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  • Java: Match tokens between two strings and return the number of matched tokens

    - by Cryssie
    Need some help to find the number of matched tokens between two strings. I have a list of string stored in ArrayList (example given below): Line 0 : WRB VBD NN VB IN CC RB VBP NNP Line 1 : WDT NNS VBD DT NN NNP NNP Line 2 : WRB MD PRP VB DT NN IN NNS POS JJ NNS Line 3 : WDT NN VBZ DT NN IN DT JJ NN IN DT NNP Line 4 : WP VBZ DT JJ NN IN NN Here, you can see each string consists of a bunch of tokens separated by spaces. So, there's three things I need to work with.. Compare the first token (WRB) in Line 0 to the tokens in Line 1 to see if they match. Move on to the next tokens in Line 0 until a match is found. If there's a match, mark the matched tokens in Line 1 so that it will not be matched again. Return the number of matched tokens between Line 0 and Line 1. Return the distance of the matched tokens. Example: token NN is found on position 3 on line 0 and position 5 on Line 1. Distance = |3-5| = 2 I've tried using split string and store it to String[] but String[] is fixed and doesn't allow shrinking or adding of new elements. Tried Pattern Matcher but with disasterous results. Tried a few other methods but there's some problems with my nested for loops..(will post part of my coding if it will help). Any advice or pointers on how to solve this problem this would be very much appreciated. Thank you very much.

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  • Problem with giving focus to first element inside a container

    - by rahul
    Hi, I am just trying to cycle the focus between elements inside a particular element when the tab key is pressed. What I want to do is not to set focus to any element which is not a descendant of an element when tab is pressed from the last control inside the element. At that time the focus must be set to the first input element inside the container. I have done a sample and it its not working, and I am unable to figure out the issue. Sample can be found here The complete code is Script $(function(){ $(":input:last","#div1").bind("keydown", function(e){ if ( e.keyCode === 9 ) { var firstElem = $(":input:first","#div1"); firstElem.focus(); } }); }); CSS input.red { width: 200px; border: solid 1px red; } input { width: 200px; } HTML <input type="text" class="red" /> <div id="div1"> <input type="text" id="txt1" /> <select id="sel1"> <option>1</option> </select> <input type="text" id="txt2" /> </div> Any help would be appreciated. Thanks

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  • Returning recursive ternary freaks out

    - by David Titarenco
    Hi, assume this following function: int binaryTree::findHeight(node *n) { if (n == NULL) { return 0; } else { return 1 + max(findHeight(n->left), findHeight(n->right)); } } Pretty standard recursive treeHeight function for a given binary search tree binaryTree. Now, I was helping a friend (he's taking an algorithms course), and I ran into some weird issue with this function that I couldn't 100% explain to him. With max being defined as max(a,b) ((a)>(b)?(a):(b)) (which happens to be the max definition in windef.h), the recursive function freaks out (it runs something like n^n times where n is the tree height). This obviously makes checking the height of a tree with 3000 elements take very, very long. However, if max is defined via templating, like std does it, everything is okay. So using std::max fixed his problem. I just want to know why. Also, why does the countLeaves function work fine, using the same programmatic recursion? int binaryTree::countLeaves(node *n) { if (n == NULL) { return 0; } else if (n->left == NULL && n->right == NULL) { return 1; } else { return countLeaves(n->left) + countLeaves(n->right); } } Is it because in returning the ternary function, the values a => countLeaves(n->left) and b => countLeaves(n->right) were recursively double called simply because they were the resultants? Thank you!

