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  • improve my python program to fetch the desire rows by using if condition

    - by user2560507
    unique.txt file contains: 2 columns with columns separated by tab. total.txt file contains: 3 columns each column separated by tab. I take each row from unique.txt file and find that in total.txt file. If present then extract entire row from total.txt and save it in new output file. ###Total.txt column a column b column c interaction1 mitochondria_205000_225000 mitochondria_195000_215000 interaction2 mitochondria_345000_365000 mitochondria_335000_355000 interaction3 mitochondria_345000_365000 mitochondria_5000_25000 interaction4 chloroplast_115000_128207 chloroplast_35000_55000 interaction5 chloroplast_115000_128207 chloroplast_15000_35000 interaction15 2_10515000_10535000 2_10505000_10525000 ###Unique.txt column a column b mitochondria_205000_225000 mitochondria_195000_215000 mitochondria_345000_365000 mitochondria_335000_355000 mitochondria_345000_365000 mitochondria_5000_25000 chloroplast_115000_128207 chloroplast_35000_55000 chloroplast_115000_128207 chloroplast_15000_35000 mitochondria_185000_205000 mitochondria_25000_45000 2_16595000_16615000 2_16585000_16605000 4_2785000_2805000 4_2775000_2795000 4_11395000_11415000 4_11385000_11405000 4_2875000_2895000 4_2865000_2885000 4_13745000_13765000 4_13735000_13755000 My program: file=open('total.txt') file2 = open('unique.txt') all_content=file.readlines() all_content2=file2.readlines() store_id_lines = [] ff = open('match.dat', 'w') for i in range(len(all_content)): line=all_content[i].split('\t') seq=line[1]+'\t'+line[2] for j in range(len(all_content2)): if all_content2[j]==seq: ff.write(seq) break Problem: but istide of giving desire output (values of those 1st column that fulfile the if condition). i nead somthing like if jth of unique.txt == ith of total.txt then write ith row of total.txt into new file.

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  • add extra data to response object to render in template

    - by mp0int
    I ned to write a code sniplet that enables to disable connection to some parts of a site. Admin and the mainpage will be displayable, but user section (which uses ajax) will be displayed, but can not be used (vith a transparent div set over the page). Also there is a few pages which will be disabled. my logic is that, i write a middleware, def process_request(self, request): if ayar.tonline_kapali: url_parcalari = request.path.split('/') if url_parcalari[0] not in settings.BAGIMSIZ_URLLER: if not request.is_ajax(): return render_to_response('bakim_modu.html') else: return None that code let me to display a "site closed" message for the urls not in BAGIMSIZ_URLLER (which contains urls that will be accessible) But i do not figure out how can i solve the problem about ajax pages... i need to set a header or something to the response and need to check it in the template.

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  • sqlite3.OperationalError: database is locked - non-threaded application

    - by James C
    Hi, I have a Python application which throws the standard sqlite3.OperationalError: database is locked error. I have looked around the internet and could not find any solution which worked (please note that there is no multiprocesses/threading going on, and as you can see I have tried raising the timeout parameter). The sqlite file is stored on the local hard drive. The following function is one of many which accesses the sqlite database, and runs fine the first time it is called, but throws the above error the second time it is called (it is called as part of a for loop in another function): def update_index(filepath): path = get_setting('Local', 'web') stat = os.stat(filepath) modified = stat.st_mtime index_file = get_setting('Local', 'index') connection = sqlite3.connect(index_file, 30) cursor = connection.cursor() head, tail = os.path.split(filepath) cursor.execute('UPDATE hwlive SET date=? WHERE path=? AND name=?;', (modified, head, tail)) connection.commit() connection.close() Many thanks.

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  • PHP's preg_split question

    - by WekiLol
    I want to split text by the letter-followed-by-period rule. So I do this: $text = 'One two. Three test. And yet another one'; $splitted_text = preg_split("/\w\./", $text); print_r($splitted_text); Then I get this: Array ( [0] => One tw [1] => Three tes [2] => And yet another one ) But I do need it to be like this: Array ( [0] => One two [1] => Three test [2] => And yet another one ) How to settle the matter?

