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• Which programming language could I use for Natural Language Processing to extract clinical words?

  - by MACEE

  I am going to do entity extraction (like Named Entity Recognition) from clinical free text (unstructured raw text such as discharge summaries) and these entities could be any medical problem, medical tests or treatments. I am going to use one of i2b2 datasets (https://www.i2b2.org/) if case you are familiar with that. I am new to the NLP(Natural Language Processing) field and I need a programming language to support NLP tasks and also easily connect to the available libraries of machine learning algorithms like CRF. I don't know much java and I heard about Python, Perl and Scala but I am not sure which one would be the best option for this task?

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• Why is Android VM-based? [closed]

  - by adib

  By about 2004, it was clear that ARM is the clear winner for mobile CPUs, beating out MIPS, SH3, and DragonBall. PocketPC (Windows Mobile) applications was natively-compiled (at least most of them - except for .NET compact and its competitors). Likewise, Apple's iOS (named iPhone OS at the time) prefers natively-compiled applications. Then why Android chose a virtual machine based system stack? (the Dalvik VM). Wouldn't it be simpler to just compile applications down to ARM code using GCJ or something? Is the decision influenced by the J2ME-way of doing things, or was just because it's "cool"? Perhaps like most things Java, the culture that prefers multiple levels of indirection and abstractions, they just added another layer of abstraction for "just in case"?

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• Construct sentences from tabular data

  - by Sumeet

  I have a huge set of html files an have to retrieve the meaningful information from them. Most of the task is accomplished, now the problem is with HTML tables. I have some literature on how to extract meaningful tables from html, but my problem is with creating meaningful sentences from tabular data (or attribute value pairs extracted from a table). Are there any NLP/Machine learning techniques to do this? Here is what I expect. Suppose below is a sample table: col_Name: Sumeet col_year: 2011 col_winner: quiz Can this be made to something meaningful like "Sumeet won quiz in 2011"?

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• Is it possible to make the desktop background transparent or otherwise hidden?

  - by EndangeredMassa

  I'm running Ubuntu in a virtual machine via VirtualBox. I have the seamless mode turned on, which is pretty cool. However, if I move an Ubuntu window around quickly, I can see the redraw of the ubuntu background quickly before it's hidden by VirtualBox again. This isn't a huge deal, but I'd like to fix it, if possible. I see two possible options that don't involve changing VirtualBox code: 1. Make the Ubuntu desktop transparent 2. Make the Ubuntu desktop hidden entirely Is it possible to do either? I know that Compiz Fusion has/had a feature to do this for their cube effects, but I don't think that I can run this on the VM. And, even if I could, I don't want to run those services for this one small feature.

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• JavaScript malware analysis

  - by begueradj

  I want to test websites for JavaScript malware presence . I plan to develop a Python program that sends the URL of a given website to a virtual machine where the dynamic execution of the eventual malicious JavaScript embedded in the website's page is monitored. My questions: Should my VM be Windows or Linux ? What if the malware damages my VM: is there a hint how to avoid that ? Or launch a new VM automatically instead ? If I use telnet client library to communicate with the VM: must I implement a server within the VM to deal with my queries or can I overcome this ? I am jut looing for hints, general ideas. Thank you for any help.

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• Programming Language Family Tree?

  - by user134353

  As a man interested in programming, I must ask if there is a cataloged hierarchy of languages. I'd like to learn to actually understand what's happening- that is to say, I don't want to use a compiler until I understand what a compiler does and how to make my own. I really do want to start from total scratch. I'm told that means "machine code"? I don't know. What I do know is that "C++" is not the start. I'm not interested in learning that until I can actually break software down to its very base and see how the pieces go together.

