -- MARK -- Jun 27 06:33:17 server -- MARK -- Jun 27 06:53:17 server -- MARK -- Jun 27 07:13:17 server -- MARK -- Jun 27 07:33:17 server -- MARK -- Jun 27 07:53:17 server -- MARK -- Jun 27 08:13:17 server -- MARK -- Jun 27 08:33:17 server -- MARK -- Jun 27 08:53:17 server -- MARK -- Jun 27 09:13:17 server -- MARK -- Jun 27 09:33:17 server -- MARK -- Jun 27 09:53:17 server -- MARK -- Jun 27 10:13:17 server -- MARK -- Jun 27 10:33:17 server -- MARK -- Jun 27 10:53:17 server -- MARK -- Jun 27 11:13:17 server -- MARK -- Jun 27 11:33:17 server -- MARK -- Jun 27 11:53:18 server -- MARK -- Jun 27 12:13:18 server -- MARK -- Jun 27 12:33:18 server -- MARK -- Jun 27 12:53:18 server -- MARK -- Jun 27 13:13:18 server -- MARK -- Jun 27 13:33:18 server -- MARK -- Jun 27 13:53:18 server -- MARK -- Jun 27 14:13:18 server -- MARK -- Jun 27 14:33:18 server -- MARK -- Jun 27 14:53:18 server -- MARK -- -- root@server:~# cat /var/log/nginx/error.log 2012/06/27 03:32:54 [alert] 1199#0: worker process 1203 exited on signal 9 2012/06/27 03:32:54 [alert] 1199#0: worker process 1200 exited on signal 9 2012/06/27 03:32:54 [alert] 1199#0: worker process 1201 exited on signal 9 2012/06/27 03:32:54 [alert] 1199#0: worker process 1202 exited on signal 9 root@server:~# cat /var/log/nginx/access.log 31.210.99.87 - - [27/Jun/2012:09:09:08 +0400] "GET /w00tw00t.at.ISC.SANS.DFind:) HTTP/1.1" 400 172 "-" "-" 88.191.138.103 - - [27/Jun/2012:13:27:08 +0400] "GET /cms/cmx.jsp HTTP/1.1" 301 184 "-" "-" 88.191.138.103 - - [27/Jun/2012:13:27:08 +0400] "GET /iesvc/iesvc.jsp HTTP/1.1" 301 184 "-" "-" 88.191.138.103 - - [27/Jun/2012:13:27:08 +0400] "GET /cmd2/index.jsp HTTP/1.1" 301 184 "-" "-" 88.191.138.103 - - [27/Jun/2012:13:27:09 +0400] "GET /cmd/index.jsp HTTP/1.1" 301 184 "-" "-" 58.97.147.197 - - [27/Jun/2012:17:17:19 +0400] "GET / HTTP/1.1" 301 184 "-" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.5 (KHTML, like Gecko) Chrome/19.0.1084.56 Safari/536.5" 58.97.147.197 - - [27/Jun/2012:17:17:37 +0400] "GET / HTTP/1.1" 301 184 "-" "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_7_4) AppleWebKit/536.5 (KHTML, like Gecko) Chrome/19.0.1084.56 Safari/536.5" 58.97.147.197 - - [27/Jun/2012:17:17:38 +0400] "-" 400 0 "-" "-" 58.97.147.197 - - [27/Jun/2012:17:17:38 +0400] "-" 400 0 "-" "-" 58.97.147.197 - - [27/Jun/2012:17:17:48 +0400] "-" 400 0 "-" "-" - root@server:~# cat /var/log/daemon.log Jun 26 20:48:10 server xinetd[1177]: Exiting... Jun 26 20:51:58 server xinetd[1174]: Reading included configuration file: /etc/xinetd.d/daytime [file=/etc/xinetd.d/daytime] [line=28] Jun 26 20:51:58 server xinetd[1174]: Reading included configuration file: /etc/xinetd.d/discard [file=/etc/xinetd.d/discard] [line=26] Jun 26 20:51:58 server xinetd[1174]: Reading included configuration file: /etc/xinetd.d/echo [file=/etc/xinetd.d/echo] [line=25] Jun 26 20:51:58 server xinetd[1174]: Reading included configuration