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  • Finding What You Need in R: function arguments/parameters from outside the function's package

    - by doug
    Often in R, there are a dozen functions scattered across as many packages--all of which have the same purpose but of course differ in accuracy, performance, theoretical rigor, and so on. How do you gather all of these in one place before you start your task? So for instance: the generic plot function. Setting secondary ticks is much easier (IMHO) using a function outside of the base package, minor.tick(nx=n, ny=n, tick.ratio=n), found in Hmisc. Of course, that doesn't show up in plot's docstring. Likewise, the data-input arguments to 'plot' can be supplied by an object returned from the function 'hexbin', again, from a library outside of the base installation (where 'plot' resides). What would be great obviously is a programmatic way to gather these function arguments from the various libraries and put them in a single namespace. edit: (trying to re-state my example just above more clearly:) the arguments to plot supplied in the base package for, e.g., setting the axis tick frequency are xaxp/yaxp; however, one can also set a/t/f via a function outside of the base package, again, as in the minor.tick function from the Hmisc package--but you wouldn't know that just from looking at the plot method signature. Is there a meta function in R for this? So far, as i come across them, i've been manually gathering them in a TextMate 'snippet' (along with the attendant library imports). This isn't that difficult or time consuming, but i can only update my snippet as i find out about these additional arguments/parameters. Is there a canonical R way to do this, or at least an easier way? Just in case that wasn't clear, i am not talking about the case where multiple packages provide functions directed to the same statistic or view (e.g., 'boxplot' in the base package; 'boxplot.matrix' in gplots; and 'bplots' in Rlab). What i am talking is the case in which the function name is the same across two or more packages.

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  • flex 4 release changes to application are not showing up.

    - by guacamoly
    I just took over a clients flex project and I can't get the app to reflect even a simple trace statement. Before I took over, the project was last successfully built using the Flash Builder Beta 2 environment/sdk. I have the latest release version of Flash Builder 4. Upon importing the project into FB4, I got a ton of errors. Most of them mostly because of the changes made to the sdk from beta2 to release. Some of the things I corrected: - mx namespace from library://ns.adobe.com/flex/halo to library://ns.adobe.com/flex/mx - video player skinning: a lot of the state names for the video player component had been changed, more required states had been added. also there were other video related component and property names that had to be updated. But I fixed all that and the application was finally able to compile (although with some warnings mostly of the duplicate variable type) The only thing now is that whatever change I make to the project doesn't get reflected in the build (debug or release). I changed existing traces, added additional traces. Nothing shows up. I even removed the applicationComplete property in the main.mxml. Everything still ran like nothing changed. Also I can't seem to debug the app. Whenever I try to debug.. flash builder says.. "Swf Application doesn't contain the required debugging information ... " Anyone have any idea how I need to even begin tackling all this? Any help or pointers would be greatly appreciated.

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  • Plotting a graph with GD

    - by Nayena
    Here it goes. I have been thinking about this for a long time, and havent really been able to put up a proper way to do it yet. I havent implemented anything yet, as im still designing the thing. The idea is that i crawl a website for internal links, i got this settled, its easy, but after the crawling, i end up with an array with lots of links, and how many times those particular link appears on the site that i crawled (and how they're connected). With this huge array, i want to draw a graph somehow. Assuming i can handle the data correctly, the real question here is how i can draw this in a image by the use of the GD library. I figured if theres less than 12 elements, i can align them up on a unit circle spacing them up as a circle and then connecting them accordingly, so anything up to 12 elements shouldn't be a problem, but if theres more than 12, it could be awesome getting them lined up like this Or well, thats just a rough drawing, but i guess its just to prove a point. So i'm here looking for guidance or tips towards getting the math down to getting the stuff lined up in a good way. I have previously made bar-graphs, so i have little experience doing math with GD. If possible, id prefer not using some plotter-library - in the end, it gives me a better understanding on how things are supposed to be.

