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  • Creating a Large Matrix in ff

    - by Ryan Rosario
    I am trying to create a huge matrix in ff, and I know that ff is good for this sort of thing. But, there is a major problem. The dimensions of the matrix exceed .Machine$max_integer! I am running on a 64 bit machine, using 64bit R and 64bit ff. Is there any way to get around this problem? It's been suggested that R is using the MAXINT value from stdint.h. Is there any way to fix this without changing that file and possibly breaking build? > ffMatrix <- ff(vmode="boolean", dim=c(1e10,1e10)) Error in if (length < 0 || length > .Machine$integer.max) stop("length must be between 1 and .Machine$integer.max") : missing value where TRUE/FALSE needed In addition: Warning message: In ff(vmode = "boolean", dim = c(1e+10, 1e+10)) : NAs introduced by coercion > 1e+10 > .Machine$integer.max [1] TRUE

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  • EasyXDM passing data issue

    - by Jeff Ryan
    I'm using rpc with XDM, and I can send simple data back and forth easily between child and parent window. But it seems to be limited to simple strings and numbers. The demos on the site only use numbers. When I try to send a json ecoded string, I get a cross domain error. When I use cors, I can make ajax requests fine, but I can't display the child page in the iframe, because the data is returned and not rendered. My question is, how can I render an iframe, and pass complex data back and forth. Or maybe I am doing something wrong?

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  • Directly call distutils' or setuptools' setup() function with command name/options, without parsing

    - by Ryan B. Lynch
    I'd like to call Python's distutils' or setuptools' setup() function in a slightly unconventional way, but I'm not sure whether distutils is meant for this kind of usage. As an example, let's say I currently have a 'setup.py' file, which looks like this (lifted verbatim from the distutils docs--the setuptools usage is almost identical): from distutils.core import setup setup(name='Distutils', version='1.0', description='Python Distribution Utilities', author='Greg Ward', author_email='[email protected]', url='http://www.python.org/sigs/distutils-sig/', packages=['distutils', 'distutils.command'], ) Normally, to build just the .spec file for an RPM of this module, I could run python setup.py bdist_rpm --spec-only, which parses the command line and calls the 'bdist_rpm' code to handle the RPM-specific stuff. The .spec file ends up in './dist'. How can I change my setup() invocation so that it runs the 'bdist_rpm' command with the '--spec-only' option, WITHOUT parsing command-line parameters? Can I pass the command name and options as parameters to setup()? Or can I manually construct a command line, and pass that as a parameter, instead? NOTE: I already know that I could call the script in a separate process, with an actual command line, using os.system() or the subprocess module or something similar. I'm trying to avoid using any kind of external command invocations. I'm looking specifically for a solution that runs setup() in the current interpreter. For background, I'm converting some release-management shell scripts into a single Python program. One of the tasks is running 'setup.py' to generate a .spec file for further pre-release testing. Running 'setup.py' as an external command, with its own command line options, seems like an awkward method, and it complicates the rest of the program. I feel like there may be a more Pythonic way.

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  • How can I save BioPerl sequence nested features in genbank or embl format?

    - by Ryan Thompson
    In BioPerl, a sequence object can have any number of features, and each of these can have subfeatures nested within them. For example, a feature may be a complete coding sequence of a gene, and its subfeatures might be individual exons that are concatenated to form the full coding sequence. However, when I use BioPerl to write a sequence object to a file in genbank or embl format, only the top-level features are written to the file, not the sub-features nested within the top-level features. How can I store my subfeatures in sequence files? Should I just convert all my subfeatures into top-level features, and then reconstruct the tree structure next time I read in the sequence?

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  • ASP.NET Canceling the Default Submit Button

    - by Ryan Smith
    I have an ASP.NET application where there's a few ASP.NET buttons and several plain HTML buttons. Anytime there's a textbox where a user hits enter, the ASP.NET button trys to submit the form. I know I can change the defaultButton, but I don't want there to be any default button. I just want it so when the user presses enter it doesn't do anything. I've tried setting defaultButton to blank, but that doesn't seem to work and I can't seem to find the answer anywhere on the web. What's the code to make this happen? Thanks.

