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• Error while opening the Eclipse Android Layout Editor

  - by Janusz

  Since yesterday everytime I open my layout Editor in Eclipse for the Android UI I get the following exception: Unhandled event loop exception java.lang.StackOverflowError at com.android.ide.eclipse.adt.internal.editors.layout.configuration.ConfigurationComposite.isTheme(Unknown Source) at com.android.ide.eclipse.adt.internal.editors.layout.configuration.ConfigurationComposite.isTheme(Unknown Source) at... the last part goes on and on as expected if an Stackoverflow Exception occurs. Anybody else experiencing this and found a solution? I'm working with the latests android sdk on Mac OS X with Eclipse 3.5.2

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• Using PInvoke vs .NET provided functions

  - by Jonathan Shepherd

  From version to version of .NET the more function that's equal to P/Invoke is added to .NET Now there are 2 questions in my mine. 1) Which one is prefer other the other in term of speed, normally I use .Net function but in tight loop I don't really know which one is going to be faster. 2) Is there any website that provide the list of counter-parts?

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• How to express loops in Communication Diagrams?

  - by devoured elysium

  I'd like to know how to express in a Communication Diagram something like: foreach (User user in UsersCatalog) { list.add(user.getId()); } I actually have something like the following (Utilizador = User) but as you'll notice it does not represent well the fact that I am doing something like a loop. How can I accomplish this?

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• How to sort an NSMutableArray List of objects in alphabetical order.

  - by Madan Mohan

  Hi guys, I have an object with different values that is name,nameid, lifebeging,lifeEndiging .... etc, for loop { Search *Obj=[artistslist objectAtIndex:i];// here i will get name, ids, other value for each objcet } 0 obj.name= //string values1 get from parser 1 obj.name= //string values1 2 obj.name= //string values1 3 obj.name= //string values1 4 obj.name= //string values1 I am getting values in the artistList then i need to sort only by name not other feilds when i use this below statement [artistsList sortUsingSelector:@selector(NSOrderedAscending:)]; i am getting exception here ,it is not working.

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• HLSL, Program pixel shader with different Texture2D downscaling algorithms

  - by Kaminari

  I'm trying to port some image interpolation algorithms into HLSL code, for now i got: float2 texSize; float scale; int method; sampler TextureSampler : register(s0); float4 PixelShader(float4 color : COLOR0, float2 texCoord : TEXCOORD0) : COLOR0 { float2 newTexSize = texSize * scale; float4 tex2; if(texCoord[0] * texSize[0] > newTexSize[0] || texCoord[1] * texSize[1] > newTexSize[1]) { tex2 = float4( 0, 0, 0, 0 ); } else { if (method == 0) { tex2 = tex2D(TextureSampler, float2(texCoord[0]/scale, texCoord[1]/scale)); } else { float2 step = float2(1/texSize[0], 1/texSize[1]); float4 px1 = tex2D(TextureSampler, float2(texCoord[0]/scale-step[0], texCoord[1]/scale-step[1])); float4 px2 = tex2D(TextureSampler, float2(texCoord[0]/scale , texCoord[1]/scale-step[1])); float4 px3 = tex2D(TextureSampler, float2(texCoord[0]/scale+step[0], texCoord[1]/scale-step[1])); float4 px4 = tex2D(TextureSampler, float2(texCoord[0]/scale-step[0], texCoord[1]/scale )); float4 px5 = tex2D(TextureSampler, float2(texCoord[0]/scale+step[0], texCoord[1]/scale )); float4 px6 = tex2D(TextureSampler, float2(texCoord[0]/scale-step[0], texCoord[1]/scale+step[1])); float4 px7 = tex2D(TextureSampler, float2(texCoord[0]/scale , texCoord[1]/scale+step[1])); float4 px8 = tex2D(TextureSampler, float2(texCoord[0]/scale+step[0], texCoord[1]/scale+step[1])); tex2 = (px1+px2+px3+px4+px5+px6+px7+px8)/8; tex2.a = 1; } } return tex2; } technique Resample { pass Pass1 { PixelShader = compile ps_2_0 PixelShader(); } } The problem is that programming pixel shader requires different approach because we don't have the control of current position, only the 'inner' part of actual loop through pixels. I've been googling for about whole day and found none open source library with scaling algoriths used in loop. Is there such library from wich i could port some methods? I found http://www.codeproject.com/KB/GDI-plus/imgresizoutperfgdiplus.aspx but I really don't understand His approach to the problem, and porting it will be a pain in the ... Wikipedia tells a matematic approach. So my question is: Where can I find easy-to-port graphic open source library wich includes simple scaling algorithms? Of course if such library even exists :)

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• Cisco 891w multiple VLAN configuration

