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• Investigating a potential CPU failure

  - by Jernej

  On a Ubuntu server that I am using for computations I have recently observed that some CPU extensive programs (GUROBI,CPLEX) often segfault. Being in correspondence with tech support of the respective programs I was suggested that it may be a hardware issue. The administrator of the server performed a detailed memtest and it turned out that the RAM modules appear to be fine. Hence I've used the tool mprime to test the CPU and the following two lines appear multiple times durring the execution of the stress tests: [Worker #4 Oct 18 18:47] FATAL ERROR: Rounding was 0.498046875, expected less than 0.4 [Worker #4 Oct 18 18:47] Hardware failure detected, consult stress.txt file. The stress.txt file in itself is not very verbose about what could be the cause of this error so I would like to ask whether anyone here happens to know what could be the cause of this issue? Is there some other test I could perform to nail the problem even further? The temperature of the system (and all cores) was fine during the entire stress test (+69.0°C (high = +80.0°C, crit = +98.0°C)) the CPU in question is a Intel Core i7-2600K CPU @ 3.40GHz and is not overclocked or modified in any way. Also what is interesting that if I run mprime to only stress the CPU all tests pass fine. The error is only triggered when I let mprime stress the CPU+RAM.

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• Interactive console based CSV editor

  - by Penguin Nurse

  Although spreadsheet applications for editing CSV files on the console used to be one of the earliest killer applications for personal computers, only few of them and even less documentation about them is still actively maintained. After having done extensive search on the web, manpages and source code, I ended up with the following three applications that all have fundamental drawbacks: sc: abbrev. for spreadsheet calculator; nice tool with vi keybings, but it does not put strings containing the delimiter into quotas when exporting to delimiter separated format and can't import csv files correctly, i.e. all numbers are interpreted as strings GNU oleo: doesn't seem to be actively maintained any longer since 2001 and there are therefore no packages for major linux distributions teapot: offers packages for various operating systems, but uses for example counter-intuitive naming for cells (numbers for row and column, i.e. 11 seems to be intended to be row 1, column 1) and superfluous code for FLTK GUI Various Emacs modes also do not quote strings containing the delimiter well or are require much more typing for entering the scaffold of a table. Therefore I would be very grateful for overcoming one of theses drawbacks or any hints towards another console based CSV editor. It actually needn't do any calculations just editing cells or column- and rowise.

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• Processing-time billing in Amazon EC2

  - by Rafael Almeida

  Hi all! I think my question is fairly basic, but I would like a clarification: in the Pricing part of AWS we can see that Amazon charges people around .10 by the 'instance computing hour'. I've seen in a blog post somewhere (can't remember where exactly, and even if I did I think it was in Portuguese anyway) that this way your minimum monthly payment would be $72 (= .10 $s/hour x 24 hours x 30 days). Is this correct? (I don't think it is!) In my understanding is that this 'virtual computing time' is only used when your machine is actually doing something (serving pages, serving the admin via ssh, whatever), so real billable usage would be less than 720 hours/month in most webserver scenarios. Is my view correct? If it is, then it leads me to another question: is it economically interesting to buy access to one of these instances for testing? I mean, would I have the 'freedom' to 'forget' about it for a month and receive a very-close-to-zero (as in, a few cents) bill? Do you do it/know of anybody who does? Any thoughts on the matter (as in, "yes, it's a good idea", or "yes, but there's this 'gotcha': ...", or "no, nobody does it because of...")? PS: sorry for the loong question text. I highlighted the main questions for easy view. Also, I'm not sure if this question is actually more than one and if it's desirable for the community, so, sorry if it is too! Thanks in advance!

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• Coffee spilled inside computer, damaged hard drive

  - by Harpreet

  Today coffee spilled over my table, and some of it (very less) reached the PC case placed under the table. I think little bit of it got inside the PC case through the front. As that happened the fan started running very fast and made noise. I tried to restart to see if it becomes fine, but the computer didn't start again. First it gave an error of "Alert! Air temperature sensor not detected" and didn't start. Next I tried again multiple times of starting the computer but then it gave some memory error. I was not able to start the computer. Incase there's a problem in hard disk or something related to memory, is there any way we can extract our work or data? I am scared if I am not able to extract my work in case some problem occurs like that. What options would I have? Help!! EDIT: I have attached the photo here and you can see the area spilt in red circle. The hard drive electronics have been affected and internal speaker may also have been affected. Any advise on cleaning and if hard drive can work? EDIT 2: Are there any professional services offered to extract data from blemished hard disk, like this one, in case I am not able to run it personally?