file: /etc/xinetd.d/time [file=/etc/xinetd.d/time] [line=26] Jun 26 20:51:58 server xinetd[1174]: removing chargen Jun 26 20:51:58 server xinetd[1174]: removing chargen Jun 26 20:51:58 server xinetd[1174]: removing daytime Jun 26 20:51:58 server xinetd[1174]: removing daytime Jun 26 20:51:58 server xinetd[1174]: removing discard Jun 26 20:51:58 server xinetd[1174]: removing discard Jun 26 20:51:58 server xinetd[1174]: removing echo Jun 26 20:51:58 server xinetd[1174]: removing echo Jun 26 20:51:58 server xinetd[1174]: removing time Jun 26 20:51:58 server xinetd[1174]: removing time Jun 26 20:51:58 server xinetd[1174]: xinetd Version 2.3.14 started with libwrap loadavg options compiled in. Jun 26 20:51:58 server xinetd[1174]: Started working: 0 available services Jun 26 20:52:01 server vnstatd[1330]: vnStat daemon 1.11 started. Jun 26 20:52:01 server vnstatd[1330]: Monitoring: venet0 Jun 27 00:23:41 server xinetd[1174]: Exiting... Jun 27 02:21:12 server vnstatd[1349]: vnStat daemon 1.11 started. Jun 27 02:21:12 server vnstatd[1349]: Monitoring: venet0 Jun 27 03:20:44 server xinetd[1166]: attribute: disable should not be in default section [file=/etc/xinetd.conf] [line=12] Jun 27 03:20:44 server xinetd[1166]: Reading included configuration file: /etc/xinetd.d/chargen [file=/etc/xinetd.conf] [line=15] Jun 27 03:20:44 server xinetd[1166]: Reading included configuration file: /etc/xinetd.d/daytime [file=/etc/xinetd.d/daytime] [line=28] Jun 27 03:20:44 server xinetd[1166]: Reading included configuration file: /etc/xinetd.d/discard [file=/etc/xinetd.d/discard] [line=26] Jun 27 03:20:44 server xinetd[1166]: Reading included configuration file: /etc/xinetd.d/echo [file=/etc/xinetd.d/echo] [line=25] Jun 27 03:20:44 server xinetd[1166]: Reading included configuration file: /etc/xinetd.d/time [file=/etc/xinetd.d/time] [line=26] Jun 27 03:20:44 server xinetd[1166]: removing chargen Jun 27 03:20:44 server xinetd[1166]: removing chargen Jun 27 03:20:44 server xinetd[1166]: removing daytime Jun 27 03:20:44 server xinetd[1166]: removing daytime Jun 27 03:20:44 server xinetd[1166]: removing discard Jun 27 03:20:44 server xinetd[1166]: removing discard Jun 27 03:20:44 server xinetd[1166]: removing echo Jun 27 03:20:44 server xinetd[1166]: removing echo Jun 27 03:20:44 server xinetd[1166]: removing time Jun 27 03:20:44 server xinetd[1166]: removing time Jun 27 03:20:44 server xinetd[1166]: xinetd Version 2.3.14 started with libwrap loadavg options compiled in. Jun 27 03:20:44 server xinetd[1166]: Started working: 0 available services Jun 27 03:20:46 server vnstatd[1249]: vnStat daemon 1.11 started. Jun 27 03:20:46 server vnstatd[1249]: Monitoring: venet0 Jun 27 03:32:41 server xinetd[1166]: Exiting... Jun 27 03:33:32 server vnstatd[1380]: vnStat daemon 1.11 started. Jun 27 03:33:32 server vnstatd[1380]: Monitoring: venet0 root@server:~# - Anything else you need let me know

