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• grub-efi refuses to chainload Windows 8.1

  - by Alexei Averchenko

  I have installed LMDE (with grub in MBR) after I installed Windows 8.1. I then installed the grub-efi package and added the custom Windows options: #!/bin/sh exec tail -n +3 $0 menuentry "Windows" { search --fs-uuid --no-floppy --set=root A89A-7F4C chainloader (${root})/EFI/Boot/bkpbootx64.efi } menuentry "Windows (backup bootloader)" { search --fs-uuid --no-floppy --set=root A89A-7F4C chainloader (${root})/EFI/Microsoft/Boot/bkpbootmgfw.efi } These are basically a leftover from my older Ubuntu setup. However, grub is refusing to load them, complaining about the invalid signature. What do I do now?

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• How do I make Linux recognize a new SATA /dev/sda drive I hot swapped in without rebooting?

  - by Philip Durbin

  Hot swapping out a failed SATA /dev/sda drive worked fine, but when I went to swap in a new drive, it wasn't recognized: [root@fs-2 ~]# tail -18 /var/log/messages May 5 16:54:35 fs-2 kernel: ata1: exception Emask 0x10 SAct 0x0 SErr 0x50000 action 0xe frozen May 5 16:54:35 fs-2 kernel: ata1: SError: { PHYRdyChg CommWake } May 5 16:54:40 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:54:45 fs-2 kernel: ata1: device not ready (errno=-16), forcing hardreset May 5 16:54:45 fs-2 kernel: ata1: soft resetting link May 5 16:54:50 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:54:55 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:54:55 fs-2 kernel: ata1: soft resetting link May 5 16:55:00 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:55:05 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:05 fs-2 kernel: ata1: soft resetting link May 5 16:55:10 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:55:40 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:40 fs-2 kernel: ata1: limiting SATA link speed to 1.5 Gbps May 5 16:55:40 fs-2 kernel: ata1: soft resetting link May 5 16:55:45 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:45 fs-2 kernel: ata1: reset failed, giving up May 5 16:55:45 fs-2 kernel: ata1: EH complete I tried a couple things to make the server find the new /dev/sda, such as rescan-scsi-bus.sh but they didn't work: [root@fs-2 ~]# echo "---" > /sys/class/scsi_host/host0/scan -bash: echo: write error: Invalid argument [root@fs-2 ~]# [root@fs-2 ~]# /root/rescan-scsi-bus.sh -l [snip] 0 new device(s) found. 0 device(s) removed. [root@fs-2 ~]# [root@fs-2 ~]# ls /dev/sda ls: /dev/sda: No such file or directory I ended up rebooting the server. /dev/sda was recognized, I fixed the software RAID, and everything is fine now. But for next time, how can I make Linux recognize a new SATA drive I have hot swapped in without rebooting? The operating system in question is RHEL5.3: [root@fs-2 ~]# cat /etc/redhat-release Red Hat Enterprise Linux Server release 5.3 (Tikanga) The hard drive is a Seagate Barracuda ES.2 SATA 3.0-Gb/s 500-GB, model ST3500320NS. Here is the lscpi output: [root@fs-2 ~]# lspci 00:00.0 RAM memory: nVidia Corporation MCP55 Memory Controller (rev a2) 00:01.0 ISA bridge: nVidia Corporation MCP55 LPC Bridge (rev a3) 00:01.1 SMBus: nVidia Corporation MCP55 SMBus (rev a3) 00:02.0 USB Controller: nVidia Corporation MCP55 USB Controller (rev a1) 00:02.1 USB Controller: nVidia Corporation MCP55 USB Controller (rev a2) 00:04.0 IDE interface: nVidia Corporation MCP55 IDE (rev a1) 00:05.0 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.1 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.2 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:06.0 PCI bridge: nVidia Corporation MCP55 PCI bridge (rev a2) 00:08.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:09.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:0a.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0b.