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  • PHP file outside doc root needs files outside and inside the document root

    - by jax
    I have a library of classes, all interrelated. Some files are inside the document root and some are outside using the <Directory> and Alias features in httpd.conf Assuming I have 3 files: webroot.php (Inside the document root) alias_directory.php (Inside a folder outside the doc root) alias_directory2.php (Inside a **different** folder outside the doc root) If alias_directory2.php needs both webroot.php and alias_directory.php, This does not work. (Remember alias_directory.php and alias_directory2.php are not in the same locations) require_once $_SERVER['DOCUMENT_ROOT'].'/webroot.php'; //(ok) require_once $_SERVER['DOCUMENT_ROOT'].'/alias_directory.php'; //(not ok) This does not work because alias_directory.php is not in the doc root. Similarly require_once $_SERVER['DOCUMENT_ROOT'].'/webroot.php'; //(ok) require_once dirname(__FILE__).'/alias_directory.php'; //(not ok) The problem here is that dirname(__FILE__) will return the path for alias_directory2.php not alias_directory.php. This works: require_once $_SERVER['DOCUMENT_ROOT'].'/webroot.php'; //(ok) require_once '/full/path/to/directory/alias_directory.php'; //(ok) But is very nasty and is a maintenance nightmare if I decide to move my library to another location. How do I solve this problem, is seems that I need a way to resolve an Alias folder properly.

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  • how to redirect user depending on user type at time of login (codeignitor)

    - by Anam Tahir
    im facing problem while redirecting my user according to its type. how can do it here's my code plz suggest how to do it. <?php if ( ! defined('BASEPATH')) exit('No direct script access allowed'); class VerifyLogin extends CI_Controller { function __construct() { parent::__construct(); } function index() { $this->load->model('user','',TRUE); //This method will have the credentials validation $this->load->library('form_validation'); $this->load->library('session'); $this->form_validation->set_rules('username', 'Username','trim|required|xss_clean'); $this->form_validation->set_rules('password', 'Password' 'trim|required|xss_clean|callback_check_database'); if($this->form_validation->run() == FALSE) { //Field validation failed.&nbsp; User redirected to login page validation_errors(); $this->load->view('error'); } else { //Go to private area basically here i want to redirect if user is admin then redirect to admin page else redirect to home how can i do this ??? redirect('home', 'refresh'); } } function check_database($password) { //Field validation succeeded.&nbsp; Validate against database $username = $this->input->post('username'); //query the database $result = $this->user->login($username, $password); if($result) { $sess_array = array(); foreach($result as $row) { $sess_array = array( 'id' => $row->id, 'username' => $row->username ); $this->session->set_userdata('logged_in', $sess_array); } return TRUE; } else { $this->form_validation->set_message('check_database', 'Invalid username or password'); return false; } } } ?>

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  • Creating a web application that can be extended by plugins/modules

    - by Adam Pope
    I'm currently involved with developing a C# CMS-like web application which will be used to standardise our development of websites. From the outset, the idea has been to keep the core as simple as possible to avoid the complexity and menu/option overload that blights many CMS systems. This simple core is now complete and working very well. We envisisaged that the system would be able to accept plugins or modules which would extend the core functionality to suit a given projects needs. These would also be re-usable across projects. For example, a basic catalogue and shopping basket might be needed. All the code for such extensions should be in seperate assemblies. They should be able to provide their own admin interfaces and front-end code from this library. The system should search for available plugins and give the admin user the option to enable/disable the feature. (This is all very much like WordPress plugins) It is crucial that we attack this problem in the correct way, so I'm trying to perform as much due dilligence as possible before jumping in. I am aware of the Plugin Pattern (http://msdn.microsoft.com/en-us/library/ms972962.aspx) and have read some articles on it's use. It seems reasonable but I'm not convinced it's necessarily the correct/best technique for this situation. It seems more suited to processing applications (image/audio manipulation, maths etc). Are there any other options for achieving this kind of UI extensibility functionality? Or is the plugin pattern the way to go? I'd also be interested if anybody has links to articles that explain using the plugin pattern for this purpose?