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• mysql: Bind on unix socket: Permission denied

  - by Alex

  Can't start mysql with: sudo /usr/bin/mysqld_safe --datadir=/srv/mysql/myDB --log-error=/srv/mysql/logs/mysqld-myDB.log --pid-file=/srv/mysql/pids/mysqld-myDB.pid --user=mysql --socket=/srv/mysql/sockets/mysql-myDB.sock --port=3700 120222 13:40:48 mysqld_safe Starting mysqld daemon with databases from /srv/mysql/myDB 120222 13:40:54 mysqld_safe mysqld from pid file /srv/mysql/pids/mysqld-myDB.pid ended /srv/mysql/logs/mysqld-myDB.log: 120222 13:43:53 mysqld_safe Starting mysqld daemon with databases from /srv/mysql/myDB 120222 13:43:53 [Note] Plugin 'FEDERATED' is disabled. /usr/sbin/mysqld: Table 'plugin' is read only 120222 13:43:53 [ERROR] Can't open the mysql.plugin table. Please run mysql_upgrade to create it. 120222 13:43:53 InnoDB: Completed initialization of buffer pool 120222 13:43:53 InnoDB: Started; log sequence number 32 4232720908 120222 13:43:53 [ERROR] Can't start server : Bind on unix socket: Permission denied 120222 13:43:53 [ERROR] Do you already have another mysqld server running on socket: /srv/mysql/sockets/mysql-myDB.sock ? 120222 13:43:53 [ERROR] Aborting 120222 13:43:53 InnoDB: Starting shutdown... One instance mysqld is running: $ ps aux | grep mysql mysql 1093 0.0 0.2 169972 18700 ? Ssl 11:50 0:02 /usr/sbin/mysqld $ Port 3700 is available: $ netstat -a | grep 3700 $ Directory with sockets is empty: $ ls /srv/mysql/sockets/ $ There are all permissions: $ ls -l /srv/mysql/ total 20 drwxrwxrwx 2 mysql mysql 4096 2012-02-22 13:28 logs drwxrwxrwx 13 mysql mysql 4096 2012-02-22 13:44 myDB drwxrwxrwx 2 mysql mysql 4096 2012-02-22 12:55 pids drwxrwxrwx 2 mysql mysql 4096 2012-02-22 12:55 sockets drwxrwxrwx 2 mysql mysql 4096 2012-02-22 13:25 version Apparmor config: $cat /etc/apparmor.d/usr.sbin.mysqld # vim:syntax=apparmor # Last Modified: Tue Jun 19 17:37:30 2007 #include <tunables/global> /usr/sbin/mysqld flags=(complain) { #include <abstractions/base> #include <abstractions/nameservice> #include <abstractions/user-tmp> #include <abstractions/mysql> #include <abstractions/winbind> capability dac_override, capability sys_resource, capability setgid, capability setuid, network tcp, /etc/hosts.allow r, /etc/hosts.deny r, /etc/mysql/*.pem r, /etc/mysql/conf.d/ r, /etc/mysql/conf.d/* r, /etc/mysql/*.cnf r, /usr/lib/mysql/plugin/ r, /usr/lib/mysql/plugin/*.so* mr, /usr/sbin/mysqld mr, /usr/share/mysql/** r, /var/log/mysql.log rw, /var/log/mysql.err rw, /var/lib/mysql/ r, /var/lib/mysql/** rwk, /var/log/mysql/ r, /var/log/mysql/* rw, /{,var/}run/mysqld/mysqld.pid w, /{,var/}run/mysqld/mysqld.sock w, /srv/mysql/ r, /srv/mysql/** rwk, /sys/devices/system/cpu/ r, # Site-specific additions and overrides. See local/README for details. #include <local/usr.sbin.mysqld> } Any suggestions? UPD1: $ touch /srv/mysql/sockets/mysql-myDB.sock $ sudo chown mysql:mysql /srv/mysql/sockets/mysql-myDB.sock $ ls -l /srv/mysql/sockets/mysql-myDB.sock -rw-rw-r-- 1 mysql mysql 0 2012-02-22 14:29 /srv/mysql/sockets/mysql-myDB.sock $ sudo /usr/bin/mysqld_safe --datadir=/srv/mysql/myDB --log-error=/srv/mysql/logs/mysqld-myDB.log --pid-file=/srv/mysql/pids/mysqld-myDB.pid --user=mysql --socket=/srv/mysql/sockets/mysql-myDB.sock --port=3700 120222 14:30:18 mysqld_safe Can't log to error log and syslog at the same time. Remove all --log-error configuration options for --syslog to take effect. 120222 14:30:18 mysqld_safe Logging to '/srv/mysql/logs/mysqld-myDB.log'. 