  - by Jessica

  I'm having trouble getting my guest network up. I have VLAN 1 that contains all our network resources (servers, desktops, printers, etc). I have the wireless configured to use VLAN1 but authenticate with wpa2 enterprise. The guest network I just wanted to be open or configured with a simple WPA2 personal password on it's own VLAN2. I've looked at tons of documentation and it should be working but I can't even authenticate on the guest network! I've posted this on cisco's support forum a week ago but no one has really responded. I could really use some help. So if anyone could take a look at the configurations I posted and steer me in the right direction I would be extremely grateful. Thank you! version 15.0 service timestamps debug datetime msec service timestamps log datetime msec no service password-encryption ! hostname ESI ! boot-start-marker boot-end-marker ! logging buffered 51200 warnings ! aaa new-model ! ! aaa authentication login userauthen local aaa authorization network groupauthor local ! ! ! ! ! aaa session-id common ! ! ! clock timezone EST -5 clock summer-time EDT recurring service-module wlan-ap 0 bootimage autonomous ! crypto pki trustpoint TP-self-signed-3369945891 enrollment selfsigned subject-name cn=IOS-Self-Signed-Certificate-3369945891 revocation-check none rsakeypair TP-self-signed-3369945891 ! ! crypto pki certificate chain TP-self-signed-3369945891 certificate self-signed 01 (cert is here) quit ip source-route ! ! ip dhcp excluded-address 192.168.1.1 ip dhcp excluded-address 192.168.1.5 ip dhcp excluded-address 192.168.1.2 ip dhcp excluded-address 192.168.1.200 192.168.1.210 ip dhcp excluded-address 192.168.1.6 ip dhcp excluded-address 192.168.1.8 ip dhcp excluded-address 192.168.3.1 ! ip dhcp pool ccp-pool import all network 192.168.1.0 255.255.255.0 default-router 192.168.1.1 dns-server 10.171.12.5 10.171.12.37 lease 0 2 ! ip dhcp pool guest import all network 192.168.3.0 255.255.255.0 default-router 192.168.3.1 dns-server 10.171.12.5 10.171.12.37 ! ! ip cef no ip domain lookup no ipv6 cef ! ! multilink bundle-name authenticated license udi pid CISCO891W-AGN-A-K9 sn FTX153085WL ! ! username ESIadmin privilege 15 secret 5 $1$g1..$JSZ0qxljZAgJJIk/anDu51 username user1 password 0 pass ! ! ! class-map type inspect match-any ccp-cls-insp-traffic match protocol cuseeme match protocol dns match protocol ftp match protocol h323 match protocol https match protocol icmp match protocol imap match protocol pop3 match protocol netshow match protocol shell match protocol realmedia match protocol rtsp match protocol smtp match protocol sql-net match protocol streamworks match protocol tftp match protocol vdolive match protocol tcp match protocol udp class-map type inspect match-all ccp-insp-traffic match class-map ccp-cls-insp-traffic class-map type inspect match-any ccp-cls-icmp-access match protocol icmp class-map type inspect match-all ccp-invalid-src match access-group 100 class-map type inspect match-all ccp-icmp-access match class-map ccp-cls-icmp-access class-map type inspect match-all ccp-protocol-http match protocol http ! ! policy-map type inspect ccp-permit-icmpreply class type inspect ccp-icmp-access inspect class class-default pass policy-map type inspect ccp-inspect class type inspect ccp-invalid-src drop log class type inspect ccp-protocol-http inspect class type inspect ccp-insp-traffic inspect class class-default drop policy-map type inspect ccp-permit class class-default drop ! zone security out-zone zone security in-zone zone-pair security ccp-zp-self-out source self destination out-zone service-policy type inspect ccp-permit-icmpreply zone-pair security ccp-zp-in-out source in-zone destination out-zone service-policy type inspect ccp-inspect zone-pair security ccp-zp-out-self source out-zone destination self service-policy type inspect ccp-permit ! ! crypto isakmp policy 1 encr 3des authentication pre-share group 2 ! crypto isakmp client configuration group 3000client key 67Nif8LLmqP_ dns 10.171.12.37 10.171.12.5 pool dynpool acl 101 ! ! crypto ipsec transform-set myset esp-3des esp-sha-hmac ! crypto dynamic-map dynmap 10 set transform-set myset ! ! crypto map clientmap client authentication list userauthen crypto map clientmap isakmp authorization list groupauthor crypto map clientmap client configuration address initiate crypto map clientmap client configuration address respond crypto map clientmap 10 ipsec-isakmp dynamic dynmap ! ! ! ! ! interface FastEthernet0 ! ! interface FastEthernet1 ! ! interface FastEthernet2 ! ! interface FastEthernet3 ! ! interface FastEthernet4 ! ! interface FastEthernet5 ! ! interface FastEthernet6 ! ! interface FastEthernet7 ! ! interface FastEthernet8 ip address dhcp ip nat outside ip virtual-reassembly duplex auto speed auto ! ! interface GigabitEthernet0 description $FW_OUTSIDE$$ES_WAN$ ip address 10...* 255.255.254.0 ip nat outside ip virtual-reassembly zone-member security out-zone duplex auto speed auto crypto map clientmap ! ! interface wlan-ap0 description Service module interface to manage the embedded AP ip unnumbered Vlan1 arp timeout 0 ! ! interface Wlan-GigabitEthernet0 description Internal switch interface connecting to the embedded AP switchport trunk allowed vlan 1-3,1002-1005 switchport mode trunk ! ! interface Vlan1 description $ETH-SW-LAUNCH$$INTF-INFO-FE 1$$FW_INSIDE$ ip address 192.168.1.1 255.255.255.0 ip nat inside ip virtual-reassembly zone-member security in-zone ip tcp adjust-mss 1452 crypto map clientmap ! ! interface Vlan2 description guest ip address 192.168.3.1 255.255.255.0 ip access-group 120 in ip nat inside ip virtual-reassembly zone-member security in-zone ! ! interface Async1 no ip address encapsulation slip ! ! ip local pool dynpool 192.168.1.200 192.168.1.210 ip forward-protocol nd ip http server ip http access-class 23 ip http authentication local ip http secure-server ip http timeout-policy idle 60 life 86400 requests 10000 ! ! ip dns server ip nat inside source list 23 interface GigabitEthernet0 overload ip route 0.0.0.0 0.0.0.0 10.165.0.1 ! access-list 23 permit 192.168.1.0 0.0.0.255 access-list 100 remark CCP_ACL Category=128 access-list 100 permit ip host 255.255.255.255 any access-list 100 permit ip 127.0.0.0 0.255.255.255 any access-list 100 permit ip 10.165.0.0 0.0.1.255 any access-list 110 permit ip 192.168.0.0 0.0.5.255 any access-list 120 remark ESIGuest Restriction no cdp run ! ! ! ! ! ! control-plane ! ! alias exec dot11radio service-module wlan-ap 0 session Access point version 12.4 no service pad service timestamps debug datetime msec service timestamps log datetime msec no service password-encryption ! hostname ESIRouter ! no logging console enable secret 5 $1$yEH5$CxI5.9ypCBa6kXrUnSuvp1 ! aaa new-model ! ! aaa group server radius rad_eap server 192.168.1.5 auth-port 1812 acct-port 1813 ! aaa group server radius rad_acct server 192.168.1.5 auth-port 1812 acct-port 1813 ! aaa authentication login eap_methods group rad_eap aaa authentication enable default line enable aaa authorization exec default local aaa authorization commands 15 default local aaa accounting network acct_methods start-stop group rad_acct ! aaa session-id common clock timezone EST -5 clock summer-time EDT recurring ip domain name ESI ! ! dot11 syslog dot11 vlan-name one vlan 1 dot11 vlan-name two vlan 2 ! dot11 ssid one vlan 1 authentication open eap eap_methods authentication network-eap eap_methods authentication key-management wpa version 2 accounting rad_acct ! dot11 ssid two vlan 2 authentication open guest-mode ! dot11 network-map ! ! username ESIadmin privilege 15 secret 5 $1$p02C$WVHr5yKtRtQxuFxPU8NOx. ! ! bridge irb ! ! interface Dot11Radio0 no ip address no ip route-cache ! encryption vlan 1 mode ciphers aes-ccm ! broadcast-key vlan 1 change 30 ! ! ssid one ! ssid two ! antenna gain 0 station-role root ! interface Dot11Radio0.1 encapsulation dot1Q 1 native no ip route-cache bridge-group 1 bridge-group 1 subscriber-loop-control bridge-group 1 block-unknown-source no bridge-group 1 source-learning no bridge-group 1 unicast-flooding bridge-group 1 spanning-disabled ! interface Dot11Radio0.2 encapsulation dot1Q 2 no ip route-cache bridge-group 2 bridge-group 2 subscriber-loop-control bridge-group 2 block-unknown-source no bridge-group 2 source-learning no bridge-group 2 unicast-flooding bridge-group 2 spanning-disabled ! interface Dot11Radio1 no ip address no ip route-cache shutdown ! encryption vlan 1 mode ciphers aes-ccm ! broadcast-key vlan 1 change 30 ! ! ssid one ! antenna gain 0 dfs band 3 block channel dfs station-role root ! interface Dot11Radio1.1 encapsulation dot1Q 1 native no ip route-cache bridge-group 1 bridge-group 1 subscriber-loop-control bridge-group 1 block-unknown-source no bridge-group 1 source-learning no bridge-group 1 unicast-flooding bridge-group 1 spanning-disabled ! interface GigabitEthernet0 description the embedded AP GigabitEthernet 0 is an internal interface connecting AP with the host router no ip address no ip route-cache ! interface GigabitEthernet0.1 encapsulation dot1Q 1 native no ip route-cache bridge-group 1 no bridge-group 1 source-learning bridge-group 1 spanning-disabled ! interface GigabitEthernet0.2 encapsulation dot1Q 2 no ip route-cache bridge-group 2 no bridge-group 2 source-learning bridge-group 2 spanning-disabled ! interface BVI1 ip address 192.168.1.2 255.255.255.0 no ip route-cache ! ip http server no ip http secure-server ip http help-path http://www.cisco.com/warp/public/779/smbiz/prodconfig/help/eag access-list 10 permit 192.168.1.0 0.0.0.255 radius-server host 192.168.1.5 auth-port 1812 acct-port 1813 key ***** bridge 1 route ip

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• Why No android.content.SyncAdapter meta-data registering sync-adapter?

  - by mobibob

  I am following the SampleSyncAdapter and upon startup, it appears that my SyncAdapter is not configured correctly. It reports an error trying to load its meta-data. How can I isolate the problem? You can see the other accounts in the system that register correctly. Logcat: 12-21 17:10:50.667 W/PackageManager( 121): Unable to load service info ResolveInfo{4605dcd0 com.myapp.syncadapter.MySyncAdapter p=0 o=0 m=0x108000} 12-21 17:10:50.667 W/PackageManager( 121): org.xmlpull.v1.XmlPullParserException: No android.content.SyncAdapter meta-data 12-21 17:10:50.667 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache.parseServiceInfo(RegisteredServicesCache.java:391) 12-21 17:10:50.667 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache.generateServicesMap(RegisteredServicesCache.java:260) 12-21 17:10:50.667 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache$1.onReceive(RegisteredServicesCache.java:110) 12-21 17:10:50.667 W/PackageManager( 121): at android.app.ActivityThread$PackageInfo$ReceiverDispatcher$Args.run(ActivityThread.java:892) 12-21 17:10:50.667 W/PackageManager( 121): at android.os.Handler.handleCallback(Handler.java:587) 12-21 17:10:50.667 W/PackageManager( 121): at android.os.Handler.dispatchMessage(Handler.java:92) 12-21 17:10:50.667 W/PackageManager( 121): at android.os.Looper.loop(Looper.java:123) 12-21 17:10:50.667 W/PackageManager( 121): at com.android.server.ServerThread.run(SystemServer.java:570) 12-21 17:10:50.747 D/Sources ( 294): Creating external source for type=com.skype.contacts.sync, packageName=com.skype.raider 12-21 17:10:50.747 D/Sources ( 294): Creating external source for type=com.twitter.android.auth.login, packageName=com.twitter.android 12-21 17:10:50.747 D/Sources ( 294): Creating external source for type=com.example.android.samplesync, packageName=com.example.android.samplesync 12-21 17:10:50.747 W/PackageManager( 121): Unable to load service info ResolveInfo{460504b0 com.myapp.syncadapter.MySyncAdapter p=0 o=0 m=0x108000} 12-21 17:10:50.747 W/PackageManager( 121): org.xmlpull.v1.XmlPullParserException: No android.content.SyncAdapter meta-data 12-21 17:10:50.747 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache.parseServiceInfo(RegisteredServicesCache.java:391) 12-21 17:10:50.747 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache.generateServicesMap(RegisteredServicesCache.java:260) 12-21 17:10:50.747 W/PackageManager( 121): at android.content.pm.RegisteredServicesCache$1.onReceive(RegisteredServicesCache.java:110) 12-21 17:10:50.747 W/PackageManager( 121): at android.app.ActivityThread$PackageInfo$ReceiverDispatcher$Args.run(ActivityThread.java:892) 12-21 17:10:50.747 W/PackageManager( 121): at android.os.Handler.handleCallback(Handler.java:587) 12-21 17:10:50.747 W/PackageManager( 121): at android.os.Handler.dispatchMessage(Handler.java:92) 12-21 17:10:50.747 W/PackageManager( 121): at android.os.Looper.loop(Looper.java:123) 12-21 17:10:50.747 W/PackageManager( 121): at com.android.server.ServerThread.run(SystemServer.java:570)