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  • Custom constructors for models in Google App Engine (python)

    - by Nikhil Chelliah
    I'm getting back to programming for Google App Engine and I've found, in old, unused code, instances in which I wrote constructors for models. It seems like a good idea, but there's no mention of it online and I can't test to see if it works. Here's a contrived example, with no error-checking, etc.: class Dog(db.Model): name = db.StringProperty(required=True) breeds = db.StringListProperty() age = db.IntegerProperty(default=0) def __init__(self, name, breed_list, **kwargs): db.Model.__init__(**kwargs) self.name = name self.breeds = breed_list.split() rufus = Dog('Rufus', 'spaniel terrier labrador') rufus.put() The **kwargs are passed on to the Model constructor in case the model is constructed with a specified parent or key_name, or in case other properties (like age) are specified. This constructor differs from the default in that it requires that a name and breed_list be specified (although it can't ensure that they're strings), and it parses breed_list in a way that the default constructor could not. Is this a legitimate form of instantiation, or should I just use functions or static/class methods? And if it works, why aren't custom constructors used more often?

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  • Redmine & Git integration

    - by archnemesis
    I am considering moving from svn and Trac to git and Redmine. I'm just wondering what everyone's experience is of this. How well does git integrate with Redmine? I'm pretty set on my decision to change from svn to git - our distributed work, and need to frequently branch and merge would make life considerably easier with git. But we would possibly need to split things into multiple projects for this. From what I have been reading, git and multiple projects don't integrate too smoothly with Trac. That aside, in my investigations into git, Redmine has also caught my attention, and some of the features look very useful. However, I haven't found as many user experiences of git and Redmine as what I'd like (possibly due to my lack of searching skills...) and so would like to hear your opinions and examples.

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  • Multiple sections on landing page only

    - by RDRAO
    Hi every one, I am very much new to Drupal but am loving it to start with. I got struck at a point with respect to theaming. I have a region called 'footer-teaser' just above footer. Its width is 800px. its been split into 3 equal size columns. Each column has the following. Image of size 120x120 Some teaser text Link to 'read more' The design requirement is all the above should be editable by the admin from the admin interface. If its static i would have hardcoded this but since the requirement is dynamic, i am not aware of how to achieve this. I have customised page.tpl for other sections of the page except this. I am sure someone else would have faced this issue before and was wondering if anyone can direct me in the right direction? Even better if an example is provided. Cheers RD

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  • Java Applet - ArrayIndexOutOfBoundsException

    - by Dan
    OK so I am getting an ArrayIndexOutofBoundsException. I don't know why. Here's my code: http://www.so.pastebin.com/y5MjD1k3 The thing is when I go to the red brick at board[2][2]... I go there. Then I go up... then I TRY go to back down but that error pops up. Also when I go to the right 8 squares... I ALSO get that error. ALSO, pretend my 2d map is split into FOUR squares... well square one is the top left... if I go ANYWHERE else ... I get that error. What am I doing wrong? Thanks.

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  • jquery validation plugin - different treatment for display errors vs. clearing errors

    - by RyOnLife
    I am using the popular jQuery Validation Plugin. It's very flexible with regards to when validations are run (onsubmit, onfocusout, onkeyup, etc.). When validations do run, as appropriate, errors are both displayed and cleared. Without hacking the plugin core, I'd like a way to split the behavior so: Errors are only displayed onsubmit But if the user subsequently enters a valid response, errors are cleared onsubmit, onfocusout, etc. Just trying to create a better user experience: Only yell at them when they submit, yet still get the errors out of their face as soon as possible. When I ran through the options, I didn't see the callbacks necessary to accomplish this. I'd like to make it work without having to hack the plugin core. Anyone have some insights? Thanks.

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  • Condor job using DAG with some jobs needing to run the same host

    - by gurney alex
    I have a computation task which is split in several individual program executions, with dependencies. I'm using Condor 7 as task scheduler (with the Vanilla Universe, due do constraints on the programs beyond my reach, so no checkpointing is involved), so DAG looks like a natural solution. However some of the programs need to run on the same host. I could not find a reference on how to do this in the Condor manuals. Example DAG file: JOB A A.condor JOB B B.condor JOB C C.condor JOB D D.condor PARENT A CHILD B C PARENT B C CHILD D I need to express that B and D need to be run on the same computer node, without breaking the parallel execution of B and C. Thanks for your help.

