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  • Can GraphViz be used for a graph editing GUI?

    - by user185420
    I am creating an application which will allow a developer to create a program flow-chart by selecting pre-defined functions from a ToolBox (which will show up as small graphical elements). In other words, developer will select one or more pre-defined functions (graphical elements) from ToolBox and drag-drop on the main work area. The application will then, based on the flow of functions selected, will auto-generate ready-to-compile-code. I looked a GraphViz, but am not sure whether it can be used to create a GUI IDE for editing graphical elements. I am looking for a functionality similart to Microsoft Visio, where users can add/remove/drag-drop/ various shapes to create a diagram. Does GraphViz fit in here? If yes, can you direct me to some examples showing how to do it? If GraphViz cannot be used, what are the other open source/free components available? I am intending to build the final application in .Net.

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  • How to "check for overwide node(s)." in graphviz dot file

    - by Tomas Forsman
    I'm trying to generate a large graph using graphviz. I have a generated text file with nodes defined in the dot format. When I try to generate a PNG file from the file using dot -Tpng:cairo graph.txt graph.png I get the error message: Error: Edge length 136228 larger than maximum 65535 allowed. Check for overwide node(s). How do I actually "check for overwide node(s)" ?

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  • Installing PyGraphViz on Windows, Python 2.7

    - by user574043
    I can't install pygraphviz on Windows XP. I'm using Python27. Before to launch the setup I've changet these two variables of the setup.py file library_path="C:\\Archivos de programa\\Graphviz 2.28\\bin" include_path="C:\\Archivos de programa\\Graphviz 2.28\\include\\graphviz" Then I've launched the setup. I'm using mingw32 as a compiler. I don't know what can I do now. I'm using the following command: C:\Python27\pygraphviz-1.1>c:\python27\python setup.py build -c mingw32 And I've got the folling result library_path=C:\Archivos de programa\Graphviz 2.28\bin include_path=C:\Archivos de programa\Graphviz 2.28\include\graphviz running build running build_py running build_ext building 'pygraphviz._graphviz' extension C:\MinGW\bin\gcc.exe -mno-cygwin -mdll -O -Wall "-IC:\Archivos de programa\Graphviz 2.28\include\graphviz" -Ic:\python27\include -Ic:\python 27\PC -c pygraphviz/graphviz_wrap.c -o build\temp.win32-2.7\Release\pygraphviz\graphviz_wrap.o pygraphviz/graphviz_wrap.c: In function 'agattr_label': pygraphviz/graphviz_wrap.c:2855:5: warning: return makes integer from pointer without a cast writing build\temp.win32-2.7\Release\pygraphviz\_graphviz.def Traceback (most recent call last): File "setup.py", line 146, in <module> package_data = package_data File "c:\python27\lib\distutils\core.py", line 152, in setup dist.run_commands() File "c:\python27\lib\distutils\dist.py", line 953, in run_commands self.run_command(cmd) File "c:\python27\lib\distutils\dist.py", line 972, in run_command cmd_obj.run() File "c:\python27\lib\distutils\command\build.py", line 127, in run self.run_command(cmd_name) File "c:\python27\lib\distutils\cmd.py", line 326, in run_command self.distribution.run_command(command) File "c:\python27\lib\distutils\dist.py", line 972, in run_command cmd_obj.run() File "c:\python27\lib\distutils\command\build_ext.py", line 340, in run self.build_extensions() File "c:\python27\lib\distutils\command\build_ext.py", line 449, in build_extensions self.build_extension(ext) File "c:\python27\lib\distutils\command\build_ext.py", line 531, in build_extension target_lang=language) File "c:\python27\lib\distutils\ccompiler.py", line 741, in link_shared_object extra_preargs, extra_postargs, build_temp, target_lang) File "c:\python27\lib\distutils\cygwinccompiler.py", line 260, in link target_lang) File "c:\python27\lib\distutils\unixccompiler.py", line 218, in link libraries) File "c:\python27\lib\distutils\ccompiler.py", line 1121, in gen_lib_options opt = compiler.runtime_library_dir_option(dir) File "c:\python27\lib\distutils\unixccompiler.py", line 285, in runtime_library_dir_option compiler = os.path.basename(sysconfig.get_config_var("CC")) File "c:\python27\lib\ntpath.py", line 198, in basename return split(p)[1] File "c:\python27\lib\ntpath.py", line 170, in split d, p = splitdrive(p) File "c:\python27\lib\ntpath.py", line 125, in splitdrive if p[1:2] == ':': TypeError: 'NoneType' object is not subscriptable Any idea on how to solve it over windows? In other computer with Ubuntu I've installed without problems.