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  • FormsAuthentication redirecting to login page when visiting root of website

    - by Ryan Lattimer
    I wanted to use FormsAuthentication to secure my static files as well on my site, so I followed the instructions located here http://learn.iis.net/page.aspx/244/how-to-take-advantage-of-the-iis7-integrated-pipeline/ under title "Enabling Forms Authentication for the Entire Application". Now though, when I try to visit the site by going directly to http://www.mysite.com I get redirected to http://www.mysite.com/Login.aspx?ReturnUrl=%2f instead of it using my DefaultDocument I have set. I can go to my default document by just visiting http://www.mysite.com/Home.aspx without any issues because it is set to allow anonymous access. Is there something I need to add into my web.config file to make iis7 allow anonymous access to the root? I tried adding with anonymous access but no such luck. Any help would be much appreciated. Both Home and the Login form allow anonymous. <location path="Home.aspx"> <system.web> <authorization> <allow users="*" /> </authorization> </system.web> </location> <location path="Login.aspx"> <system.web> <authorization> <allow users="*" /> </authorization> </system.web> </location> Login form is set as the loginUrl <authentication mode="Forms"> <forms protection="All" loginUrl="Login.aspx"> </forms> </authentication> Default document is set as Home.aspx <defaultDocument> <files> <add value="Home.aspx" /> </files> </defaultDocument> I have not removed any of the iis7 default documents. However, Home.aspx is first in the priority.

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  • image hover animate

    - by Ryan Max
    Hello. I have the following jQuery script that makes an orange transparent hover effect cover the image when it's rolled over. How do I make it so this script will animate in and out (with a fade?) $(document).ready(function() { $('#gallery a').bind('mouseover', function(){ $(this).parent('li').css({position:'relative'}); var img = $(this).children('img'); $('<div />').text(' ').css({ 'height': img.height(), 'width': img.width(), 'background-color': 'orange', 'position': 'absolute', 'top': 0, 'left': 0, 'opacity': 0.5 }).bind('mouseout', function(){ $(this).remove(); }).insertAfter(this); }); });

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  • Use an Array to Cycle Through a MySQL Where Statement

    - by Ryan
    I'm trying to create a loop that will output multiple where statements for a MySQL query. Ultimately, my goal is to end up with these four separate Where statements: `fruit` = '1' AND `vegetables` = '1' `fruit` = '1' AND `vegetables` = '2' `fruit` = '2' AND `vegetables` = '1' `fruit` = '2' AND `vegetables` = '2' My theoretical code is pasted below: <?php $columnnames = array('fruit','vegetables'); $column1 = array('1','2'); $column2 = array('1','2'); $where = ''; $column1inc =0; $column2inc =0; while( $column1inc <= count($column1) ) { if( !empty( $where ) ) $where .= ' AND '; $where = "`".$columnnames[0]."` = "; $where .= "'".$column1[$column1inc]."'"; while( $column2inc <= count($column2) ) { if( !empty( $where ) ) $where .= ' AND '; $where .= "`".$columnnames[1]."` = "; $where .= "'".$column2[$column2inc]."'"; echo $where."\n"; $column2inc++; } $column1inc++; } ?> When I run this code, I get the following output: `fruit` = '1' AND `vegetables` = '1' `fruit` = '1' AND `vegetables` = '1' AND `vegetables` = '2' `fruit` = '1' AND `vegetables` = '1' AND `vegetables` = '2' AND `vegetables` = '' Does anyone see what I am doing incorrectly? Thanks.

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  • HTML checkbox field is being passed to PHP as checked even when it is not

    - by Ryan
    Hello all, First of all thanks in advance, this has been very frustrating and I'm hoping someone can see something I'm not, I am definitely no php expert. Well here' what is going on. I have a form where I have a checkbox for people to opt in to our newletter. The form element looks like this: <label for=newsletter accesskey=N class="checkbox">Signup for Cloverton's Newsletter</label> <input name="newsletter" type="checkbox" id="newsletter" value="Yes" style="width:20px;" /> That is then submitted to a php file with this code: if (isset($_POST['newsletter']) && $_POST['newsletter'] == 'Yes'){ echo "newletter yes"; $newsletter = 1; }else{ echo "newsletter no"; $newsletter = 0; } $newsletter is then inserted into a database field. The issue is that whether the box is checked or not it is being sent to php as true, so every entry is receiving the newsletter. Any help would be greatly appreciated! Thanks!

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  • Showing renames in hg status?