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  • Merging contents of two lists based on a if-loop

    - by chavanak
    I have a minor problem while checking for elements in a list: I have two files with contents something like this file 1: file2: 47 358 47 48 450 49 49 56 50 I parsed both files into two lists and used the following code to check for i in file_1: for j in file_2: j = j.split() if i == j[1]: x=' '.join(j) I am now trying to get a "0" if the value of file_1 is not there in file_2 for example, value "48" is not there is file_2 so I need to get the output like (with only one space in between the two numbers): output_file: 358 47 0 48 450 49 56 50 I tried using the dictionary approach but I didn't quite get what I wanted (actually I don't know how to use dictionary in python correctly ;)). Any help will be great.

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  • Finding if a sentence contains a specific phrase in Ruby

    - by TenJack
    Right now I am seeing if a sentence contains a specific word by splitting the sentence into an array and then doing an include to see if it contains the word. Something like: "This is my awesome sentence.".split(" ").include?('awesome') But I'm wondering what the fastest way to do this with a phrase is. Like if I wanted to see if the sentence "This is my awesome sentence." contains the phrase "my awesome sentence". I am scraping sentences and comparing a very large number of phrases, so speed is somewhat important.

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  • Why is JSON outputting out of order?

    - by dcp3450
    I'm am trying to get a list of weather information for 8 locations. I'm using a weather API that accepts longitude and latitude and spits back json output with the weather info for that location. I feed the coords in order 0-7 but when json processes the data it comes back in a seemingly random order. I assume it's because some process faster than others and json is outputing what it gets back as it gets it. The output is correct, only the order is wrong. var loc = null; var body = ""; var campuses = new Array(8); campuses[0] = "34.47242,-84.42489,1"; campuses[1] = "33.81488,-84.62048,2"; campuses[2] = "34.27502,-84.46976,3"; campuses[3] = "33.92987,-84.55065,4"; campuses[4] = "34.03433,-84.46723,5"; campuses[5] = "34.08362,-84.67115,6"; campuses[6] = "33.91124,-84.82634,7"; campuses[7] = "34.10409,-84.51804,8"; function getWeather(campusArray) { body += '<p class="topTitle">Campus Weather</p>'; var cSplit = new Array(); cSplit = campusArray.split(','); var loc = "http://www.worldweatheronline.com/feed/weather.ashx?q="+cSplit[0]+","+cSplit[1]+"&format=json&num_of_days=2&key=0a05fff921162948110401&callback=?"; $('#content').html('asdf'); $.getJSON(loc,function(js) { var data = js.data; var humidity = data.current_condition[0].humidity; var tempF = data.current_condition[0].temp_F; var iconDESC = data.current_condition[0].weatherDesc[0].value; var iconURL = data.current_condition[0].weatherIconUrl[0].value; var windDir = data.current_condition[0].winddir16Point; var windSpeed = data.current_condition[0].windspeedMiles; var tempMaxF = data.weather[0].tempMaxF; var tempMinF = data.weather[0].tempMinF; body += '<p class="title">'+cSplit[2]+'</p>'+ '<span class="body">'+tempF+ ' '+windSpeed+ '<img src="'+iconURL+'" /></span>'; $('#content').html(body); }); } getWeather(campuses[0]); getWeather(campuses[1]); getWeather(campuses[2]); getWeather(campuses[3]); getWeather(campuses[4]); getWeather(campuses[5]); getWeather(campuses[6]); getWeather(campuses[7]); I have also tried it as $.ajax var loc = null; var body = ""; var campuses = new