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  • Why is graphviz drawing two arrows, and using a weird order?

    - by dmd
    Why is graphviz drawing two arrows from uncap_spike to peel, and why is it drawing peel to the right of hang? I want uncap_spike - peel - hang - spike, in that order, with one edge between each. digraph hangers { compound=true fontname="Gill Sans" node [fontname="Gill Sans" shape=box fillcolor=white style="rounded, filled"] edge [fontname="Gill Sans"] subgraph cluster_prep { style="filled" label=Prep gather [shape=Mrecord label="{gather | EtOH swab\nvented tubing}"] uncap_bottle [label="uncap bottle"] uncap_spike [label="uncap spike"] swab [shape=Mrecord label="{swab EtOH | wait 30 seconds for sterility}"] gather -> uncap_bottle -> swab -> uncap_spike {rank=same gather uncap_bottle swab uncap_spike} } subgraph cluster_hang { style=filled label=Hang {rank=same peel hang} } {rank=same uncap_spike -> peel -> hang -> spike -> prime} hang -> rip [color=firebrick] rip [label="eyelet\nripped" style="filled" shape=octagon regular fontcolor=white fontsize=10 width=.5 fixedsize color=firebrick fillcolor=firebrick ] swab -> not_sterile [color=firebrick] not_sterile [label="not\nsterile" style="filled" shape=octagon regular fontcolor=white fontsize=10 width=.5 fixedsize color=firebrick fillcolor=firebrick ] }

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  • Do these 3 crashes have something in common?

    - by David U
    I'm running OS X 10.6.8 on a Mac Mini. I tried to install 3 applications today and all 3 installations failed. I am wondering if the failures have something in common. First I installed GraphViz. The installation succeeded, but when I try to open any .dot file, I get a dialog that says GraphViz has quit unexpectedly. Next I installed Doxygen. It installed, but when I try to launch it I get a dialog that tells me Doxywizard quit unexpectedly. After some googling I thought perhaps my system lacked QT, and that was the problem. I downloaded the Qt 4.8.4 packages and installed them. But when I try to launch qtdemo.app, or any of the other apps that came with the qt installation, I get a dialog that says I can't open the app because it's not supported on this type of Mac. I have crash logs from GraphViz and Doxygen. They're long and I think it unnecessary to post them unless they would help someone determine my problem. Thanks Excerpt from System Log, added later: 12/13/12 5:26:21 PM [0x0-0x4f04f].com.apple.DiskImageMounter[1322] 2012-12-13 17:26:21.927 DiskImages UI Agent[1333:903] *** -[NSMachPort handlePortMessage:]: dropping incoming DO message because the connection or ports are invalid 12/13/12 5:30:31 PM [0x0-0x1a01a].org.mozilla.firefox[824] [ConvConfHandler] isPreferred contentType: application/x-apple-diskimage 12/13/12 5:35:32 PM DiskImages UI Agent[1384] *** -[NSMachPort handlePortMessage:]: dropping incoming DO message because the connection or ports are invalid 12/13/12 5:35:32 PM [0x0-0x5a05a].com.apple.DiskImageMounter[1376] 2012-12-13 17:35:32.988 DiskImages UI Agent[1384:903] *** -[NSMachPort handlePortMessage:]: dropping incoming DO message because the connection or ports are invalid 12/13/12 6:07:33 PM DisplayLinkUserAgent[772] (00116500.405)-[DLDistributedNotificationCenter stream:handleEvent:] reconnected. 12/13/12 6:07:33 PM [0x0-0x6c06c].backupd-helper[1446] Not starting Time Machine backup after wake - less than 60 minutes since last backup completed. 12/13/12 6:08:43 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/BrotherPPD.pkg 12/13/12 6:08:48 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/NeoOffice-2.2.3-Intel.pkg 12/13/12 6:08:48 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/NeoOffice-2.2.3-Patch-2-Intel.pkg 12/13/12 6:08:48 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/NeoOffice-2.2.5-Intel.pkg 12/13/12 6:08:48 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/NeoOffice.pkg 12/13/12 6:08:48 PM Installer[1403] PackageKit: *** Missing bundle identifier: /Library/Receipts/PIXMA iP6000D 290.pkg 12/13/12 6:14:39 PM com.apple.launchd.peruser.501[359] ([0x0-0x70070].com.att.graphviz[2047]) Job appears to have crashed: Bus error 12/13/12 6:14:41 PM ReportCrash[2056] Saved crash report for Graphviz[2047] version 2.28 (2.28.0) to /Users/duzzell/Library/Logs/DiagnosticReports/Graphviz_2012-12-13-181441_Amun.crash 12/13/12 6:15:19 PM com.apple.launchd.peruser.501[359] ([0x0-0x74074].org.doxygen[2070]) Job appears to have crashed: Bus error 12/13/12 6:15:19 PM ReportCrash[2056] Saved crash report for Doxywizard[2070] version 1.8.2 (???) to /Users/duzzell/Library/Logs/DiagnosticReports/Doxywizard_2012-12-13-181519_Amun.crash