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  • clean html a string by element id using php

    - by user327140
    Hi, as you can see by the subject am looking for a tool for cleaning up a HTML string in php using a HTML id property, example: According to the following PHP string I wish to clean the HTML erasing the black11 $test = ' <div id="block1"> <div id="block11">Hello1 <span>more html here...</span></div> <div id="block12">Hello2 <span>more html here...</span></div> </div> <div id="block2"></div> '; Will became $test = ' <div id="block1"> <div id="block12">Hello2 <span>more html here...</span></div> </div> <div id="block2"></div> '; I already tried the tool from htmlpurifier.org and can't get the desirable result. Only thing I achieved was removing elements by tag; erasing id; erasing class. Is there any simple way to achieve this using purifier or other? Thanks in advance,

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  • Virtual properties duplicated during serialization when XmlElement attribute used

    - by Laramie
    The Goal: XML serialize an object that contains a list of objects of that and its derived types. The resulting XML should not use the xsi:type attribute to describe the type, to wit the names of the serialized XML elements would be an assigned name specific to the derived type, not always that of the base class, which is the default behavior. The Attempt: After exploring IXmlSerializable and IXmlSerializable with eerie XmlSchemaProvider methods and voodoo reflection to return specialized schemas and an XmlQualifiedName over the course of days, I found I was able to use the simple [XmlElement] attribute to accomplish the goal... almost. The Problem: Overridden properties appear twice when serializing. The exception reads "The XML element 'overriddenProperty' from namespace '' is already present in the current scope. Use XML attributes to specify another XML name or namespace for the element." I attempted using a *Specified property (see code), but it didn't work. Sample Code: Class Declaration using System; using System.Collections.Generic; using System.Xml.Serialization; [XmlInclude(typeof(DerivedClass))] public class BaseClass { public BaseClass() { } [XmlAttribute("virt")] public virtual string Virtual { get; set; } [XmlIgnore] public bool VirtualSpecified { get { return (this is BaseClass); } set { } } [XmlElement(ElementName = "B", Type = typeof(BaseClass), IsNullable = false)] [XmlElement(ElementName = "D", Type = typeof(DerivedClass), IsNullable = false)] public List<BaseClass> Children { get; set; } } public class DerivedClass : BaseClass { public DerivedClass() { } [XmlAttribute("virt")] public override string Virtual { get { return "always return spackle"; } set { } } } Driver: BaseClass baseClass = new BaseClass() { Children = new List<BaseClass>() }; BaseClass baseClass2 = new BaseClass(){}; DerivedClass derivedClass1 = new DerivedClass() { Children = new List<BaseClass>() }; DerivedClass derivedClass2 = new DerivedClass() { Children = new List<BaseClass>() }; baseClass.Children.Add(derivedClass1); baseClass.Children.Add(derivedClass2); derivedClass1.Children.Add(baseClass2); I've been wrestling with this on and off for weeks and can't find the answer anywhere.

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  • Test Views in ASP.NET MVC2 (ala RSpec)

    - by Dmitriy Nagirnyak
    Hi, I am really missing heavily the ability to test Views independently of controllers. The way RSpec does it. What I want to do is to perform assertions on the rendered view (where no controller is involved!). In order to do so I should provide required Model, ViewData and maybe some details from HttpContextBase (when will we get rid of HttpContext!). So far I have not found anything that allows doing it. Also it might heavily depend on the ViewEngine being used. List of things that views might contain are: Partial views (may be nested deeply). Master pages (or similar in other view engines). Html helpers generating links and other elements. Generally almost anything in a range of common sense :) . Also please note that I am not talking about client-side testing and thus Selenium is just not related to it at all. It is just plain .NET testing. So are there any options to actually do the testing of views? Thanks, Dmitriy.

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  • In Netbeans+Ant, how do I avoid wsimport rebuilding web service clients every build?

    - by gustafc
    I'm on a project where we use NetBeans (6.8). We use several different web services, which we have added as web service references, and Netbeans auto-generates the Ant wsimport scripts for us. Very handy, with one drawback: The web service clients are recompiled every time ant is invoked. This slows down the build process considerably and has caused the number of sword-related injuries, maimings and deaths to skyrocket. Normally, I'd fix this by changing the wsimport element from <wsimport sourcedestdir="${build.generated.dir}/jax-wsCache/PonyService" destdir="${build.generated.dir}/jax-wsCache/PonyService" wsdl="${wsdl-PonyService}" catalog="catalog.xml" verbose="true"/> to <wsimport sourcedestdir="${build.generated.dir}/jax-wsCache/PonyService" destdir="${build.generated.dir}/jax-wsCache/PonyService" wsdl="${wsdl-PonyService}" catalog="catalog.xml" verbose="true"> <produces dir="${build.generated.dir}/jax-wsCache/PonyService" /> </wsimport> But I can't, 'cause this part of the Ant script is auto-generated. If I right-click the PonyService web service reference and select Edit Web Service Attributes ⇒ wsimport options, I can add attributes to the wsimport element, but not child elements. So: How do I add the produces child element to wsimport other than hacking the auto-generated Ant script? Or more generally: How do I make the NetBeans-generated wsimport not recompile the web service clients every time I build?