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• recv with MSG_NONBLOCK and MSG_WAITALL

  - by osgx

  Hello I want to use recv syscall with nonblocking flags MSG_NONBLOCK. But with this flag syscall can return before full request is satisfied. So, can I add MSG_WAITALL flag? Will it be nonblocking? or how should I rewrite blocking recv into the loop with nonblocking recv

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• Many to Many Logic in ASP.NET MVC

  - by Jonathan Stowell

  Hi All, I will restrict this to the three tables I am trying to work with Problem, Communications, and ProbComms. The scenario is that a Student may have many Problems concurrently which may affect their studies. Lecturers may have future communications with a student after an initial problem is logged, however as a Student may have multiple Problems the Lecturer may decide that the discussion they had is related to more than one Problem. Here is a screenshot of the LINQ representation of my DB: LINQ Screenshot At the moment in my StudentController I have a StudentFormViewModel Class: // //ViewModel Class public class StudentFormViewModel { IProbCommRepository probCommRepository; // Properties public Student Student { get; private set; } public IEnumerable<ProbComm> ProbComm { get; private set; } // // Dependency Injection enabled constructors public StudentFormViewModel(Student student, IEnumerable<ProbComm> probComm) : this(new ProbCommRepository()) { this.Student = student; this.ProbComm = probComm; } public StudentFormViewModel(IProbCommRepository pRepository) { probCommRepository = pRepository; } } When I go to the Students Detail Page this runs: public ActionResult Details(string id) { StudentFormViewModel viewdata = new StudentFormViewModel(studentRepository.GetStudent(id), probCommRepository.FindAllProblemComms(id)); if (viewdata == null) return View("NotFound"); else return View(viewdata); } The GetStudent works fine and returns an instance of the student to output on the page, below the student I output all problems logged against them, but underneath these problems I want to show the communications related to the Problem. The LINQ I am using for ProbComms is This is located in the Model class ProbCommRepository, and accessed via a IProbCommRepository interface: public IQueryable<ProbComm> FindAllProblemComms(string studentEmail) { return (from p in db.ProbComms where p.Problem.StudentEmail.Equals(studentEmail) orderby p.Problem.ProblemDateTime select p); } However for example if I have this data in the ProbComms table: ProblemID CommunicationID 1 1 1 2 The query returns two rows so I assume I somehow have to groupby Problem or ProblemID but I am not too sure how to do this with the way I have built things as the return type has to be ProbComm for the query as thats what Model class its located in. When it comes to the view the Details.aspx calls two partial views each passing the relevant view data through, StudentDetails works fine page: <%@ Page Title="" Language="C#" MasterPageFile="~/Views/Shared/Site.Master" Inherits="System.Web.Mvc.ViewPage<MitigatingCircumstances.Controllers.StudentFormViewModel>" %> <% Html.RenderPartial("StudentDetails", this.ViewData.Model.Student); %> <% Html.RenderPartial("StudentProblems", this.ViewData.Model.ProbComm); %> StudentProblems uses a foreach loop to loop through records in the Model and I am trying another foreach loop to output the communication details: <%@ Control Language="C#" Inherits="System.Web.Mvc.ViewUserControl<IEnumerable<MitigatingCircumstances.Models.ProbComm>>" %> <script type="text/javascript" language="javascript"> $(document).ready(function() { $("DIV.ContainerPanel > DIV.collapsePanelHeader > DIV.ArrowExpand").toggle( function() { $(this).parent().next("div.Content").show("slow"); $(this).attr("class", "ArrowClose"); }, function() { $(this).parent().next("div.Content").hide("slow"); $(this).attr("class", "ArrowExpand"); }); }); </script> <div class="studentProblems"> <% var i = 0; foreach (var item in Model) { %> <div id="ContainerPanel<%= i = i + 1 %>" class="ContainerPanel"> <div id="header<%= i = i + 1 %>" class="collapsePanelHeader"> <div id="dvHeaderText<%= i = i + 1 %>" class="HeaderContent"><%= Html.Encode(String.Format("{0:dd/MM/yyyy}", item.Problem.ProblemDateTime))%></div> <div id="dvArrow<%= i = i + 1 %>" class="ArrowExpand"></div> </div> <div id="dvContent<%= i = i + 1 %>" class="Content" style="display: none"> <p> Type: <%= Html.Encode(item.Problem.CommunicationType.TypeName) %> </p> <p> Problem Outline: <%= Html.Encode(item.Problem.ProblemOutline)%> </p> <p> Mitigating Circumstance Form: <%= Html.Encode(item.Problem.MCF)%> </p> <p> Mitigating Circumstance Level: <%= Html.Encode(item.Problem.MitigatingCircumstanceLevel.MCLevel)%> </p> <p> Absent From: <%= Html.Encode(String.Format("{0:g}", item.Problem.AbsentFrom))%> </p> <p> Absent Until: <%= Html.Encode(String.Format("{0:g}", item.Problem.AbsentUntil))%> </p> <p> Requested Follow Up: <%= Html.Encode(String.Format("{0:g}", item.Problem.RequestedFollowUp))%> </p> <p>Problem Communications</p> <% foreach (var comm in Model) { %> <p> <% if (item.Problem.ProblemID == comm.ProblemID) { %> <%= Html.Encode(comm.ProblemCommunication.CommunicationOutline)%> <% } %> </p> <% } %> </div> </div> <br /> <% } %> </div> The issue is that using the example data before the Model has two records for the same problem as there are two communications for that problem, therefore duplicating the output. Any help with this would be gratefully appreciated. Thanks, Jon

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• Python - calculate multinomial probability density functions on large dataset?

  - by Seafoid

  Hi, I originally intended to use MATLAB to tackle this problem but the inbuilt functions has limitations that do not suit my goal. The same limitation occurs in NumPy. I have two tab-delimited files. The first is a file showing amino acid residue, frequency and count for an in-house database of protein structures, i.e. A 0.25 1 S 0.25 1 T 0.25 1 P 0.25 1 The second file consists of quadruplets of amino acids and the number of times they occur, i.e. ASTP 1 Note, there are 8,000 such quadruplets. Based on the background frequency of occurence of each amino acid and the count of quadruplets, I aim to calculate the multinomial probability density function for each quadruplet and subsequently use it as the expected value in a maximum likelihood calculation. The multinomial distribution is as follows: f(x|n, p) = n!/(x1!*x2!*...*xk!)*((p1^x1)*(p2^x2)*...*(pk^xk)) where x is the number of each of k outcomes in n trials with fixed probabilities p. n is 4 four in all cases in my calculation. I have created three functions to calculate this distribution. # functions for multinomial distribution def expected_quadruplets(x, y): expected = x*y return expected # calculates the probabilities of occurence raised to the number of occurrences def prod_prob(p1, a, p2, b, p3, c, p4, d): prob_prod = (pow(p1, a))*(pow(p2, b))*(pow(p3, c))*(pow(p4, d)) return prob_prod # factorial() and multinomial_coefficient() work in tandem to calculate C, the multinomial coefficient def factorial(n): if n <= 1: return 1 return n*factorial(n-1) def multinomial_coefficient(a, b, c, d): n = 24.0 multi_coeff = (n/(factorial(a) * factorial(b) * factorial(c) * factorial(d))) return multi_coeff The problem is how best to structure the data in order to tackle the calculation most efficiently, in a manner that I can read (you guys write some cryptic code :-)) and that will not create an overflow or runtime error. To data my data is represented as nested lists. amino_acids = [['A', '0.25', '1'], ['S', '0.25', '1'], ['T', '0.25', '1'], ['P', '0.25', '1']] quadruplets = [['ASTP', '1']] I initially intended calling these functions within a nested for loop but this resulted in runtime errors or overfloe errors. I know that I can reset the recursion limit but I would rather do this more elegantly. I had the following: for i in quadruplets: quad = i[0].split(' ') for j in amino_acids: for k in quadruplets: for v in k: if j[0] == v: multinomial_coefficient(int(j[2]), int(j[2]), int(j[2]), int(j[2])) I haven'te really gotten to how to incorporate the other functions yet. I think that my current nested list arrangement is sub optimal. I wish to compare the each letter within the string 'ASTP' with the first component of each sub list in amino_acids. Where a match exists, I wish to pass the appropriate numeric values to the functions using indices. Is their a better way? Can I append the appropriate numbers for each amino acid and quadruplet to a temporary data structure within a loop, pass this to the functions and clear it for the next iteration? Thanks, S :-)

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• Python performance: iteration and operations on nested lists

  - by J.J.

