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• Bioperl, equivalent of IO::ScalarArray for array of Seq objects?

  - by Ryan Thompson

  In perl, we have IO::ScalarArray for treating the elements of an array like the lines of a file. In BioPerl, we have Bio::SeqIO, which can produce a filehandle that reads and writes Bio::Seq objects instead of strings representing lines of text. I would like to do a combination of the two: I would like to obtain a handle that reads successive…

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• Use an Array to Cycle Through a MySQL Where Statement

  - by Ryan

  I'm trying to create a loop that will output multiple where statements for a MySQL query. Ultimately, my goal is to end up with these four separate Where statements: `fruit` = '1' AND `vegetables` = '1' `fruit` = '1' AND `vegetables` = '2' `fruit` = '2' AND `vegetables` = '1' `fruit` = '2' AND `vegetables` = '2' My theoretical code is…

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• Jquery Drag-Drop (Getting element being dropped into)

  - by Ryan

  I am trying to detect which cell an object is being dropped into. <table> <tr> <td class="weekday">Sun</td> <td class="weekday">Mon</td> <td class="weekday">Tue</td> <td class="weekday">Wed</td> <td class="weekday">Thu</td> <td class="weekday">Fri</td>…

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• bash: assign grep regex results to array

  - by Ryan

  Hello everyone, I am trying to assign a regular expression result to an array inside of a bash script but I am unsure whether that's possible, or if I'm doing it entirely wrong. The below is what I want to happen, however I know my syntax is incorrect: indexes[4]=$(echo b5f1e7bfc2439c621353d1ce0629fb8b | grep -o '[a-f0-9]\{8\}') …

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• Rails Heroku Migrate Unknown Error

  - by Ryan Max

  Hello. I am trying to get my app up and running on heroku. However once I go to migrate I get the following error: $ heroku rake db:migrate rake aborted! An error has occurred, this and all later migrations canceled: 530 5.7.0 Must issue a STARTTLS command first. bv42sm676794ibb.5 (See full trace by running task with --trace)…

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• How can I save BioPerl sequence nested features in genbank or embl format?

  - by Ryan Thompson

  In BioPerl, a sequence object can have any number of features, and each of these can have subfeatures nested within them. For example, a feature may be a complete coding sequence of a gene, and its subfeatures might be individual exons that are concatenated to form the full coding sequence. However, when I use BioPerl to write a…

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• HTML checkbox field is being passed to PHP as checked even when it is not

  - by Ryan

  Hello all, First of all thanks in advance, this has been very frustrating and I'm hoping someone can see something I'm not, I am definitely no php expert. Well here' what is going on. I have a form where I have a checkbox for people to opt in to our newletter. The form element looks like this: <label for=newsletter…

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• EasyXDM passing data issue

  - by Jeff Ryan

  I'm using rpc with XDM, and I can send simple data back and forth easily between child and parent window. But it seems to be limited to simple strings and numbers. The demos on the site only use numbers. When I try to send a json ecoded string, I get a cross domain error. When I use cors, I can make ajax requests…

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• How can I get latency info from Android's AudioTrack class?

  - by Ryan

  I've noticed that the C++ classes underlying the AudioTrack and AudioRecord APIs in Android both have a latency() method that is not exposed via JNI. As far as I can see, the latency() method in AudioRecord still does not take into account the hardware latency (they have a TODO comment for that), but the latency()…

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• ASP.NET Canceling the Default Submit Button

  - by Ryan Smith

  I have an ASP.NET application where there's a few ASP.NET buttons and several plain HTML buttons. Anytime there's a textbox where a user hits enter, the ASP.NET button trys to submit the form. I know I can change the defaultButton, but I don't want there to be any default button. I just want it so when the user…

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• Dual slider control with custom skin

  - by Ryan French

  Hi All, I'm currently trying to create a page for users to select two points from a range, using a slide control. The first point in the range is when an alert will be sent to the user, the second point is a max limit. What I would like to do is have the bar colored green from the 0 point to the first slider…

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• How do I insert an input's value into a separate form?

