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  • SWI-Prolog Semantic Web Library and Python Interface

    - by John Peter Thompson Garcés
    I want to write a Python web application that queries RDF triples using Prolog. I found pyswip for interfacing Python with SWI-Prolog, and I am currently looking into SWI-Prolog's RDF capabilities. I am wondering if anyone has tried this before--and if anyone has: what did your setup look like? How do you get pyswip to work with the SWI-Prolog semantic web library? Or is there another Python-Prolog interface that makes this easier?

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  • When opening a file in perl, how can I automatically use STDIN/OUT if the file name is "-"?

    - by Ryan Thompson
    I have a perl program that takes input and output file arguments, and I'd like to support the convention of using "-" to specify standard input/output. The problem is that I can't just open the file name, because open(my $input, '<', '-') opens a file called -, not standard input. So I have to do something like this: my $input_fh; if ($input_filename eq '-') { # Special case: get the stdin handle $input_fh = *STDIN{IO}; } else { # Standard case: open the file open($input_fh, '<', $input_filename); } And similarly for the output file. Is there any way to do this without testing for the special case myself? I know I could hack the ARGV filehandle to do this for input, but that won't work for output.

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  • How to hide the console of batch scripts without losing std err/out streams

    - by cooper.thompson
    My question is similar to Running a CMD or BAT in silent mode, but with one additional constraint. If you use WshScript.Run in vbscript, you lose access to the standard in/error/out streams of the process. WshScript.Exec gives you access to the standard streams, but you can't hide your windows. How can you have your cake (hide the windows) and eat it too (have direct access to the console streams)? I'm currently thinking about a C++ executable which creates a new Windows Station and Desktop, (see MSDN) and runs a specified script within that new Desktop (I'm not yet an expert on Window Stations and Desktops, so this idea may be retarded). This idea is based loosely on Condor's USE_VISIBLE_DESKTOP feature, which, if disabled, runs Condor jobs in a non-visible Desktop. I haven't quite figured out if this requires elevated priveledge. The tradeoff of this approach is that your script can disappear into limbo if it blocks on user input. Does anyone have any additional ideas? Or feedback on the approach outlined above? Edit: Also, the purpose of our script is to set up the user environment, so running as another user, or as a system scheduled task isn't really an option (unless there are clever tricks I don't know about).

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  • How can I split my conkeror-rc config over multiple files?

    - by Ryan Thompson
    Short version: can you help me fill in this code? var conkeror_settings_dir = ".conkeror.mozdev.org/settings"; function load_all_js_files_in_dir (dir) { var full_path = get_home_directory().appendRelativePath(dir); // YOUR CODE HERE } load_all_js_files_in_dir(conkeror_settings_dir); Background I'm trying out Conkeror for web browsing. It's an emacs-like browser running on Mozilla's rendering engine, using javascript as configuration language (filling the role that elisp plays for emacs). In my emacs config, I have split my customizations into a series of files, where each file is a single unit of related options (for example, all my perl-related settings might be in perl-settings.el. All these settings files are loaded automatically by a function in my .emacs that simply loads every elisp file under my "settings" directory. I am looking to structure my Conkeror config in the same way, with my main conkeror-rc file basically being a stub that loads all the js files under a certain directory relative to my home directory. Unfortunately, I am much less literate in javascript than I am in elisp, so I don't even know how to "source" a file.

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  • Memory leak when declaring NSString from ABRecordCopyValue

    - by Ben Thompson
    I am using the following line of code... NSString *clientFirstName = (NSString *)ABRecordCopyValue(person, kABPersonFirstNameProperty); The 'analyse' feature on Xcode is saying that this giving rise to a potential memory leak. I am not releasing clientFirstName at all as I have neither alloc or retain'd it. However, I am conscious that ABRecordCopyValue may not be returning an object as say a command like [NSMutableArray arrayWithArray:someArray] would which might mean I am indeed creating a new object that I control and must release. Keen to hear thoughts...

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  • Is there a way to split a widescreen monitor in to two or more virtual monitors?