  Problem Hey folks. I'm looking for some advice on python performance. Some background on my problem: Given: A mesh of nodes of size (x,y) each with a value (0...255) starting at 0 A list of N input coordinates each at a specified location within the range (0...x, 0...y) Increment the value of the node at the input coordinate and the node's neighbors within range Z up to a maximum of 255. Neighbors beyond the mesh edge are ignored. (No wrapping) BASE CASE: A mesh of size 1024x1024 nodes, with 400 input coordinates and a range Z of 75 nodes. Processing should be O(x*y*Z*N). I expect x, y and Z to remain roughly around the values in the base case, but the number of input coordinates N could increase up to 100,000. My goal is to minimize processing time. Current results I have 2 current implementations: f1, f2 Running speed on my 2.26 GHz Intel Core 2 Duo with Python 2.6.1: f1: 2.9s f2: 1.8s f1 is the initial naive implementation: three nested for loops. f2 is replaces the inner for loop with a list comprehension. Code is included below for your perusal. Question How can I further reduce the processing time? I'd prefer sub-1.0s for the test parameters. Please, keep the recommendations to native Python. I know I can move to a third-party package such as numpy, but I'm trying to avoid any third party packages. Also, I've generated random input coordinates, and simplified the definition of the node value updates to keep our discussion simple. The specifics have to change slightly and are outside the scope of my question. thanks much! f1 is the initial naive implementation: three nested for loops. 2.9s def f1(x,y,n,z): rows = [] for i in range(x): rows.append([0 for i in xrange(y)]) for i in range(n): inputX, inputY = (int(x*random.random()), int(y*random.random())) topleft = (inputX - z, inputY - z) for i in xrange(max(0, topleft[0]), min(topleft[0]+(z*2), x)): for j in xrange(max(0, topleft[1]), min(topleft[1]+(z*2), y)): if rows[i][j] <= 255: rows[i][j] += 1 f2 is replaces the inner for loop with a list comprehension. 1.8s def f2(x,y,n,z): rows = [] for i in range(x): rows.append([0 for i in xrange(y)]) for i in range(n): inputX, inputY = (int(x*random.random()), int(y*random.random())) topleft = (inputX - z, inputY - z) for i in xrange(max(0, topleft[0]), min(topleft[0]+(z*2), x)): l = max(0, topleft[1]) r = min(topleft[1]+(z*2), y) rows[i][l:r] = [j+1 for j in rows[i][l:r] if j < 255]

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• Java - Lock Aspect Ratio of JFrame

  - by nasufara

  Is it possible to lock the aspect ratio of a JFrame in Java Swing? For example, if my window is 200px by 200px, and the user wants to resize it, I want the ratio between the width and the height at 1:1, so that if the new width is 400px, the new height is forced to 400px. I'm aware of ComponentListener and componentResized, but I'm having difficulty not getting it to go into an infinite loop of resizing, because I'm resizing the window in a resize listener. Thanks!

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• How to optimize my PageRank calculation?

  - by asmaier

  In the book Programming Collective Intelligence I found the following function to compute the PageRank: def calculatepagerank(self,iterations=20): # clear out the current PageRank tables self.con.execute("drop table if exists pagerank") self.con.execute("create table pagerank(urlid primary key,score)") self.con.execute("create index prankidx on pagerank(urlid)") # initialize every url with a PageRank of 1.0 self.con.execute("insert into pagerank select rowid,1.0 from urllist") self.dbcommit() for i in range(iterations): print "Iteration %d" % i for (urlid,) in self.con.execute("select rowid from urllist"): pr=0.15 # Loop through all the pages that link to this one for (linker,) in self.con.execute("select distinct fromid from link where toid=%d" % urlid): # Get the PageRank of the linker linkingpr=self.con.execute("select score from pagerank where urlid=%d" % linker).fetchone()[0] # Get the total number of links from the linker linkingcount=self.con.execute("select count(*) from link where fromid=%d" % linker).fetchone()[0] pr+=0.85*(linkingpr/linkingcount) self.con.execute("update pagerank set score=%f where urlid=%d" % (pr,urlid)) self.dbcommit() However, this function is very slow, because of all the SQL queries in every iteration >>> import cProfile >>> cProfile.run("crawler.calculatepagerank()") 2262510 function calls in 136.006 CPU seconds Ordered by: standard name ncalls tottime percall cumtime percall filename:lineno(function) 1 0.000 0.000 136.006 136.006 <string>:1(<module>) 1 20.826 20.826 136.006 136.006 searchengine.py:179(calculatepagerank) 21 0.000 0.000 0.528 0.025 searchengine.py:27(dbcommit) 21 0.528 0.025 0.528 0.025 {method 'commit' of 'sqlite3.Connecti 1 0.000 0.000 0.000 0.000 {method 'disable' of '_lsprof.Profiler 1339864 112.602 0.000 112.602 0.000 {method 'execute' of 'sqlite3.Connec 922600 2.050 0.000 2.050 0.000 {method 'fetchone' of 'sqlite3.Cursor' 1 0.000 0.000 0.000 0.000 {range} So I optimized the function and came up with this: def calculatepagerank2(self,iterations=20): # clear out the current PageRank tables self.con.execute("drop table if exists pagerank") self.con.execute("create table pagerank(urlid primary key,score)") self.con.execute("create index prankidx on pagerank(urlid)") # initialize every url with a PageRank of 1.0 self.con.execute("insert into pagerank select rowid,1.0 from urllist") self.dbcommit() inlinks={} numoutlinks={} pagerank={} for (urlid,) in self.con.execute("select rowid from urllist"): inlinks[urlid]=[] numoutlinks[urlid]=0 # Initialize pagerank vector with 1.0 pagerank[urlid]=1.0 # Loop through all the pages that link to this one for (inlink,) in self.con.execute("select distinct fromid from link where toid=%d" % urlid): inlinks[urlid].append(inlink) # get number of outgoing links from a page numoutlinks[urlid]=self.con.execute("select count(*) from link where fromid=%d" % urlid).fetchone()[0] for i in range(iterations): print "Iteration %d" % i for urlid in pagerank: pr=0.15 for link in inlinks[urlid]: linkpr=pagerank[link] linkcount=numoutlinks[link] pr+=0.85*(linkpr/linkcount) pagerank[urlid]=pr for urlid in pagerank: self.con.execute("update pagerank set score=%f where urlid=%d" % (pagerank[urlid],urlid)) self.dbcommit() This function is 20 times faster (but uses a lot more memory for all the temporary dictionaries) because it avoids the unnecessary SQL queries in every iteration: >>> cProfile.run("crawler.calculatepagerank2()") 64802 function calls in 6.950 CPU seconds Ordered by: standard name ncalls tottime percall cumtime percall filename:lineno(function) 1 0.004 0.004 6.950 6.950 <string>:1(<module>) 1 1.004 1.004 6.946 6.946 searchengine.py:207(calculatepagerank2 2 0.000 0.000 0.104 0.052 searchengine.py:27(dbcommit) 23065 0.012 0.000 0.012 0.000 {meth 'append' of 'list' objects} 2 0.104 0.052 0.104 0.052 {meth 'commit' of 'sqlite3.Connection 1 0.000 0.000 0.000 0.000 {meth 'disable' of '_lsprof.Profiler' 31298 5.809 0.000 5.809 0.000 {meth 'execute' of 'sqlite3.Connectio 10431 0.018 0.000 0.018 0.000 {method 'fetchone' of 'sqlite3.Cursor' 1 0.000 0.000 0.000 0.000 {range} But is it possible to further reduce the number of SQL queries to speed up the function even more?

