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  • Splitting a list in python

    - by mglmnc
    Hey im new to python. How do you get a portion of a list by the relative value of its sorting key. example... list = [11,12,13,14,15,16,1,2,3,4,5,6,7,8,9,10] list.sort() newList = list.split("all numbers that are over 13") assert newList == [14,15,16]

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  • Faster way to split a string and count characters using R?

    - by chrisamiller
    I'm looking for a faster way to calculate GC content for DNA strings read in from a FASTA file. This boils down to taking a string and counting the number of times that the letter 'G' or 'C' appears. I also want to specify the range of characters to consider. I have a working function that is fairly slow, and it's causing a bottleneck in my code. It looks like this: ## ## count the number of GCs in the characters between start and stop ## gcCount <- function(line, st, sp){ chars = strsplit(as.character(line),"")[[1]] numGC = 0 for(j in st:sp){ ##nested ifs faster than an OR (|) construction if(chars[[j]] == "g"){ numGC <- numGC + 1 }else if(chars[[j]] == "G"){ numGC <- numGC + 1 }else if(chars[[j]] == "c"){ numGC <- numGC + 1 }else if(chars[[j]] == "C"){ numGC <- numGC + 1 } } return(numGC) } Running Rprof gives me the following output: > a = "GCCCAAAATTTTCCGGatttaagcagacataaattcgagg" > Rprof(filename="Rprof.out") > for(i in 1:500000){gcCount(a,1,40)}; > Rprof(NULL) > summaryRprof(filename="Rprof.out") self.time self.pct total.time total.pct "gcCount" 77.36 76.8 100.74 100.0 "==" 18.30 18.2 18.30 18.2 "strsplit" 3.58 3.6 3.64 3.6 "+" 1.14 1.1 1.14 1.1 ":" 0.30 0.3 0.30 0.3 "as.logical" 0.04 0.0 0.04 0.0 "as.character" 0.02 0.0 0.02 0.0 $by.total total.time total.pct self.time self.pct "gcCount" 100.74 100.0 77.36 76.8 "==" 18.30 18.2 18.30 18.2 "strsplit" 3.64 3.6 3.58 3.6 "+" 1.14 1.1 1.14 1.1 ":" 0.30 0.3 0.30 0.3 "as.logical" 0.04 0.0 0.04 0.0 "as.character" 0.02 0.0 0.02 0.0 $sampling.time [1] 100.74 Any advice for making this code faster?

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  • Managing dependencies with Hadoop Streaming?

    - by beagleguy
    hi all, had a quick hadoop streaming question.. If I'm using python streaming and I have python packages my mappers/reducers require that aren't installed by default do I need to install those on all the hadoop machines as well or is there some sort of serialization that sends them to the remote machines? thanks!

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  • Qt Audio Recording Question

    - by Cenoc
    This is sort of a follow-up/branch off a previous question, which still stands unresolved. Are there other codecs besides pcm for qt QAudio class? I cant seem to find any... I want to have a way of playing stuff recorded by qt on vlc. Thanks in advance.

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  • Java semaphore to syncronize printing to screen

    - by Travis Griswald
    I'm currently stuck on a bit of homework and was wondering if anyone could help - I have to use semaphores in java to syncronize printing letters from 2 threads - one printing "A" and one printing "B". I cannot print out more than 2 of the same character in a row, so output should look like AABABABABABBABABABABAABBAABBABABA At the moment I have 3 semaphores, a binary mutex set to 1, and a counting semaphore, and my thread classes look something like this - public void run() { while (true) { Time.delay(RandomGenerator.integer(0,20)); Semaphores.mutex.down (); System.out.println (produce()); if (printCount > 1) { printCount = 0; Semaphores.mutex.up (); Semaphores.printB.up(); } } } public String produce() { printCount++; return "A"; } public void run() { while (true) { Time.delay(RandomGenerator.integer(0,20)); Semaphores.mutex.down (); System.out.println (produce()); if (printCount > 1) { printCount = 0; Semaphores.mutex.up (); Semaphores.printA.up(); } } } public String produce() { printCount++; return "B"; } Yet whatever I try it either deadlocks, or it seems to be working only printing 2 in a row at most, but always seems to print 3 in a row every now and again! Any help is much appreciated, not looking code or anything just a few pointers if possible :)

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  • Wait function in Java

    - by user220755
    So I am writing a Java code to represent a heap sort and to represent the operation I need to have a waiting function which will wait between different operation but I am not sure if there is a function in Java that does that or do I need to write the function by myself and how would i do that. Representing heap sport is a homework but writing the waiting function isn't so I appreciate your help

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  • How do I accurately handle a batch seperator for SQL from C#

    - by Sam Saffron
    For Data Explorer I would like to add support for a Batch separator. So for example if users type in: select 'GO' go select 1 as go Go select 100 I would like to return the three result sets. Its clear that I need some sort of parser here, my hope is that this is a solved problem and I can just plug it in. (writing a full T-SQL parser is not something I would like to do) What component / demo code could achieve splitting this batch into its 3 parts?

