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  • How can I deploy a Perl/Python/Ruby script without installing an interpreter?

    - by Brian G
    I want to write a piece of software which is essentially a regex data scrubber. I am going to take a contact list in CSV and remove all non-word characters and such from the person's name. This project has Perl written all over it but my client base is largely non-technical and installing Perl on Windows would not be worth it for them. Any ideas on how I can use a Perl/Python/Ruby type language without all the headaches of getting the interpreter on their computer? Thought about web for a second but it would not work for business reasons.

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  • Parse large XML file w/ script or use BioPython API ?

    - by jeremy04
    Hey guys this is my first question on here. I'm trying to make a local copy of the UniprotKB in SQL. The UniprotKB is 2.1GB, and it comes in XML and a special text format used by SwissProt Here are my options: 1) Use a SAX parser (XML) - I chose Ruby, and Nokogiri. I started writing the parser, but my initial reaction: how would I map the XML schema to the SAX parser? 2) BioPython - I already have BioSQL/Biopython installed, which literally created my SQL schema for me, and I was able to successfully insert one SwissProt/Uniprot txt file into the database. I'm running it right now (crosses fingers) on the entire 2.1gb. Here is the code I'm running: from Bio import SeqIO from BioSQL import BioSeqDatabase from Bio import SwissProt server = BioSeqDatabase.open_database(driver = "MySQLdb", user = "root", passwd = "", host="localhost", db = "bioseqdb") db = server["uniprot"] iterator = SeqIO.parse(open("/path/to/uniprot_sprot.dat", "r"), "swiss") db.load(iterator) server.commit() Edit: it's now crashing because the transactions are getting locked (since the tables are Innodb) Error Number: 1205 Lock wait timeout exceeded; try restarting transaction. I'm using MySQL version: 5.1.43 Should I switch my database to Postgrelsql ?

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  • .pl or .cgi for perl web script file,which one is more popular?

    - by Nano HE
    HI. I created two files 'hello.pl' and 'hello.cgi' with the code below. #!/usr/bin/perl print "Content-type:text/html\n\n"; print "hello world"; I can view the page via both http://www.mydomain.com/cgi-bin/hello.pl and http://www.mydomain.com/cgi-bin/hello.cgi. Which one is more sense in Perl web dev? BTW, the directory of 'cgi-bin' created by my VPS server, Do I need contact with my VPS support to remove it or just remain it like this URL style? Maybe http://www.mydomain.com/perDev/hello.cgi is better?

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  • How To Call Javascript In Ajax Response? IE: Close a form div upon success...

    - by B.Gordon
    I have a form that when you submit it, it sends the data for validation to another php script via ajax. Validation errors are echo'd back in a div in my form. A success message also is returned if validation passes. The problem is that the form is still displayed after submit and successful validation. I want to hid the div after success. So, I wrote this simple CSS method which works fine when called from the page the form is displayed on. The problem is that I cannot seem to call the hide script via returned code. I can return html like echo "<p>Thanks, your form passed validation and is being sent</p>"; So I assumed I could simply echo another line after that echo "window.onload=displayDiv()"; inside script tags (which I cannot get to display here)... and that it would hide the form div. It does not work. I am assuming that the problem is that the javascript is being returned incorrectly and not being interpreted by the browser... How can I invoke my 'hide' script on the page via returned data from my validation script? I can echo back text but the script call is ineffective. Thanks! This is the script on the page with the form... I can call it to show/hide with something like onclick="displayDiv()" while on the form but I don't want the user to invoke this... it has be called as the result of a successful validation when I write the results back to the div... function displayDiv() { var divstyle = new String(); divstyle = document.getElementById("myForm").style.display; if(divstyle.toLowerCase()=="block" || divstyle == "") { document.getElementById("myForm").style.display = "none"; } else { document.getElementById("myForm").style.display = "block"; } } PS: I am using the mootools.js library for the form validation if this matters for the syntax..

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  • Asking for input without stopping the script in python.

    - by ImTooStupidForThis
    I am (trying) to make a simple IRC client in python (as kind of a project while I learn the language). I have a loop that I use to receive and parse what the IRC server sends me, but if I use raw_input to input stuff, it stops the loop dead in its tracks until I input something (obviously). How can I input something without the loop stopping? Thanks in advance. (I don´t think I need to post the code, I just want to input something without the while 1 loop stopping.)