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  • Solving quadratic programming using R

    - by user702846
    I would like to solve the following quadratic programming equation using ipop function from kernlab : min 0.5*x'*H*x + f'*x subject to: A*x <= b Aeq*x = beq LB <= x <= UB where in our example H 3x3 matrix, f is 3x1, A is 2x3, b is 2x1, LB and UB are both 3x1. edit 1 My R code is : library(kernlab) H <- rbind(c(1,0,0),c(0,1,0),c(0,0,1)) f = rbind(0,0,0) A = rbind(c(1,1,1), c(-1,-1,-1)) b = rbind(4.26, -1.73) LB = rbind(0,0,0) UB = rbind(100,100,100) > ipop(f,H,A,b,LB,UB,0) Error in crossprod(r, q) : non-conformable arguments I know from matlab that is something like this : H = eye(3); f = [0,0,0]; nsamples=3; eps = (sqrt(nsamples)-1)/sqrt(nsamples); A=ones(1,nsamples); A(2,:)=-ones(1,nsamples); b=[nsamples*(eps+1); nsamples*(eps-1)]; Aeq = []; beq = []; LB = zeros(nsamples,1); UB = ones(nsamples,1).*1000; [beta,FVAL,EXITFLAG] = quadprog(H,f,A,b,Aeq,beq,LB,UB); and the answer is a vector of 3x1 equals to [0.57,0.57,0.57]; However when I try it on R, using ipop function from kernlab library ipop(f,H,A,b,LB,UB,0)) and I am facing Error in crossprod(r, q) : non-conformable arguments I appreciate any comment

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  • non-cached RSLs in Flex?

    - by SteMa
    I have a project that is for several customers, the only difference is in the DB, everything else looks the same, except for the main page's text. That is loaded from an external swf file. I created a library, compiled it as an swc, imported it and using it as an RSL. The problem is that if once I've opened the page, and afterwards update the rsl (because changes in the text are needed), than it's already cached by the browser (not the flashplayer's cache but we shouldn't discuss this please!) and the updated swf won't be loaded. If I use it as an external, the page won't even start up (the browser says it's loaded, but it's blank, not even the loading progess bar of flex appear) <local:MainPage includeIn="default" currentState="{MainPageState}" id="Page" width="100%" height="100%" /> this is the code on the main page, if I comment this out, than the whole thing loads, even with the use of the "external" link-type. If it helps, in the design view, I see the component, but I get a warning for the library: Design mode could not load MainPage.swc. It may be incompatible with this SDK, or invalid. (DesignAssetLoader.CompleteTimeout)

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  • Uploading multiple files asynchronously by blueimp jquery-fileupload

    - by Ryo
    I'm using jQuery File Upload library (http://github.com/blueimp/jQuery-File-Upload), and I've been stuck figuring out how to use the library satisfying the following conditions. The page has multiple file input fields surrounded by a form tag. Users can attach multiple files to each input field All files are sent to a server when the button is clicked, not when files are attached to the input fields. Upload is done asynchronously Say the page has 3 input fields with their name attributes being "file1[]", "file2[]" and "file3[]", the request payload should be like {file1: [ array of files on file1[] ], file2: [ array of files on file2[] ], ...} Here's jsFiddle, it's behaving weird so far in that it sends post request twice and the first one is cancelled. http://jsfiddle.net/BAQtG/24/ The core part of js code looks like this. $(document).ready(function(){ var filesList = [] var elem = $("form") file_upload = elem.fileupload({ formData:{extra:1}, autoUpload: false, fileInput: $("input:file"), }).on("fileuploadadd", function(e, data){ filesList.push(data.files[0]) }); $("button").click(function(){ file_upload.fileupload('send', {files:filesList} ) }) }) Anybody have idea how to get this to work? Updates Now thanks to @CBroe 's comment, the issue that request is sent twice is fixed. However the keys of request parameter is not correctly set. Here's updated jsFiddle. http://jsfiddle.net/BAQtG/27/

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  • Flash - can't access classes in another SWF

    - by Ashley Muller
    Hi, I'm trying to load a local SWF file and use the classes in that SWF (its a code only SWF, nothing in library). Here's the code that loads the library: var AD:ApplicationDomain = ApplicationDomain.currentDomain; var context:LoaderContext = new LoaderContext(false, AD); SA_gamecore_loader = new Loader(); SA_gamecore_loader.contentLoaderInfo.addEventListener(Event.COMPLETE, onGameCoreLibraryDataComplete); SA_gamecore_loader.load(new URLRequest("GameCore.swf"), context); Here's the code that tries to instantiate a class from GameCore.swf: var test:Class = GetClassFromDefinition("MenuArt") as Class; var testInstance:Object = new test(); public function GetClassFromDefinition(theStr:String):Object { var theClass:Object; try { theClass = GameCoreLibraryData.applicationDomain.getDefinition(theStr); } catch(e:ReferenceError) { trace(e); return null; } return theClass; } And this is the message that's traced: ReferenceError: Error #1065: Variable MenuArt is not defined. The GameCore.swf is in the same location as the parent swf. I'm using Flash Develop if that helps. Anyone able to point out what I'm doing wrong?