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• Estimating compressed file size using a list parameter

  - by Sai

  I am currently compressing a list of files from a directory in the following format: tar -cvjf test_1.tar.gz -T test_1.lst --no-recursion The above command will compress only those files mentioned in the list. I am doing this because this list is generated such that it fits a DVD. However, during compression the compression rate decreases the estimated file size and there is abundant space left in the DVD. This is something like a Knapsack algorithm. I would like to estimate the compressed file size and add some more files to the list. I found that it is possible to estimate file size using the following command: tar -cjf - Folder/ | wc -c This command does not take a list parameter. Is there a way to estimate compressed file size? I am also looking into options like perl scripts etc. Edit: I think I should provide more information since I have been doing a lot of web search. I came across a perl script(Link)that sort of emulates the Knapsack algorithm. The current problem with the above mentioned script is that it splits the files in their original state. When I compress the files after splitting them, there are opportunities for adding more files which I consider to be inefficient. There are 2 ways I could resolve the inefficiency: a) Compress individual files and save them in a directory using a script. The compressed file could provide a best estimate. I could generate a script using a folder of compressed files and use them on the uncompressed ones. b) Check whether the compressed file's size is less than the required size. If so, I should keep adding files until I meet the requirement. However, the addition of new files to the compressed file is an optimization problem by itself.

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• Constant beeping

  - by Bogi Juul Peterson

  My computer has a problem with beeping. I'll first tell you how it started: One night I decided to watch a cartoon, and I took some water and food with me to eat while I watch. I fell asleep and when I woke up I had spilled water all over my keyboard. I didn't react quickly, because it went unnoticed for about 1 and a half hours. When I noticed, I quickly put my laptop on a radiator to try to dry it. When I turned the computer on there was a constant beeping sound. I didn't know what caused it, and I'm still not sure, but I think it has something to do with the USB hub. If I let the computer stand for some hours without any USB connections, it's fine, but when I put any kind of USB device in, it starts beeping. The laptop keyboard doesn't work so I have to have some kind of USB device connected to use the computer. The beeping is going on while I'm writing this and it makes my computer lag so much that it can make delays from the keyboard be from 1 second to 10 seconds. I need this computer because I don't have the money to buy a new one, and I have to use this computer for homework and games. The beeping is constant, with less than a second between beeps. If anyone has a solution, please help.

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• Mysql - innoDb - is in the future! Current system log sequence number

  - by Ward Loockx

  I have this error in my syslog. I restored an older dump to solve this problem, after some reading. Now The errors in syslog are far less than before. But still a few times an hour I get Sep 1 14:23:29 homer mysqld: 120901 14:23:29 InnoDB: Error: page 96637 log sequence number 7 1223357717 Sep 1 14:23:29 homer mysqld: InnoDB: is in the future! Current system log sequence number 6 647303887. Sep 1 14:23:29 homer mysqld: InnoDB: Your database may be corrupt or you may have copied the InnoDB Sep 1 14:23:29 homer mysqld: InnoDB: tablespace but not the InnoDB log files. See Sep 1 14:23:29 homer mysqld: InnoDB: http://dev.mysql.com/doc/refman/5.1/en/forcing-recovery.html Sep 1 14:23:29 homer mysqld: InnoDB: for more information. Sep 1 14:23:29 homer mysqld: 120901 14:23:29 InnoDB: Error: page 96638 log sequence number 8 150027924 Sep 1 14:23:29 homer mysqld: InnoDB: is in the future! Current system log sequence number 6 647303887. Sep 1 14:23:29 homer mysqld: InnoDB: Your database may be corrupt or you may have copied the InnoDB Sep 1 14:23:29 homer mysqld: InnoDB: tablespace but not the InnoDB log files. See Sep 1 14:23:29 homer mysqld: InnoDB: http://dev.mysql.com/doc/refman/5.1/en/forcing-recovery.html Sep 1 14:23:29 homer mysqld: InnoDB: for more information. Sep 1 14:23:29 homer mysqld: 120901 14:23:29 InnoDB: Error: page 96639 log sequence number 7 4208567151 Sep 1 14:23:29 homer mysqld: InnoDB: is in the future! Current system log sequence number 6 647303887. Sep 1 14:23:29 homer mysqld: InnoDB: Your database may be corrupt or you may have copied the InnoDB Sep 1 14:23:29 homer mysqld: InnoDB: tablespace but not the InnoDB log files. See Sep 1 14:23:29 homer mysqld: InnoDB: http://dev.mysql.com/doc/refman/5.1/en/forcing-recovery.html Sep 1 14:23:29 homer mysqld: InnoDB: for more information. Anybody that knows how I can track what database is causing this issue? And how to fix?