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  • Python sorting problem

    - by matt
    I'm sure this is simple but I can't figure it out. I have a list of strings like this(after using sorted on it): Season 2, Episode 1: A Flight to Remember Season 2, Episode 20: Anthology of Interest I Season 2, Episode 2: Mars University Season 2, Episode 3: When Aliens Attack .... Season 3, Episode 10: The Luck of the Fryrish Season 3, Episode 11: The Cyber House Rules Season 3, Episode 12: Insane in the Mainframe Season 3, Episode 1: The Honking Season 3, Episode 2: War Is the H-Word How can I make them sort out properly? (by episode #, ascending)

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  • Protect flash video from download/right protect

    - by Smyles
    Is it possible to protect flv files from download? I'd like to protect my files from download but I don't have the money for a streaming server which I think provides some sort of protection. The files are streamed via PHP and are located in an upload folder on my server. I've used PHP to ensure that only subscribers can view the video but I basically want to go a step further and prevent subscribers from, upon login, downloading my videos with downloaders such as Sothink Flv Downloader for Firefox.

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  • Finding character in String in Vector.

    - by SoulBeaver
    Judging from the title, I kinda did my program in a fairly complicated way. BUT! I might as well ask anyway xD This is a simple program I did in response to question 3-3 of Accelerated C++, which is an awesome book in my opinion. I created a vector: vector<string> countEm; That accepts all valid strings. Therefore, I have a vector that contains elements of strings. Next, I created a function int toLowerWords( vector<string> &vec ) { for( int loop = 0; loop < vec.size(); loop++ ) transform( vec[loop].begin(), vec[loop].end(), vec[loop].begin(), ::tolower ); that splits the input into all lowercase characters for easier counting. So far, so good. I created a third and final function to actually count the words, and that's where I'm stuck. int counter( vector<string> &vec ) { for( int loop = 0; loop < vec.size(); loop++ ) for( int secLoop = 0; secLoop < vec[loop].size(); secLoop++ ) { if( vec[loop][secLoop] == ' ' ) That just looks ridiculous. Using a two-dimensional array to call on the characters of the vector until I find a space. Ridiculous. I don't believe that this is an elegant or even viable solution. If it was a viable solution, I would then backtrack from the space and copy all characters I've found in a separate vector and count those. My question then is. How can I dissect a vector of strings into separate words so that I can actually count them? I thought about using strchr, but it didn't give me any epiphanies.

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  • How can I view live MySQL queries?

    - by barfoon
    Hey all, I am just wondering if its possible to trace MySQL queries on my linux server as they happen? For example I'd love to set up some sort of listener, then request a web page and view all of the queries the engine executed, or just view all of the queries being run on a production server. Are there tools to do this? Thank you,

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  • How to set a sorting mode in Open Dialog

    - by Serg
    A user can manually sort files in a standard Windows Open Dialog (in "Details" view mode) by Name, Date or Size by clicking on the corresponding column header. How to set a sorting mode in Open Dialog (TOpenDialog class in Delphi) programmatically in application so that the dialog opens with a preferred sorting?

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  • how to use JComboBox using Enum in Dialog Box

    - by Edan
    Hi, I define enums: enum itemType {First, Second, Third}; public class Item { private itemType enmItemType; ... } How do I use it inside Dialog box using JComboBox? Means, inside the dialog box, the user will have combo box with (First, Second, Third). Also, is it better to use some sort of ID to each numerator? (Integer) thanks.

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  • What are possible designs for the DCI architecture?

    - by Gabriel Šcerbák
    What are possibles designs for implementation of the DCI (data, contexts, interactions) architecture in different OOP languages? I thought of Policy based design (Andrei Alexandrescu) for C++, DI and AOP for Java. However, I also thought about using State design pattern for representing roles and some sort of Template method for the interactions... What are the other possibilities?

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  • How do I accurately handle a batch separator for SQL from C#

    - by Sam Saffron
    For Data Explorer I would like to add support for a Batch separator. So for example if users type in: select 'GO' go select 1 as go Go select 100 I would like to return the three result sets. Its clear that I need some sort of parser here, my hope is that this is a solved problem and I can just plug it in. (writing a full T-SQL parser is not something I would like to do) What component / demo code could achieve splitting this batch into its 3 parts?

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  • Navigation graphics overlayed over video

    - by Hrishikesh Choudhari
    Hey, Imagine I have a video playing.. Can I have some sort of motion graphics being played 'over' that video.. Like say the moving graphics is on an upper layer than the video, which would be the lower layer.. I am comfortable in a C++ and Python, so a solution that uses these two will be highly appreciated.. Thank you in advance, Rishi..

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