    - by Mike Thompson
    Like most developers I have grown to love dual monitors. I won't go into all the reasons for their goodness; just take it as a given. However, they are not perfect. You can never seem to line them up "just right". You always end up with the monitors at slight funny angles. And of course the bezel always gets in the way. And this is with identical monitors. The problem is much worse with different monitors -- VMWare's multi monitor feature won't even work with monitors of differnt resolutions. When you use multiple monnitors, one of them becomes your primary monitor of focus. Your focus may flip from one monitor to the other, but at any point in time you are usually focusing on only one monitor. There are exceptions to this (WinDiff, Excel), but this is generally the case. I suggest that having a single large monitor with all the benefits of multiple smaller monitors would be a better solution. Wide screen monitors are fantastic, but it is hard to use all the space efficiently. If you are writing code you are generally working on the left-hand side of the window. If you maximize an editor on a wide-screen monitor the right-hand side of the window will be a sea of white. Programs like WinSplit Revolution will help to organise your windows, but this is really just addressing the symptom, not the problem. Even with WinSplit Revolution, when you maximise a window it will take up the whole screen. You can't lock a window into a specific section of the screen. This is where virtual monitors comes in. What would be really nice is a video driver that sits on top of the existing driver, but allows a single monitor to be virtualised into multiple monitors. Control Panel would see your single physical monitor as two or more virtual monitors. The software could even support a virtual bezel to emphasise what is happening, or you could opt for seamless mode. Programs like WinSplit Revolution and UltraMon would still work. This virtual video driver would allow you to slice & dice your physical monitor into as many virtual monitors as you want. Does anybody know if such software exists? If not, are there any budding Windows display driver guru's out there willing to take up the challenge? I am not after the myriad of virtual desktop/window manager programs that are available. I get frustrated with these programs. They seem good at first but they usually have some strange behaviour and don't work well with other programs (such as WinSplit Revolution). I want the real thing!

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  • How to use R's ellipsis feature when writing your own function?

    - by Ryan Thompson
    The R language has a nifty feature for defining functions that can take a variable number of arguments. For example, the function data.frame takes any number of arguments, and each argument becomes the data for a column in the resulting data table. Example usage: > data.frame(letters=c("a", "b", "c"), numbers=c(1,2,3), notes=c("do", "re", "mi")) letters numbers notes 1 a 1 do 2 b 2 re 3 c 3 mi The function's signature includes an ellipsis, like this: function (..., row.names = NULL, check.rows = FALSE, check.names = TRUE, stringsAsFactors = default.stringsAsFactors()) { [FUNCTION DEFINITION HERE] } I would like to write a function that does something similar, taking multiple values and consolidating them into a single return value (as well as doing some other processing). In order to do this, I need to figure out how to "unpack" the ... from the function's arguments within the function. I don't know how to do this. The relevant line in the function definition of data.frame is object <- as.list(substitute(list(...)))[-1L], which I can't make any sense of. So how can I convert the ellipsis from the function's signature into, for example, a list? To be more specific, how can I write get_list_from_ellipsis in the code below? my_ellipsis_function(...) { input_list <- get.list.from.ellipsis(...) output_list <- lapply(X=input_list, FUN=do_something_interesting) return(output_list) } my_ellipsis_function(a=1:10,b=11:20,c=21:30)

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  • How can I manually interpolate string escapes in a Perl string?

    - by Ryan Thompson
    In perl suppose I have a string like 'hello\tworld\n', and what I want is: 'hello world ' That is, "hello", then a literal tab character, then "world", then a literal newline. Or equivalently, "hello\tworld\n" (note the double quotes). In other words, is there a function for taking a string with escape sequences and returning an equivalent string with all the escape sequences interpolated?

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  • Can I customize the indentation of ternary operators in emacs' cperl-mode?

    - by Ryan Thompson
    In emacs cperl-mode, ternary operators are not treated specially. If you break them over multiple lines, cperl-mode simply indents each line the same way it indents any continued statement, like this: $result = ($foo == $bar) ? 'result1' : ($foo == $baz) ? 'result2' : ($foo == $qux) ? 'result3' : ($foo == $quux) ? 'result4' : fail_result; This is not very readable. Is there some way that I can convince cperl-mode indent like this? $result = ($foo == $bar) ? 'result1' : ($foo == $baz) ? 'result2' : ($foo == $qux) ? 'result3' : ($foo == $quux) ? 'result4' : fail_result; By the way, code example from this question.

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  • More efficient way to find & tar millions of files

    - by Stu Thompson
    I've got a job running on my server at the command line prompt for a two days now: find data/ -name filepattern-*2009* -exec tar uf 2008.tar {} ; It is taking forever, and then some. Yes, there are millions of files in the target directory. But just running... find data/ -name filepattern-*2009* -print > filesOfInterest.txt ...takes only two hours or so. At the rate my job is running, it won't be finished for a couple of weeks.. That seems unreasonable. Is there a more efficient to do this? Maybe with a more complicated bash script? A secondary questions is "why is my current approach so slow?"

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  • What database table structure should I use for versions, codebases, deployables?