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0c.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0d.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0e.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0f.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:18.0 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] HyperTransport Technology Configuration 00:18.1 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Address Map 00:18.2 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] DRAM Controller 00:18.3 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Miscellaneous Control 00:19.0 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] HyperTransport Technology Configuration 00:19.1 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Address Map 00:19.2 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] DRAM Controller 00:19.3 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Miscellaneous Control 03:00.0 VGA compatible controller: Matrox Graphics, Inc. MGA G200e [Pilot] ServerEngines (SEP1) (rev 02) 04:00.0 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 04:00.1 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) Update: In perhaps a dozen cases, we've been forced to reboot servers because hot swap hasn't "just worked." Thanks for the answers to look more into the SATA controller. I've included the lspci output for the problematic system above (hostname: fs-2). I could still use some help understanding what exactly isn't supported hardware-wise in terms of hot swap for that system. Please let me know what other output besides lspci might be useful. The good news is that hot swap "just worked" today on one of our servers (hostname: www-1), which is very rare for us. Here is the lspci output: [root@www-1 ~]# lspci 00:00.0 RAM memory: nVidia Corporation MCP55 Memory Controller (rev a2) 00:01.0 ISA bridge: nVidia Corporation MCP55 LPC Bridge (rev a3) 00:01.1 SMBus: nVidia Corporation MCP55 SMBus (rev a3) 00:02.0 USB Controller: nVidia Corporation MCP55 USB Controller (rev a1) 00:02.1 USB Controller: nVidia Corporation MCP55 USB Controller (rev a2) 00:04.0 IDE interface: nVidia Corporation MCP55 IDE (rev a1) 00:05.0 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.1 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.2 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:06.0 PCI bridge: nVidia Corporation MCP55 PCI bridge (rev a2) 00:08.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:09.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:0b.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0c.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0f.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:18.0 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] HyperTransport Configuration 00:18.1 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Address Map 00:18.2 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] DRAM Controller 00:18.3 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Miscellaneous Control 00:18.4 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Link Control 00:19.0 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] HyperTransport Configuration 00:19.1 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Address Map 00:19.2 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] DRAM Controller 00:19.3 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Miscellaneous Control 00:19.4 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Link Control 03:00.0 VGA compatible controller: Matrox Graphics, Inc. MGA G200e [Pilot] ServerEngines (SEP1) (rev 02) 04:00.0 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 04:00.1 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 09:00.0 SCSI storage controller: LSI Logic / Symbios Logic SAS1064ET PCI-Express Fusion-MPT SAS (rev 04)