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  • ItemUpdating called twice after ItemAdded in event receiver

    - by Jason
    I've created an event receiver to handle the ItemAdded and ItemUpdating events on a document library in SharePoint 2010. I've encountered a problem where when I add a document to the library (e.g. by saving it back from Word) the ItemAdded method is correctly called however this is then followed by two calls to ItemUpdating. I have removed all code from my handlers to ensure that it's not something I'm doing inside that is causing the problem. They literally look like: public override void ItemUpdating(SPItemEventProperties properties) { } public override void ItemAdded(SPItemEventProperties properties) { } Does anyone have a solution to this issue? Here is my elements.xml file for the event receiver: <Elements xmlns="http://schemas.microsoft.com/sharepoint/"> <Receivers ListTemplateId="101"> <Receiver> <Name>DocumentsEventReceiverItemUpdating</Name> <Type>ItemUpdating</Type> <Assembly>$SharePoint.Project.AssemblyFullName$</Assembly> <Class>My.Namespace.DocumentsEventReceiver</Class> <SequenceNumber>10000</SequenceNumber> <Synchronization>Synchronous</Synchronization> </Receiver> <Receiver> <Name>DocumentsEventReceiverItemAdded</Name> <Type>ItemAdded</Type> <Assembly>$SharePoint.Project.AssemblyFullName$</Assembly> <Class>My.Namespace.DocumentsEventReceiver</Class> <SequenceNumber>10000</SequenceNumber> <Synchronization>Synchronous</Synchronization> </Receiver> </Receivers> </Elements>

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  • Question about using an access database as a resource file in Visual Studio.

    - by user354303
    Hi I am trying to embed a Microsoft Access database file into my Class assembly DLL. I want my code to reference the resource file and use it with a ADODB.Connection object. Any body know a simpler way, or an easier way? Or what is wrong with my code, when i added the resource file it added me dataset definitions, but i have no idea what to do with those. The connection string I am trying below is from an automatically generated app.config. I did add the item as a resource... using System; using System.Collections.Generic; using System.Linq; using System.Text; using System.Data; using ConsoleApplication1.Resources;//SPPrinterLicenses using System.Data.OleDb; using ADODB; using System.Configuration; namespace ConsoleApplication1 { class SharePointPrinterManager { public static bool IsValidLicense(string HardwareID) { OleDbDataAdapter da = new OleDbDataAdapter(); DataSet ds = new DataSet(); ADODB.Connection adoCn = new Connection(); ADODB.Recordset adoRs = new Recordset(); //**open command below fails** adoCn.Open( @"Provider=Microsoft.ACE.OLEDB.12.0;Data Source=|DataDirectory|\Resources\SPPrinterLicenses.accdb;Persist Security Info=True", "", "", 1); adoRs.Open("Select * from AllWorkstationLicenses", adoCn, ADODB.CursorTypeEnum.adOpenForwardOnly, ADODB.LockTypeEnum.adLockReadOnly, 1); da.Fill(ds, adoRs, "AllworkstationLicenses"); adoCn.Close(); DataTable dt = new DataTable(); //ds.Tables. return true; } } }

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  • How to provide i18n service for developer and end user

    - by user247245
    Many android applications have quite poor i18n-support, and for an understandable reason, as it adds much work for the developer. From a both intuitive and cultural point of view it would be a good thing if end-users could translate the apps themself, and OTA share the translation, without reinstalling the app itself. In concept; as wikipedia, some add content easily, others only use what's there. It's of course important that the service is as easy as possible to use, both for app-developers, and people willing to transcribe. To keep it simple, this is the solution I'm concidering; Developer perspective: Developer uses a customized setContentView when open activities/layouts that will seach for thanslations of xml-entries. (below) The customized version is provided as a free downloadable library/class..., turning the i18n feature to more or less a one liner. User perspective: User downloads app without any translation As app launches, it checks locale running at phone, and will look for a translated xml-file at shared space in SD. If no or old transcribed xml (above), try to download new from internet-service (ansync). This is all done by library above, no need for intents. Translator perspective: Separate app to provide translations for any app using the i18n service above. (Could be just a webapp), with some form of QA on translators/input. QUESTION: Now, for this to work efficiently, it has to be AeasyAP for the developer to even bother, and the most fluent solution would be a customized version of setContentView, that simply loads the translated values from external xml, instead of the ones in the apk. Is this possible at all, and if not, what's your suggested solutions? (And of course, Happy New Year, feliz ano novo, blwyddyn newydd dda, Gott Nytt År, kontan ane nouvo, szczesliwego nowego roku ...) Regards, /T