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• Which is more secure: Tomcat standalone or Tomcat behind Apache?

  - by NoozNooz42

  This question is not about performance, nor about load-balancing, etc. Which would be more secure: running Tomcat in standalone mode or running Tomcat behind apache? The thing is, Tomcat is written in Java and hence it is pretty much immune to buffer overrun/overflow (unless a buffer overrun in a C-written lib used by Tomcat can be triggered, but they're rare [the last I remember was in zlib, many many moons ago] and one heck of a hack to actually exploit), which gets rid of a lot of potential exploits. This page: http://wiki.apache.org/tomcat/FAQ/Security has this to say: There have been no public cases of damage done to a company, organization, or individual due to a Tomcat security issue... there have been only theoretical vulnerabilities found. All of those were addressed even though there were no documented cases of actual exploitation of these vulnerabilities. This, combined with the fact that buffer overrun/overflow are pretty much non-existent in Java, makes me believe that Tomcat in standalone mode is pretty secure. In addition to that, I can install both Java and Tomcat on Linux without needing to be root. The only moment I need to be root is to set up a transparent port 8080 to port 80 forwarding (and 8443 to 443). Two iptables line as root, that's all root is needed for. (I don't know for Apache). Apache is much more used than Tomcat and definitely does not have a security track record as good as Tomcat. What would make Tomcat + Apache more secure? What would make Tomcat + Apache less secure? In short: which is more secure, Tomcat standalone or Tomcat with Apache? (remembering that performance aren't an issue here)

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• Options for small windows network setup without dedicated server?

  - by Mitch

  I'm very weak on networking and hope someone can point me in the right direction: I have written some windows client/server software which incorporates a database which is located on a windows server. I have a test installation running at a customer's office where the server has a static IP address. In this case its easy for the clients to access the database because of the fixed IP address. Also, customers with network servers generally have specialist support staff to set up my software, so its not such a problem for me. However I also need to offer the software to customers who have small offices with less than 10 PCs and no dedicated network server. In this case I want the customer to be able to nominate one PC as the database "server" and install my software and have the clients access it. But in this situation I believe the "server" PC may not have a dedicated IP address. Q1: What is the best way to set this up simply and make it work? Can I reliably reference the "server" by using its name, or is there a way to assign dummy fixed IP addresses? Ideally this needs to be workable on small networks running a mixture of XP/Vista/Windows7 as my target market may well have mixed OSes etc. I guess this would be akin to home networking? Many thanks Mitch

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• How can I get VirtualBox to run at 1366x768?

  - by Joe White

  I'm trying to run Windows 8 in VirtualBox. My laptop's display is exactly 1366x768. Windows 8 disables some of its features if the resolution is less than 1366x768, so I need to run the guest OS fullscreen. The problem is, VirtualBox refuses to run the guest at 1366x768. When VirtualBox is "fullscreen", the guest is only 1360x768 -- six pixels too narrow. So there's a three-pixel black bar at the left and right sides of the display. This user had the same problem, but the accepted answer is "install the Guest Additions", which I've already done; that got me to 1360, but not to 1366. According to the VirtualBox ticket tracker, there used to be a bug where the guest's screen width would be rounded down to the nearest multiple of 8, but they claim to have fixed the bug in version 3.2.12. I'm using version 4.1.18 and seeing the same problem they claim to have fixed, so either they broke it again, they were wrong about ever having fixed it, or my problem is something else entirely. This answer suggested giving the VM 128MB of video memory, and claimed no problems getting 1366x768 afterward. When I created the VM, its display memory was already defaulted to 128 MB. I tried increasing it to 256MB, but with no effect: the guest is still six pixels too narrow. My host OS is Windows 7 64-bit, and I'm running VirtualBox 4.1.18. How can I get VirtualBox to run my guest OS fullscreen at my display's native resolution of 1366x768?