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  • Warning in image_graphviz

    - by garcon1986
    Hello, I have got a warning in image_graphviz, i have viewed a post, who has a similar error. I have installed pear image_graphviz package(Image_GraphViz-1.2.1), I also installed graphviz.msi(Graphviz2.25.msi) in windows(But i don't know if does something with image_graphviz and if it does have some effects when i use image_graphviz). Do i need to do something else? Here is my code from pear image_graphviz site. <?php require_once 'Image/GraphViz.php'; error_reporting(E_ALL ^ E_NOTICE); //Added E_NOTICE $gv = new Image_GraphViz(); $gv->addEdge(array('wake up' => 'visit bathroom')); $gv->addEdge(array('visit bathroom' => 'make coffee')); $gv->image(); ?> This is the warning: Warning: fopen(C:\WINDOWS\Temp\gra50.tmp.svg) [function.fopen]: failed to open stream: No such file or directory in C:\wamp\bin\php\php5.3.0\PEAR\Image\GraphViz.php on line 210 Notice: Undefined variable: data in C:\wamp\bin\php\php5.3.0\PEAR\Image\GraphViz.php on line 218 Thanks Pekka Gaiser, I used error_reporting(E_ALL ^ E_NOTICE);. I don't know how to change the temp directory, but c:/windows/temp exists in my computer. I haven't solve the problem. Thanks all for advice.

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  • subgraph cluster ranking in dot

    - by Chris Becke
    I'm trying to use graphviz on media wiki as a documentation tool for software. First, I documented some class relationships which worked well. Everything was ranked vertically as expected. But, then, some of our modules are dlls, which I wanted to seperate into a box. When I added the nodes to a cluster, they got edged, but clusters seem to have a LR ranking rule. Or being added to a cluster broke the TB ranking of the nodes as the cluster now appears on the side of the graph. This graph represents what I am trying to do: at the moment, cluster1 and cluster2 appear to the right of cluster0. I want/need them to appear below. <graphviz> digraph d { subgraph cluster0 { A -> {B1 B2} B2 -> {C1 C2 C3} C1 -> D; } subgraph cluster1 { C2 -> dll1_A; dll1_A -> B1; } subgraph cluster2 { C3 -> dll2_A; } dll1_A -> dll2_A; } </graphviz>

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  • Piping the output of a program to Preview.app

    - by Abhay Buch
    I'm using an application (the dot program of the graphviz library) that generates a wide variety of file formats including PostScript and PDF. It can send the result to stdout or to a file. I'm currently sending it to a file and opening it with Preview. Is there any way to pipe the output and have it be read by Preview, so that I'd don't have to generate a file and have it lying around? This is going to be used by a number of people who won't know the internal structure of the generating script and I don't want to clutter their folders or complicate their lives. More generally, is there any way to take a program that sends its output to stdout and pass that output to an program that usually takes it's input from a file, without actually creating a file?