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• hadoop install cluster

  - by chnet

  Is it possible to run hadoop on multi-node and these nodes install hadoop on different paths? I noticed the tutorial, such as Michael Noll's, http://www.michael-noll.com/tutorials/running-hadoop-on-ubuntu-linux-multi-node-cluster/, asks hadoop to be installed on different nodes with the same installation path. I tried to run hadoop on multi-node. Each node installed hadoop on different path. But not success. I noticed that the hadoop assume installation paths are the same in default. The problem is when I execute start-dfs.sh it tries to start hadoop deamons on the salve nodes from the same path as on master. "Whereas the installation path is different. Were the relevant files modified to reflect the installed locations on each node"? Which file I should modify to reflect the installed locations on each node?

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• HP-UX - custom rsync path

  - by stack_zen

  Hi. There are a range of HP-UX 11.11 hosts I'm unable to install rsync (I'm limited to a non-privileged user) I've extracted both rsync binary and libpopt.sl, libiconv.sl, libintl.sl from the depots into one of that user's directories: /home/zenith/rsync/ Problem is, I can't get my RH Linux box communicating with it: rsync -e --rsync-path=/home/zenith/rsync/rsync --compress=9 -pgtov --filter=+rs_/'*.log' --exclude='*' [email protected]:/home/zenith/service/logs/ /u01/rsync_depot/service/192.102.14.18/ /usr/lib/dld.sl: Can't find path for shared library: libintl.sl /usr/lib/dld.sl: No such file or directory sh: 1644 Abort(coredump) I've added to the remote host .profile export SHLIB_PATH=/usr/lib:/home/zenith/rsync export PATH=$PATH:/home/zenith/rsync but still, no libintl.sl is found. How can I initialize the correct env variable/ get this to work?

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• How do I execute a command before kickstart parses ks.cfg?