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  • How can I (from a script) add something to the zsh command history?

    - by Brandon
    I'd like to be able to look through my command history and know the context from which I issued various commands--in other words, "what directory was I in?" There are various ways I could achieve this, but all of them (that I can think of) would require manipulating the zsh history to add (for instance) a commented line with the result of $(pwd). (I could create functions named cd & pushd & popd etc, or I could use zsh's preexec() function and maybe its periodic() function to add the comment line at most every X seconds, just before I issue a command, or perhaps there's some other way.) The problem is, I don't want to directly manipulate the history file and bypass the shell's history mechanism, but I can't figure out a way (with the fc command, for instance) to add something to the history without actually typing it on the command line. How could I do this?

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  • Action Script 3 / Flex builder 3 : How to make a diagram.

    - by JePz
    Hi, I want to make a diagram with either flash CS4 or flex builder 3, don't know with one would be the best for the job. More about the task: I want to send in values external to the swf file. The swf-file takes the vaules and makes a diagram of it using x and y values. Any advise or tips of where i can make this is much appreciated! Thanks in advance! jesper

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  • Pulling name value pair from a structured adsense code block contained in a txt file

    - by Scott B
    I have a txt file which contains a google adsense code block and I'm trying to pull in the file via file_get_contents to extract the values of the google_ad_client and google_ad_slot variables. In the examples below, I want to return to my calling function: $google_ad_client = 'pub-1234567890987654'; $google_ad_slot = '1234567890' The file may contain one of either of these two formats and I wont know which the user has chosen: Newer Ad Unit Style <script type="text/javascript"><!-- google_ad_client = "pub-1234567890987654"; google_ad_slot = "1234567890"; google_ad_width = 336; google_ad_height = 280; //--> </script> <script type="text/javascript" src="path-to-google-script"></script> Classic Style <script type="text/javascript"><!-- google_ad_client = "pub-1234567890987654"; /* 336x280, created 8/6/09 */ google_ad_slot = "1234567890"; google_ad_width = 336; google_ad_height = 280; google_ad_format="336x280_as"; google_ad_type="text_image"; google_color_border="FFFFFF"; google_color_bg="FFFFFF"; google_color_link="2200CC"; google_color_url="000000"; google_color_text="777777"; //--> </script>

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  • How do I use google API within perl CGI script?

    - by stephenmm
    The google API example shows that you should have the javascript within the head tag but I am using perl module CGI and in there they suggest that you use "print header;" instead of writting out your headers explicitly. So if I want to use the perl CGI module and the google API javascript what is the correct way to do this? I tried writing out the header explicitly but It seemed like the perl module really wanted me to use the header method. It seems like this would be a common use case but I looked around the web for some examples of this and I could not find one. Any help would be appreciated.

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  • Initializing own plugins

    - by jgauffin
    I've written a few jquery plugins for my client. I want to write a function which would initialize each plugin which have been loaded. Example: <script src="/Scripts/jquery.plugin1.min.js")" type="text/javascript"></script> <script src="/Scripts/jquery.plugin2.min.js")" type="text/javascript"></script> <script src="/Scripts/jquery.initializer.min.js")" type="text/javascript"></script> Here I've loaded plugin1 and plugin2. Plugin1 should be attached to all links with class name 'ajax' and plugin2 to all divs with class name 'test2': $('document').ready(function(){ $('a.ajax').plugin1(); $('div.test2').plugin2(); } I know that I can use jQuery().pluginName to check if a plugin exists. But I want to have a leaner way. Can all loaded plugins register a initialize function in an array or something like that which I in document.ready can iterate through and invoke? like: //in plugin1.js myCustomPlugins['plugin1'] = function() { $('a.ajax').plugin1(); }; // and in the initializer script: myCustomPlugins.each(function() { this(); }; Guess it all boiled down to three questions: How do I use a jquery "global" array? How do I iterate through that array to invoke registered methods Are there a better approach?

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  • Is there a script that would allow me to edit multiple files as if they are one file in VIM?

    - by somewire
    I prefer to edit in one large file rather than many independent files, but due to limitations in languages, source control, and the preference of team mates I need to output to many files. What I'm looking for would recurse through all the files in a source directory and generate a single file to edit in VIM, with special file seperator markers. On save it would save the the changes to the correct file(s) ideally in a smart manner, based only on changes made. Does something like this exist?

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