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  • jQuery date picker not persistant after AJAX

    - by ILMV
    So I'm using the jQuery date picker, and it works well. I am using AJAX to go and get some content, obviously when this new content is applied the bind is lost, I learnt about this last week and discovered about the .live() method. But how do I apply that to my date picker? Because this isn't an event therefore .live() won't be able to help... right? This is the code I'm using to bind the date picker to my input: $(".datefield").datepicker({showAnim:'fadeIn',dateFormat:'dd/mm/yy',changeMonth:true,changeYear:true}); I do not want to call this metho everytime my AJAX fires, as I want to keep that as generic as possible. Cheers :-) EDIT As @nick requested, below is my wrapper function got the ajax() method: var ajax_count = 0; function getElementContents(options) { if(options.type===null) { options.type="GET"; } if(options.data===null) { options.data={}; } if(options.url===null) { options.url='/'; } if(options.cache===null) { options.cace=false; } if(options.highlight===null || options.highlight===true) { options.highlight=true; } else { options.highlight=false; } $.ajax({ type: options.type, url: options.url, data: options.data, beforeSend: function() { /* if this is the first ajax call, block the screen */ if(++ajax_count==1) { $.blockUI({message:'Loading data, please wait'}); } }, success: function(responseText) { /* we want to perform different methods of assignment depending on the element type */ if($(options.target).is("input")) { $(options.target).val(responseText); } else { $(options.target).html(responseText); } /* fire change, fire highlight effect... only id highlight==true */ if(options.highlight===true) { $(options.target).trigger("change").effect("highlight",{},2000); } }, complete: function () { /* if all ajax requests have completed, unblock screen */ if(--ajax_count===0) { $.unblockUI(); } }, cache: options.cache, dataType: "html" }); } What about this solution, I have a rules.js which include all my initial bindings with the elements, if I were to put these in a function, then call that function on the success callback of the ajax method, that way I wouldn't be repeating code... Hmmm, thoughts please :D

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  • OutOfMemory during paging

    - by Tony
    Hi I am using ObjectDataSource, ListView, CustomPaging If the total number of rows is too big, I got OutOfMemory exception, it seems that it caused by some array, I don't get it, because total number of rows should never make any array to be filled with elements, the page size do!! This is the logger. ****EXCEPTION # 3 : 4/30/2010 9:43:07 PM System.Web.HttpUnhandledException: Exception of type 'System.Web.HttpUnhandledException' was thrown. --- System.OutOfMemoryException: Exception of type 'System.OutOfMemoryException' was thrown. at System.Web.UI.WebControls.ListView.CreateChildControls() at System.Web.UI.Control.EnsureChildControls() at System.Web.UI.WebControls.ListView.get_Controls() at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Control.LoadChildViewStateByIndex(ArrayList childState) at System.Web.UI.Control.LoadViewStateRecursive(Object savedState) at System.Web.UI.Page.LoadAllState() at System.Web.UI.Page.ProcessRequestMain(Boolean includeStagesBeforeAsyncPoint, Boolean includeStagesAfterAsyncPoint) --- End of inner exception stack trace --- at System.Web.UI.Page.HandleError(Exception e) at System.Web.UI.Page.ProcessRequestMain(Boolean includeStagesBeforeAsyncPoint, Boolean includeStagesAfterAsyncPoint) at System.Web.UI.Page.ProcessRequest(Boolean includeStagesBeforeAsyncPoint, Boolean includeStagesAfterAsyncPoint) at System.Web.UI.Page.ProcessRequest() at System.Web.UI.Page.ProcessRequestWithNoAssert(HttpContext context) at System.Web.UI.Page.ProcessRequest(HttpContext context) at ASP.default_aspx.ProcessRequest(HttpContext context) in c:\WINDOWS\Microsoft.NET\Framework\v2.0.50727\Temporary ASP.NET Files\flickrdemo\15752207\c63ea96c\App_Web__8yxn9sb.0.cs:line 0 at System.Web.HttpApplication.CallHandlerExecutionStep.System.Web.HttpApplication.IExecutionStep.Execute() at System.Web.HttpApplication.ExecuteStep(IExecutionStep step, Boolean& completedSynchronously)