  - by Crazy Chenz

  How do I execute a command before kickstart parses ks.cfg? My specific problem is that I want to install redhat into a tmpfs by telling kickstart: part / --fstype ext3 --size 1000 --maxsize 4000 --ondisk loop1 I've tried doing: %pre #!/bin/sh mkdir /tmp-root mount -t tmpfs tmpfs /tmp-root dd if=/dev/zero of=/tmp-root/tmp-root.img bs=4096 count=1000000 losetup /dev/loop1 /tmp-root/tmp-root.img but that is not done early enough. Ugh! Update: I'm beginning to think it has nothing to do with being done early enough. I believe it has to do with anaconda and kudzu not thinking that a loopback device is a valid device. I'm not a python guy, so the idea of hacking up the kickstart code sucks! -Vinnie

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• Using Komodo IDE as Text editor from the OS X terminal

  - by lexu

  According to this URL I should be able to start Komodo IDE from the command line when I want to edit a file. I set up the symbolic link using (on single line) ln -sf "/Applications/Komodo IDE.app/Contents/MacOS/komodo" /Users/lexu/bin/komodo but when I type afg-2:~ lexu$ komodo .bash_profile I get dyld: Library not loaded: /usr/lib/libsqlite3.dylib Referenced from: /System/Library/Frameworks/Security.framework/Versions/A/Security Reason: Incompatible library version: Security requires version 9.0.0 or later, but libsqlite3.dylib provides version 1.0.0 /Applications/Komodo IDE.app/Contents/MacOS/run-mozilla.sh: line 131: 4370 Trace/BPT trap "$prog" ${1+"$@"} and a dialog that says My guess is I need to somehow let Komodo know it needs to use different libraries? Does someone have this working?

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• Bash Script Exits su or ssh Session Rather than Script

  - by Russ

  I am using CentOS 5.4. I created a bash script that does some checking before running any commands. If the check fails, it will simply exit 0. The problem I am having is that on our server, the script will exit the su or ssh session when the exit 0 is called. #!/bin/bash # check if directory has contents and exit if none if [ -z "`ls /ebs_raid/import/*.txt 2>/dev/null`" ]; then echo "ok" exit 0 fi here is the output: [root@ip-10-251-86-31 ebs_raid]# . test.sh ok [russ@ip-10-251-86-31 ebs_raid]$ as you can see, I was removed from my sudo session, if I wasn't in the sudo session, it would have logged me out of my ssh session. I am not sure what I am doing wrong here or where to start.

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• Lingering tcp connection in LISTEN state

  - by Silvio Donnini

  My java application can sometimes be killed by an external script. This can be done either with SIGTERM or with SIGKILL. The application is a server which receives many connections per second, and it can be killed while trying to serve them. I would like to restart the application whenever it's killed, so I have prepared a script for that purpose. The problem is that, once the app has been killed, the new application instance can't bind to the port used by the previous instance, because the "Address is already in use". The previous instance's process has been definitely terminated, anyway the offending listening port is still there, but it is assigned to bash (or sh on other machines). Obviouly, my goal is to restart the application and let it bind successfully to the previous address. I've tried waiting more than 200 seconds before restarting to no avail, anyway I can't afford to wait that much. I've encountered this problem on all the machines I've ran the application (which is a jetty server with java 1.6). Any suggestion is appreciated, thanks, Silvio

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• Conky - How to get weather alerts using rss?

  - by BeSlayed

  Quick question about how to get weather alerts with conky. I'm using the following bit of code: ${execpi 3600 ~/.conky/scripts/conky-rss.sh "http://www.weather.gov/alerts/wwarssget.php?zone=MDZ006"|sed '1,3d'|fold -sw 62} This (correctly) display a message to the effect "There are no weather alerts for ...." when there are no weather alerts. However, when there is an alert, it simply displays a message like "Short-term forecast for ..." with no further information. Any suggestions? How are other people getting weather alert info in their conkys?