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  • Installing PygraphViz on Windows, Python 2.6

    - by jbochi
    Anybody out there has successfully installed PygraphViz on Windows? Since there is not an official release for Windows, I'm trying to build it myself, but it fails to compile. I'm not the first one to face this issue, but I could not find an answer. This is the console output: C:\Python26\Lib\site-packages\pygraphviz-0.99.1>c:\python26\python.exe setup.py install library_path=C:/Program Files/Graphviz2.26.3/lib/debug/dll include_path=C:/Program Files/Graphviz2.26.3/include/graphviz running install running build running build_py running build_ext building 'pygraphviz._graphviz' extension C:\Program Files\Microsoft Visual Studio 9.0\VC\BIN\cl.exe /c /nologo /Ox /MD /W 3 /GS- /DNDEBUG "-IC:/Program Files/Graphviz2.26.3/include/graphviz" -Ic:\python 26\include -Ic:\python26\PC /Tcpygraphviz/graphviz_wrap.c /Fobuild\temp.win32-2. 6\Release\pygraphviz/graphviz_wrap.obj graphviz_wrap.c warning: I don't know what to do with 'runtime_library_dirs': ['C:/Program Files /Graphviz2.26.3/lib/debug/dll'] error: don't know how to set runtime library search path for MSVC++ Any help would be appreciated!

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  • Simple question about image_graphviz

    - by garcon1986
    Hello, I'm trying to display the example of image_graphviz Here, but it doesn't display anything in my page. Here is my page: test.php <?php require_once 'Image/GraphViz.php'; $gv = new Image_GraphViz(); $gv->addEdge(array('wake up' => 'visit bathroom')); $gv->addEdge(array('visit bathroom' => 'make coffee')); $gv->image(); ?> I think there is something wrong with the path, and then i use the absolute path which is "C:/wamp/bin/php/php5.3.0/PEAR/Image/GraphViz.php". But it doesn't work too. Is there something wrong? Do you have any idea? Thanks a lot.

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  • Drawing reflexive edges in State Machines

    - by reforged
    I have to draw a small finite state machine that has some reflexive transitions (meaning the start and the end state of the transition are equal. The problem is that rendering that in Graphviz has ugly results. digraph finite_state_machine { edge [fontsize=11]; S0 - S0 [label = "td=1\n-/e2"]; S0 - S1 [label = "td=3 \n-/e3" ]; S1 - S0 [label = "td=3\n-/-\nt=0"]; S0 - S2 [label = "P:i1/e4"]; S2 - S0 [label = "td=0\n-/-" ]; S0 - S0 [label = "i1/e1\ntd+=1"]; } Is there a way to make this look a little better? BTW: I tried head/tailport but they don't work on my version of Graphviz (1.13 on Mac OS X) I am not limited to the dot engine, I only want a nice looking graph and don't care about the renderer/language. Thanks a lot

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  • How to generate function call graphs for JavaScript?

    - by Jeremy Rudd
    Are there softwares that can generate graphs that show which functions call which functions? I need to analyze JavaScript source code, a language which Doxygen/Graphviz does not support, though it does support C++ and others. If there are no tools that support JavaScript out-of-the-box, is there a way to convert JS to C++ so I can use Doxygen itself?

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  • How to generate Function caller graphs for other languages?

    - by Jeremy Rudd
    I like the way Doxygen combines with Graphviz dot to generate function caller graphs. I'd like this functionality for other languages as well, apart from the basics that Doxygen supports (C++, C, Java, Objective-C, Python, VHDL, PHP, C#). I'm currently interested in JavaScript, ActionScript 2 and ActionScript 3/Flex but am looking for ways or tools that have a wider language support than Doxygen. Is there any way to get function caller graphs for any other languages?