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• How to implement a stack of game states in C++

  - by Lisandro Vaccaro

  I'm new to C++ and as a college proyect I'm building a 2D platformer with some classmates, I recently read that it's a good idea to have a stack of gamestates instead of a single global variable with the game state (which is what I have now) but I'm not sure how to do it. Currently this is my implementation: class GameState { public: virtual ~GameState(){}; virtual void handle_events() = 0; virtual void logic() = 0; virtual void render() = 0; }; class Menu : public GameState { public: Menu(); ~Menu(); void handle_events(); void logic(); void render(); }; Then I have a global variable of type GameState: GameState *currentState = NULL; And in my Main I define the currentState and call it's methods: int main(){ currentState = new Menu(); currentState.handle_events(); } How can I implement a stack or something similar to go from that to something like this: int main(){ statesStack.push(new Menu()); statesStack.getTop().handle_events(); }

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• Need theoretical help, how to comprehend an if-else dependency net

  - by macbie

  I am going to face a following issue: I'm writing a program that manages some properties, some of them are general and some are specific. Each property is a pair of key and value, and for example: if it is given a general property and other specific property with exactly the same key and value has been existed before then the general property will swap the specific one in the register. If there are two the same general properties - both will remain in the register. And so on; it is like a net of dependencies. In my case I can handle with it intuitively and foresee all cases, but only because the system is not too vast. What if it would? I have met such problems a few times in many different programs and languages (i.e working with C semaphores) and my question is: How to approach this kind of problem? Is this connected with finite state machine, graph theory or something similar? How to be sure that I have considered the whole system and each possible case? Could you recommend some resources (books, sites) to learn from?

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• How to manage Areas/Levels in an RPG?

  - by Hexlan

  I'm working on an RPG and I'm trying to figure out how to manage the different levels/areas in the game. Currently I create a new state (source file) for every area, defining its unique aspects. My concern is that as the game grows the number of class files will become unmanageable with all the towns, houses, shops, dungeons, etc. that I need to keep track of. I would also prefer to separate my levels from the source code because non-programmer members of the team will be creating levels, and I would like the engine to be as free from game specific code as possible. I'm thinking of creating a class that provides all the functions that will be the same between all the levels/areas with a unique member variable that can be used to look up level specifics from data. This way I only need to define level/area once in the code, but can create multiple instances each with its own unique aspects provided by data. Is this a good way to go about solving the issue? Is there a better way to handle a growing number of levels?

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• IIS8 Asp.net State service remote connection failure

  - by maxisam

  Recently we upgrade our web server to windows server 2012 with IIS8. We have this issue when users try to connect the asp.net state service to this web server remotely. It always popup Unable to make the session state request to the session state server. Please ensure that the ASP.NET State service is started and that the client and server ports are the same. If the server is on a remote machine, please ensure that it accepts remote requests by checking the value of HKEY_LOCAL_MACHINE\SYSTEM\CurrentControlSet\Services\aspnet_state\Parameters\AllowRemoteConnection. If the server is on the local machine, and if the before mentioned registry value does not exist or is set to 0, then the state server connection string must use either 'localhost' or '127.0.0.1' as the server name. In IIS7 / 7.5 we use the same way and it works fine. As long as the state service is running and firewall is set properly, we don't have any problem. However, in IIS8 it doesn't work. (We even turn off firewall to test it) Thanks for helping.

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• Testing Finite State Machines

  - by Pondidum

  I have inherited a large and firaly complex state machine at work. It has 31 possbile states to be in. It has the following inputs: Enum: Current State (so 0 - 30) Enum: source (currently only 2 entries) Boolean: Request Boolean: type Enum: Status (3 states) Enum: Handling (3 states) Boolean: Completed The 31 States are really needed (big business process). Breaking into seperate state machines doesnt seem feasable - each state is distinct. I have written tests for one set of inputs (the most common set), with one test per input (all inputs constant, except for the State input): [Subject("Application Process States")] public class When_state_is_meeting2Requested : AppProcessBase { Establish context = () => { //Setup.... }; Because of = () => process.Load(jas, vac); It Current_node_should_be_meeting2Requested = () => process.CurrentNode.ShouldBeOfType<meetingRequestedNode>(); It Can_move_to_clientDeclined = () => Check(process, process.clientDeclined); It Can_move_to_meeting1Arranged = () => Check(process, process.meeting1Arranged); It Can_move_to_meeting2Arranged = () => Check(process, process.meeting2Arranged); It Can_move_to_Reject = () => Check(process, process.Reject); It Cannot_move_to_any_other_state = () => AllOthersFalse(process); } As no one is entirely sure on what the output should be for each state and set of inputs i have been starting to write tests for it, however on calculation i will need to write 4320 ( 30*2*2*2*3*3*2 ) tests for it. Does anyone have any suggestions on how i should go about testing this?