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• Disaster recovery backup of files/photos for personal use

  - by Renesis

  I'm looking for the best method to store a backup of important files and 5+ years of digital photos that is safe from some type of fire/flood disaster in my home. I'm looking for: Affordable: Less than $100/yr or first-time cost. Reliable: At least a smaller chance of failing than there is of fire or flood Easy for initial backup and to add to, and at least semi-easy to recover. I recently purchased a small home safe for physical vitals. It was inexpensive, solid, and is fire/water safe. If I had a physical copy of the digital files, the safe would work fine for this, but I don't know what to store in it that adequately meets the requirements above. Hard drive - I read that the danger of it not spinning up makes a hard drive a bad choice for this type of storage, although it was my first thought and would definitely be the simplest choice - very easy to take out once a month and add files to. DVDs - Way too much of a hassle for both backup and restore. Tape - No idea on the affordability of this option Online - Given that I have at least 300GB already and ever-increasing megapixels means ever-bigger files, and my ISP upload is about 2Mb at the best, this just doesn't sound like a good option for me, but I could be convinced. Other - Have I missed something? Also, I'm already covered both for sync between computers (Dropbox) and a nightly backup of these files (External HDD). The problem with the nightly backup is obviously that it's always with the computer and in a disaster would be destroyed along with it. Is anyone else doing something similar? Is the HDD as poor of a choice as I read, or is it a feasible option? Maybe two to reduce the likelihood of failure?

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• Is there a POSIX pathname that can't name a file?

  - by Charles Stewart

  Are there any legal paths in POSIX that cannot be associated with a file, regular or irregular? That is, for which test -e "$LEGITIMATEPOSIXPATHNAME" cannot succeed? Clarification #1: pathnames By "legal paths in POSIX", I mean ones that POSIX says are allowed, not ones that POSIX doesn't explicitly forbid. I've looked this up, and the are POSIX specification calls them character strings that: Use only characters from the portable filename character set [a-zA-Z0-9._-] (cf. http://www.opengroup.org/onlinepubs/009695399/basedefs/xbd_chap03.html#tag_03_276); Do not begin with -; and Have length between 1 and NAME_MAX, a number unspecified for POSIX that is not less than 14. POSIX also allows that filesystems will probably be more relaxed than this, but it forbids the characters NUL and / from appearing in filenames. Note that such a paradigmatically UNIX filename as lost+found isn't FPF, according to this def. There's another constant PATH_MAX, whose use needs no further explanation. The ideal answer will use FPFs, but I'm interested in any example with filenames that POSIX doesn't expressly forbid. Clarification #2: impossibility Obviously, pathnames normally could be bound to a file. But UNIX semantics will tell you that there are special places that couldn't normally have arbitrary files created, like in the /dev directory. Are any such special places stipulated in POSIX? That is what the question is getting after.

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• Setting Outlook Web Access as default mail client in Firefox

  - by Barton Chittenden

  The company that I work for is nice enough to let me use Linux for work, but they use Outlook. I've been using Outlook Web Access (OWA) as my mail client, which is more or less acceptable. The only problem is that whenever I click on a mailto link or use the "Send Link" menu option in firefox, I'm prompted to use evolution. Since connecting to an exchange server through evolution seems to be sketchy at best, I would like to set OWA as my default mail client. I'm using Firefox 3.6.13 Here's what I've found so far: Default mail client can be found at Edit Menu -> Preferences -> Applications Tab -> mailto When I click on the drop down menu, one of the options is "Application Details" This shows two options by default: Google Yahoo! Mail Each of these shows how to launch that service. For Gmail: https://mail.google.com/mail/?extsrc=mailto&url=%s For Yahoo!: http://compose.mail.yahoo.com/?To=%s I presume that Outlook Web Access has something similar. Based on the googling that I've done so far, I think that this should look something like this: https://<server name>/owa/?cmd=compose... A little experimentation on my part shows that the following will compose a message: https://<email server>/owa/?ae=Item&a=New&t=IPM.Note but I still don't know how to specify recipient, subject or body of the email to be composed... What I want to know is a) does anyone know the URL parameters to compose a mailto in Outlook Web Access, including subject, recipient and body? else b) can someone give me a decent pointer for where to get this information?