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• android service onBind SecurityException

  - by Metalex

  I don't know why but in some devices my service isn't allowed to bind. java.lang.RuntimeException: Unable to create application mypackage.MyApplication: java.lang.SecurityException: Unable to find app for caller android.app.ApplicationThreadProxy@41680e78 (pid=16805) when binding service Intent { cmp=mypackage/.MyService } at android.app.ActivityThread.handleBindApplication(ActivityThread.java:4394) at android.app.ActivityThread.access$1300(ActivityThread.java:141) at android.app.ActivityThread$H.handleMessage(ActivityThread.java:1294) at android.os.Handler.dispatchMessage(Handler.java:99) at android.os.Looper.loop(Looper.java:137) at android.app.ActivityThread.main(ActivityThread.java:5039) at java.lang.reflect.Method.invokeNative(Native Method) at java.lang.reflect.Method.invoke(Method.java:511) at com.android.internal.os.ZygoteInit$MethodAndArgsCaller.run(ZygoteInit.java:793) at com.android.internal.os.ZygoteInit.main(ZygoteInit.java:560) at dalvik.system.NativeStart.main(Native Method) Caused by: java.lang.SecurityException: Unable to find app for caller android.app.ApplicationThreadProxy@41680e78 (pid=16805) when binding service Intent { cmp=mypackage/.MyService } at android.os.Parcel.readException(Parcel.java:1425) at android.os.Parcel.readException(Parcel.java:1379) at android.app.ActivityManagerProxy.bindService(ActivityManagerNative.java:2720) at android.app.ContextImpl.bindService(ContextImpl.java:1431) at android.app.ContextImpl.bindService(ContextImpl.java:1407) at android.content.ContextWrapper.bindService(ContextWrapper.java:473) at mypackage.MyApplication.openService(MyApplication.java:151) at mypackage.MyApplication.onCreate(MyApplication.java:110) at android.app.Instrumentation.callApplicationOnCreate(Instrumentation.java:1000) at android.app.ActivityThread.handleBindApplication(ActivityThread.java:4391) ... 10 more java.lang.SecurityException: Unable to find app for caller android.app.ApplicationThreadProxy@41680e78 (pid=16805) when binding service Intent { cmp=mypackage/.MyService } at android.os.Parcel.readException(Parcel.java:1425) at android.os.Parcel.readException(Parcel.java:1379) at android.app.ActivityManagerProxy.bindService(ActivityManagerNative.java:2720) at android.app.ContextImpl.bindService(ContextImpl.java:1431) at android.app.ContextImpl.bindService(ContextImpl.java:1407) at android.content.ContextWrapper.bindService(ContextWrapper.java:473) at mypackage.MyApplication.openService(MyApplication.java:151) at mypackage.MyApplication.onCreate(MyApplication.java:110) at android.app.Instrumentation.callApplicationOnCreate(Instrumentation.java:1000) at android.app.ActivityThread.handleBindApplication(ActivityThread.java:4391) at android.app.ActivityThread.access$1300(ActivityThread.java:141) at android.app.ActivityThread$H.handleMessage(ActivityThread.java:1294) at android.os.Handler.dispatchMessage(Handler.java:99) at android.os.Looper.loop(Looper.java:137) at android.app.ActivityThread.main(ActivityThread.java:5039) at java.lang.reflect.Method.invokeNative(Native Method) at java.lang.reflect.Method.invoke(Method.java:511) at com.android.internal.os.ZygoteInit$MethodAndArgsCaller.run(ZygoteInit.java:793) at com.android.internal.os.ZygoteInit.main(ZygoteInit.java:560) at dalvik.system.NativeStart.main(Native Method) Code from MyApplication: @Override public void onCreate() { super.onCreate(); openService(); } public void openService() { Intent service = new Intent(this, MyService.class); mConnection = new ServiceConnection() { @Override public void onServiceConnected(ComponentName name, IBinder service) { mService = IMyService.Stub.asInterface(service); if (mListener != null) { mListener.onServiceStarted(mService); } } @Override public void onServiceDisconnected(ComponentName cn) { mService = null; } }; bindService(service, mConnection, Context.BIND_AUTO_CREATE); // 151 line } Please help me! Thank you!

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• NTRU Pseudo-code for computing Polynomial Inverses

  - by Neville

  Hello all. I was wondering if anyone could tell me how to implement line 45 of the following pseudo-code. Require: the polynomial to invert a(x), N, and q. 1: k = 0 2: b = 1 3: c = 0 4: f = a 5: g = 0 {Steps 5-7 set g(x) = x^N - 1.} 6: g[0] = -1 7: g[N] = 1 8: loop 9: while f[0] = 0 do 10: for i = 1 to N do 11: f[i - 1] = f[i] {f(x) = f(x)/x} 12: c[N + 1 - i] = c[N - i] {c(x) = c(x) * x} 13: end for 14: f[N] = 0 15: c[0] = 0 16: k = k + 1 17: end while 18: if deg(f) = 0 then 19: goto Step 32 20: end if 21: if deg(f) < deg(g) then 22: temp = f {Exchange f and g} 23: f = g 24: g = temp 25: temp = b {Exchange b and c} 26: b = c 27: c = temp 28: end if 29: f = f XOR g 30: b = b XOR c 31: end loop 32: j = 0 33: k = k mod N 34: for i = N - 1 downto 0 do 35: j = i - k 36: if j < 0 then 37: j = j + N 38: end if 39: Fq[j] = b[i] 40: end for 41: v = 2 42: while v < q do 43: v = v * 2 44: StarMultiply(a; Fq; temp;N; v) 45: temp = 2 - temp mod v 46: StarMultiply(Fq; temp; Fq;N; v) 47: end while 48: for i = N - 1 downto 0 do 49: if Fq[i] < 0 then 50: Fq[i] = Fq[i] + q 51: end if 52: end for 53: {Inverse Poly Fq returns the inverse polynomial, Fq, through the argument list.} The function StarMultiply returns a polynomial (array) stored in the variable temp. Basically temp is a polynomial (I'm representing it as an array) and v is an integer (say 4 or 8), so what exactly does temp = 2-temp mod v equate to in normal language? How should i implement that line in my code. Can someone give me an example. The above algorithm is for computing Inverse polynomials for NTRUEncrypt key generation. The pseudo-code can be found on page 28 of this document. Thanks in advance.

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• How to diagnose frequent segfaults