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  • Problem Writing Linq2Xml Query

    - by Gavin Draper
    I'm trying to write a Linq2XML query to query the following XML. I need it to pull back all photos for a given GalleryID. <Albums> <Album GalleryId="1" Cover="AlbumCover1.jpg" Title="Album 1"> <Photos> <Photo Title="Image1" URL="img1.jpg" DateAdded="01/01/2010 09:20"/> <Photo Title="Image2" URL="img2.jpg" DateAdded="01/01/2010 09:20"/> <Photo Title="Image3" URL="img3.jpg" DateAdded="01/01/2010 09:20"/> </Photos> </Album> <Album GalleryId="2" Cover="AlbumCover1.jpg" Title="Album 2"> <Photos> <Photo Title="Image1" URL="img1.jpg" DateAdded="01/01/2010 09:20"/> <Photo Title="Image2" URL="img2.jpg" DateAdded="01/01/2010 09:20"/> </Photos> </Album> </Albums> The best I've come up with is XDocument xmlDoc = XDocument.Load(GalleryFilePath); var x = from c in xmlDoc.Descendants("Album") where c.Attribute("GalleryId").Equals(GalleryId) orderby c.Attribute("Title").Value descending select new { Title = c.Element("Photo").Attribute("Title"), URL = c.Element("Photo").Attribute("URL"), DateAdded = c.Element("Photo").Attribute("DateAdded") }; This returns nothing, I'm guessing this is because I'm telling it to query the Album element then trying to loop through the photo elements. Any tips as to how this should be done? Thanks

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  • Xpath fails if an element has a a xmlns attribute

    - by Callum Lamb
    Im trying to use xml to parse a .COLLADA file. The problem is I can't seem to use xpath() to access elements if the root tag has a xmlns attribute. For example this works: $string = <<<TEST <?xml version="1.0" encoding="utf-8"?> <COLLADA version="1.4.1"> <library_materials> <material id="Material" name="Material"> <instance_effect url="#Material-effect"/> </material> <material id="Material2" name="Material"> <instance_effect url="#Material-effect2"/> </material> </library_materials> </COLLADA> TEST; $lol = new SimpleXMLElement($string); print_r($lol->library_materials->xpath("material[@id='Material2']")); But this doesn't: $string = <<<TEST <?xml version="1.0" encoding="utf-8"?> <COLLADA xmlns="http://www.collada.org/2005/11/COLLADASchema" version="1.4.1"> <library_materials> <material id="Material" name="Material"> <instance_effect url="#Material-effect"/> </material> <material id="Material2" name="Material"> <instance_effect url="#Material-effect2"/> </material> </library_materials> </COLLADA> TEST; $lol = new SimpleXMLElement($string); print_r($lol->library_materials->xpath("material[@id='Material2']")); How does the xmlns suddenly make the xml tree unusable? I thought it just defined the namespace so you could tell it apart from other identical tags in other namespaces. What am I missing?

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  • How can I apply a PSSM efficiently?