Array(8); campuses[0] = "34.47242,-84.42489,1"; campuses[1] = "33.81488,-84.62048,2"; campuses[2] = "34.27502,-84.46976,3"; campuses[3] = "33.92987,-84.55065,4"; campuses[4] = "34.03433,-84.46723,5"; campuses[5] = "34.08362,-84.67115,6"; campuses[6] = "33.91124,-84.82634,7"; campuses[7] = "34.10409,-84.51804,8"; function getWeather(campusArray) { body += '<p class="topTitle">Campus Weather</p>'; var cSplit = new Array(); cSplit = campusArray.split(','); var loc = "http://www.worldweatheronline.com/feed/weather.ashx?q="+cSplit[0]+","+cSplit[1]+"&format=json&num_of_days=2&key=0a05fff921162948110401&callback=?"; $.ajax({ url: loc, async: true, dataType: "json", success: function(js) { var data = js.data; var humidity = data.current_condition[0].humidity; var tempF = data.current_condition[0].temp_F; var iconDESC = data.current_condition[0].weatherDesc[0].value; var iconURL = data.current_condition[0].weatherIconUrl[0].value; var windDir = data.current_condition[0].winddir16Point; var windSpeed = data.current_condition[0].windspeedMiles; var tempMaxF = data.weather[0].tempMaxF; var tempMinF = data.weather[0].tempMinF; body += '<p class="title">'+cSplit[2]+'</p>'+ '<span class="body">'+tempF+ ' '+windSpeed+ '<img src="'+iconURL+'" /></span>'; $('#content').html(body); } }); } getWeather(campuses[0]); getWeather(campuses[1]); getWeather(campuses[2]); getWeather(campuses[3]); getWeather(campuses[4]); getWeather(campuses[5]); getWeather(campuses[6]); getWeather(campuses[7]); EDIT: example of json output: { "data": { "current_condition": [ {"cloudcover": "100", "humidity": "93", "observation_time": "04:04 PM", "precipMM": "0.0", "pressure": "1009", "temp_C": "2", "temp_F": "36", "visibility": "8", "weatherCode": "116", "weatherDesc": [ {"value": "Mist" } ], "weatherIconUrl": [ {"value": "http:\/\/www.worldweatheronline.com\/images\/wsymbols01_png_64\/wsymbol_0006_mist.png" } ], "winddir16Point": "WNW", "winddirDegree": "290", "windspeedKmph": "7", "windspeedMiles": "4" } ], "request": [ {"query": "Lat 34.47 and Lon -84.42", "type": "LatLon" } ], "weather": [ {"date": "2011-01-06", "precipMM": "9.3", "tempMaxC": "7", "tempMaxF": "45", "tempMinC": "2", "tempMinF": "35", "weatherCode": "113", "weatherDesc": [ {"value": "Sunny" } ], "weatherIconUrl": [ {"value": "http:\/\/www.worldweatheronline.com\/images\/wsymbols01_png_64\/wsymbol_0001_sunny.png" } ], "winddir16Point": "WNW", "winddirDegree": "293", "winddirection": "WNW", "windspeedKmph": "20", "windspeedMiles": "13" }, {"date": "2011-01-07", "precipMM": "0.0", "tempMaxC": "6", "tempMaxF": "44", "tempMinC": "0", "tempMinF": "31", "weatherCode": "116", "weatherDesc": [ {"value": "Partly Cloudy" } ], "weatherIconUrl": [ {"value": "http:\/\/www.worldweatheronline.com\/images\/wsymbols01_png_64\/wsymbol_0002_sunny_intervals.png" } ], "winddir16Point": "WNW", "winddirDegree": "286", "winddirection": "WNW", "windspeedKmph": "25", "windspeedMiles": "16" } ] }}

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  • Java BufferedReader behavior in CSV vs TXT file

    - by Gabriel
    If i try to read a CSV file called csv_file.csv. The problem is that when i read lines with BufferedReader.readLine() it skips the first line with months. But when i rename the file to csv_file.txt it reads it allright and it's not skipping the first line. Is there an undocumented "feature" of BufferedReader that i'm not aware? Example of file: Months, SEP2010, OCT2010, NOV2010 col1, col2, col3, col4, col5 aaa,,sdf,"12,456",bla bla bla, xsaffadfafda and so on, and so on, "10,00", xxx, xxx The code: FileInputStream stream = new FileInputStream(UploadSupport.TEMPORARY_FILES_PATH+fileName); BufferedReader br = new BufferedReader(new InputStreamReader(stream, "UTF-8")); String line = br.readLine(); String months[] = line.split(","); while ((line=br.readLine())!=null) { /*parse other lines*/ }