    - by Ryan Thompson
    I know that Mercurial can track renames of files, but how do I get it to show me renames instead of adds/removes when I do hg status? For instance, instead of: A bin/extract-csv-column.pl A bin/find-mirna-binding.pl A bin/xls2csv-separate-sheets.pl A lib/Text/CSV/Euclid.pm R src/extract-csv-column.pl R src/find-mirna-binding.pl R src/modules/Text/CSV/Euclid.pm R src/xls2csv-separate-sheets.pl I want some indication that four files have been moved. I think I read somewhere that the output is like this to preserve backward-compatibility with something-or-other, but I'm not worried about that.

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  • How can I get latency info from Android's AudioTrack class?

    - by Ryan
    I've noticed that the C++ classes underlying the AudioTrack and AudioRecord APIs in Android both have a latency() method that is not exposed via JNI. As far as I can see, the latency() method in AudioRecord still does not take into account the hardware latency (they have a TODO comment for that), but the latency() method in AudioTrack does add in the hardware latency. I absolutely need to get this latency value from AudioTrack. Is there any possible way I can do this? I don't care what kind of crazy hack is needed as long as it doesn't require a rooted phone (the resulting code must still be packaged as an app on the market).

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  • Wondering about a way to conserve memory in C# using List<> with structs

    - by Michael Ryan
    I'm not even sure how I should phrase this question. I'm passing some CustomStruct objects as parameters to a class method, and storing them in a List. What I'm wondering is if it's possible and more efficient to add multiple references to a particular instance of a CustomStruct if a equivalent instance it found. This is a dummy/example struct: public struct CustomStruct { readonly int _x; readonly int _y; readonly int _w; readonly int _h; readonly Enum _e; } Using the below method, you can pass one, two, or three CustomStruct objects as parameters. In the final method (that takes three parameters), it may be the case that the 3rd and possibly the 2nd will have the same value as the first. List<CustomStruct> _list; public void AddBackground(CustomStruct normal) { AddBackground(normal, normal, normal); } public void AddBackground(CustomStruct normal, CustomStruct hover) { AddBackground(normal, hover, hover); } public void AddBackground(CustomStruct normal, CustomStruct hover, CustomStruct active) { _list = new List<CustomStruct>(3); _list.Add(normal); _list.Add(hover); _list.Add(active); } As the method stands now, I believe it will create new instances of CustomStruct objects, and then adds a reference of each to the List. It is my understanding that if I instead check for equality between normal and hover and (if equal) insert normal again in place of hover, when the method completes, hover will lose all references and eventually be garbage collected, whereas normal will have two references in the List. The same could be done for active. That would be better, right? The CustomStruct is a ValueType, and therefore one instance would remain on the Stack, and the three List references would just point to it. The overall List size is determined not by the object Type is contains, but by its Capacity. By eliminating the "duplicate" CustomStuct objects, you allow them to be cleaned up. When the CustomStruct objects are passed to these methods, new instances are created each time. When the structs are added to the List, is another copy made? For example, if i pass just one CustomStruct, AddBackground(normal) creates a copy of the original variable, and then passes it three times to Addbackground(normal, hover, active). In this method, three copies are made of the original copy. When the three local variables are added to the List using Add(), are additional copies created inside Add(), and does that defeat the purpose of any equality checks as previously mentioned? Am I missing anything here?

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  • How do I insert an input's value into a separate form?

    - by ryan
    I'm making a tool for my university that allows students to create a list of classes by doing the following: Searching by course title for their course via an autocomplete input field. Adding that course to a separate form that upon being submitted creates a course list. I am trying to link the autocomplete and the course list form with an 'add to course list' button that inserts a hidden input field into the course list form which can subsequently be submitted by a 'create course list' button. My question is this: How do I take the value of the autocomplete input and insert it into the course list form without using AJAX? So far I have something like the following: <%= text_field_with_auto_complete :course, :title, :size => 40 %> <%= link_to_function "Add to Course List" do |page| page.insert_html :top, :course_list, hidden_field(:courses, :course, {:value => "$('course_title').value"}) %> <% form_for(@course_list) do |f|%> <div id="course_list">Insert selected courses here.</div> <% end %>

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  • Access to Perl's empty angle "<>" operator from an actual filehandle?

    - by Ryan Thompson
    I like to use the nifty perl feature where reading from the empty angle operator <> magically gives your program UNIX filter semantics, but I'd like to be able to access this feature through an actual filehandle (or IO::Handle object, or similar), so that I can do things like pass it into subroutines and such. Is there any way to do this? This question is particularly hard to google, because searching for "angle operator" and "filehandle" just tells me how to read from filehandles using the angle operator.