120222 14:30:18 mysqld_safe Starting mysqld daemon with databases from /srv/mysqlmyDB 120222 14:30:24 mysqld_safe mysqld from pid file /srv/mysql/pids/mysqld-myDB.pid ended $ ls -l /srv/mysql/sockets/mysql-myDB.sock ls: cannot access /srv/mysql/sockets/mysql-myDB.sock: No such file or directory $ UPD2: $ sudo netstat -lnp | grep mysql tcp 0 0 0.0.0.0:3306 0.0.0.0:* LISTEN 1093/mysqld unix 2 [ ACC ] STREAM LISTENING 5912 1093/mysqld /var/run/mysqld/mysqld.sock $ sudo lsof | grep /srv/mysql/sockets/mysql-myDB.sock lsof: WARNING: can't stat() fuse.gvfs-fuse-daemon file system /home/sears/.gvfs Output information may be incomplete. UPD3: $ cat /etc/mysql/my.cnf # # The MySQL database server configuration file. # # You can copy this to one of: # - "/etc/mysql/my.cnf" to set global options, # - "~/.my.cnf" to set user-specific options. # # One can use all long options that the program supports. # Run program with --help to get a list of available options and with # --print-defaults to see which it would actually understand and use. # # For explanations see # http://dev.mysql.com/doc/mysql/en/server-system-variables.html # This will be passed to all mysql clients # It has been reported that passwords should be enclosed with ticks/quotes # escpecially if they contain "#" chars... # Remember to edit /etc/mysql/debian.cnf when changing the socket location. [client] port = 3306 socket = /var/run/mysqld/mysqld.sock # Here is entries for some specific programs # The following values assume you have at least 32M ram # This was formally known as [safe_mysqld]. Both versions are currently parsed. [mysqld_safe] socket = /var/run/mysqld/mysqld.sock nice = 0 [mysqld] # # * Basic Settings # # # * IMPORTANT # If you make changes to these settings and your system uses apparmor, you may # also need to also adjust /etc/apparmor.d/usr.sbin.mysqld. # user = mysql socket = /var/run/mysqld/mysqld.sock port = 3306 basedir = /usr datadir = /var/lib/mysql tmpdir = /tmp skip-external-locking # # Instead of skip-networking the default is now to listen only on # localhost which is more compatible and is not less secure. #bind-address = 127.0.0.1 # # * Fine Tuning # key_buffer = 16M max_allowed_packet = 16M thread_stack = 192K thread_cache_size = 8 # This replaces the startup script and checks MyISAM tables if needed # the first time they are touched myisam-recover = BACKUP #max_connections = 100 #table_cache = 64 #thread_concurrency = 10 # # * Query Cache Configuration # query_cache_limit = 1M query_cache_size = 16M # # * Logging and Replication # # Both location gets rotated by the cronjob. # Be aware that this log type is a performance killer. # As of 5.1 you can enable the log at runtime! #general_log_file = /var/log/mysql/mysql.log #general_log = 1 log_error = /var/log/mysql/error.log # Here you can see queries with especially long duration #log_slow_queries = /var/log/mysql/mysql-slow.log #long_query_time = 2 #log-queries-not-using-indexes # # The following can be used as easy to replay backup logs or for replication. # note: if you are setting up a replication slave, see README.Debian about # other settings you may need to change. #server-id = 1 #log_bin = /var/log/mysql/mysql-bin.log expire_logs_days = 10 max_binlog_size = 100M #binlog_do_db = include_database_name #binlog_ignore_db = include_database_name # # * InnoDB # # InnoDB is enabled by default with a 10MB datafile in /var/lib/mysql/. # Read the manual for more InnoDB related options. There are many! # # * Security Features # # Read the manual, too, if you want chroot! # chroot = /var/lib/mysql/ # # For generating SSL certificates I recommend the OpenSSL GUI "tinyca". # # ssl-ca=/etc/mysql/cacert.pem # ssl-cert=/etc/mysql/server-cert.pem # ssl-key=/etc/mysql/server-key.pem [mysqldump] quick quote-names max_allowed_packet = 16M [mysql] #no-auto-rehash # faster start of mysql but no tab completition [isamchk] key_buffer = 16M # # * IMPORTANT: Additional settings that can override those from this file! # The files must end with '.cnf', otherwise they'll be ignored. # !includedir /etc/mysql/conf.d/