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  • mysql varchar innodb page size limit 8100 bytes

    - by David19801
    Hi, Regarding innodb, someone recently told me: "the varchar content beyond 768 bytes is stored in supplemental 16K pages" This is very interesting. If each varchar will be latin1, which I believe stores as 1byte per letter, would a single varchar(500) (<768 bytes) require an extra i/o as a varchar(1000) (768 bytes) would?? (this question is to find out if all varchars or just big varchars are split into a separate page) Is the 768 limit per varchar or for all varchars in the row added together? (for example, does this get optimized - varchar(300), varchar(300), varchar(300): [where each individual varchar column is below 768 but together they are above 768 characters]? I am confused about if the 768 limit relates to each individual varchar or all varchars in the row totaled (as in the question). Any clarification? EDIT: Removed part about CHARS due to finding out about their limit of 255 max.

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  • Error message in XSLT with C# extension function

    - by iHeartGreek
    Hi! I am received the following error while trying to implement a C# extension function in XSLT. Extension function parameters or return values which have CLR type 'Char[]' are not supported.** code: <xsl:variable name="stringList"> <xsl:value-of select="extension:GetList('AAA BBB CCC', ' ')"/> </xsl:variable> <msxsl:script language="C#" implements-prefix="extension"> <![CDATA[ public string[] GetList(string str, char[] delimiter) { ... ... return str.Split(delimiter, StringSplitOptions.None); } ]]> </msxsl:script> Can someone explain this error message and how to get past it? Thanks!

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  • Trim email list into domain list

    - by hanjaya
    The function below is part of a script to trim email list from a file into domain list and removes duplicates. /* define a function that can accept a list of email addresses */ function getUniqueDomains($list) { // iterate over list, split addresses and add domain part to another array $domains = array(); foreach ($list as $l) { $arr = explode("@", $l); $domains[] = trim($arr[1]); } // remove duplicates and return return array_unique($domains); } What does $domains[] = trim($arr[1]); mean? Specifically the $arr[1]. What does [1] mean in this context? How come variable $arr becomes an array variable?

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  • Regular Expression to match unlimited number of options

    - by Pekka
    I want to be able to parse file paths like this one: /var/www/index.(htm|html|php|shtml) into an ordered array: array("htm", "html", "php", "shtml") and then produce a list of alternatives: /var/www/index.htm /var/www/index.html /var/www/index.php /var/www/index.shtml Right now, I have a preg_match statement that can split two alternatives: preg_match_all ("/\(([^)]*)\|([^)]*)\)/", $path_resource, $matches); Could somebody give me a pointer how to extend this to accept an unlimited number of alternatives (at least two)? Just regarding the regular expression, the rest I can deal with. The rule is: The list needs to start with a ( and close with a ) There must be one | in the list (i.e. at least two alternatives) Any other occurrence(s) of ( or ) are to remain untouched.

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  • How can I resolve naming conflict in given precompiled libraries?

    - by asm
    I'm linking two different libraries that have functions with exactly same name (it's opengl32.lib and libgles_cm.lib - OpenGL ES emulation under Win32 platform), and I want to be able to specify, which version I'm calling. I'm porting a game to OpenGL ES, and what I want to achieve, is a split-screen rendering, where left side is an OpenGL version, and right side is a ES version. To produce the same result, they will recieve slightly different calls, and I'll be able to visually compare them, effectively finding visual artifacts. It worked perfectly with OpenGL/DirectX at the same window, but now the problem is that both versions imports the functions with the same name, like glDrawArrays, and only one version is imported. Unfortunately, I don't have sources of any of that libraries. Is there a way to... I dont' know, wrap one library into additional namespace before linking (with calls like ES::glDrawArrays), somehow rename some of functions or do anything else? I'm using microsoft compiler now, but if there will be solution with another one (GCC/ICC), I'll switch to it.

