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• Embarrassingly parallel workflow creates too many output files

  - by Hooked

  On a Linux cluster I run many (N > 10^6) independent computations. Each computation takes only a few minutes and the output is a handful of lines. When N was small I was able to store each result in a separate file to be parsed later. With large N however, I find that I am wasting storage space (for the file creation) and simple commands like ls require extra care due to internal limits of bash: -bash: /bin/ls: Argument list too long. Each computation is required to run through a qsub scheduling algorithm so I am unable to create a master program which simply aggregates the output data to a single file. The simple solution of appending to a single fails when two programs finish at the same time and interleave their output. I have no admin access to the cluster, so installing a system-wide database is not an option. How can I collate the output data from embarrassingly parallel computation before it gets unmanageable?

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• Python grab class in class definition.

  - by epochwolf

  I don't even know how to explain this, so here is the code I'm trying. class Test: type = self.__name__ #self doesn't work, how do I get a reference to Test? class Test2(Test): pass #Test2.type should return "Test2" The reason I'm even trying this is I'm working on creating a base class for an orm I'm using. I want to avoid defining the table name for every model I have. Also knowing what the limits of python is will help me avoid wasting time trying impossible things.

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• POST data disapearing on large file upload

  - by DfKimera

  I'm having issues with a file uploading utility in my PHP application. When sending large files (9MB+) over the form, I get a very odd behaviour: the POST data I've included in the form dissapears, including the file information. I've already increased all PHP limits I could (time limit, max input time, post max size, memory limit and upload max filesize) and I still can't get the proper behaviour. I've tried replacing the regular HTTP forms with a Flash-based solution (SWFUpload, www.swfupload.org), still the same behaviour. I've tried multiple files of similar sizes and its definitely not a particular file issue. I've debugged the POST vars sent using Firebug, and the correct variables are still there in the header, together with the file. What could be going on here?

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• Oracle - Determine maximum supported size for regular expression

  - by FrustratedWithFormsDesigner

  I have a regular expression that throws ORA-12733, "regular expression is too long". How do I determine what the maximum supported size is? FYI: the offending regex is 892 characters. It's a generated regex, so I could change how I generate and execute it, but I would like to know what the limits to the max size are before I change how I am generating and executing. (running Oracle 10.2g) UPDATE: If it depends on the actual regex, here's the begining of it (the rest is just the same thing repeated, with different values between ^ and $): (^R_1A$|^R_2A$|^R_3A$|^R_4A$|^R_4B$|^R_5A$|^R_5B$...

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• How to limit data to users who own it without limiting admin users in CakePHP?

  - by cdburgess

  Currently I am writing an application where I have multiple users. They have data that should only be visible to them and not the other authenticated users in the system. I also have administrators who manage the system and have access to all of the information. What is the best way to limit users to their data without limiting admin users? Currently I am using a callback to limit the queries by user, but the admin will get the same limits. So I need to know a better way to do it. More importantly, the right way to do it. For example, I want the standard user to be able to see their user information only and be limited to CRUD operations on their information only. The admin, however, should be able to see ALL users and CRUD ALL user data. Any ideas?

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• Poll database using jQuery/Ajax

  - by Gav

  Hi guys, I am trying to use jQuery (latest version) & ajax to poll a mysql db every x seconds, post.php does a simple search query on the table and limits to 1 row. (eg SELECT id FROM TABLE LIMIT 1) I've got some other jQuery UI (using v1.8) code that displays some modal/dialog boxes on the screen, simply put if post.php returns something from the db I need to initialise the dialog to pop up onto the screen. I've done all the popup stuff I am just having issues joining all these bits together - i've added some pseudo code of how i expect this to work. Thanks in advance var refreshId = setInterval(function(){ $.ajax({ type: "POST", url: "post.php", data: "", success: function(html){ $("#responsecontainer").html(html); } }); }, 2000 );s /* proposed pseudocode */ if (ajax is successful & returns a db row to #responsecontainer) { show jQueryUI modal (done this bit already fortunately) }

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• How do I view how many concurrent long polling requests there are on my server?