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• Testing home directory scripts by setting $HOME to the location of the test directory

  - by intuited

  I have an interdependent collection of scripts in my ~/bin directory as well as a developed ~/.vim directory and some other libraries and such in other subdirectories. I've been versioning all of this using git, and have realized that it would be potentially very easy and useful to do development and testing of new and existing scripts, vim plugins, etc. using a cloned repo, and then pull the working code into my actual home directory with a merge. The easiest way to do this would seem to be to just change & export $HOME, eg cd ~/testing; git clone ~ home export HOME=~/testing/home cd ~ screen -S testing-home # start vim, write/revise plugins, edit scripts, etc. # test revisions However since I've never tried this before I'm concerned that some programs, environment variables, etc., may end up using my actual home directory instead of the exported one. Is this a viable strategy? Are there just a few outliers that I should be careful about? Is there a much better way to do this sort of thing?

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• Ctrl-C not killing process in CMD.EXE

  - by jtl999

  I've had this issue for a while even after reinstalling. Issue happens after I reinstall all my programs and not in a fresh Windows install (obviously). Might have to spin up a VM and install each program 1 by 1. I suspect it's Git for Windows with it's mini Cygwin wrapper causing this issue. Anyway the issue is basically pressing Ctrl-C does not kill the running process. However when I run cmd.exe or Git Bash or administrator Ctrl-C works great again. Disabling UAC seems to break it again. I've made a video of the issue here. Many thanks.

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• How do I install a cygwin package from the command line?

  - by Zubair

  I can install a cygwin package when I first install cygwin, but is there something like: cyginstall git kind of like apt-get?

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• How to setup etckeeper with Mercurial in Ubuntu?

  - by DeletedAccount

  Hi, I'm interested in installing etckeeper with Mercurial in my Ubuntu system. My reason is that I don't know how to use Git and don't want to learn at the moment. If I check the package description it sounds promising: kent@rat:~$ apt-cache search etckeeper etckeeper - store /etc in git, mercurial, or bzr I'm wondering how to continue on from here? I've tried Googling but I haven't found anything for the Ubuntu + etckeeper + Mercurial combination. (If you know of a good tutorial for this situation, a link is an excellent answer. No need to re-iterate.)

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• Compiz shutdown hook?

  - by ???

  I want to check 10+ local Git repositories if they have any unpushed commit, before shutdown. (I always forgot to push them, so later, the next morning I came office and back home again) I think maybe the shutdown process can check some conditions to meet, if any condition is not met, then give the user the choice to continue to shutdown or just cancel. Then, I can write something to hook the shutdown to check my Git repository to push. EDIT I have changed the title from Ubuntu shutdown hook to Compiz shutdown hook. I want to hook to the small lovely shutdown button, rather then click another ugly shortcut icon on the desktop.

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• Nagios shell script cannot be executed