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• Error installing Arch Linux

  - by Garethj94

  So, I am trying to install Arch Linux on my Acer Aspire 4830tg, but I keep running into problems. Some background knowledge, I am trying to install Arch off a usb stick and I got the iso image using bittorrent. I am also trying to install it alongside of Windows 8 (which is already installed). So when I boot into Arch linux I get this error: :: Mounting '/dev/disk/by-label/ARCH_201212' to 'run/archiso/bootmnt' Waiting 30 seconds for device /dev/disk/by-label/ARCH_201212 ... ERROR: '/dev/disk/by-label/ARCH_201212' device did not show up after 30 seconds... Falling back to interactive prompt You can try to fix the problem manually, log out when you are finished sh: can't access tty; job control turned off I know that it will work if I run it on a virtual machine but whenever I try to install it on my laptop I keep getting this error. And since you can't register for the Arch forums without a Arch terminal to run their captcha command I can't ask this on their forums.

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• Running scripts from another directory

  - by Desmond Hume

  Quite often, the script I want to execute is not located in my current working directory and I don't really want to leave it. Is it a good practice to run scripts (BASH, Perl etc.) from another directory? Will they usually find all the stuff they need to run properly? If so, what is the best way to run a "distant" script? Is it . /path/to/script or sh /path/to/script and how to use sudo in such cases? This, for example, doesn't work: sudo . /path/to/script

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• DPMS, keep screen off when lid shut

  - by Evan Teran

  I have a laptop running linux. In my xorg configuration, I have DPMS setup so that the screen automatically turns off during several events. In addition to that I have to the following script tied to ACPI lid open/close events: #!/bin/sh for i in $(pidof X); do CMD=$(ps --no-heading $i) XAUTH="$(echo $CMD | sed -n 's/.*-auth \(.*\)/\1/p')" DISPLAY="$(echo $CMD | sed -n 's/.* \(:[0-9]\) .*/\1/p')" # turn the display off or back on export XAUTHORITY=$XAUTH /usr/bin/xset -display $DISPLAY dpms force $1 done Basically, this script takes one parameter ("on" or "off") then iterates through all of my running X sessions and either turns on or turns off the monitor. Here's my issue. When I close the lid of the laptop, the screen goes off as expected, but if a mouse event occurs (like if something bumps into the table...) then the screen turns back on even though it is closed (I can see the light through the side of the laptop). Is there a way to prevent the screen from turning on during a mouse event if the lid is closed?

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• No GUI after upgrade to Ubuntu 9.10 (boots to command line)

  - by Gathris

  I have just upgraded to Ubuntu 9.10 (network upgrade using the update manager, from 9.04 which had different graphics related problems) and when I try to boot into it all I get a small Ubuntu logo, flickering text and then the tty1 command line with a logon prompt. startx gives following error: Fatal server error: no screens found I traced down a tutorial that said I needed the latest graphics drivers (Gigabyte ATI Radeon 4650 HD installed with 9.10 catalyst drivers) so I did using the 'sh' command and a USB stick (I have a working Windows partition) and it installed fine but did not fix the problem. Edit: Thanks to UK and Arjan van Bentem below I was able to understand the full error message of start x: Parse error on lone 2 of /etc/X11/xorg.conf 'nameserver' is not a valid keyword in this section Fatal server error: no screens found This has nothing to do with a graphical error (sorry if I misled anyone) but the xorg.conf file has 3 lines in it and lines 2-3 have an entry 'nameserver'. Using the nano command I commented out (using a # before the entries) the nameservers and can now boot Ubuntu. Thanks to everyone for their help.

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• How to use HTML markup tags inside Bash script

  - by CONtext

  I have crontab and a simple bash script that sends me emails every often containing PHP, NGINX, MYSQL errors from their log files. This is a simplified example. #/home/user/status.sh [email protected] PHP_ERROR=`tail -5 /var/log/php-fpm/error.log` NGINX_ERROR=`tail -5 /var/log/nginx/error.log` MYSQL_ERROR=`tail /var/log/mysqld.log` DISK_SPACE=`df -h` echo " Today's, server report:: ================================== DISK_SPACE: $DISK_SPACE --------------------------------- MEMORY_USAGE: $MEMORY_USAGE ----------------------------------- NGINX ERROR: $NGINX_ERROR ----------------------------------- PHP ERRORS: $PHP_ERROR ------------------------------------ MYSQL_ERRORS: $MYSQL_ERROR ------------------------------------- " | mail -s "Server reports" $EMAIL I know this is a very basic usage, but as you can see, I am trying to separate the errors, but not of the html tags including \n are working. So, my question is, is it possible to use HTML tags to format the text, if not .. then what are the alternatives.