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• jQuery form zip code to state function

  - by Dakota R.

  I'm trying to convert a preexisting javascript function into a jQuery function. The function comes from http://javascript.internet.com/forms/zip-to-state.html and aims to convert a user-entered zip code into a state. I'm using jQuery 1.3.2, with all the necessary plugins, but I'm not very familiar with jQuery syntax and how to convert this from plain ol' Javascript syntax. The setState function takes two parameters, the zip code element and the state element, so I'm trying to do something like this: $('$zip_code').change( function () { setState($(this), $('#state')); }); Any thoughts on this syntax? Thanks, Dakota function getState(zip) { if ((parseInt(zipString.substr(zip / 4, 1), 16) & Math.pow(2, zip % 4)) && (zip.length == 5)) for (var i = 0; i < stateRange.length; i += 7) if (zip <= 1 * stateRange.substr(i, 5)) return stateRange.substr(i + 5, 2); return null; } function setState(txtZip, optionBox) { if (txtZip.value.length != 5 || isNaN(txtZip.value / 4)) { optionBox.options[0].selected = true; alert("Please enter a 5 digit, numeric zip code."); return; } var state = getState(txtZip.value); for (var i = 0; i < optionBox.options.length; i++) if (optionBox.options[i].value == state) return optionBox.options[i].selected = true; for (var i = 0; i < optionBox.options.length; i++) if (optionBox.options[i].value == "XX") return optionBox.options[i].selected = true; }

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• Oracle Data Integration Solutions and the Oracle EXADATA Database Machine

  - by João Vilanova

  Oracle's data integration solutions provide a complete, open and integrated solution for building, deploying, and managing real-time data-centric architectures in operational and analytical environments. Fully integrated with and optimized for the Oracle Exadata Database Machine, Oracle's data integration solutions take data integration to the next level and delivers extremeperformance and scalability for all the enterprise data movement and transformation needs. Easy-to-use, open and standards-based Oracle's data integration solutions dramatically improve productivity, provide unparalleled efficiency, and lower the cost of ownership.You can watch a video about this subject, after clicking on the link below.DIS for EXADATA Video

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• Using ext4 in VMware machine

  First of all, using a journaling filesystems like NTFS, ext4, XFS, or JFS (not to name all of them) is a very good idea and nowadays unthinkable not to do. Linux offers a good variety of different option as journaling filesystem for your system. Since years I am using SGI's XFS and I am pretty confident with stability, performance and liability of the system. In earlier years I had to struggle with incompatibilities between XFS and the boot loader. Using an ext2 formatted /boot solved this issue. But, wow, that is ages ago! Lately, I had to setup a fresh Lucid Lynx (Ubuntu 10.04 LTS) system for a change of our internal groupware / messaging system. Therefore, I fired up a new virtual machine with almost standard configuration in VMware Server and run through our network-based PXE boot and installation procedure. At a certain step in this process, Ubuntu asks you about the partitioning of your hard drive(s). Honestly, I have to say that only out of curiousity I sticked to the "default" suggestion and gave my faith and trust into the Ubuntu installation routine... Resulting to have an ext4 based root mount point ( / ). The rest of the installation went on without further concerns or worries. Note:I really can't remember why I chose to go away from my favourite... Well, it should turn out to be the wrong decision after all. Ok, let's continue the story about ext4 in a VMware based virtual machine. After some hours installing additional packages and configuring the new system using LDAP for general authentication and login, I had an "out-of-the-box" usable enterprise messaging system based on Zarafa 6.40 Community Edition inclusive proper SSL-based Webaccess interface and Z-Push extension for ActiveSync with my Nokia mobile. Straightforward and pretty nice for the time spent on the setup. Having priority on other tasks I let the system just running and didn't pay any further attention at all. Until I run into an upgrade of "Mail for Exchange" on Symbian OS. My mobile did not bother me at all with the upgrade and everything went smooth, but trying to re-establish the ActiveSync connection to the Zarafa messaging system resulted in a frustating situation. So, I shifted my focus back to the Linux system and I was amazed to figure out that the root had been remounted readonly due to hard drive failures or at least ext4 reported errors. Firing up Google only confirmed my concerns and it seems that using ext4 for VMware based virtual machines does not look like a stable and reliable candidate to me. You might consider reading those external resources: ext4 fs corruption under VMWare Server 2.01Bug #389555 - ext4 filesystem corruption Well, I learned my lesson and ext{2|3|4} based filesystems are not going to be used on any of my Linux systems or customer installations in the future. Addendum: I did not try this setup in other virtualization environments like VirtualBox, qemu, kvm, Xen, etc.