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  • How to marshal an object and its content (also objects)

    - by Waldo Spek
    I have a question for which I suspect the answer is a bit complex. At this moment I am programming a DLL (class library) in C#. This DLL uses a 3rd party library and therefore deals with 3rd party objects of which I do not have the source code. Now I am planning to create another DLL, which is going to be used in a later stadium in my application. This second DLL should use the 3rd party objects (with corresponding object states) created by the first DLL. Luckily the 3rd party objects extend the MarshalByRefObject class. I can marshal the objects using System.Runtime.Remoting.Marshal(...). I then serialize the objects using a BinaryFormatter and store the objects as a byte[] array. All goes well. I can deserialize and unmarshal in a the opposite way and end up with my original 3rd party objects...so it appears... Nevertheless, when calling methods on my 3rd party deserialized objects I get object internal exceptions. Normally these methods return other 3rd party objects, but (obviously - I guess) now these objects are missing because they weren't serialized. Now my global question: how would I go about marshalling/serializing all the objects which my 3rd party objects reference...and cascade down the "reference tree" to obtain a full and complete serialized object? Right now my guess is to preprocess: obtain all the objects and build my own custom object and serialize it. But I'm hoping there is some other way...

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  • Problem using a COM interface as parameter

    - by Cesar
    I have the following problem: I have to projects Project1 and Project2. In Project1 I have an interface IMyInterface. In Project2 I have an interface IMyInterface2 with a method that receives a pointer to IMyInterface1. When I use import "Project1.idl"; in my Project2.idl, a #include "Project1.h" appears in Project2___i.h. But this file does not even exist!. What is the proper way to import an interface defined into other library into a idl file? I tried to replace the #include "Project1.h" by *#include "Project1_i.h"* or *#include "Project1_i.c"*, but it gave me a lot of errors. I also tried to use importlib("Project1.tlb") and define my interface IMyInterface2 within the library definition. But when I compile Project2PS project, an error is raised (something like dlldata.c is not generated if no interface is defined). I tried to create a dummy Project1.h. But when Project2___i.h is compiled, compiler cannot find MyInterface1. And if I include Project1___i.h I get a lot of errors again! Apparently, it is a simple issue, but I don't know how to solve it. I'm stuck with that!. By the way, I'm using VS2008 SP1. Thanks in advance.

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  • Is there any PDF parser written in objective-c or c?

    - by user549683
    I'm writing a pdf reader iPhone application. I know how to show pdf file in view using CGPDF** classes in iOS. What I want to do now is to search text in pdf file, and highlight the searched text. So, I need a library which can detect what text is in what position. Besides, I want the library able to handle unicode and Chinese characters. I've searched for a few days but still cannot find anything suitable. I've tried xpdf, but it is written in c++. I don't know how to use c++ code in iPhone app. I've also tried http://www.codeproject.com/KB/cpp/ExtractPDFText.aspx but it does not handle Chinese characters. I've tried to code by myself, but the encoding in PDF is really complicated. For example, I don't know what to refer to when I want to decode the text by the following font: 8 0 obj << /Type /Font /Subtype /Type0 /Encoding /Identity-H /BaseFont /RNXJTV+PMingLiU /DescendantFonts [ 157 0 R ] >> endobj 157 0 obj << /Type /Font /Subtype /CIDFontType2 /BaseFont /RNXJTV+PMingLiU /CIDSystemInfo << /Registry (Adobe) /Ordering (CNS1) /Supplement 0 >> /FontDescriptor 158 0 R /W 161 0 R /DW 1000 /CIDToGIDMap 162 0 R >> endobj 158 0 obj << /Type /FontDescriptor /Ascent 801 /CapHeight 711 /Descent -199 /Flags 32 /FontBBox [0 -199 999 801] /FontName /RNXJTV+PMingLiU /ItalicAngle 0 /StemV 0 /Leading 199 /MaxWidth 1000 /XHeight 533 /FontFile2 159 0 R >> endobj