    - by Zac Thompson
    I'm having doubts about my table structure, and I wonder if there is a better approach. I've got a little database for version control repositories (e.g. SVN), the packages (e.g. Linux RPMs) built therefrom, and the versions (e.g. 1.2.3-4) thereof. A given repository might produce no packages, or several, but if there are more than one for a given repository then a particular version for that repository will indicate a single "tag" of the codebase. A particular version "string" might be used to tag a version of the source code in more than one repository, but there may be no relationship between "1.0" for two different repos. So if packages P and Q both come from repo R, then P 1.0 and Q 1.0 are both built from the 1.0 tag of repo R. But if package X comes from repo Y, then X 1.0 has no relationship to P 1.0. In my (simplified) model, I have the following tables (the x_id columns are auto-incrementing surrogate keys; you can pretend I'm using a different primary key if you wish, it's not really important): repository - repository_id - repository_name (unique) ... version - version_id - version_string (unique for a particular repository) - repository_id ... package - package_id - package_name (unique) - repository_id ... This makes it easy for me to see, for example, what are valid versions of a given package: I can join with the version table using the repository_id. However, suppose I would like to add some information to this database, e.g., to indicate which package versions have been approved for release. I certainly need a new table: package_version - version_id - package_id - package_version_released ... Again, the nature of the keys that I use are not really important to my problem, and you can imagine that the data column is "promotion_level" or something if that helps. My doubts arise when I realize that there's really a very close relationship between the version_id and the package_id in my new table ... they must share the same repository_id. Only a small subset of package/version combinations are valid. So I should have some kind of constraint on those columns, enforcing that ... ... I don't know, it just feels off, somehow. Like I'm including somehow more information than I really need? I don't know how to explain my hesitance here. I can't figure out which (if any) normal form I'm violating, but I also can't find an example of a schema with this sort of structure ... not being a DBA by profession I'm not sure where to look. So I'm asking: am I just being overly sensitive?

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  • Showing renames in hg log?

    - by Ryan Thompson
    I know that Mercurial can track renames of files, but how do I get it to show me renames instead of adds/removes when I do hg log? For instance, instead of: A bin/extract-csv-column.pl A bin/find-mirna-binding.pl A bin/xls2csv-separate-sheets.pl A lib/Text/CSV/Euclid.pm R src/extract-csv-column.pl R src/find-mirna-binding.pl R src/modules/Text/CSV/Euclid.pm R src/xls2csv-separate-sheets.pl I want some indication that four files have been moved. I think I read somewhere that the output is like this to preserve backward-compatibility with something-or-other, but I'm not worried about that.

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  • Using NSPredicate to filter on both Core attribute and entity

    - by Ben Thompson
    I have two entities in core data (call them entityOne and entityTwo). I have a entityOne<---entityTwo relationship between them. I am now trying to code an NSPredicate to fetch entityTwo objects on the following basis: Fetch entityTwo objects that have a relationship with a specified entityOne object. Filter out those entityTwo objects which have no value for one of their attributes. I am best doing both of these in an NSPredicate or is there a better way? I am trying the following: NSPredicate *predicate = [NSPredicate predicateWithFormat:@"(attribute <> "") AND (relationship == entityOne"]; [request setPredicate:predicate]; Any pointers on coding great fully received.

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  • In perl, how can I call a method whose name I have in a string?

    - by Ryan Thompson
    I'm trying to write some abstract code for searching through a list of similar objects for the first one whose attributes match specific values. In order to do this, I need to call a bunch of accessor methods and check all their values one by one. I'd like to use an abstraction like this: sub verify_attribute { my ($object, $attribute_method, $wanted_value) = @_; if ( call_method($object, $attribute_method) ~~ $wanted_value ) { return 1; } else { return; } } Then I can loop through a hash whose keys are accessor method names and whose values are the values I'm looking for for those attributes. For example, if that hash is called %wanted, I might use code like this to find the object I want: my $found_object; FINDOBJ: foreach my $obj (@list_of_objects) { foreach my $accessor (keys %wanted) { next FINDOBJ unless verify_attribute($obj, $accessor, $wanted{$accessor}); } # All attrs verified $found_object = $obj; last FINDOBJ; } Of course, the only problem is that call_method does not exsit. Or does it? How can I call a method if I have a string containing its name? Or is there a better solution to this whole problem?

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  • Javascript click function

    - by Gordon Carpenter-Thompson
    I've got some code which works fine in IE but unfortunately not in Google Chrome/Firefox. It relies upon calling a click() event on a button from javascript. Reading around it seems that this is an IE specific extension (doh). Is there any way I can do a similar thing in chrome + firefox? Thanks

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  • How can I make the output from tapply() into a data.frame