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• Automated git push attempt does not work - authentication issue

  - by at least three characters

  I'm trying to automate a very periodic git add/commit/push cycle using a shell script and cron under OS X 10.8.5. The script is as basic as one would expect it to be: cd /my/directory git add . git commit -m "a commit message with the date" git push -u origin master I've tried running it both as root as well as a non-root user. When I do this manually, I get a dialog box from OS X requesting that I authenticate the operation. Running the script (either using cron or just using sh) ends up sending a message (via mail) to whichever user's cron executed the script saying that it was unable to write a file in the .git directory because of a permissions issue (which is most likely manual execution requires authentication). Is there any way to circumvent this issue, or give the script permission to perform this operation without having me intervene each time?

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• How could I easily pack a directory to an ext4 loop partition image?

  - by Alvin Wong

  I would like to pack the content of a directory into an ext4 partition image easily, without mounting a loop device. Background: I am building a version of Android which will mount system partitions as a loop device for ARM. Though I can create those partition images by hand using loop devices, it is very troublesome. I want to use an sh script to automatically do the work, and without needing to loop mount the dd-created image and use cp -rp. The best is to directly pack the files into an image file. Question: Is there any simple command-line tools without needing loop mount and root permission that can pack files into an ext4 partition image?

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• Close all Mac Terminal windows, but the one running a script

  - by Greg Brown

  I am trying to create a shell script that runs a python simulation programing in 4 terminal windows. I have the script that launches the program four times in four separate terminal windows(total of 5 windows, 4 for the python programs, and one to control the other terminal windows). I want to now create a script that I can run in the control terminal window that closes and kills the programs of the other four terminal windows, but still have the control one open. What I have so far is something like this #!/bin/sh osascript -e 'tell app "Terminal" do script "killall python" end tell' osascript -e 'tell app "Terminal" to quit' osascript -e 'tell app "Terminal" to open' The problem is that the last line doesn't work because it closes all the windows including the one the script is executing in. I am not really familiar with shell or apple script so any help would be welcomed. I posted on Stack, but I think this might be a better place for an automation type question. Thanks

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• Munin email notification

  - by Prashanth

  I am trying to get munin to notify me via email. I have configured munin and it reports critical and warning values but no alerts are being sent neither is any script being called. Can you please help me out with this? I have included part of the munin.conf below # Drop [email protected] and [email protected] an email everytime # something changes (OK -> WARNING, CRITICAL -> OK, etc) #contact.someuser.command mail -s "Munin notification" [email protected]\ contact.prashanth.command echo "Munin notification" | sendmail -t [email protected] contact.prashanth.always_send warning critical contact.root.command echo "Munin notification" | sendmail -t [email protected] contact.root.always_send warning critical contact.pipevia.command | /home/prashanth/script.sh /home/prashanth/script.sh None of this works. What am i missing here and why are emails not being sent? Thanks in advance. here is the munin-limits.log 2011/09/26 14:58:12 Opened log file 2011/09/26 14:58:12 [INFO] Starting munin-limits, getting lock /var/run/munin/munin-limits.lock 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 722. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 725. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 740. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 754. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 759. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $text in length at /usr/share/perl5/Munin/Master/LimitsOld.pm line 774. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $res[3] in join or string at /usr/share/perl5/Munin/Master/LimitsOld.pm line 777. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 722. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 725. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 740. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 754. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 759. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $text in length at /usr/share/perl5/Munin/Master/LimitsOld.pm line 774. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $res[15] in join or string at /usr/share/perl5/Munin/Master/LimitsOld.pm line 777. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 722. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 725. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 740. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 754. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 759. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $text in length at /usr/share/perl5/Munin/Master/LimitsOld.pm line 774. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $res[1] in join or string at /usr/share/perl5/Munin/Master/LimitsOld.pm line 777. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 722. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 725. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 740. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 754. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $a[0] in pattern match (m//) at /usr/share/perl5/Munin/Master/LimitsOld.pm line 759. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $text in length at /usr/share/perl5/Munin/Master/LimitsOld.pm line 774. 2011/09/26 14:58:12 [PERL WARNING] Use of uninitialized value $res[1] in join or string at /usr/share/perl5/Munin/Master/LimitsOld.pm line 777. 2011/09/26 14:58:12 Baz? 2011/09/26 14:58:12 [INFO] munin-limits finished (0.02 sec) 2011/09/26 14:58:12 Command "prashanth" stderr: Munin notification - this is a test mail from the user prashanth | sendmail -t [email protected]