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  • How do I catch generic fault exceptions in Fitnesse?

    - by Dan Ryan
    Previously within my Fitnesse fixture I was specifying an expected WCF exception using: exception[FaultException] Since then I have converted the WCF service to return a strongly typed FaultContract. I am now getting the following failure message: exception[FaultException`1: "A file with the name DMS Documents/testFileWord.doc already exists. It was last modified by SHAREPOINT\system on 09 Mar 2010 15:36:14 -0000."] This is not unexpected but how do I check for strongly typed fault exceptions? Please note I cannot include the fault message as part of the check as it contains a date which changes (I check this separately).

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  • Extract XML name/value pairs from different nodes in Coldfusion

    - by Ryan French
    Hi All, I am working on some Plesk integration using the XML API and I am trying to figure out how to parse the XML response that I get back. Most of the data is fine, but the Limits and Permissions are setout differently. Essentially they are set out like so: <data> <limits> <limit> <name>foo</name> <value>bar</value> </limit> <limit> <name>foo2</name> <value>bar2</value> </limit> </limits> </data> How do I extract 'bar' from the xml given that I know I want the value of 'foo', but not the value of 'foo2'?

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  • Multiple Jquery modal Dialog Boxes in one page?

    - by Ryan Max
    Hi, I am brand stinking new to jquery and attempting to have a "Services" page for a tech website I am working on. I am having trouble with different services opening the same info in the window. Basically I am using the code straight from the demo. Any ideas on how to have multiple windows in the same page? Thanks!

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  • Cocos2d shake/accelerometer issue.

    - by Ryan Poolos
    So I a little backstory. I wanted to implement a particle effect and sound effect that both last about 3 sec or so when the user shakes their iDevice. But first issue arrived when the build in UIEvent for shakes refused to work. So I took the advice of a few Cocos veterans to just use some script to get "violent" accelerometer inputs as shakes. Worked great until now. The problem is that if you keep shaking it just stacks the particle and sounds over and over. Now this wouldn't be that big of a deal except it happens even if you are careful to try and not do so. So what I am hoping to do is disable the accelerometer when the particle effect/sound effect start and then reenable it as soon as they finish. Now I don't know if I should do this by schedule, NStimer, or some other function. I am open to ALL suggestions. here is my current "shake" code. - (void)accelerometer:(UIAccelerometer *)accelerometer didAccelerate:(UIAcceleration *)acceleration { const float violence = 1; static BOOL beenhere; BOOL shake = FALSE; if (beenhere) return; beenhere = TRUE; if (acceleration.x > violence * 1.5 || acceleration.x < (-1.5* violence)) shake = TRUE; if (acceleration.y > violence * 2 || acceleration.y < (-2 * violence)) shake = TRUE; if (acceleration.z > violence * 3 || acceleration.z < (-3 * violence)) shake = TRUE; if (shake) { id particleSystem = [CCParticleSystemQuad particleWithFile:@"particle.plist"]; [self addChild: particleSystem]; // Super simple Audio playback for sound effects! [[SimpleAudioEngine sharedEngine] playEffect:@"Sound.mp3"]; shake = FALSE; } beenhere = FALSE; }

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  • Redirect parent of a page from a cfwindow

    - by Ryan French
    Hi All, I have a page with cfwindow that require the user to be logged in to view the content on the page. The problem at the moment is if the user logs into the site, then does nothing and the session times out, I have no way that I can think of to redirect the parent of the window to the login screen when the user opens it. So far I have tried using cflocation but that has no way of specifying the container that should be redirected (i.e. the page in the window is being redirected but not the windows parent). I have also thought about using a hidden input with a value based on the session which is then check with Body onLoad event but currently this doesnt work with how the pages have been setup. The last option I have is to check the session variable on loading the window and then closing it if the user is not logged in, which will cause the parent to refresh and redirect to login anyway. However I cant find a way to close a cfwindow without using javascript. Thanks for any help you can give.