    - by flies
    I am fitting for position specific scoring matrices (PSSM aka Position Specific Weight Matrices). The fit I'm using is like simulated annealing, where I the perturb the PSSM, compare the prediction to experiment and accept the change if it improves agreement. This means I apply the PSSM millions of times per fit; performance is critical. In my particular problem, I'm applying a PSSM for an object of length L (~8 bp) at every position of a DNA sequence of length M (~30 bp) (so there are M-L+1 valid positions). I need an efficient algorithm to apply a PSSM. Can anyone help improve performance? My best idea is to convert the DNA into some kind of a matrix so that applying the PSSM is matrix multiplication. There are efficient linear algebra libraries out there (e.g. BLAS), but I'm not sure how best to turn an M-length DNA sequence into a matrix M x 4 matrix and then apply the PSSM at each position. The solution needs to work for higher order/dinucleotide terms in the PSSM - presumably this means representing the sequence-matrix for mono-nucleotides and separately for dinucleotides. My current solution iterates over each position m, then over each letter in word from m to m+L-1, adding the corresponding term in the matrix. I'm storing the matrix as a multi-dimensional STL vector, and profiling has revealed that a lot of the computation time is just accessing the elements of the PSSM (with similar performance bottlenecks accessing the DNA sequence). If someone has an idea besides matrix multiplication, I'm all ears.

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  • Java Arrays.equals() returns false for two dimensional arrays.

    - by Achilles
    Hi there, I was just curious to know - why does Arrays.equals(double[][], double[][]) return false? when in fact the arrays have the same number of elements and each element is the same? For example I performed the following test. ` [java] double[][] a, b; int size =5; a=new double[size][size]; b=new double[size][size]; for( int i = 0; i < size; i++ ) for( int j = 0; j < size; j++ ){ a[i][j]=1.0; b[i][j]=1.0; } if(Arrays.equals(a, b)) System.out.println("Equal"); else System.out.println("Not-equal"); [/java] ` Returns false and prints "Not-equal. on the other hand, if I have something like this: [java] double[] a, b; int size =5; a=new double[size]; b=new double[size]; for( int i = 0; i < size; i++ ){ a[i]=1.0; b[i]=1.0; } if(Arrays.equals(a, b)) System.out.println("Equal"); else System.out.println("Not-equal"); } [/java] returns true and prints "Equal". Does the method only work with single dimensions? if so, is there something similar for multi-dimensional arrays in Java?

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  • How to pass parameters to manage_shared_memory.construct() in Boost.Interprocess

    - by recipriversexclusion
    I've stared at the Boost.Interprocess documentation for hours but still haven't been able to figure this out. In the doc, they have an example of creating a vector in shared memory like so: //Define an STL compatible allocator of ints that allocates from the managed_shared_memory. //This allocator will allow placing containers in the segment typedef allocator<int, managed_shared_memory::segment_manager> ShmemAllocator; //Alias a vector that uses the previous STL-like allocator so that allocates //its values from the segment typedef vector<int, ShmemAllocator> MyVector; int main(int argc, char *argv[]) { //Create a new segment with given name and size managed_shared_memory segment(create_only, "MySharedMemory", 65536); //Initialize shared memory STL-compatible allocator const ShmemAllocator alloc_inst (segment.get_segment_manager()); //Construct a vector named "MyVector" in shared memory with argument alloc_inst MyVector *myvector = segment.construct<MyVector>("MyVector")(alloc_inst); Now, I understand this. What I'm stuck is how to pass a second parameter to segment.construct() to specify the number of elements. The interprocess document gives the prototype for construct() as MyType *ptr = managed_memory_segment.construct<MyType>("Name") (par1, par2...); but when I try MyVector *myvector = segment.construct<MyVector>("MyVector")(100, alloc_inst); I get compilation errors. My questions are: Who actually gets passed the parameters par1, par2 from segment.construct, the constructor of the object, e.g. vector? My understanding is that the template allocator parameter is being passed. Is that correct? How can I add another parameter, in addition to alloc_inst that is required by the constructor of the object being created in shared memory? There's very little information other than the terse Boost docs on this.

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  • Finding the last focused element

    - by Joshua Cody
    I'm looking to determine which element had the last focus in a series of inputs, that are added dynamically by the user. This code can only get the inputs that are available on page load: $('input.item').focus(function(){ $(this).siblings('ul').slideDown(); }); And this code sees all elements that have ever had focus: $('input.item').live('focus', function(){ $(this).siblings('ul').slideDown(); }); The HTML structure is this: <ul> <li><input class="item" name="goals[]"> <ul> <li>long list here</li> <li>long list here</li> <li>long list here</li> </ul></li> </ul> <a href="#" id="add">Add another</a> On page load, a single input loads. Then with each add another, a new copy of the top unordered list's contents are made and appended, and the new input gets focus. When each gets focus, I'd like to show the list beneath it. But I don't seem to be able to "watch for the most recently focused element, which exists now or in the future." To clarify: I'm not looking for the last occurrence of an element in the DOM tree. I'm looking to find the element that currently has focus, even if said element is not present upon original page load. So in the above image, if I were to focus on the second element, the list of words should appear under the second element. My focus is currently on the last element, so the words are displayed there. Do I have some sort of fundamental assumption wrong?