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  • How to generate Function caller graphs for JavaScript and ActionScript?

    - by Jeremy Rudd
    I like the way Doxygen combines with Graphviz dot to generate function caller graphs. I'd like this functionality for other languages as well, apart from the basics that Doxygen supports (C++, C, Java, Objective-C, Python, VHDL, PHP, C#). I'm currently looking for tools that support JavaScript, ActionScript 2 and ActionScript 3/Flex. I'm also interested in tools that have a wider language support than Doxygen. Is there any way to get function caller graphs for any other languages?

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  • How to draw a better looking Graph (A4 size) in Dot?

    - by Nazgulled
    Hi, I have this project that it's due in a few hours and I still have a report to write... The project has nothing to do with Dot, but we were asked to draw a Graph with Dot, which I did. It looks something like this: http://img683.imageshack.us/img683/9735/dotj.jpg The longer arrows represent smaller weights and the shorter arrows represent bigger weights. There isn't any problem in submitting my project like this, it does what's is supposed to do and this Dot thing is just an extra. But I would like to make it pretty, I just don't have time to learn about Dot right now. Basically, all I want is make pretty. Perhaps, a bigger height for the page, like A4 paper size. And have the graph display more to the bottom than everything to the side. What should I put on my .dot file to make it look better?

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  • How can I direct edge to get out of the diamond on the right?

    - by Didier Trosset
    I have a simple dot diagram to show how to perform tests. PerformTests; PerformTests<---+ PerformTests -> TestsPassed; | | TestsPassed [shape="diamond"]; v | TestsPassed -> Release [label="Yes"]; TestsPassed | TestsPassed -> FixErrors [label="No"]; Y| N\ | FixErrors -> PerformTests; v FixErrors Release The diagram shows square boxes for all nodes, except TestPassed that has a diamond shape. My issue is here. I'd like the edge that goes outside of the diamond for No to be getting out of the diamond at the right (east) instead of oblique down-right (south-east). What I have What I want ^ ^ / \ / \ < > < >---> \ /\ \ / v \ v I've seen such compass_pt in the dot grammar, but cannot figure out how to use it. I what I want possible, and how to do it?

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  • GUI editor for DOT language (Mac OS)

    - by Saff
    Hi, i have a problem. I need to create pure diagram for my project (Django). I use django-extensions to generate DOT diagram. Diagram is very pure, but now i want to add for example comments on this diagram. It is possible to do this? Maybe anyone can advise me some software for this?

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  • Problem with graphiz on Unix

    - by J3n
    When I'm on Unix, my graphs with graphphiz are less nice. The tail or the head of the edge is not always linked to the boundary of the port. You can see the result here : http://www.freeimagehosting.net/image.php?59d8eb4b30.jpg <xsl:value-of select="$source"/>:<xsl:value-of select="$prot"/> -&gt; <xsl:value-of select="$destination"/>:<xsl:value-of select="$prot"/>[color="black",label="<xsl:value-of select="$prot"/>",fontcolor="black",tailclip=true,headclip=true];

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  • how use graphvis in C# application?