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  • Why wont this compile its killing me. (java)

    - by Ryan The Leach
    import java.util.*; public class Caesar { public static void main(String [] args) { final boolean DEBUG = false; System.out.println("Welcome to the Caesar Cypher"); System.out.println("----------------------------"); Scanner keyboard = new Scanner (System.in); System.out.print("Enter a String : "); String plainText = keyboard.nextLine(); System.out.print("Enter an offset: "); int offset = keyboard.nextInt(); String cipherText = ""; for(int i=0;i<plainText.length();i++) { int chVal = plainText.charAt(i); if (DEBUG) {int debugchVal = chVal;} chVal +=offset; if (DEBUG) {System.out.print(chVal + "\t");} while (chVal <32 || chVal > 127) { if (chVal < 32) chVal += 96; if (chVal > 127) chVal -= 96; if(DEBUG) {System.out.print(chVal+" ");} } if (DEBUG) {System.out.println();} char c = (char) chVal; cipherText = cipherText + c; if (DEBUG) {System.out.println(i + "\t" + debugchVal + "\t" + chVal + "\t" + c + "\t" + cipherText);} } System.out.println(cipherText); } }

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  • BlueJ Chpt 4 - Auction Project - How to make removeLot method work after entering a new lot

    - by Ellaine Ryan
    Hi All I am learning Java through BlueJ I would like to add a removeLot method to the Auction Class in BlueJ Chpt 4. This involves also returning the lot with the given number or null if there is no such lot. If you enter , say 5 lots and then use the remove method, this codes removes whichever lot you specify. However if you enter a new lot after using the removeLot method - an internal error message comes up regarding lotnumbering . Any ideas? Thanks Elaine public Lot removeLot(int number) { if((number >= 1) ) { } Lot lot = getLot (number); if(lot !=null) { lots.remove(lot); } return lot; }

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  • JavaScript setInterval loop not holding variable

    - by Ryan
    Here is my code: var showNo = 1; window.setInterval(function() { console.log(showNo); if(showNo === 1) { var nextNo = 2; } else if(showNo === 2) { var nextNo = 3; } else if(showNo === 3) { var nextNo = 4; } else if(showNo === 4) { var nextNo = 5; } else if(showNo === 5) { var nextNo = 1; } else { var showNo = 1; var nextNo = 2; } var showNo = nextNo; }, 500); My question is, why is the showNo variable not holding when the setInterval loop starts? The console displays 'undefined' in the above example. This may be a simple question, but I am trying to teach myself query and this has me stuck.. Any answers would be great. Thanks.

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  • How would I create a silverlight control for tagging content similar to StackOverflow?

    - by Dan Ryan
    I am new to Silverlight. How would I go about creating a control for users to tag content. I would like it to work like it does it StackOverflow i.e. Autocomplete and when you press space it inserts the tag in a box with a remove button. I want the control to be bindable to a collection of strings. If someone can just point me in the right direction to get me started I would be very grateful.

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  • jQuery XML loading and then innerfade effect

    - by Ryan Max
    Hello, I think I can explain myself without code, so for brevity's sake here we go: I am using jquery to pull data from an xml and put it into a ul on the page with each xml entry as a li. This is working great! However, what I am trying to do afterwards is use the innerfade plugin to make a simple animation between each of the li's. It's not working though, as it is still just loading the static list with each item visible (whereas if innerfade was working it would only display the first....then fade into the second, etc) It's not an innerfade problem however, because if I add the list in manually to the page (not injecting it with jquery) then the innerfade works fine. I'm relatively new to DOM scripting, so I think I am missing something here. I'm not quite sure how jQuery sequences everything, and I'm having trouble phrasing my question in a search engine friendly manner so here I am. Is it possible to have jquery pull the data from xml, then inject it into the page, then have innerfade work it's magic? Or am I thinking about this the wrong way? xml code: $.ajax({ type: "GET", url: "xml/playlist.xml", dataType: "xml", success: function(xml) { $(xml).find('song').each(function(){ var name = $(this).attr('title'); var date = $(this).attr('artist'); var message = $(this).attr('path'); $('<li></li>').html('<span id="an_name">'+name+'</span><span id="an_date">'+date+'</span><span id="an_message">'+message+'</span>').appendTo('#anniversary'); }); } }); innerfade code: <script type="text/javascript"> jQuery.noConflict(); jQuery(document).ready( function(){ jQuery('#anniversary').innerfade({ speed: 1000, timeout: 5000, type: 'sequence', }); });

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  • Umbraco -- controlling access to media by membership

    - by Ryan
    I need to set up access to media files with the following structure: A media folder is designated as belonging to a specific member group. Then, a sub-folder below that needs to be available to a subset of members from the parent's member group. Any thoughts on how this can best be accomplished? I'll render the actual file download links with a user control, but how should I set up this access control on the back end? I need a member-group picker and a multiple member picker. Do these exist anywhere?

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