  - by ryan

  I'm making a tool for my university that allows students to create a list of classes by doing the following: Searching by course title for their course via an autocomplete input field. Adding that course to a separate form that upon being submitted creates a course list. I am trying to link the…

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• FormsAuthentication redirecting to login page when visiting root of website

  - by Ryan Lattimer

  I wanted to use FormsAuthentication to secure my static files as well on my site, so I followed the instructions located here http://learn.iis.net/page.aspx/244/how-to-take-advantage-of-the-iis7-integrated-pipeline/ under title "Enabling Forms Authentication for the Entire Application". Now…

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• Intercepting hyperlinks in an embedded Word document

  - by Ryan

  Hello, I'm working on an app which uses embedded Word documents. We have a feature which allows them to insert a small clickable image into the doc - when the user clicks on it, we want the app to open another window based on some data specified by the user when the image was added. What the…

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• Wondering about a way to conserve memory in C# using List<> with structs

  - by Michael Ryan

  I'm not even sure how I should phrase this question. I'm passing some CustomStruct objects as parameters to a class method, and storing them in a List. What I'm wondering is if it's possible and more efficient to add multiple references to a particular instance of a CustomStruct if a…

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• Directly call distutils' or setuptools' setup() function with command name/options, without parsing

  - by Ryan B. Lynch

  I'd like to call Python's distutils' or setuptools' setup() function in a slightly unconventional way, but I'm not sure whether distutils is meant for this kind of usage. As an example, let's say I currently have a 'setup.py' file, which looks like this (lifted verbatim from the…

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• DataView.RowFilter an ISO8601

  - by Ryan

  I have a DataTable (instance named: TimeTable) whose DefaultView (instance named: TimeTableView) I am trying to use to filter based on a date. Column clock_in contains an ISO8601 formatted string. I would like to select all the rows in this DataTable/DefaultView between…

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• Multiple Jquery modal Dialog Boxes in one page?

  - by Ryan Max

  Hi, I am brand stinking new to jquery and attempting to have a "Services" page for a tech website I am working on. I am having trouble with different services opening the same info in the window. Basically I am using the code straight from the demo. Any ideas on how…

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• jQuery XML loading and then innerfade effect

  - by Ryan Max

  Hello, I think I can explain myself without code, so for brevity's sake here we go: I am using jquery to pull data from an xml and put it into a ul on the page with each xml entry as a li. This is working great! However, what I am trying to do afterwards is use the…

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• How do I catch generic fault exceptions in Fitnesse?

  - by Dan Ryan

  Previously within my Fitnesse fixture I was specifying an expected WCF exception using: exception[FaultException] Since then I have converted the WCF service to return a strongly typed FaultContract. I am now getting the following failure message: …

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• Creating a Large Matrix in ff

  - by Ryan Rosario

  I am trying to create a huge matrix in ff, and I know that ff is good for this sort of thing. But, there is a major problem. The dimensions of the matrix exceed .Machine$max_integer! I am running on a 64 bit machine, using 64bit R and 64bit ff. Is…

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• Access to Perl's empty angle "<>" operator from an actual filehandle?

  - by Ryan Thompson

  I like to use the nifty perl feature where reading from the empty angle operator <> magically gives your program UNIX filter semantics, but I'd like to be able to access this feature through an actual filehandle (or IO::Handle object, or…

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• BlueJ Chpt 4 - Auction Project - How to make removeLot method work after entering a new lot

  - by Ellaine Ryan

  Hi All I am learning Java through BlueJ I would like to add a removeLot method to the Auction Class in BlueJ Chpt 4. This involves also returning the lot with the given number or null if there is no such lot. If you enter , say 5 lots and…

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• Showing renames in hg status?

  - by Ryan Thompson

  I know that Mercurial can track renames of files, but how do I get it to show me renames instead of adds/removes when I do hg status? For instance, instead of: A bin/extract-csv-column.pl A bin/find-mirna-binding.pl A…

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• jQuery Validation Plugin - Enable 'Eager' Validation only after and Invalid Submit

  - by Ryan Fitzer

  By default, if a user enters a value in a field, the 'eager' validation kicks in. Is there any way to disable 'eager' validation before submit and then enable it after an invalid submit has happened? I've used…

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