  - by Andreas Gohr

  My server is logging frequent segmentation faults to /var/log/kern.log in different tools. So far I've seen them in Perl, PHP and rsync. All installed software is up-to-date Debian packages. Here's an exerpt from the log file: Mar 2 01:07:54 gaz kernel: [ 5316.246303] imapsync[4533]: segfault at 8b ip 00007fb448c98fe6 sp 00007ffff571dd68 error 4 in libperl.so.5.10.1[7fb448bd7000+164000] Mar 2 01:17:42 gaz kernel: [ 5904.354307] php5-cgi[4441]: segfault at 2bb3dc8 ip 0000000002bb3dc8 sp 00007fffbeeaae48 error 15 Mar 2 02:54:05 gaz kernel: [11687.922316] php5-cgi[4495]: segfault at 2d7acf9 ip 0000000002d7acf9 sp 00007fff60c6eb18 error 15 Mar 2 10:50:08 gaz kernel: [40250.390322] BUG: unable to handle kernel paging request at 00000000024b03f0 Mar 2 10:50:08 gaz kernel: [40250.390341] IP: [<00000000024b03f0>] 0x24b03f0 Mar 2 10:50:08 gaz kernel: [40250.390353] PGD 208c71067 PUD 21c811067 PMD 209329067 PTE 8000000211c88067 Mar 2 10:50:08 gaz kernel: [40250.390365] Oops: 0011 [#1] SMP Mar 2 10:50:08 gaz kernel: [40250.390373] last sysfs file: /sys/devices/pci0000:00/0000:00:12.0/host4/target4:0:0/4:0:0:0/block/sdb/stat Mar 2 10:50:08 gaz kernel: [40250.390386] CPU 1 Mar 2 10:50:08 gaz kernel: [40250.390392] Modules linked in: cpufreq_userspace cpufreq_stats cpufreq_powersave cpufreq_conservative xt_recent xt_tcpudp iptable_nat nf_nat nf_conntrack_ipv4 nf_defrag_ ipv4 ip6table_filter ip6_tables xt_DSCP xt_TCPMSS ipt_LOG ipt_REJECT iptable_mangle iptable_filter xt_multiport xt_state xt_limit xt_conntrack nf_conntrack_ftp nf_conntrack ip_tables x_tables loop snd _hda_codec_atihdmi snd_hda_intel snd_hda_codec snd_hwdep snd_pcm radeon snd_timer ttm snd drm_kms_helper soundcore drm snd_page_alloc i2c_algo_bit shpchp i2c_piix4 edac_core pcspkr k8temp evdev edac_m ce_amd pci_hotplug i2c_core button ext3 jbd mbcache dm_mod powernow_k8 aacraid 3w_9xxx 3w_xxxx raid10 raid456 async_raid6_recov async_pq raid6_pq async_xor xor async_memcpy async_tx raid1 raid0 md_mod sata_nv sata_sil sata_via sd_mod crc_t10dif ata_generic ahci pata_atiixp ohci_hcd libata r8169 mii thermal ehci_hcd processor thermal_sys scsi_mod usbcore nls_base [last unloaded: scsi_wait_scan] Mar 2 10:50:08 gaz kernel: [40250.390566] Pid: 11482, comm: munin-limits Not tainted 2.6.32-5-amd64 #1 MS-7368 Mar 2 10:50:08 gaz kernel: [40250.390576] RIP: 0010:[<00000000024b03f0>] [<00000000024b03f0>] 0x24b03f0 Mar 2 10:50:08 gaz kernel: [40250.390586] RSP: 0018:ffff88021cc8dec0 EFLAGS: 00010286 Mar 2 10:50:08 gaz kernel: [40250.390593] RAX: 000000001ddc1000 RBX: 0000000000000010 RCX: ffffffff810f9904 Mar 2 10:50:08 gaz kernel: [40250.390600] RDX: 0000000000000000 RSI: ffffea0007688200 RDI: 0000000000000286 Mar 2 10:50:08 gaz kernel: [40250.390608] RBP: 00000000ffffffea R08: 0000000000000025 R09: 7865542f30312e35 Mar 2 10:50:08 gaz kernel: [40250.390615] R10: 000000d01cc8ddf8 R11: 0000000000000246 R12: ffff88021cc8def8 Mar 2 10:50:08 gaz kernel: [40250.390622] R13: 0000000002295010 R14: 00000000022c9db0 R15: 0000000002488d78 Mar 2 10:50:08 gaz kernel: [40250.390630] FS: 00007f3b3c8b2700(0000) GS:ffff880008d00000(0000) knlGS:0000000000000000 Mar 2 10:50:08 gaz kernel: [40250.390641] CS: 0010 DS: 0000 ES: 0000 CR0: 0000000080050033 Mar 2 10:50:08 gaz kernel: [40250.390648] CR2: 00000000024b03f0 CR3: 000000021c5d1000 CR4: 00000000000006e0 Mar 2 10:50:08 gaz kernel: [40250.390656] DR0: 0000000000000000 DR1: 0000000000000000 DR2: 0000000000000000 Mar 2 10:50:08 gaz kernel: [40250.390663] DR3: 0000000000000000 DR6: 00000000ffff0ff0 DR7: 0000000000000400 Mar 2 10:50:08 gaz kernel: [40250.390671] Process munin-limits (pid: 11482, threadinfo ffff88021cc8c000, task ffff88021bf59530) Mar 2 10:50:08 gaz kernel: [40250.390681] Stack: Mar 2 10:50:08 gaz kernel: [40250.390687] ffffffff810f1d4a ffff880208c63228 0000000000000000 00007fffc2dcecc0 Mar 2 10:50:08 gaz kernel: [40250.390697] <0> 00000000024ba2b0 0000000002295010 ffffffff810f1e3d 0000000000000004 Mar 2 10:50:08 gaz kernel: [40250.390712] <0> ffff88021bf59530 ffff88021c4edc00 ffffffff812fe0b6 ffff88021c4edc60 Mar 2 10:50:08 gaz kernel: [40250.390732] Call Trace: Mar 2 10:50:08 gaz kernel: [40250.390742] [<ffffffff810f1d4a>] ? vfs_fstatat+0x2c/0x57 Mar 2 10:50:08 gaz kernel: [40250.390750] [<ffffffff810f1e3d>] ? sys_newstat+0x11/0x30 Mar 2 10:50:08 gaz kernel: [40250.390760] [<ffffffff812fe0b6>] ? do_page_fault+0x2e0/0x2fc Mar 2 10:50:08 gaz kernel: [40250.390768] [<ffffffff812fbf55>] ? page_fault+0x25/0x30 Mar 2 10:50:08 gaz kernel: [40250.390777] [<ffffffff81010b42>] ? system_call_fastpath+0x16/0x1b Mar 2 10:50:08 gaz kernel: [40250.390783] Code: Bad RIP value. Mar 2 10:50:08 gaz kernel: [40250.390791] RIP [<00000000024b03f0>] 0x24b03f0 Mar 2 10:50:08 gaz kernel: [40250.390799] RSP <ffff88021cc8dec0> Mar 2 10:50:08 gaz kernel: [40250.390805] CR2: 00000000024b03f0 Mar 2 10:50:08 gaz kernel: [40250.391051] ---[ end trace 1cc1473b539c7f6e ]--- Mar 2 11:42:20 gaz kernel: [43382.242301] php5-cgi[10963]: segfault at d81160 ip 0000000000d81160 sp 00007fff3adcb058 error 15 Mar 2 21:51:14 gaz kernel: [79916.418302] php5-cgi[20089]: segfault at 1c59dc8 ip 0000000001c59dc8 sp 00007fff9b877fb8 error 15 Mar 3 03:45:01 gaz kernel: [101143.334305] munin-update[22519] general protection ip:7f516dce204c sp:7fff6049a978 error:0 in libperl.so.5.10.1[7f516dc7d000+164000] Mar 3 11:22:37 gaz kernel: [128599.570307] php5-cgi[22888]: segfault at 36485a8 ip 00000000036485a8 sp 00007fff2d56e1c8 error 15 Mar 4 08:32:17 gaz kernel: [204779.842304] php5-cgi[22090]: segfault at 18 ip 0000000000689e5e sp 00007fff677a6a48 error 6 in php5-cgi[400000+6f9000] Mar 4 10:01:02 gaz kernel: [210104.434706] rsync[22236] general protection ip:7f14a07137f9 sp:7fff88f940b8 error:0 in libc-2.11.2.so[7f14a069d000+158000] Mar 4 11:32:22 gaz kernel: [215584.262316] BUG: unable to handle kernel paging request at 00000000ffffff9c Mar 4 11:32:22 gaz kernel: [215584.262331] IP: [<00000000ffffff9c>] 0xffffff9c Mar 4 11:32:22 gaz kernel: [215584.262343] PGD 0 Mar 4 11:32:22 gaz kernel: [215584.262350] Oops: 0010 [#2] SMP Mar 4 11:32:22 gaz kernel: [215584.262359] last sysfs file: /sys/devices/pci0000:00/0000:00:12.0/host4/target4:0:0/4:0:0:0/block/sdb/stat Mar 4 11:32:22 gaz kernel: [215584.262371] CPU 1 Mar 4 11:32:22 gaz kernel: [215584.262378] Modules linked in: cpufreq_userspace cpufreq_stats cpufreq_powersave cpufreq_conservative xt_recent xt_tcpudp iptable_nat nf_nat nf_conntrack_ipv4 nf_defrag_ipv4 ip6table_filter ip6_tables xt_DSCP xt_TCPMSS ipt_LOG ipt_REJECT iptable_mangle iptable_filter xt_multiport xt_state xt_limit xt_conntrack nf_conntrack_ftp nf_conntrack ip_tables x_tables loop snd_hda_codec_atihdmi snd_hda_intel snd_hda_codec snd_hwdep snd_pcm radeon snd_timer ttm snd drm_kms_helper soundcore drm snd_page_alloc i2c_algo_bit shpchp i2c_piix4 edac_core pcspkr k8temp evdev edac_mce_amd pci_hotplug i2c_core button ext3 jbd mbcache dm_mod powernow_k8 aacraid 3w_9xxx 3w_xxxx raid10 raid456 async_raid6_recov async_pq raid6_pq async_xor xor async_memcpy async_tx raid1 raid0 md_mod sata_nv sata_sil sata_via sd_mod crc_t10dif ata_generic