  - by MeinAccount

  I'm trying to monitor GitLab with nagios. I've created the following command definition and shell script but when checking the service I'm receiving the following e-mail. How can I solve this? The file is executable. [...] nagios : 3 incorrect password attempts ; TTY=unknown ; PWD=/ ; USER=git ; COMMAND=/bin/bash -c /var/lib/nagios/custom_plugins/check_gitlab.sh Command definition: define command { command_name custom_check_gitlab command_line /var/lib/nagios/custom_plugins/check_gitlab.sh } Shell script: #! /bin/sh # [...] RAILS_ENV="production" # Script variable names should be lower-case not to conflict with internal /bin/sh variables such as PATH, EDITOR or SHELL. app_root="/home/git/gitlab" app_user="git" unicorn_conf="$app_root/config/unicorn.rb" pid_path="$app_root/tmp/pids" socket_path="$app_root/tmp/sockets" web_server_pid_path="$pid_path/unicorn.pid" sidekiq_pid_path="$pid_path/sidekiq.pid" ### Here ends user configuration ### # Switch to the app_user if it is not he/she who is running the script. if [ "$USER" != "$app_user" ]; then sudo -u "$app_user" -H -i $0 "$@"; exit; fi # Switch to the gitlab path, if it fails exit with an error. if ! cd "$app_root" ; then echo "Failed to cd into $app_root, exiting!"; exit 1 fi ### Init Script functions check_pids(){ if ! mkdir -p "$pid_path"; then echo "Could not create the path $pid_path needed to store the pids." exit 1 fi # If there exists a file which should hold the value of the Unicorn pid: read it. if [ -f "$web_server_pid_path" ]; then wpid=$(cat "$web_server_pid_path") else wpid=0 fi if [ -f "$sidekiq_pid_path" ]; then spid=$(cat "$sidekiq_pid_path") else spid=0 fi } # Checks whether the different parts of the service are already running or not. check_status(){ check_pids # If the web server is running kill -0 $wpid returns true, or rather 0. # Checks of *_status should only check for == 0 or != 0, never anything else. if [ $wpid -ne 0 ]; then kill -0 "$wpid" 2>/dev/null web_status="$?" else web_status="-1" fi if [ $spid -ne 0 ]; then kill -0 "$spid" 2>/dev/null sidekiq_status="$?" else sidekiq_status="-1" fi } check_pids check_status if [ "$web_status" != "0" -a "$sidekiq_status" != "0" ]; then echo "GitLab is not running." exit 2 fi if [ "$web_status" != "0" ]; then printf "The GitLab Unicorn webserver is \033[31mnot running\033[0m.\n" exit 1 fi if [ "$sidekiq_status" != "0" ]; then printf "The GitLab Sidekiq job dispatcher is \033[31mnot running\033[0m.\n" exit 1 fi if [ "$web_status" = "0" -a "$sidekiq_status" = "0" ]; then printf "GitLab and all it's components are \033[32mup and running\033[0m.\n" exit 0 fi

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• MBP becomes very hot after using Xcode

  - by Globalhawk

  Hardware: MBP early 2011 version OS: Mountain lion App: Xcode 4.5.2 Problem: Every time when I start Xcode, 2 or 3 processes called "git" start running. But when I quit Xcode the "git" process won't quit and are still using a lot of CPU. Then the computer becomes quite hot and the battery gets drained very quickly. If I manually kill these processes the problem is gone. I tried to reinstall Xcode several times but the problem comes back every time. It drives me crazy. Any help will be appreciated!

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• Good way to store domain CSR and KEY files

  - by Bert Goethals

  For my company I'm starting to manage more and more domains; and with that more and more certificates for those domains. What is a good way to store the basic KEY and CSR files generated? I was considering a git repo on our private code server. This does not seem secure enough though. Would you suggest and other system, or how this can be done securely with a source control system like git? Also: Does it make sense to store the CRT files and CA files in use?

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• Update server version for postgres 9.1.2

  - by Nai

  I'm trying to run a postgis sql script and I'm running into the following error. Am I correct to say that updating my server version will fix it? If so, how can I go about updating it? I'm on Mac OSX Lion and installed Postgres via brew. Apparently I have an older version installed which is 9.1.2 but installing postgis installed postgres 9.2.1 on to my system. How can I point my postgres server to the new one? nai@nyc /usr/local/share/postgis (git::master) $ psql -d template_postgis -f postgis.sql SET BEGIN psql:postgis.sql:49: ERROR: incompatible library "/usr/local/Cellar/postgresql/9.2.1/lib/postgis-2.0.so": version mismatch DETAIL: Server is version 9.1, library is version 9.2. nai@nyc /usr/local/share/postgis (git::master) $ psql psql (9.2.1, server 9.1.2) WARNING: psql version 9.2, server version 9.1. Some psql features might not work.

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