    - by ghasedak -
    i have a dot format file and i download graphvis for windows now how can i use graphvis to show a graph in my c# application? using System; using System.Collections.Generic; using System.ComponentModel; using System.Data; using System.Drawing; using System.Linq; using System.Text; using System.Windows.Forms; using VDS.RDF; using VDS.RDF.Parsing; using VDS.RDF.Query; using System.IO; using System.Windows; using System.Runtime.InteropServices; using VDS.RDF.Writing; using System.Diagnostics; namespace WindowsFormsApplication2 { public partial class first : Form { Graph g = new Graph(); string s1 = null; /**************************************DATA********************************************/ public first() { InitializeComponent(); } private void button1_Click(object sender, EventArgs e) { Stream myStream = null; var parser = new Notation3Parser(); var graph = new Graph(); OpenFileDialog openFileDialog1 = new OpenFileDialog(); openFileDialog1.Filter = "RDF files (*.n3)|*.n3"; openFileDialog1.FilterIndex = 1; openFileDialog1.RestoreDirectory = true; openFileDialog1.Multiselect = false; if (openFileDialog1.ShowDialog() == DialogResult.OK) { try { if ((myStream = openFileDialog1.OpenFile()) != null) { using (myStream) { string s = openFileDialog1.FileName.ToString(); string w= Directory.GetCurrentDirectory().ToString(); string Fname = openFileDialog1.SafeFileName.ToString(); File.Copy(s,Path.Combine(w,Fname),true); // Insert code to read the stream here. Win32.AllocConsole(); s1 = Path.Combine(w, Fname); insertNodeButton.Visible = true; delBut.Visible = true; simi.Visible = true; showNodes showNodes1 = new showNodes(s1); g = showNodes1.returngraph(); Console.Read(); Win32.FreeConsole(); // g.SaveToFile("firstfile.n3"); this.Show(); } } } catch (Exception ex) { MessageBox.Show("Error: Could not read file from disk. Original error: " + ex.Message); } } GraphVizWriter hi = new GraphVizWriter(); hi.Save(g, "c:\\ahmad.dot"); } private void button2_Click(object sender, EventArgs e) { string strCmdLine = Application.StartupPath + "\\Tools\\rdfEditor.exe"; //string strCmdLine = "DIR"; MessageBox.Show(strCmdLine); System.Diagnostics.Process process1; process1 = new System.Diagnostics.Process(); //Do not receive an event when the process exits. process1.EnableRaisingEvents = false; //The "/C" Tells Windows to Run The Command then Terminate System.Diagnostics.Process.Start(strCmdLine); process1.Close(); } private void Form1_Load(object sender, EventArgs e) { } private void insertNodeButton_Click(object sender, EventArgs e) { //Graph parentvalue = this.g; //String parentvalueadress = this.s1; addTriple a1 = new addTriple(); a1.G = g; a1.BringToFront(); a1.ShowDialog(); g = a1.G; g.SaveToFile("c:\\Hi.n3"); } this is my code i want to visul saly dot file format to show a graph with graphvis

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  • Graphiz: how to set 'default' arrow style?

    - by sdaau
    Hi all, Consider this dot language code: digraph graphname { subgraph clusterA { node [shape=plaintext,style=filled]; 1 -> 2 [arrowhead=normal,arrowtail=dot]; 2 -> 3 -> X2 -> 5; 6; 7; label = "A"; color=blue } } In the above example, only the 1 -> 2 connection will have the arrowhead=normal,arrowtail=dot style applied; all the other arrows will be of the "default" style. My question is - how do I set the arrow style (for the entire subgraph - or for the entire graph), without having to copy paste "[arrowhead=normal,arrowtail=dot];" next to each edge connection? Thanks in advance, Cheers!

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  • python: os.system does not execute shell comand

    - by capoluca
    I need to execute shell command in python program (I have ubuntu). More specifically I want to create graph using graphviz in python script. My code is os.system("dot -Tpng graph.dot -o graph.png") It does not work, but if I just type dot -Tpng graph.dot -o graph.png in command line then everything is fine. Do you know what the problem? Thank you! Edit: Does not work means that nothing happens, there are no errors. Output from dot -v -Tpng graph.dot -o graph.png: dot - graphviz version 2.26.3 (20100126.1600) Activated plugin library: libgvplugin_pango.so.6 Using textlayout: textlayout:cairo Activated plugin library: libgvplugin_dot_layout.so.6 Using layout: dot:dot_layout Using render: cairo:cairo Using device: png:cairo:cairo The plugin configuration file: /usr/lib/graphviz/config6 was successfully loaded. render : cairo dot fig gd map ps svg tk vml vrml xdot layout : circo dot fdp neato nop nop1 nop2 osage patchwork sfdp twopi textlayout : textlayout device : canon cmap cmapx cmapx_np dot eps fig gd gd2 gif gv imap imap_np ismap jpe jpeg jpg pdf plain plain-ext png ps ps2 svg svgz tk vml vmlz vrml wbmp x11 xdot xlib loadimage : (lib) eps gd gd2 gif jpe jpeg jpg png ps svg

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