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• Is .htaccess slowing down my dedicated server?

  - by David Robles

  First of all, I consider myself more a programmer than a servers guy. I have a website where I receive about 3,000 visits per day, which I think is a lot less than the max capacity for a dedicated server. However, I've noticed that the connection to the website is pretty slow, e.g., to load images, to connect to it via SSH, etc. I configured .httaccess recently to avoid hotlinking to images in my server (i.e. .jpg, .gif and .png), and I was wondering if that could be slowing down my website. This is the configuration that I have: # BEGIN WordPress <IfModule mod_rewrite.c> RewriteEngine On RewriteBase / RewriteEngine on RewriteCond %{HTTP_REFERER} !^$ RewriteCond %{HTTP_REFERER} !^http://www.mysite.com/.*$ [NC] RewriteCond %{HTTP_REFERER} !^http://www.mysite.com$ [NC] RewriteRule .*\.(jpg|jpeg|gif|png|bmp|swf)$ http://www.google.com/ [R,NC] RewriteCond %{REQUEST_FILENAME} !-f RewriteCond %{REQUEST_FILENAME} !-d RewriteRule . /index.php [L] </IfModule> # END WordPress I found some code to do that in google, and I just copied to .htacces since I'm not an expert in apache. It works, but I don't know if that is the best way to do it. How can I see if that is the reason why the server is slow? Are there any tools to monitor it? What would you do guys? Thanks in advance!

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• DAS vs SAN storage for serving 2 to 4 nodes

  - by Luke404

  We currently have 4 Linux nodes with local storage, arranged in two active/passive pairs with storage mirrored using DRBD, running virtual machines (actually using Xen Hypervisor) for typical hosting workloads (mail, web, a couple VPS, etc.). We're approaching the (presumed) maximum IOPS of those servers, and we're planning to migrate to an external storage solution with two active nodes, with capacity for up to four active nodes. Since we're an all-Dell shop I've done some research and found the MD3200 / MD3200i products should be the ones we're looking for. We are pretty sure we won't be attaching more than 4 hosts on a single storage and I'm wondering if there is any clear advantage for one or the other. In theory I should be able to attach 4 SAS hosts to a single MD3200 (single links on a single controller MD3200, or dual redundant SAS links from each host to a dual-controller MD3200), or 4 iSCSI hosts to a single MD3200i (directly on its 4 GigE ports without any switch, again with dual links for the dual controller option). Both setups should let us implement live VM migration since all hosts can access all the LUNs at the same time, and also some shared filesystem like GFS2 or OCFS2. Also, both setups should allow full redundancy of the whole system (assuming dual controllers in the storage). One difference I can see is that the DAS solution is actually limited to 4 hosts while the iSCSI one should be able to grow to more hosts (adding two GigE switches to the mix). One point for the iSCSI solution is that it would allow us to start out with our current nodes and upgrade them at a later time (we can't add other SAS controllers, but they already have 4 GigE ports each). With the right (iSCSI|SAS) controllers I should be able to connect diskless nodes and boot them off the external storage which I think is a good thing (get rid of any local storage). On the other hand, I would have thought the SAS one to be cheaper but it seems like an MD3200 actually costs a little less than an MD3200i (?) (please note: I've used Dell gear in my examples since that's what we're looking for but I assume the same goes with other vendors) I would like to know if my assumptions above are correct, and if I'm missing any important difference between the two setups.