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• Virtual Machine Storage Provisioning and best practises

  If you're using Virtualization technology, then at some point you'll have run out of (or will run out of) virtual disk space, & had to provision extra storage; are you confident that you know how to do that? Sean Duffy makes sure you're doing it right, sharing his recommendations and tips in this step-by-step guide to Virtual Machine Storage provisioning for VMware. Follow this advice, and you'll be a Virtualization Veteran in no time.

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• Copywriting and SEO - How to Please Man & Machine!

  To be an effective web content writer, you need to understand that your web content has two entities to please. Man (Audience) and Machine (Search Engines).

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• Best way to remote restart Ubuntu from Windows machine

  - by robsoft

  Background: I'm looking to put a series of Ubuntu machines into retail locations, they're being used as dumb kiosks to show a series of slides onto large LCD panel TV screens. Once installed, they won't have a keyboard or mouse connected but will have a fixed IP on the local network. Everything is configured to auto-start, no automatic updates, no power saving etc - I think we're pretty-much good to go apart from one thing. I need the retail staff to be able to restart the boxes if a problem arises. We have VNC running (now that we've turned off desktop enhancements!) so that we can remotely get into the machines if we need to, but that's not something we would allow the retail staff to do. The machines are going to be physically 'out of the way' (probably in the ceiling space) so the power button is not easily accessible!. I'd like to have some means of allowing the retail staff to restart the Ubuntu machine, from the desktop of one of their Windows terminals. I don't really want to give them some kind of raw terminal access (the command line will frighten them!) and I don't want them to use VNC (as stated above). Ideally there would be an icon on the Windows desktop, they double-click it, reply to a simple 'are you sure?' prompt, and then the Ubuntu box is told to restart. The Windows side of that won't be a problem, we can write something using Delphi, Python & Qt4, whatever - it's the Ubuntu side of it I'm stuck with. Out of sight/view, could I have a Windows program open a terminal across the network and tell Ubuntu to restart? Is this what SSH could be used for (I have never set that kind of thing up). The Windows programming side isn't really an issue, it's just that I'm a total Ubuntu noob and don't know where to start from the platform point of view. The other thing we considered is also having the machine automatically restart itself at a set time each day (obviously out of store hours!). To me, that seems a bit unnecessary (though forcing a restart once a week/month might be worthwhile). Any thoughts or suggestions? Being able to restart the box on demand across the network is my prime requirement.

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• Duplicate ping response when running Ubuntu as virtual machine (VMWare)