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  • Flex 4 hideEffect transition bug

    - by xerious87
    I'm trying to create a slide effect. Everything works fine except when the hideEffect animation is shown for the first time. The content does not become invisible when crossing the TabNavigator's border, which looks really ugly in my current project. The following simple example demonstrates the problem: <?xml version="1.0" encoding="utf-8"?> <s:Application xmlns:fx="http://ns.adobe.com/mxml/2009" xmlns:s="library://ns.adobe.com/flex/spark" xmlns:mx="library://ns.adobe.com/flex/mx" minWidth="955" minHeight="600" backgroundColor="0xDDDDDD"> <fx:Declarations> <s:Move id="hideEffect" xTo="700" /> </fx:Declarations> <mx:TabNavigator width="500" height="300" x="100" y="0"> <s:NavigatorContent label="ONE" hideEffect="{hideEffect}"> <s:BorderContainer backgroundColor="0xFF0000" height="100" width="100"/> </s:NavigatorContent> <s:NavigatorContent label="TWO" hideEffect="{hideEffect}"> <s:BorderContainer backgroundColor="0xFF0000" height="100" width="100"/> </s:NavigatorContent> <s:NavigatorContent label="THREE" hideEffect="{hideEffect}"> <s:BorderContainer backgroundColor="0xFF0000" height="100" width="100"/> </s:NavigatorContent> <s:NavigatorContent label="FOUR" hideEffect="{hideEffect}"> <s:BorderContainer backgroundColor="0xFF0000" height="100" width="100"/> </s:NavigatorContent> </mx:TabNavigator> </s:Application> Screenshot: hideEffectBug Any ideas how to fix this bug?

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  • Updating iOS application content which include images

    - by azamsharp
    I am working on a Vegetable gardening application. Apart from the vegetable name and description I also have vegetable image. Currently, I have all the images in the Supported Files folder in the Xcode project. But later on I want to update the application dynamically without having the user download a new version. When the user updates the application or downloads new data from the server that data will include the images. Can I store those images in the supporting file folder or somewhere where they can be references by just the name. RELATED QUESTION: I will also allow the user to take pictures of their vegetables and then write notes about the vegetables like "just planted", "about to harvest" etc. What is the recommended approach for storing pictures/photos. I can always store them in the user's photo library and then store the reference in the local database and then fetch and display the picture using the reference. The problem with that approach might be that if the user accidentally deletes the picture from the library then it will no longer be displayed in my application. The only way I see if to store the picture in the app local database as a BLOB.

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  • Javascript Graph Layout Engine

    - by GJK
    I'm looking for a Javascript library/engine that can do graph layouts. (And when I say layouts, I mean logically position vertices nicely.) The graphs I'm working with are all m-ary trees. M is usually no more than 5 or 6, but it can be greater in some cases. I do have something that I use now, Graphviz's node program, and it works perfectly. The problem is, when running a web app, I have to send a request to the server every time I want a layout. Preferably, I would like something written in Javascript that can be quickly run on the client side. All it needs to do is provide layout information (relative positioning and whatnot). I don't need it to draw to a canvas or use SVG or anything, all I'm interested in is the layout. Library use like jQuery or RaphaelJS is fine by me. I'll work with it. I'm just looking for something to speed things along a little. Also, I'd consider writing my own if I could find a nice description of an algorithm to do the layouts. But I really don't want to spend too much time. I have something that works now, so getting it on the client side is just a bonus, not a necessity.