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• Postfix qmgr process causes heavy overload on mailservers

  - by Mattias

  We are using Postfix as MTA for our e-mailmarketing software and once in a while we see that the load on one of the mailservers rises above 5. The load is caused by the qmgr-process which is the heart of Postfix and I see that it is consuming a lot of CPU resources. The process seems to be stuck because after 15 minutes it is still doing the samething and still increasing the load. Once I restart the postfix service the load rapidly decreases to below 1 and Postfix continues to send e-mails without any problems. I'm wondering if anyone else has encountered this problem and if people have suggestions on how to prevent it. The problem shows up on all our mailservers but almost never at more than 1 at the time. It seems to be triggered only when we are sending a mailing but the size (10 or 100.000 e-mails doesn't seem to make a difference). It maybe happens once a week or even less often and the time and day is also different every time. We tried to solve the problem by decreasing the amount of messages qmgr is allowed to process but this didn't solve it. We are using Postfix 2.5.5 on Debian Lenny 5.0.8 (postfix is installed through the default Debian repository). No special messages can be found in the logs (syslog, messages, mail.*). Thank you for your time

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• Windows XP: How to delete files and folders that cannot be deleted?

  - by glenneroo

  I have a backup copy of a previous Windows' Documents and Settings folder which only contains my original user and within 2 more directories: Favorites and Local Settings. When I try to delete Local Settings I get this error: When I try to delete Favorites, I get this error: I ran this in a cmd shell: attrib *.* -r -a -s -h /s ...but it did not help, nor did it return any errors/warnings. I used Unlocker v1.8.5 and LockHunter repeatedly at multiple levels to see if any files are in use, but both always say: No Files Locked. Update #1: I was able to rename the directory, which now gives me this warning before (trying to) delete: If I press Yes (or Yes to All) then I get this error: Update #2: I let chkdsk /f run which required a reboot since it's on my primary system partition. During Stage 2 scanning, I received about 40 of these: Deleting an index entry from index $0 of file 25. ...followed by: Deleting index entry cookies in index $I30 of file 37576. ...but I still get the first error dialog above when trying to delete. Update #3: Digging deeper, the 99 is the name of one of many directories located deep in here: C:\Documents and Settings.OLD\User\Local Settings\Application Data\Microsoft\Messenger\[email protected]\SharingMetadata\[email protected]\DFSR\Staging\CS{D4E4AE55-B5E2-F03B-5189-6C4DA6E41788}\ Inside each of those directories were files with names such as: 2300-{C93D01AC-0739-4FD9-88C7-13D2F21A208E}-v2300-{C93D01AC-0739-4FD9-88C7-13D2F21A208E}-v2300-Downloaded.frx I noticed that, unlike all the directories, I couldn't rename any of these files. I also noticed that the file + dir names were extremely long: Original directory = 194 characters Filenames = 100+ characters Together the length exceeds the 255-char limit which is bad and would explain the error message I posted in Update #1. Partial Solution: Rename all directories until the total path length is less than 100. Afterwards I was able to rename the .frx files, not to mention delete everything inside the Local Settings directory. This is only a partial solution because this (empty) directory is still undeleteable: C:\1\2\Favorites\Wien\What To Do.. I'm guessing because of the ".." at the end, Windows (Explorer and cmd) can't deal with it: Here is what Explorer properties shows: Any ideas?

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• Why is my mono/XSP site loading slow?

  - by acidzombie24

  I have two sites on the same server. One is loading perfectly and incredibly fast. The other is an equally complex site except a bit less javascript and 0 images. Its taking several seconds to load and there is a 1 in 3 chance that i get a Http500 error. WTF I grabbed the lastest 2.6.? version of mono, mod_mono and xsp (libgdiplus-2.6.7, xsp-2.6.5, mod_mono-2.6.3 and mono 2.6.7) This is whats in apache error.log [Mon Jan 03 19:33:40 2011] [error] (70014)End of file found: read_data failed [Mon Jan 03 19:33:40 2011] [error] Command stream corrupted, last command was 1 [Mon Jan 03 19:34:52 2011] [error] (70014)End of file found: read_data failed [Mon Jan 03 19:34:52 2011] [error] (70014)End of file found: read_data failed [Mon Jan 03 19:34:52 2011] [error] Command stream corrupted, last command was 1 [Mon Jan 03 19:34:52 2011] [error] Command stream corrupted, last command was 1 this is the page error Internal Server Error The server encountered an internal error or misconfiguration and was unable to complete your request. Please contact the server administrator, webmaster@localhost and inform them of the time the error occurred, and anything you might have done that may have caused the error. More information about this error may be available in the server error log. Apache/2.2.9 (Debian) PHP/5.2.6-1+lenny9 with Suhosin-Patch mod_mono/2.6.3 Server

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• PhpMyAdmin import/export - strange character encoding issues.