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  • Visual Studio 2008 / ASP.NET 3.5 / C# -- issues with intellisense, references, and builds

    - by goober
    Hey all, Hoping you can help me -- the strangest thing seems to have happened with my VS install. System config: Windows 7 Pro x64, Visual Studio 2008 SP1, C#, ASP.NET 3.5. I have two web site projects in a solution. I am referencing NUnit / NHibernate (did this by right-clicking on the project and selecting "Add Reference". I've done this for several projects in the past). Things were working fine but recently stopped working and I can't figure out why. Intellisense completely disappears for any files in my App_Code directory, and none of the references are recognized (they are recognized by any file in the root directory of the web site project. Additionally, pretty simple commands like the following (in Page_Load) fail (assume TextBox1 is definitely an element on the page): if (Page.IsPostBack) { str test1; test1 = TextBox1.Text; } It says that all the page elements are null or that it can't access them. At first I thought it was me, but due to the combination of issues, it seems to be Visual Studio itself. I've tried clearing the temp directories & rebuilding the solution. I've also tried tools -- options -- text editor settings to ensure intellisense is turned on. I'd appreciate any help you can give! Thanks, Sean

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  • Checking parameter classes in PHP

    - by Professor Elm
    At the moment, I have the following: <?php if ($custom != ""): ?> <div class="head-row5" id="custom"> <?php print $custom?> </div><?php //head-row5 ?> <?php endif; ?> What is returned is something like.... <div class="block block-block" id="block-block-15"> <div class="title"> <h3></h3> </div> <div class="content"><p style="text-align: center;"><a href="website linkage" id="T2roll"><span class="alt">Name of the linked page</span></a></p> </div> What I'm trying to do is find a way to print this out ONLY if the is true. How would I go about doing this? I believe that I'm going to have to check the elements by class of this $custom parameter. However, I have no idea how to go about doing this.

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  • Best pattern to load enumerated values from DAL using WCF RIA Services

    - by Dale Halliwell
    I would like to be able to load several RIA entitysets in a single call without chaining/nesting several small LoadOperations together so that they load sequentially. I have several pages that have a number of comboboxes on them. These comboboxes are populated with static values from a database (for example status values). Right now I preload these values in my VM by one method that strings together a series of LoadOperations for each type that I want to load. For example: public void LoadEnums() { context.Load(context.GetMyStatusValues1Query()).Completed += (s, e) => { this.StatusValues1 = context.StatusValues1; context.Load(context.GetMyStatusValues2()).Completed += (s1, e1) => { this.StatusValues2 = context.StatusValues2; context.Load(context.GetMyStatusValues3Query()).Completed += (s2, e2) => { this.StatusValues3 = context.StatusValues3; (....and so on) }; }; }; }; While this works fine, it seems a bit nasty. Also, I would like to know when the last loadoperation completes so that I can load whatever entity I want to work on after this, so that these enumerated values resolve properly in form elements like comboboxes and listboxes. (I think) I can't do this easily above without creating a delegate and calling that on the completion of the last loadoperation. So my question is: does anyone out there know a better pattern to use, ideally where I can load all my static entitysets in a single LoadOperation?

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  • Bioperl, equivalent of IO::ScalarArray for array of Seq objects?