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  • Rails: textfield list to array of strings

    - by poseid
    I want to take input from a textfield and turn it into an array of strings. After having submitted the "post", I want to display again the textfield, but with the array showed below. I have a view that would look like: <% form_tag "/list2array" do -%> <%= text_area_tag "mylist" %> <div><%= submit_tag 'save' %></div> <% end -%> <% @myArray.each do |item| %> <%= item %> <% end %> And as a start for the controller: class List2ArrayController < ApplicationController def index end def save @myArray = params[:mylist].split("\r\n") end end However, after the post, I only get an empty textfield without values in the array from the previous POST. Do I need to use the model layer for my experiment? How? Or do I need to modify my controller?

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  • Help me write a nicer SQL query in Rails

    - by Sainath Mallidi
    Hi, I am trying to write an SQL query to update some of the attributes that are regularly pulled from source. the output will be a text file with the following fields: author, title, date, popularity I have two tables to update one is the author information and the other is popularity table. And the Author Active Record object has one popularity. Currently I'm doing it like this.\ arr.each { |x| x = x.split(" ") results = Author.find_by_sql("SELECT authors.id FROM authors, priorities WHERE authors.id=popularity.authors_id AND authors.author = x[0]") results[0].popularity.update_attribute("popularity", x[3]) I need two tables because the popularity keeps changing, and I need only the top 1000 popular ones, but I still need to keep the previously popular ones also. Is there any nicer way to do this, instead of one query for every new object. Thanks.

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  • Why are my \n not working in PHP?

    - by Doug
    I'm playing with SAX and noticed it's not line breaking properly. I have no iea why. function flush_data() { global $level, $char_data; $char_data = trim($char_data); if( strlen( $char_data ) > 0 ) { print "\n"; $data = split("\n", wordwrap($char_data, 76 - ($level*2))); foreach($data as $line) { print str_repeat(' ', ($level +1)) . "[".$line."]"."\n"; } } $char_data = ''; }

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  • Variable loss in redirected bash while loop

    - by James Hadley
    I have the following code for ip in $(ifconfig | awk -F ":" '/inet addr/{split($2,a," ");print a[1]}') do bytesin=0; bytesout=0; while read line do if [[ $(echo ${line} | awk '{print $1}') == ${ip} ]] then increment=$(echo ${line} | awk '{print $4}') bytesout=$((${bytesout} + ${increment})) else increment=$(echo ${line} | awk '{print $4}') bytesin=$((${bytesin} + ${increment})) fi done < <(pmacct -s | grep ${ip}) echo "${ip} ${bytesin} ${bytesout}" >> /tmp/bwacct.txt done Which I would like to print the incremented values to bwacct.txt, but instead the file is full of zeroes: 91.227.223.66 0 0 91.227.221.126 0 0 127.0.0.1 0 0 My understanding of Bash is that a redirected for loop should preserve variables. What am I doing wrong?

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  • Strange result of highchart

    - by user1612334
    I use http://highcharts.com and there is really strange result. So, my data looks like: Value | Date 1507 2013-02-03 734 2013-02-02 0 2013-02-01 225 2013-01-31 *Graphic miss* 672 2013-01-30 *Graphic miss* 692 2013-01-29 *Graphic miss* <--- This value gone to 1 february 910 2013-01-28 314 2013-01-27 I miss three days (29 January, 30, 31). When i get data from database, i convert it so: var lines = []; try { jQuery.each(data, function(i, line) { var dateArr = line.date.split('-'); lines.push([ Date.UTC(dateArr[0],dateArr[1],dateArr[2]), parseInt(line.num_chips) ]); }); } catch(e) { } Why could it be so? =\

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  • A simple string array Iteration in C# .NET doesn't work

    - by met.lord
    This is a simple code that should return true or false after comparing each element in a String array with a Session Variable. The thing is that even when the string array named 'plans' gets the right attributes, inside the foreach it keeps iterating only over the first element, so if the Session Variable matches other element different than the first one in the array it never returns true... You could say the problem is right there in the foreach cicle, but I cant see it... I've done this like a hundred times and I can't understand what am I doing wrong... Thank you protected bool ValidatePlans() { bool authorized = false; if (RequiredPlans.Length > 0) { string[] plans = RequiredPlans.Split(','); foreach (string plan in plans) { if (MySessionInfo.Plan == plan) authorized = true; } } return authorized; }

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