  - by John Hunt

  Hello, I'm migrating a site to a new host, and there are a couple of databases on there. There's no SSH access so I'm stuck with phpmyadmin. The issue is that certain characters (namely just whitespace) seems to being corrupt on the new site (same html, and apache doesn't seem to be messing with any encodings - you can see the strange characters have changed when I use less on my linux machine after downloading a table dump from both servers.) The issue isn't as bad if I import into the new database as utf-8 - whitespace characters only have one funny A type symbol instead of two. I've been trying various combinations of character encoding etc to no avail. Exporting from: phpMyAdmin 2.6.2 MySQL 4.1.20 MySQL connection collation: utf8_general_ci MySQL charset: UTF-8 Unicode (utf8) Collation on tables and their fields is: latin1_swedish_ci Importing to: phpMyAdmin - 2.11.9.2 MySQL client version: 5.0.45 MySQL charset: UTF-8 Unicode (utf8) MySQL connection collation: utf8_general_ci The import sql has this kind of thing in it: ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=192 ; I get the impression this is actually a bug or something with mysqldump as nothing seems to work.. does anyone have any insight into this? Cheers, John.

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• How to access remote network resource from local machine

  - by jerluc

  I just configured VPN access successfully so that I now can connect to my workstation at work from my personal Linux box at home. The problem is that all of my dev files for a server I'm locally running are on my personal box and cannot be transfered to my workstation (at least not in any timely manner over this connection given the amount of data, in addition to the many reconfigurations which would be required for the server to run even if I could somehow get the files across). So essentially, I am able to run my server locally on my personal computer, however, the data-sources required for the back-end are accessible only from within the office's network. But is there some way for me to somehow either access the data-sources directly through a VPN connection or even if I need to be a bit more convoluted by connecting via VPN to my workstation and then somehow connecting to the data-sources through my workstation to my personal computer? And here I could really care less about the speed of the connection from my server to the data-sources since they will probably only be fetched a few times every hour or so. Thanks! Sorry if this a stupid question and/or doesn't make any sense! (And sorry for anyone who read this at stackoverflow, I posted it in the wrong area.)

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• Intermittent NFS lockups on Isilon cluster

  - by blackbox222

  We have an Isilon cluster with 8 IQ 12000x nodes which exports storage via several NFS shares for a handful of Linux and Solaris clients. There is a Linux system that has one of these NFS filesystems mounted. I/O to this filesystem is moderately heavy from the Linux system. Every 3-4 weeks (it's not on any kind of discernible schedule, and sometimes is more/less frequent than this), we notice that all activity ceases on this NFS mount (the process hangs, as if the network stopped working so process is stuck in uninterruptible sleep) - 30 minutes later, the share recovers and things continue to work normally. The kernel log from the affected machine is as follows: Dec 3 10:07:29 redacted kernel: [8710020.871993] nfs: server nfs-redacted not responding, still trying Dec 3 10:37:17 redacted kernel: [8711805.966130] nfs: server nfs-redacted OK relevant /etc/fstab line: nfs-redacted:/ifs/nfs/export_data/shared/...redacted... /data nfs defaults 0 0 I've checked to see if there are any scheduled processes e.g. cron jobs, Isilon related functions e.g. snapshots, etc that might be causing these hangups but I can't seem to find anything. I'm also not aware of any network related issues or maintenance that would cause this. All of the lockups last almost exactly 30 minutes per the kernel logs. Perhaps someone has some suggestions I could try? (I considered a soft mount to avoid the problems associated with processes accessing the filesystem hanging; however am wary of the corruption that could result and it would not really solve the underlying issue anyway).

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• Server 2012, Jumbo Frames - should I expect problems?