    - by Ryan Thompson
    In perl, we have IO::ScalarArray for treating the elements of an array like the lines of a file. In BioPerl, we have Bio::SeqIO, which can produce a filehandle that reads and writes Bio::Seq objects instead of strings representing lines of text. I would like to do a combination of the two: I would like to obtain a handle that reads successive Bio::Seq objects from an array of such objects. Is there any way to do this? Would it be trivial for me to implement a module that does this? My reason for wanting this is that I would like to be able to write a subroutine that accepts either a Bio::SeqIO handle or an array of Bio::Seq objects, and I'd like to avoid writing separate loops based on what kind of input I get. Perhaps the following would be better than writing my own IO module? sub process_sequences { my $input = $_[0]; # read either from array of Bio::Seq or from Bio::SeqIO my $nextseq; if (ref $input eq 'ARRAY') { my $pos = 0 $nextseq = sub { return $input->[$pos++] if $pos < @$input}; } } else { $nextseq = sub { $input->getline(); } } while (my $seq = $nextseq->()) { do_cool_stuff_with($seq) } }

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  • TranslateTransform for drag and drop in Silverlight

    - by fuzzyman
    We're trying to implement drag and drop in Silverlight (3). We want users to be able to drag elements from a treeview onto another part of a UI. The parent element is a Grid, and we've been trying to use a TranslateTransform along with the MouseLeftButtonDown, MouseMove (etc) events, as recommended by various online examples. For example: http://www.85turns.com/2008/08/13/drag-and-drop-silverlight-example/ We're doing this in IronPython, but that should be more or less irrelevant. The drag start is correctly initiated, but the item we are dragging appears in the 'wrong' location (offset a few hundred pixels to the right and down from the cursor) and I can't for the life of me work out why. Basic xaml: <Grid x:Name="layout_root"> <Grid.RowDefinitions> <RowDefinition/> <RowDefinition Height="120"/> </Grid.RowDefinitions> <Border x:Name="drag" Background="LightGray" Width="40" Height="15" Visibility="Collapsed" Canvas.ZIndex="10"> <Border.RenderTransform> <TranslateTransform x:Name="transform" X="0" Y="0" /> </Border.RenderTransform> <TextBlock x:Name="dragText" TextAlignment="Center" Foreground="Gray" Text="foo" /> </Border> ... </Grid> The startDrag method is triggered by the MouseLeftButtonDown event (on a TextBlock in a TreeViewItem.Header). onDrag is triggered by MouseMove. In the following code self.root is Application.Current.RootVisual (top level UI element from app.xaml): def startDrag(self, sender, event): self.root.drag.Visibility = Visibility.Visible self.root.dragText.Text = sender.Text position = event.GetPosition(self.root.drag.Parent) self.root.drag.transform.X = position.X self.root.drag.transform.Y = position.Y self.root.CaptureMouse() self._captured = True def onDrag(self, sender, event): if self._captured: position = event.GetPosition(self.root.drag.Parent) self.root.drag.transform.X = position.X self.root.drag.transform.Y = position.Y The dragged item follows the mouse move, but is offset considerably. Any idea what I am doing wrong and how to correct it?

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  • How do I find the object with the oldest updated_at column in RJS?

    - by user284194
    Hello, I'm trying to remove the object with the oldest updated_at value when the rjs is executed. page.insert_html :top, :messages, :partial => @message page[@message].visual_effect :grow page[:message_form].reset Message.old_messages.each do |m| page.remove(m.id) end page.delay(1) do page.select('.message').last.visual_effect :fade end I'm using .last in there right now, but I have a periodically_call_remote in the view that continually updates and runs the rjs above. The line: page.select('.message').last.visual_effect :fade seems to only execute the first time because after the message that is "last" fades away there's nothing recognized as "last" anymore so I figure instead of calling .last I could find the object that has the oldest updated_at time stamp and just remove that instead. I'm thinking that I probably cannot do this using page.select since it only calls on css elements. And therefore I probably don't have access to the updated_at values in the Message model. Does anyone have a suggestion on how to accomplish removing the oldest message with rjs? The messages are already automatically removed in the model as new messages are created. But I want them to fade automatically when the RJS refreshes the element.