  - by Pascal

  My host is Joyent. My host says I have 15 process limit and prstat -J shows those processes but that doesn't tell me how many long polling requests are currently being served. I could record it myself but that would add alot of performance overhead. I need to know when the server is at its long polling limits. I know this limit occurs far before the memory or CPU is used up. From experimentation, I've already verified that the number of long polls open is NOT equivalant to the number of processes running, probably because each process has multiple threads, each serving a request. thanks.

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• MS Access questions - Scalability / indexing / transactions

  - by oo

  A few questions on MS Access databases - Size: Are there limits to the size of an access database? The reason i ask is that we have an access database that has a few simple tables. The size of the db is about 1GB. When I do a query on it, i see it taking over 10 minutes to run. With proper indexing, should MS Access be able to handle this or are there fundamental limitations to the technology. This is MS Access XP. Also, does MS Access support db transactions, commit and rollback?

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• How to correctly and standardly compare floats?

  - by DIMEDROLL

  Every time I start a new project and when I need to compare some float or double variables I write the code like this one: if (fabs(prev.min[i] - cur->min[i]) < 0.000001 && fabs(prev.max[i] - cur->max[i]) < 0.000001) { continue; } Then I want to get rid of these magic variables 0.000001(and 0.00000000001 for double) and fabs, so I write an inline function and some defines: #define FLOAT_TOL 0.000001 So I wonder if there is any standard way of doing this? May be some standard header file? It would be also nice to have float and double limits(min and max values)

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• Java newbie problem: classes of the same package accessing one another?

  - by HH

  Test.java and SetWord.java belong to the package tools. Test.java needs to access SetWord but an odd error 'cannot find' SetWord appear. The package limits the visibility, it works without 'package tools;' lines. How can I acess the SetWords with Test in the same pkg? In general, how can classes access one another in the same pkg? Test.java package tools; import java.io.*; import java.util.*; public class Test{ public static void main(String[] args) { //IT CANNOT FIND SetWords despite the same folder, why? SetWord sw=new SetWord(); System.out.println(st.set("HELLO)"); } } SetWord.java package tools; import java.io.*; import java.util.*; public class SetWord{ public SetWord(){} public String set(String s) { return s.trim().toLowerCase(); } }

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• UIComponent's width and height have no effect on Sprite

  - by flexwheel

  Given this code: var circle:Sprite = new Sprite(); circle.graphics.beginFill(0xFFCC00); circle.graphics.drawCircle(0, 0, 20); var uiComp:UIComponent = new UIComponent(); uiComp.x = 100; uiComp.y = 100; uiComp.measuredHeight = 0; uiComp.measuredWidth = 0; uiComp.addChild(circle); addChild(uiComp); Why does changing the width and height of uiComp not affect the Sprite? Wouldn't UIComponent provide Sprite with a Graphics object, which limits that area where Sprite can draw?

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• How can i pass a single additional argument to array_map callback in PHP?

  - by Gremo

  How can i pass a single additional argument to array_map callback? In my example i'd like to pass $smsPattern (as a second argument, after current element in $featureNames) to the function array_map with $getLimit closure: $features = $usage->getSubscription()->getUser()->getRoles(); // SMS regular expression in the form of ROLE_SEND_SMS_X $smsPattern = '/^ROLE_SEND_SMS_(?P<l>\d+)$/i'; // Function to get roles names and X from a role name $getNames = function($r) { return trim($r->getRole()); }; $getLimit = function($name, $pattern) { if(preg_match($pattern, $name, $m)) return $m['l']; }; // Get roles names and their limits ignoring null values with array_filter $featuresNames = array_map($getNames, $features); $smsLimits = array_filter(array_map($getLimit, $featureNames, $smsPattern)); With this code i'm getting a weird warning: Warning: array_map() [function.array-map]: Argument #3 should be an array. Of course di reason is for reusing $getLimit closure with another regular expression like $smsPattern. Thanks.