ahci pata_atiixp ohci_hcd libata r8169 mii thermal ehci_hcd processor thermal_sys scsi_mod usbcore nls_base [last unloaded: scsi_wait_scan] Mar 4 11:32:22 gaz kernel: [215584.262552] Pid: 1960, comm: proxymap Tainted: G D 2.6.32-5-amd64 #1 MS-7368 Mar 4 11:32:22 gaz kernel: [215584.262563] RIP: 0010:[<00000000ffffff9c>] [<00000000ffffff9c>] 0xffffff9c Mar 4 11:32:22 gaz kernel: [215584.262573] RSP: 0018:ffff880209257e00 EFLAGS: 00010212 Mar 4 11:32:22 gaz kernel: [215584.262580] RAX: ffff8801514eb780 RBX: ffffffff810efb2d RCX: 0000000000000000 Mar 4 11:32:22 gaz kernel: [215584.262590] RDX: 0000000000000020 RSI: 0000000000000001 RDI: ffff8801514eb780 Mar 4 11:32:22 gaz kernel: [215584.262600] RBP: 00000000ffffffe9 R08: 0000000000000000 R09: 0000000000000000 Mar 4 11:32:22 gaz kernel: [215584.262611] R10: ffff880209257e78 R11: ffffffff81152c7c R12: 0000000000000001 Mar 4 11:32:22 gaz kernel: [215584.262622] R13: 0000000000008001 R14: 0000000000000024 R15: 00000000ffffff9c Mar 4 11:32:22 gaz kernel: [215584.262633] FS: 00007fca4de35700(0000) GS:ffff880008d00000(0000) knlGS:0000000000000000 Mar 4 11:32:22 gaz kernel: [215584.262644] CS: 0010 DS: 0000 ES: 0000 CR0: 0000000080050033 Mar 4 11:32:22 gaz kernel: [215584.262650] CR2: 00000000ffffff9c CR3: 00000001c9cbb000 CR4: 00000000000006e0 Mar 4 11:32:22 gaz kernel: [215584.262661] DR0: 0000000000000000 DR1: 0000000000000000 DR2: 0000000000000000 Mar 4 11:32:22 gaz kernel: [215584.262671] DR3: 0000000000000000 DR6: 00000000ffff0ff0 DR7: 0000000000000400 Mar 4 11:32:22 gaz kernel: [215584.262682] Process proxymap (pid: 1960, threadinfo ffff880209256000, task ffff88021c4b1c40) Mar 4 11:32:22 gaz kernel: [215584.262693] Stack: Mar 4 11:32:22 gaz kernel: [215584.262698] ffffffff810f8566 ffff880209257e78 ffff88021c7bf000 ffff88021c7bf0c8 Mar 4 11:32:22 gaz kernel: [215584.262709] <0> 0000800000000000 ffff88021fc0f000 ffff880209257e78 00000000fffffffe Mar 4 11:32:22 gaz kernel: [215584.262724] <0> ffffffff810e5881 ffff880209257f48 0000000000000286 ffff88021fc0f000 Mar 4 11:32:22 gaz kernel: [215584.262743] Call Trace: Mar 4 11:32:22 gaz kernel: [215584.262753] [<ffffffff810f8566>] ? do_filp_open+0xa7/0x94b Mar 4 11:32:22 gaz kernel: [215584.262763] [<ffffffff810e5881>] ? virt_to_head_page+0x9/0x2a Mar 4 11:32:22 gaz kernel: [215584.262771] [<ffffffff810f9904>] ? user_path_at+0x52/0x79 Mar 4 11:32:22 gaz kernel: [215584.262779] [<ffffffff810cfec1>] ? get_unmapped_area+0xd7/0x139 Mar 4 11:32:22 gaz kernel: [215584.262787] [<ffffffff811019d5>] ? alloc_fd+0x67/0x10c Mar 4 11:32:22 gaz kernel: [215584.262795] [<ffffffff810eceaf>] ? do_sys_open+0x55/0xfc Mar 4 11:32:22 gaz kernel: [215584.262804] [<ffffffff81010b42>] ? system_call_fastpath+0x16/0x1b Mar 4 11:32:22 gaz kernel: [215584.262811] Code: Bad RIP value. Mar 4 11:32:22 gaz kernel: [215584.262819] RIP [<00000000ffffff9c>] 0xffffff9c Mar 4 11:32:22 gaz kernel: [215584.262828] RSP <ffff880209257e00> Mar 4 11:32:22 gaz kernel: [215584.262833] CR2: 00000000ffffff9c Mar 4 11:32:22 gaz kernel: [215584.263077] ---[ end trace 1cc1473b539c7f6f ]--- As you can see there are segfaults, a general protection fault and a Kernel Oops. My first guess was that there's a Hardware problem of some sort and I asked my Hoster (it's a rented root server) to do a full hardwarecheck - they did, but couldn't find any problem. I don't know what and how they checked but their support team is usually quite good. I ran memtester and cpuburn myself and couldn't find any error either. Unfortunately I have no reliable way to reproduce these segfaults, they seem to be more or less random. On a hunch I disabled the firewall of the system and ran one of the programs that segfaulted regularily (imapsync) and it seemed to take longer to segfault than before, so the problem might be related to the network stack. Or could just be a random thing. Here are the kernel specs: # uname -a Linux gaz 2.6.32-5-amd64 #1 SMP Wed Jan 12 03:40:32 UTC 2011 x86_64 GNU/Linux # cat /etc/debian_version 6.0 # lsmod Module Size Used by cpufreq_userspace 1992 0 cpufreq_stats 2659 0 cpufreq_powersave 902 0 cpufreq_conservative 5162 0 xt_recent 5977 0 xt_tcpudp 2319 0 iptable_nat 4299 0 nf_nat 13388 1 iptable_nat nf_conntrack_ipv4 9833 3 iptable_nat,nf_nat nf_defrag_ipv4 1139 1 nf_conntrack_ipv4 ip6table_filter 2384 0 ip6_tables 15075 1 ip6table_filter xt_DSCP 1995 0 xt_TCPMSS 2919 0 ipt_LOG 4518 0 ipt_REJECT 1953 0 iptable_mangle 2817 0 iptable_filter 2258 0 xt_multiport 2267 0 xt_state 1303 0 xt_limit 1782 0 xt_conntrack 2407 0 nf_conntrack_ftp 5537 0 nf_conntrack 46535 6 iptable_nat,nf_nat,nf_conntrack_ipv4,xt_state,xt_conntrack,nf_conntrack_ftp ip_tables 13899 3 iptable_nat,iptable_mangle,iptable_filter x_tables 12845 13 xt_recent,xt_tcpudp,iptable_nat,ip6_tables,xt_DSCP,xt_TCPMSS,ipt_LOG,ipt_REJECT,xt_multiport,xt_state,xt_limit,xt_conntrack,ip_tables loop 11799 0 radeon 573996 0 ttm 39986 1 radeon drm_kms_helper 20065 1 radeon snd_hda_codec_atihdmi 2251 1 drm 142359 3 radeon,ttm,drm_kms_helper snd_hda_intel 20019 0 i2c_algo_bit 4225 1 radeon pcspkr 1699 0 i2c_piix4 8328 0 snd_hda_codec 54244 2 snd_hda_codec_atihdmi,snd_hda_intel i2c_core 15712 5 radeon,drm_kms_helper,drm,i2c_algo_bit,i2c_piix4 snd_hwdep 5380 1 snd_hda_codec snd_pcm 60503 2 snd_hda_intel,snd_hda_codec snd_timer 15582 1 snd_pcm snd 46446 5 snd_hda_intel,snd_hda_codec,snd_hwdep,snd_pcm,snd_timer soundcore 4598 1 snd evdev 7352 3 snd_page_alloc 6249 2 snd_hda_intel,snd_pcm k8temp 3283 0 edac_core 29261 0 edac_mce_amd 6433 0 shpchp 26264 0 pci_hotplug 21203 1 shpchp button 4650 0 ext3 106518 2 jbd 37085 1 ext3 mbcache 5050 1 ext3 dm_mod 53754 0 powernow_k8 10978 1 aacraid 59779 0 3w_9xxx 28684 0 3w_xxxx 20569 0 raid10 17809 0 raid456 44500 0 async_raid6_recov 5170 1 raid456 async_pq 3479 2 raid456,async_raid6_recov raid6_pq 77179 2 async_raid6_recov,async_pq async_xor 2478 3 raid456,async_raid6_recov,async_pq xor 4380 1 async_xor async_memcpy 1198 2 raid456,async_raid6_recov async_tx 1734 5 raid456,async_raid6_recov,async_pq,async_xor,async_memcpy raid1 18431 3 raid0 5517 0 md_mod 73824 7 raid10,raid456,raid1,raid0 sata_nv 19166 0 sata_sil 7412 0 sata_via 7928 0 sd_mod 29889 8 crc_t10dif 1276 1 sd_mod ata_generic 3047 0 ahci 32374 6 r8169 29229 0 mii 3210 1 r8169 thermal 11674 0 pata_atiixp 3489 0 libata 133632 6 sata_nv,sata_sil,sata_via,ata_generic,ahci,pata_atiixp ohci_hcd 19212 0 ehci_hcd 31151 0 processor 29935 1 powernow_k8 thermal_sys 11942 2 thermal,processor scsi_mod 122149 5 aacraid,3w_9xxx,3w_xxxx,sd_mod,libata usbcore 122034 3 ohci_hcd,ehci_hcd nls_base 6377 1 usbcore # free total used free shared buffers cached Mem: 8166128 1228036 6938092 0 140412 782060 -/+ buffers/cache: 305564 7860564 Swap: 2102456 0 2102456 So, basically my questions are: How can I diagnose this further? Is there any data in the log above that could help me to isolate the troublemaker? Are there any known problems with the above hardware/software I overlooked when googling for it? Is there a way to prevent the kernel from autoloading modules (I probably don't need all these modules and one of them might be the culprit)