    - by James Thompson
    I have a data.frame in R that looks like this: score rms template aln_id description 1 -261.410 4.951 2f22A.pdb 2F22A_1 S_00001_0000002_0 2 -231.987 21.813 1wb9A.pdb 1WB9A_4 S_00002_0000002_0 3 -263.722 4.903 2f22A.pdb 2F22A_3 S_00003_0000002_0 4 -269.681 17.732 1wbbA.pdb 1WBBA_6 S_00004_0000002_0 5 -258.621 19.098 1rxqA.pdb 1RXQA_3 S_00005_0000002_0 6 -246.805 6.889 1rxqA.pdb 1RXQA_15 S_00006_0000002_0 7 -281.300 16.262 1wbdA.pdb 1WBDA_11 S_00007_0000002_0 8 -271.666 4.193 2f22A.pdb 2F22A_2 S_00008_0000002_0 9 -277.964 13.066 1wb9A.pdb 1WB9A_5 S_00009_0000002_0 10 -261.024 17.153 1yy9A.pdb 1YY9A_2 S_00001_0000003_0 I can calculate summary statistics on the data.frame like this: > tapply( d$score, d$template, mean ) 1rxqA.pdb 1wb9A.pdb 1wbbA.pdb 1wbdA.pdb 1yy9A.pdb 2f22A.pdb -252.7130 -254.9755 -269.6810 -281.3000 -261.0240 -265.5993 Is there an easy way that I coerce this output back into a data.frame? I'd like for it to have these two columns: d$template mean I love tapply, but right now I'm cutting and pasting the results from tapply into a text file and hacking it up a bit to get the summary statistics that I want with appropriate names. This feels very wrong, and I'd like to do something better!

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  • Statistics Question: Kernel Smoothing in R

    - by James Thompson
    I have data of this form: x y 1 0.19 2 0.26 3 0.40 4 0.58 5 0.59 6 1.24 7 0.68 8 0.60 9 1.12 10 0.80 11 1.20 12 1.17 13 0.39 I'm currently plotting a kernel-smoothed density estimate of the x versus y using this code: smoothed = ksmooth( d$resi, d$score, bandwidth = 6 ) plot( smoothed ) I simply want a plot of the x versus smoothed(y) values, which is ## Heading ## However, the documentation for ksmooth suggests that this isn't the best kernel-smoothing package available: This function is implemented purely for compatibility with S, although it is nowhere near as slow as the S function. Better kernel smoothers are available in other packages. What other kernel smoothers are better can these smoothers be found?

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  • Perl module for parsing natural language time duration specifications (similar to the "at" command)?

    - by Ryan Thompson
    I'm writing a perl script that takes a "duration" option, and I'd like to be able to specify this duration in a fairly flexible manner, as opposed to only taking a single unit (e.g. number of seconds). The UNIX at command implements this kind of behavior, by allowing specifications such as "now + 3 hours + 2 days". For my program, the "now" part is implied, so I just want to parse the stuff after the plus sign. (Note: the at command also parses exact date specifications, but I only want to parse durations.) Is there a perl module for parsing duration specifications like this? I don't need the exact syntax accepted by at, just any reasonable syntax for specifying time durations. Edit: Basically, I want something like DateTime::Format::Flexible for durations instead of dates.

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  • Javascript Replace Child/Loop issue

    - by Charles John Thompson III
    I have this really bizarre issue where I have a forloop that is supposed to replace all divs with the class of "original" to text inputs with a class of "new". When I run the loop, it only replaces every-other div with an input, but if I run the loop to just replace the class of the div and not change the tag to input, it does every single div, and doesn't only do every-other. Here is my loop code, and a link to the live version: live version here function divChange() { var divs = document.getElementsByTagName("div"); for (var i=0; i<divs.length; i++) { if (divs[i].className == 'original') { var textInput = document.createElement('input'); textInput.className = 'new'; textInput.type = 'text'; textInput.value = divs[i].innerHTML; var parent = divs[i].parentNode; parent.replaceChild(textInput, divs[i]); } } }

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  • Centered DIV w/ width dependant on text, buffered by two divs that should fill the containing DIV

    - by Andrew Thompson
    I have been wracking my brains on this seemingly small issue the whole day. My web dev friends are baffled and I could not find a suitable answer in my search of this site and others (though, I could have missed it somewhere along the way). Here's the problem: 3 DIVS within one fixed-width container DIV The center DIV has text that will be different on other sites The center DIV needs to be centered, and no larger than the text it contains. This is what I'd like to end up with The basic HTMl: <div id="container" > <div id="left" ></div> <div id="center" >Text inside center should resize this block</div> <div id="right" ></div> </div> Below, I removed most of the styles I have tried. This CSS currently centers the DIV (if I set it as an inline block), but I need the other divs to fill the left and right space remaining: #container { width:750px; text-align:center; } #left { background-color:#E85355; } #center { background-color:#CDD7D7; display:inline-block; } #right { background-color:#65A8A6; } I've tried floating, no-wrap, overflow, etc. Thanks a million to whomever can offer some help! JSFiddle Link

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