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  • Simulate stochastic bipartite network based on trait values of species - in R

    - by Scott Chamberlain
    I would like to create bipartite networks in R. For example, if you have a data.frame of two types of species (that can only interact across species, not within species), and each species has a trait value (e.g., size of mouth in the predator allows who gets to eat which prey species), how do we simulate a network based on the traits of the species (that is, two species can only interact if their traits overlap in values for instance)? UPDATE: Here is a minimal example of what I am trying to do. 1) create phylogenetic tree; 2) simulate traits on the phylogeny; 3) create networks based on species trait values. # packages install.packages(c("ape","phytools")) library(ape); library(phytools) # Make phylogenetic trees tree_predator <- rcoal(10) tree_prey <- rcoal(10) # Simulate traits on each tree trait_predator <- fastBM(tree_predator) trait_prey <- fastBM(tree_prey) # Create network of predator and prey ## This is the part I can't do yet. I want to create bipartite networks, where ## predator and prey interact based on certain crriteria. For example, predator ## species A and prey species B only interact if their body size ratio is ## greater than X.

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  • php code works with mamp but not on ubuntu server

    - by user355510
    Hello, I have start looking at a twitter php library http://github.com/abraham/twitteroauth, but i can't get it to work on my ubuntu server, but on my mac, with mamp it works without any problems. This is the code that don't won't to work on my server, but in mamp. Yes i have edit config file <?php /* Start session and load library. */ session_start(); require_once('twitteroauth/twitteroauth.php'); require_once('config.php'); /* Build TwitterOAuth object with client credentials. */ $connection = new TwitterOAuth(CONSUMER_KEY, CONSUMER_SECRET); /* Get temporary credentials. */ $request_token = $connection->getRequestToken(OAUTH_CALLBACK); /* Save temporary credentials to session. */ $_SESSION['oauth_token'] = $token = $request_token['oauth_token']; $_SESSION['oauth_token_secret'] = $request_token['oauth_token_secret']; /* If last connection failed don't display authorization link. */ switch ($connection->http_code) { case 200: /* Build authorize URL and redirect user to Twitter. */ $url = $connection->getAuthorizeURL($token); header('Location: ' . $url); break; default: /* Show notification if something went wrong. */ echo 'Could not connect to Twitter. Refresh the page or try again later.'; } I have enable php session on my ubuntu server, because this code works <?php session_start(); $_SESSION["secretword"] = "hello there"; $secretword = $_SESSION["secretword"] ; ?> <html> <head> <title>A PHP Session Example</title> </head> <body> <?php echo $secretword; ?> </body> </html>

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  • ExecuteNonQuery: Connection property has not been initialized

    - by 20151012
    I get an error in my code: The error point at dbcom.ExecuteNonQuery();. Code(connection) public admin_addemp() { InitializeComponent(); con = new OleDbConnection(@"Provider=Microsoft.ACE.OLEDB.12.0;Data Source=|DataDirectory|\EMPS.accdb;Persist Security Info=True"); con.Open(); ds.Tables.Add(dt); ds.Tables.Add(dt2); } Code (Save button) private void save_btn_Click(object sender, EventArgs e) { OleDbCommand check = new OleDbCommand(); check.Connection = con; check.CommandText = "SELECT COUNT(*) FROM employeeDB WHERE ([EmployeeName]=?)"; check.Parameters.AddWithValue("@EmployeeName", tb_name.Text); if (Convert.ToInt32(check.ExecuteScalar()) == 0) { dbcom2 = new OleDbCommand("SELECT EmployeeID FROM employeeDB WHERE EmployeeID='" + tb_id.Text + "'", con); OleDbParameter param = new OleDbParameter(); param.ParameterName = tb_id.Text; dbcom.Parameters.Add(param); OleDbDataReader read = dbcom2.ExecuteReader(); if (read.HasRows) { MessageBox.Show("The Employee ID '" + tb_id.Text + "' already exist. Please choose another Employee ID."); read.Dispose(); read.Close(); } else { string q = "INSERT INTO employeeDB (EmployeeID, EmployeeName, IC, Address, State, " + " Postcode, DateHired, Phone, ManagerName) VALUES ('" + tb_id.Text + "', " + " '" + tb_name.Text + "', '" + tb_ic.Text + "', '" + tb_add1.Text + "', '" + cb_state.Text + "', " + " '" + tb_postcode.Text + "', '" + dateTimePicker1.Value + "', '" + tb_hp.Text + "', '" + cb_manager.Text + "')"; dbcom = new OleDbCommand(q, con); dbcom.ExecuteNonQuery(); MessageBox.Show("New Employee '" + tb_name.Text + "'- Successfuly Added."); } } else { MessageBox.Show("Employee name '" + tb_name.Text + "' already added into the database"); } ds.Dispose(); } I'm using Microsoft Access 2010 as my database and this is stand alone system. Please help me.