  - by TomTom

  Ok, this sound might stupid - but is there any negative on just enabling jumbo frames in practice? From what I understand: Any switch or ethernet adapter that sees a jumbo frame it can not handle will just drop it. TCP is not a problem as max frame size is negotiated in the setinuo phase. UCP is a theoretical problem as a server may just send a LARGE UDP packet that gets dropped on the way. Practically though, as UDP is packet based, I do not really think any software WOULD send a UDP packet larger than 1500 bytes net without app level configuration changes - at least this is how I do my programming, as it is quite hard to get a decent MTU size for that without testing yourself, so you fall back in programming to max 1500 packets. The network in question is a standard small business network - we upgraded now from a non managed 24 port switch to a 52 port switch with 4 10g ports (netgear - quite cheap) and will mov a file server to 10g for also ISCSI serving. All my equipment on the Ethernet level can handle minimum 9000 bytes and due to local firewalls I really want to get packets larger (less firewall processing), but the network is also NAT'ed to the internet. On top, different machines move around (download) large files (multi gigabyte area) quite often for processing. The question is - can I expect problems when I just enable jumbo frames? Again, this is not totally ignorance - I just don't see programs sending more than 1500 byte UDP packets (if that is a practical problem please tell me) and for TCP the MTU is negotiated anyway. if there is a problem I can move to a dedicated VLAN, but this has it's own shares of problems as basically most workstations must then be on both VLAN's.

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• Unexplained cache RAM drops on Linux machine

  - by FunkyChicken

  I run a CentOS 5.7 64 machine with 24gb ram and running kernel 2.6.18-274.12.1.el5. This machine runs only Nginx, php-fpm and Xcache as extra applications. Since about 3 weeks my memory behavior on this machine has changed and I cannot explain why. There are no crons running which flush anything like this. There are also no large numbers of files being deleted/changed during these drops. The 'cached' memory gets dropped about every few hours, but it's never a set gap between flushes, this indicates to me that some bottleneck gets reached instead. It also always seems to be when total memory usages gets to about 18GB, but again, not always exactly 18GB. This is a graph of my memory usage: As you can see in the graph the 'buffers' always stay more or less the same, it is mainly the 'cache' that gets dropped. Running vmstat -m I have outputted the memory usage just before and just after a memory drop. The output is here: http://pastebin.com/diff.php?i=hJqZqztm 'old version' being before, 'new version' being after a drop. About 3 weeks ago my server crashed during a heavy DDOS attack, after I rebooted the machine this odd behavior started. I have checked a bunch of logs, restarted the machine again, and cannot find any indication what changed. During these 'cache' memory drops, my iNode usage drops at the same time. Does anyone have any idea what might be causing this behavior? Clearly my RAM isn't full, so I am curious why this could be happening.

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• Disconnect from PHP after output generated

  - by Oli

  I have a LEMP stack. Nginx sitting in front of PHP-FPM. Because some of the sites are heavy and there's OPCode caching, PHP is set up so that there are only 5 child processes running. The aim being that each child can deal with any request in less than half-a-second and then move onto the next request. One problem I've found is that if it's a big chunk of HTML that's getting sent out, and the user has a slow connection, that PHP thread stays occupied until they've finished downloading. Because of my current setup, I have a pretty unforgiving timeout inside PHP where the script is killed after 20 seconds. This is to make sure everybody gets a turn but on a slow connection, this can mean the user gets cut off with a 504 Gateway timeout. I was wondering if there was some sort of buffer solution that I could implement within or just behind Nginx that sent the request through and then... well... buffered the content into its own cache and feed that onto the client as and when they could download it. The aim being that the underlying PHP thread can be freed up. What I'm asking for doesn't have to be PHP-specific. Anything that deals with FastCGI, or even any Nginx-upstream might have a similar issue to this.

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• why does mysql have so many more open and fragmented tables than tables in the DB?

  - by kswift

  I've been working making our database run a little smoother and had good results over the past week. But there are still some things I dont understand. For one thing, the database has 25 tables. But mysql status shows 512 are open: mysqladmin status Uptime: 212854 Threads: 1 Questions: 43041 Slow queries: 7 Opens: 2605 Flush tables: 1 Open tables: 512 Queries per second avg: 0.202 I've read that isam opens extra file descriptors and a few other reasons why the number of open tables might be higher than 25, but I am guessing that 512 is not a good thing. Any suggestions on why this might be or what I should be looking into? I've also been using mysqltuner and its been helpful. But it has consistently listed the number of fragmented tables at 207. In phpmyadmin I've selected all the tables and optimized them several times. It hasn't reduced the number of fragmented tables that mysqltuner reports. I think I am missing some important concept about how this all works. Does anyone have any suggestions to point me in the right direction or narrow down google searches or just generally help me be less clueless? Thanks!

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