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• How to make an application scriptable in Linux

  - by arx

  I've written an application in C++ that takes a complex binary file format and translates it into human-readable text. Having edited the text you can recompile it back into the binary file format. This would be more useful if the application's internal object model was scriptable. On Windows I'd expose the objects using COM or .Net but I want this to work on Linux. I could embed a scripting language but that's a fair bit of work, and limits users to the scripting language I choose. Ideally, I'm looking for some way of exposing a scriptable DOM from my application that is: Widely support in scripting languages (without writing language-specific wrappers) Cross-platform (but Linux support is most important) In-process (but this isn't essential)

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• HttpTunneling a TCPClient application

  - by user360116

  We have a custom chat application(c#) which uses TCPClient. We are having problem on clients who are behind Firewall or proxy. We know that these client can browse the internet without a problem so we decided to change our TCPClient application so that It uses HTTP messages to communicate. Will it be enough just to wrap our text massages with standard HTML tags and HTTP headers? We need a long lasting connection. Does keep-alive have a limit? Do firewalls or proxies have time limits for "alive" connections.

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• Physical Cores vs Virtual Cores in Parallelism

  - by Code Curiosity

  When it comes to virtualization, I have been deliberating on the relationship between the physical cores and the virtual cores, especially in how it effects applications employing parallelism. For example, in a VM scenario, if there are less physical cores than there are virtual cores, if that's possible, what's the effect or limits placed on the application's parallel processing? I'm asking, because in my environment, it's not disclosed as to what the physical architecture is. Is there still much advantage to parallelizing if the application lives on a dual core VM hosted on a single core physical machine?

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• What happens when I release a upgrade with higher targeted sdk as previous version?

  - by Peterdk

  SoundPool has a serious bug in it in Android 1.5. I fixed it with a workaround, but since it really limits my app, I want to target 1.6+ for the next version of it. I am wondering: What happens when I release a upgrade that has a higher target SDK version then the previous version of my app? Will only 1.6+ users be able to upgrade their app? Or will also the 1.5 users be able to upgrade since they have the program already installed? Anybody experience with this?

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• How taxing would a game map grid be to a web browser?

  - by Vilx-

  Suppose we're making a strategy game (think Civilization) in a web browser. The game has a visible map portion - say 30x30 squares. Each square is 30x30px and has several overlaid images - the terrain, resources, units, roads, etc. The classical way of drawing this would be with a huge <table> where each cell would contain absolutely positioned images. It would probably be rendered in Javascript to reduce traffic. But it's still several thousand images and a huge table. Can the browser take it? Will the performance not drop below any acceptable limits? Alternatively I could keep a pre-rendered map image with as many overlays as possible, but that would be more work, I think.

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• How to obtain multiple lines in a single density plot, with a corrected scale?

  - by user1677055

  I have recently started working with microarray datasets and am trying to get my hands on R. I wish to make some plots out of my result data, but however I am stuck at the following. I have the following data (myData), cpg samp1 samp2 samp3 cpg1 0.43 0.32 0.21 cpg2 0.43 0.22 1.00 cpg3 0.11 0.99 0.78 cpg4 0.65 0.32 0.12 cpg5 0.11 0.43 0.89 And I wish to obtain a density plot for this, I did the following, plot (density(MyData$samp1), col="red") lines (density(MyData$samp2), col="green") lines (density(MyData$samp3), col="blue") But doing this does not give me correct plots, because not all sample curves fit within the plot limits. I did try looking for answers, but honestly i am still not able to work this out. Can you help me know how do i set my scale for the above? Or what additional should I do to the above code, so that all the curves are in range?? I have got many samples, so i need a something that could also automatically assign a different colour curve for each of my sample, after scaling it right. Thanks in advance..