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  • How to extract paragaph and selected lines with Perl

    - by neversaint
    I have a text that looks like this. What I want to do is to extract the whole paragraph under the section "Aceview summary" until the line that starts with "Please quote". extract the line that starts with "The closest human gene". And store them into array with two elements. However I am stuck with the following script logic. What's the right way to achieve that? #!/usr/bin/perl -w my $INFILE_file_name = $file; # input file name open ( INFILE, '<', $INFILE_file_name ) or croak "$0 : failed to open input file $INFILE_file_name : $!\n"; my @allsum; while ( <INFILE> ) { chomp; my $line = $_; my @temp1 = (); if ( $line =~ /^ AceView summary/ ) { print "$line\n"; push @temp1, $line; } elsif( $line =~ /Please quote/) { push @allsum, [@temp1]; @temp1 = (); } } close ( INFILE ); # close input file

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  • .NET: Problems creating email attachment from MemoryStream.

    - by David
    Hi all I'm using the following method to create an attachment from a MemoryStream: public void AddAttachment(Stream stream, string filename, string mimeType) { byte[] buffer = ((MemoryStream) stream).GetBuffer(); Attachment attachment = new Attachment(stream, filename, mimeType); _mail.Attachments.Add(attachment); } Note that the first line is not necessary isn't necessary for the attachment functionality, it's just useful to have the byte[] handy during debugging so that I can see how big it is. (It generally has around 80,000 elements.) The code runs fine and the email is sent. When Outlook receives the email, in the Inbox it displays the attachment symbol, but when you go into the email the attachment isn't there. Unfortunately I don't have access to the mail server to find out more about the email, e.g. what the attachment looks like, its size etc. Can anyone suggest what properties of the MemoryStream argument might tell me if it is in some way invalid for attachment? Or think of anything else I might try? Thank you. David

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  • PHP: How to store XML data in an array?

    - by tommy
    Below is the XML I am working with - there are more items - this is the first set. How can I get these elements in to an array? I have been trying with PHP's SimpleXML etc. but I just cant do it. <response xmlns:lf="http://api.lemonfree.com/ns/1.0"> <lf:request_type>listing</lf:request_type> <lf:response_code>0</lf:response_code> <lf:result type="listing" count="10"> <lf:item id="56832429"> <lf:attr name="title">Used 2005 Ford Mustang V6 Deluxe</lf:attr> <lf:attr name="year">2005</lf:attr> <lf:attr name="make">FORD</lf:attr> <lf:attr name="model">MUSTANG</lf:attr> <lf:attr name="vin">1ZVFT80N555169501</lf:attr> <lf:attr name="price">12987</lf:attr> <lf:attr name="mileage">42242</lf:attr> <lf:attr name="auction">no</lf:attr> <lf:attr name="city">Grand Rapids</lf:attr> <lf:attr name="state">Michigan</lf:attr> <lf:attr name="image">http://www.lemonfree.com/images/stock_images/thumbnails/2005_38_557_80.jpg</lf:attr> <lf:attr name="link">http://www.lemonfree.com/56832429.html</lf:attr> </lf:item> <!-- more items --> </lf:result> </response> Thanks guys EDIT: I want the first items data in easy to access variables, I've been struggling for a couple of days to get SimpleXML to work as I am new to PHP, so I thought manipulating an array is easier to do.

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  • A linked list with multiple heads in Java

    - by Emile
    Hi, I have a list in which I'd like to keep several head pointers. I've tried to create multiple ListIterators on the same list but this forbid me to add new elements in my list... (see Concurrent Modification exception). I could create my own class but I'd rather use a built-in implementation ;) To be more specific, here is an inefficient implementation of two basic operations and the one wich doesn't work : class MyList <E { private int[] _heads; private List<E _l; public MyList ( int nbHeads ) { _heads = new int[nbHeads]; _l = new LinkedList<E(); } public void add ( E e ) { _l.add(e); } public E next ( int head ) { return _l.get(_heads[head++]); // ugly } } class MyList <E { private Vector<ListIterator<E _iters; private List<E _l; public MyList ( int nbHeads ) { _iters = new Vector<ListIterator<E(nbHeads); _l = new LinkedList<E(); for( ListIterator<E iter : _iters ) iter = _l.listIterator(); } public void add ( E e ) { _l.add(e); } public E next ( int head ) { // ConcurrentModificationException because of the add() return _iters.get(head).next(); } } Emile

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