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• How do I make Linux recognize a new SATA /dev/sda drive I hot swapped in without rebooting?

  - by Philip Durbin

  Hot swapping out a failed SATA /dev/sda drive worked fine, but when I went to swap in a new drive, it wasn't recognized: [root@fs-2 ~]# tail -18 /var/log/messages May 5 16:54:35 fs-2 kernel: ata1: exception Emask 0x10 SAct 0x0 SErr 0x50000 action 0xe frozen May 5 16:54:35 fs-2 kernel: ata1: SError: { PHYRdyChg CommWake } May 5 16:54:40 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:54:45 fs-2 kernel: ata1: device not ready (errno=-16), forcing hardreset May 5 16:54:45 fs-2 kernel: ata1: soft resetting link May 5 16:54:50 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:54:55 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:54:55 fs-2 kernel: ata1: soft resetting link May 5 16:55:00 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:55:05 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:05 fs-2 kernel: ata1: soft resetting link May 5 16:55:10 fs-2 kernel: ata1: link is slow to respond, please be patient (ready=0) May 5 16:55:40 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:40 fs-2 kernel: ata1: limiting SATA link speed to 1.5 Gbps May 5 16:55:40 fs-2 kernel: ata1: soft resetting link May 5 16:55:45 fs-2 kernel: ata1: SRST failed (errno=-16) May 5 16:55:45 fs-2 kernel: ata1: reset failed, giving up May 5 16:55:45 fs-2 kernel: ata1: EH complete I tried a couple things to make the server find the new /dev/sda, such as rescan-scsi-bus.sh but they didn't work: [root@fs-2 ~]# echo "---" > /sys/class/scsi_host/host0/scan -bash: echo: write error: Invalid argument [root@fs-2 ~]# [root@fs-2 ~]# /root/rescan-scsi-bus.sh -l [snip] 0 new device(s) found. 0 device(s) removed. [root@fs-2 ~]# [root@fs-2 ~]# ls /dev/sda ls: /dev/sda: No such file or directory I ended up rebooting the server. /dev/sda was recognized, I fixed the software RAID, and everything is fine now. But for next time, how can I make Linux recognize a new SATA drive I have hot swapped in without rebooting? The operating system in question is RHEL5.3: [root@fs-2 ~]# cat /etc/redhat-release Red Hat Enterprise Linux Server release 5.3 (Tikanga) The hard drive is a Seagate Barracuda ES.2 SATA 3.0-Gb/s 500-GB, model ST3500320NS. Here is the lscpi output: [root@fs-2 ~]# lspci 00:00.0 RAM memory: nVidia Corporation MCP55 Memory Controller (rev a2) 00:01.0 ISA bridge: nVidia Corporation MCP55 LPC Bridge (rev a3) 00:01.1 SMBus: nVidia Corporation MCP55 SMBus (rev a3) 00:02.0 USB Controller: nVidia Corporation MCP55 USB Controller (rev a1) 00:02.1 USB Controller: nVidia Corporation MCP55 USB Controller (rev a2) 00:04.0 IDE interface: nVidia Corporation MCP55 IDE (rev a1) 00:05.0 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.1 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.2 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:06.0 PCI bridge: nVidia Corporation MCP55 PCI bridge (rev a2) 00:08.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:09.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:0a.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0b.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0c.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0d.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0e.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0f.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:18.0 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] HyperTransport Technology Configuration 00:18.1 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Address Map 00:18.2 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] DRAM Controller 00:18.3 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Miscellaneous Control 00:19.0 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] HyperTransport Technology Configuration 00:19.1 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Address Map 00:19.2 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] DRAM Controller 00:19.3 Host bridge: Advanced Micro Devices [AMD] K8 [Athlon64/Opteron] Miscellaneous Control 03:00.0 VGA compatible controller: Matrox Graphics, Inc. MGA G200e [Pilot] ServerEngines (SEP1) (rev 02) 04:00.0 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 04:00.1 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) Update: In perhaps a dozen cases, we've been forced to reboot servers because hot swap hasn't "just worked." Thanks for the answers to look more into the SATA controller. I've included the lspci output for the problematic system above (hostname: fs-2). I could still use some help understanding what exactly isn't supported hardware-wise in terms of hot swap for that system. Please let me know what other output besides lspci might be useful. The good news is that hot swap "just worked" today on one of our servers (hostname: www-1), which is very rare for us. Here is the lspci output: [root@www-1 ~]# lspci 00:00.0 RAM memory: nVidia Corporation MCP55 Memory Controller (rev a2) 00:01.0 ISA bridge: nVidia Corporation MCP55 LPC Bridge (rev a3) 00:01.1 SMBus: nVidia Corporation MCP55 SMBus (rev a3) 00:02.0 USB Controller: nVidia Corporation MCP55 USB Controller (rev a1) 00:02.1 USB Controller: nVidia Corporation MCP55 USB Controller (rev a2) 00:04.0 IDE interface: nVidia Corporation MCP55 IDE (rev a1) 00:05.0 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.1 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:05.2 IDE interface: nVidia Corporation MCP55 SATA Controller (rev a3) 00:06.0 PCI bridge: nVidia Corporation MCP55 PCI bridge (rev a2) 00:08.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:09.0 Bridge: nVidia Corporation MCP55 Ethernet (rev a3) 00:0b.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0c.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:0f.0 PCI bridge: nVidia Corporation MCP55 PCI Express bridge (rev a3) 00:18.0 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] HyperTransport Configuration 00:18.1 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Address Map 00:18.2 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] DRAM Controller 00:18.3 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Miscellaneous Control 00:18.4 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Link Control 00:19.0 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] HyperTransport Configuration 00:19.1 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Address Map 00:19.2 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] DRAM Controller 00:19.3 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Miscellaneous Control 00:19.4 Host bridge: Advanced Micro Devices [AMD] K10 [Opteron, Athlon64, Sempron] Link Control 03:00.0 VGA compatible controller: Matrox Graphics, Inc. MGA G200e [Pilot] ServerEngines (SEP1) (rev 02) 04:00.0 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 04:00.1 PCI bridge: NEC Corporation uPD720400 PCI Express - PCI/PCI-X Bridge (rev 06) 09:00.0 SCSI storage controller: LSI Logic / Symbios Logic SAS1064ET PCI-Express Fusion-MPT SAS (rev 04)