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• Tools for viewing logs of unlimited size

  - by jkff

  It's no secret that application logs can go well beyond the limits of naive log viewers, and the desired viewer functionality (say, filtering the log based on a condition, or highlighting particular message types, or splitting it into sublogs based on a field value, or merging several logs based on a time axis, or bookmarking etc.) is beyond the abilities of large-file text viewers. I wonder: Whether decent specialized applications exist (I haven't found any) What functionality might one expect from such an application? (I'm asking because my student is writing such an application, and the functionality above has already been implemented to a certain extent of usability)

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• How do I password protect IIS in a method analogous to Apache's AuthType / AuthUserFile mechanism?

  - by Matt

  I'm used to doing basic password protection for Apache w/ the following method in Apache config files: AuthType Basic AuthName "By Invitation Only" AuthUserFile /path/to/.htpasswd Require valid-user However, I've been asked to put some protection on a subdirectory of a site running ColdFusion on top of IIS6, and I'm unfamiliar with how to do this. How is this done? What should I look out for? I just need to password protect an administrative subdirectory, so I don't need a full user login system - just something that limits who can access the section of the site.

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• What is a good standard for code width?

  - by BillyONeal

  Hello everyone :) I've heard in several places that it's bad to have code that is too wide onscreen. For example: for (std::vector<EnumServiceInformation>::const_iterator currentService = services.begin(); currentService != services.end(); currentService++) However, I've heard many arguments for 80 character wide limits. I'm assuming this 80 character limit comes from the traditional command prompt, which is typically 80 characters wide. However -- most of us are working on something much better than a typical command prompt, and I feel that using an 80 character limit encourages use of variable names that are far too short and do not describe what the variable is used for. What is a reasonable limit for a new project with no existing coding width standard?

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• casting issue with realpath function (c programming)

  - by Ralph

  When I compile the following code: #define _POSIX_C_SOURCE 200112L #define _ISOC99_SOURCE #define __EXTENSIONS__ #include <stdio.h> #include <limits.h> #include <stdlib.h> int main(int argc, char *argv[]) { char *symlinkpath = argv[1]; char actualpath [PATH_MAX]; char *ptr; ptr = realpath(symlinkpath, actualpath); printf("%s\n", ptr); } I get a warning on the line that contains the call to the realpath function, saying: warning: assignment makes pointer from integer without a cast Anybody know what's up? I'm running Ubuntu Linux 9.04

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• Replacing a C++ ActiveX component with a .NET implementation?

  - by Leon Breedt

  I have existing managed and unmanaged software using an ActiveX component supplied by a third party to perform some communications, but it is now required that this communication be routed through my application. Ideally I'd be able to install a .NET component which will expose exactly the same interface, and will be usable as a drop-in replacement. However, I am running into the limits of my understanding of COM, which admittedly is quite minimal. How best to ensure that my implementation of the interface is 100% binary compatible with the existing object? How do I ensure that applications use my implementation of the interface instead of the legacy implementation? Is it simply a matter of registering my implementation, and unregistering the legacy one? How do I ensure it's a "drop-in" replacement, and requires no changes to existing software? How do I ensure unmanaged code can use it without issue? Note: I am able to require that .NET 4.0 be used, if that will make things simpler.

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• Is it safe to develop for older versions of Zend Framework?

  - by RenderIn

  Our vendor-supported server's O/S only supports PHP 5.1.6, which limits us to ZF 1.6. The current version of Zend Framework requires a higher version of PHP. We're struggling to decide whether to adopt ZF because of this incompatibility. Is it feasible to develop (indefinitely) in these older versions of ZF or should we hold off? Features, security, bugs, etc. Is this a path we don't want to go down or are these older versions perfectly usable in a production environment?

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• How to get available memory C++/g++ ?

  - by Agito

  I want to allocate my buffers according to memory available. Such that, when I do processing and memory usage goes up, but still remains in available memory limits. Is there a way to get available memory (I don't know will virtual or physical memory status will make any difference ?). And method has to be platform Independent as its going to be used on Windows, OS X, Linux and AIX. (And if possible then I would also like to allocate some of available memory for my application, someone it doesn't change during the execution).

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