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• iPhone SDK: Audio Queue control

  - by codemercenary

  Hi all, I am new to the audio queue services so I have taken an example from a book called iPhone Cool Projects where it describes how to stream audio. I want to extend this to being able to play a continuous playlist of links to mp3 files like an internet radio. The problem with the example code it that it does not detect when a stream ends and does not call AudioQueueStop at any point, so I added a counter to number of buffers added to the queue, and then decrement this counter each time audioQueueOutputCallback is called by the queue. This works fine except if when the buffer count goes to 0, and then I add a call AudioQueueFlush(audioQueue) and then AudioQueueStop(audioQueue, false) I get an error. If I only call AudioQueueReset, it continues to load the buffers again, but plays them out faster then it loads them... getting stuck in a loop and then crashing. 2010-04-14 13:56:29.745 AudioPlayer[2269:207] init player with URL 2010-04-14 13:56:29.941 AudioPlayer[2269:207] did recieve data 2010-04-14 13:56:29.942 AudioPlayer[2269:207] audio request didReceiveData 2010-04-14 13:56:29.944 AudioPlayer[2269:207] >>> start audio queue 2010-04-14 13:56:29.960 AudioPlayer[2269:207] packetCallback count 2 2010-04-14 13:56:29.961 AudioPlayer[2269:207] add buffer: 1 2010-04-14 13:56:29.962 AudioPlayer[2269:207] did recieve data 2010-04-14 13:56:29.963 AudioPlayer[2269:207] audio request didReceiveData 2010-04-14 13:56:29.963 AudioPlayer[2269:207] packetCallback count 1 2010-04-14 13:56:29.964 AudioPlayer[2269:207] add buffer: 2 2010-04-14 13:56:29.965 AudioPlayer[2269:207] packetCallback count 13 2010-04-14 13:56:29.967 AudioPlayer[2269:207] add buffer: 3 2010-04-14 13:56:29.968 AudioPlayer[2269:207] done with buffer: 3 2010-04-14 13:56:29.969 AudioPlayer[2269:207] done with buffer: 2 2010-04-14 13:56:29.974 AudioPlayer[2269:207] done with buffer: 1 So this loop continues some 20 - 30 times and then it crashes. The first time it plays an audio file it queues up the buffers and then plays sound, but doesn't callback to delete them until some 100 or more have been played. Can anyone explain this behavior? I read that there was a limit of 1 audio queue for MP3 playback for the iPhone. Is that still true? If not then I suppose I should use another audio queue for the next mp3 stream. I've had a look through the apple docs but it doesn't explain this in any particular detail. A better insight into this would be great. TIA.

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• Recursive calls in Pentaho Data Integration

  - by davek

  Is it possible for a step or transformation in Pentaho Data Integration to call itself, passing the results of the previous call as parameters/variables? My first thought was to create a loop in a transformation, but they don't seem to be allowed...

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• How to best design a date/geographic proximity query on GAE?

  - by Dane

  Hi all, I'm building a directory for finding athletic tournaments on GAE with web2py and a Flex front end. The user selects a location, a radius, and a maximum date from a set of choices. I have a basic version of this query implemented, but it's inefficient and slow. One way I know I can improve it is by condensing the many individual queries I'm using to assemble the objects into bulk queries. I just learned that was possible. But I'm also thinking about a more extensive redesign that utilizes memcache. The main problem is that I can't query the datastore by location because GAE won't allow multiple numerical comparison statements (<,<=,=,) in one query. I'm already using one for date, and I'd need TWO to check both latitude and longitude, so it's a no go. Currently, my algorithm looks like this: 1.) Query by date and select 2.) Use destination function from geopy's distance module to find the max and min latitude and longitudes for supplied distance 3.) Loop through results and remove all with lat/lng outside max/min 4.) Loop through again and use distance function to check exact distance, because step 2 will include some areas outside the radius. Remove results outside supplied distance (is this 2/3/4 combination inefficent?) 5.) Assemble many-to-many lists and attach to objects (this is where I need to switch to bulk operations) 6.) Return to client Here's my plan for using memcache.. let me know if I'm way out in left field on this as I have no prior experience with memcache or server caching in general. -Keep a list in the cache filled with "geo objects" that represent all my data. These have five properties: latitude, longitude, event_id, event_type (in anticipation of expanding beyond tournaments), and start_date. This list will be sorted by date. -Also keep a dict of pointers in the cache which represent the start and end indices in the cache for all the date ranges my app uses (next week, 2 weeks, month, 3 months, 6 months, year, 2 years). -Have a scheduled task that updates the pointers daily at 12am. -Add new inserts to the cache as well as the datastore; update pointers. Using this design, the algorithm would now look like: 1.) Use pointers to slice off appropriate chunk of list based on supplied date. 2-4.) Same as above algorithm, except with geo objects 5.) Use bulk operation to select full tournaments using remaining geo objects' event_ids 6.) Assemble many-to-manys 7.) Return to client Thoughts on this approach? Many thanks for reading and any advice you can give. -Dane

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• Get/open temp file in .NET

  - by acidzombie24

  I would like to do something like the below. What function returns me an unique file that is opened? so i can ensure it is mine and i wont overwrite anything or write a complex fn generate/loop BinaryWriter w = GetTempFile(out fn); w.close(); File.Move(fn, newFn);

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• Python - Execute Process -> Block till it exits & Supress Output

  - by Jason

  Hi, I'm using the following to execute a process and hide its output from Python. It's in a loop though, and I need a way to block until the sub process has terminated before moving to the next iteration. subprocess.Popen(["scanx", "--udp", host], stdin=subprocess.PIPE, stdout=subprocess.PIPE, stderr=subprocess.PIPE) Thanks for any help.

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• Mochiweb's Scalability Features

  - by ErJab

  From all the articles I've read so far about Mochiweb, I've heard this over and over again that Mochiweb provides very good scalability. My question is, how exactly does Mochiweb get its scalability property? Is it from Erlang's inherent scalability properties or does Mochiweb have any additional code that explicitly enables it to scale well? Put another way, if I were to write a simple HTTP server in Erlang myself, with a simple 'loop' (recursive function) to handle requests, would it have the same level scalability as a simple web server built using the Mochiweb framework?

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• Zooming in an NSView

  - by jasonbogd

  Hi, I have an NSView in which the user can draw circles. These circles are stored as an array of NSBezierPaths, and in drawRect:, I loop through the array and call -stroke on each of the paths. How do I add a button to zoom in and out the NSView? Just change the bounds of the view? Thanks.

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• Need help implementing simple socket server using GIOService (GLib, Glib-GIO)

  - by Mark Renouf

  I'm learning the basics of writing a simple, efficient socket server using GLib. I'm experimenting with GSocketService. So far I can only seem to accept connections but then they are immediately closed. From the docs I can't figure out what step I am missing. I'm hoping someone can shed some light on this for me. When running the following: # telnet localhost 4000 Trying 127.0.0.1... Connected to localhost. Escape character is '^]'. Connection closed by foreign host. # telnet localhost 4000 Trying 127.0.0.1... Connected to localhost. Escape character is '^]'. Connection closed by foreign host. # telnet localhost 4000 Trying 127.0.0.1... Connected to localhost. Escape character is '^]'. Connection closed by foreign host. Output from the server: # ./server New Connection from 127.0.0.1:36962 New Connection from 127.0.0.1:36963 New Connection from 127.0.0.1:36965 Current code: /* * server.c * * Created on: Mar 10, 2010 * Author: mark */ #include <glib.h> #include <gio/gio.h> gchar *buffer; gboolean network_read(GIOChannel *source, GIOCondition cond, gpointer data) { GString *s = g_string_new(NULL); GError *error; GIOStatus ret = g_io_channel_read_line_string(source, s, NULL, &error); if (ret == G_IO_STATUS_ERROR) g_error ("Error reading: %s\n", error->message); else g_print("Got: %s\n", s->str); } gboolean new_connection(GSocketService *service, GSocketConnection *connection, GObject *source_object, gpointer user_data) { GSocketAddress *sockaddr = g_socket_connection_get_remote_address(connection, NULL); GInetAddress *addr = g_inet_socket_address_get_address(G_INET_SOCKET_ADDRESS(sockaddr)); guint16 port = g_inet_socket_address_get_port(G_INET_SOCKET_ADDRESS(sockaddr)); g_print("New Connection from %s:%d\n", g_inet_address_to_string(addr), port); GSocket *socket = g_socket_connection_get_socket(connection); gint fd = g_socket_get_fd(socket); GIOChannel *channel = g_io_channel_unix_new(fd); g_io_add_watch(channel, G_IO_IN, (GIOFunc) network_read, NULL); return TRUE; } int main(int argc, char **argv) { g_type_init(); GSocketService *service = g_socket_service_new(); GInetAddress *address = g_inet_address_new_from_string("127.0.0.1"); GSocketAddress *socket_address = g_inet_socket_address_new(address, 4000); g_socket_listener_add_address(G_SOCKET_LISTENER(service), socket_address, G_SOCKET_TYPE_STREAM, G_SOCKET_PROTOCOL_TCP, NULL, NULL, NULL); g_object_unref(socket_address); g_object_unref(address); g_socket_service_start(service); g_signal_connect(service, "incoming", G_CALLBACK(new_connection), NULL); GMainLoop *loop = g_main_loop_new(NULL, FALSE); g_main_loop_run(loop); }

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• Sequence reduction in R

  - by drknexus

  Assume you have a vector like so: v <- c(1,1,1,2,2,2,2,1,1,3,3,3,3) How can it be best reduced to a data.frame like this? v.df <- data.frame(value=c(1,2,1,3),repetitions=c(3,4,2,4)) In a procedural language I might just iterate through a loop and build the data.frame as I go, but with a large dataset in R such an approach is inefficient. Any advice?

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