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• Sync Iphone in Windows XP running as Virtualbox guest under Ubuntu 9.10

  - by steveth45

  I run (K)Ubuntu 9.10 as my main operating system, but I still have a valid XP license, so I've been running Windows XP as a guest operating system with Virtualbox 3.10. I cannot get Itunes (running under Windows XP) to detect the presence of my Iphone. I found this link: http://blog.rootshell.be/2009/01/15/iphone-itunes-virtualbox/ which explains how to get this Itunes-in-XP-in-Virtualbox-under-Ubuntu configuration to work, but it involves editing the file /etc/init.d/mountdevsubfs.sh which apparently does not exist in Ubuntu 9.10. Does anyone know how get Itunes in XP running as a guest in Ubuntu 9.10 to detect and sync with an Iphone?

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• rsync to windows (cygwin)

  - by abergmeier

  We have a windows file storage (don't ask) and now I want to rsync with the machine from Windows, Mac and Linux. So I installed freeSSHd (login shell is set to C:/cygwin64/bin/sh.exe), set up certificates and testing from Linux the test.dat has 0 bytes: ssh myuser@winmachinename "C:/cygwin64/bin/true.exe" > test.dat Even double checking with actual output works fine: ssh myuser@winmachinename "C:/cygwin64/bin/ls.exe" > test.dat Now, when I call rsync: rsync --progress -avz -e ssh myuser@winmachinename:/c/Users ~/test it fails with: protocol version mismatch -- is your shell clean? (see the rsync man page for an explanation) rsync error: protocol incompatibility (code 2) at compat.c(174) [Receiver=3.1.0] As far as reading the docs, this should not happen, when the first test is successful!? I am by now out of ideas - any recommendations how to debug this? EDIT: | OS | rsync version | |:--------------|:------------------------------------------| | Windows | rsync version 3.0.9 protocol version 30 | | Linux | rsync version 3.1.0 protocol version 31 |

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• Installing GitBlit GO as Service in Ubuntu Server 14.04

  - by Luis Masuelli

  I downloaded it (version 1.6.0), unpacked it in /opt/gitblit (ubuntu server 14.04.1), configured http to 8280 and disabled https assigning 0 (I expose it by https using nginx). I created gitblit user and added it to 'sudo' group by running: sudo adduser gitblit sudo (gitblit user has a strong password). I installed it as a service by running: /opt/gitblit/install-service-ubuntu.sh. I tried to start it by running: sudo service gitblit start. The message Starting gitblit server appears. It's the only message. When I hit -in the same local machine- http://127.0.0.1:8280, the connection could not be made. When I run sudo netstat -anp | grep 8280, nothing appears. I see no error messages, but the server is not starting. Question: What am I missing?

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• How to start process as a daemon?

  - by Markus Johansson

  I have created a service which consists of a web fronted (nginx), python runner glue handler (uwsgi) and my own python code (fetcher). I have made a script (deploy.sh) to start the difference services: nginx uwsgi --ini inifie.ini python fetcher.py & disown My question is regarding how I start my python daemon. I want it to run in the background. It should not print anything to my current terminal. If I add "print" calls to my fetcher script I currently see them in the terminal window. So my question is: how do I start my fetcher.py script as a daemon?

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• Is there a way I can use $PATH as defined by my bash profile?

  - by Adam Backstrom

  I spend most of my day ssh'd into servers. I have a series of aliases/functions/scripts that allow me to type p hostname from the terminal and execute GNU screen(1) on the remote side, using the following command: exec ssh hostname -t 'screen -RD'` I've only recently noticed that ssh -t does not get my custom $PATH. Here's some terminal output: adam@workstation:~:0$ sh server 'echo $PATH' /home/adam/bin:/usr/local/bin:/bin:/usr/bin:/opt/git/bin:/opt/git/libexec/git-core adam@workstation:~:0$ ssh server -t 'echo $PATH' /usr/local/bin:/bin:/usr/bin Connection to uranus.plymouth.edu closed. My biggest problem is my custom aliases only try to execute screen, since I can't guarantee an absolute path, and my $PATH is structured so the shell should find the correct one. If my $PATH settings aren't honored, my scripts don't work. Is there a way I can use $PATH as defined by my .bashrc/.bash_profile? I believe PermitUserEnvironment is disabled.

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• cannot mount remote partition using fstab/fuse

  - by HorusKol

  Using a combination of http://ubuntu-tutorials.com/2007/01/02/mount-remote-directories-securely-with-ssh-ubuntu-6061-610/ and http://www.tuxfiles.org/linuxhelp/fstab.html I figured I could mount the root of another computer to somewhere on my new laptop to make it easier to transfer files and stuff. Now, I can connect through SSH and browser the files through an ad-hoc mount - but I would like to be able to do this automatically, and so had a look at fstab. my new entry in fstab is: remote_comp:/ /var/remote_comp fuse defaults 0 0 but testing with mount -a results in the following error: /bin/sh: remote_comp:/: not found I thought the problem was because I was trying to mount the root of the other computer, but even trying sub-directories result in the same error message.

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