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  • JSF h:outputStylesheet doesn't work everywhere

    - by s3rius
    I'm currently learning Icefaces, now I'm trying to integrate a css file via h:OutputStylesheet into my code. I have a main page and a second page. Using outputStylesheet in my main page works well (and then I can also access the css in the second page, which I guess is intended). But when I try to integrate it in my second page it doesn't work at all. The code for both pages is basically identical. main page: <h:head></h:head> <h:body> <!-- this line works --> <h:outputStylesheet library="css" name="style.css" /> <!-- this line is only shown in red if the outputStylesheet from above is there --> <div class="red">This is red color in main page</div> </h:body> second page: <h:head></h:head> <h:body> <!-- this line doesn't work --> <h:outputStylesheet library="css" name="style.css" /> <!-- this line is only shown in red if the outputStylesheet in main page is there --> <div class="red">This is red color in second page</div> </h:body> I've made sure that I have h:body and h:head tags in both files. There's nothing more in the html pages except the standard doctype and xml version declarations. I've tried packing everything into h:forms, but that doesn't change anything. Can anyone explain to me what's going on?

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  • lapply slower than for-loop when used for a BiomaRt query. Is that expected?

    - by ptocquin
    I would like to query a database using BiomaRt package. I have loci and want to retrieve some related information, let say description. I first try to use lapply but was surprise by the time needed for the task to be performed. I thus tried a more basic for-loop and get a faster result. Is that expected or is something wrong with my code or with my understanding of apply ? I read other posts dealing with *apply vs for-loop performance (Here, for example) and I was aware that improved performance should not be expected but I don't understand why performance here is actually lower. Here is a reproducible example. 1) Loading the library and selecting the database : library("biomaRt") athaliana <- useMart("plants_mart_14") athaliana <- useDataset("athaliana_eg_gene",mart=athaliana) 2) Querying the database : loci <- c("at1g01300", "at1g01800", "at1g01900", "at1g02335", "at1g02790", "at1g03220", "at1g03230", "at1g04040", "at1g04110", "at1g05240" ) I create a function for the use in lapply : foo <- function(loci) { getBM("description","tair_locus",loci,athaliana) } When I use this function on the first element : > system.time(foo(cwp_loci[1])) utilisateur système écoulé 0.020 0.004 1.599 When I use lapply to retrieve the data for all values : > system.time(lapply(loci, foo)) utilisateur système écoulé 0.220 0.000 16.376 I then created a new function, adding a for-loop : foo2 <- function(loci) { for (i in loci) { getBM("description","tair_locus",loci[i],athaliana) } } Here is the result : > system.time(foo2(loci)) utilisateur système écoulé 0.204 0.004 10.919 Of course, this will be applied to a big list of loci, so the best performing option is needed. I thank you for assistance. EDIT Following recommendation of @MartinMorgan Simply passing the vector loci to getBM greatly improves the query efficiency. Simpler is better. > system.time(lapply(loci, foo)) utilisateur système écoulé 0.236 0.024 110.512 > system.time(foo2(loci)) utilisateur système écoulé 0.208 0.040 116.099 > system.time(foo(loci)) utilisateur système écoulé 0.028 0.000 6.193

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  • boost thread pool

    - by Dtag
    I need a threadpool for my application, and I'd like to rely on standard (C++11 or boost) stuff as much as possible. I realize there is an unofficial(!) boost thread pool class, which basically solves what I need, however I'd rather avoid it because it is not in the boost library itself -- why is it still not in the core library after so many years? In some posts on this page and elsewhere, people suggested using boost::asio to achieve a threadpool like behavior. At first sight, that looked like what I wanted to do, however I found out that all implementations I have seen have no means to join on the currently active tasks, which makes it useless for my application. To perform a join, they send stop signal to all the threads and subsequently join them. However, that completely nullifies the advantage of threadpools in my use case, because that makes new tasks require the creation of a new thread. What I want to do is: ThreadPool pool(4); for (...) { for (int i=0;i<something;i++) pool.pushTask(...); pool.join(); // do something with the results } Can anyone suggest a solution (except for using the existing unofficial thread pool on sourceforge)? Is there anything in C++11 or core boost that can help me here? Thanks a lot

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