  - by Stonerain

  I have the following setup: My router - 192.168.0.1 My host computer (Windows 7) - 192.168.0.3 And Ubuntu is running as virtual machine on the host. VMWare network settings is Bridged mode. I've modified Ubuntu network settings in /etc/netowrk/interfaces, set the following config: iface eth0 inet static address 192.168.0.220 netmask 255.255.255.0 network 192.168.0.0 broadcast 192.168.0.255 gateway 192.168.0.1 Internet works correctly, I can install packages. But it gets weird if I try to ping something I get this: PING belpak.by (193.232.248.80) 56(84) bytes of data. From 192.168.0.1 icmp_seq=1 Time to live exceeded From 192.168.0.1 icmp_seq=1 Time to live exceeded From 192.168.0.1 icmp_seq=1 Time to live exceeded From 192.168.0.1 icmp_seq=1 Time to live exceeded From 192.168.0.1 icmp_seq=1 Time to live exceeded 64 bytes from belhost.by (193.232.248.80): icmp_seq=1 ttl=250 time=17.0 ms 64 bytes from belhost.by (193.232.248.80): icmp_seq=1 ttl=249 time=17.0 ms (DUP! ) 64 bytes from belhost.by (193.232.248.80): icmp_seq=1 ttl=248 time=17.0 ms (DUP! ) 64 bytes from belhost.by (193.232.248.80): icmp_seq=1 ttl=247 time=17.0 ms (DUP! ) 64 bytes from belhost.by (193.232.248.80): icmp_seq=1 ttl=246 time=17.0 ms (DUP! ) ^CFrom 192.168.0.1 icmp_seq=2 Time to live exceeded --- belpak.by ping statistics --- 2 packets transmitted, 1 received, +4 duplicates, +6 errors, 50% packet loss, ti me 999ms rtt min/avg/max/mdev = 17.023/17.041/17.048/0.117 ms I think even more interesting are the results of pinging the router itself: stonerain@ubuntu:~$ ping 192.168.0.1 -c 1 PING 192.168.0.1 (192.168.0.1) 56(84) bytes of data. From 192.168.0.3: icmp_seq=1 Redirect Network(New nexthop: 192.168.0.1) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=254 time=6.64 ms --- 192.168.0.1 ping statistics --- 1 packets transmitted, 1 received, 0% packet loss, time 0ms rtt min/avg/max/mdev = 6.644/6.644/6.644/0.000 ms But if I set -c 2: ... 64 bytes from 192.168.0.1: icmp_seq=1 ttl=252 time=13.5 ms (DUP!) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=251 time=13.5 ms (DUP!) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=254 time=13.5 ms (DUP!) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=253 time=13.5 ms (DUP!) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=252 time=13.5 ms (DUP!) 64 bytes from 192.168.0.1: icmp_seq=1 ttl=251 time=13.5 ms (DUP!) From 192.168.0.3: icmp_seq=2 Redirect Network(New nexthop: 192.168.0.1) 64 bytes from 192.168.0.1: icmp_seq=2 ttl=254 time=7.87 ms --- 192.168.0.1 ping statistics --- 2 packets transmitted, 2 received, +256 duplicates, 0% packet loss, time 1002ms rtt min/avg/max/mdev = 6.666/10.141/13.556/2.410 ms Pinging host machine on the other hand works absolutely correctly: no DUPs, no errors. What seems to be the problem and how can I fix it? Thank you.

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• Remote Desktop from a ubuntu 13.04 to an Ubuntu 13.04 machine so the user on the second machine can see my movments

  - by user163169

  I would like to remote desktop/VPN from an Ubuntu 13.04 computer (a) to an Ubuntu 13.04 computer(b) so the user(s) on the second machine can see my movements. I would like something a lot like team-viewer or Join.me but these machines do not have Internet but that are attached on a local network and I can VPN to them but that can not see what I am doing and I need them to be able to see my movements.

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• Windows Server 2008 System State Backup

  - by MJ

  What I'm looking for, is info on what is contained in the server 2008 system state backup. It is incredibly large (10+ G), and annoying to backup remotely. is there a way to take a full system state, and then do like a weekly incremental? I know the wbadmin tool, but its options are limited. I'm also looking for the option to remove the 2nd or 3rd oldest backup.

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• How to transfer Windows Vista disk image to new machine

  - by Mike Hobbs

  I'm trying to upgrade a user's machine to some better hardware. I know of Easy Transfer, but I'd rather not have to reinstall all the programs that are already present. (Some of which are no longer available, anyway). Instead, I'm trying to transfer the entire disk image from one machine to the other, but I ran into issues. If I copy the partition image over to the new machine using Clonezilla, I get errors on boot saying that I need to insert the Vista install disk and run repair. I do that, but it then says that it is unable to repair whatever it is that's broken. Next, I tried to sysprep the old machine before creating the image, but sysprep fails saying that it encountered some sort of system error. Should it be possible to sysprep any arbitrary machine, or does it only work on a relatively clean install? Could it be a missing driver that is tripping me up? The new machine is a fairly stock desktop that shouldn't need any special drivers beyond what's already present in standard Vista. Are there any foolproof methods for doing this sort of thing?

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• how to back up data from a machine that keeps hanging

  - by Amit Phatarphekar

  Hello - I have a storage server running opensolaris. But lately its been acting up - it hangs at random times due to some SCSI/ATA related error messages. I've tried to fix it without any progress, so I'm giving up now. The machine keeps hanging every 30 minutes or 1 hr ...sometimes after 4 hrs. Its very unpredictable. So I've decided to just reformat the storage server and start from scratch...maybe I'll just not use solaris and install something else, since the errors are related to solaris running on ATA HDD or something. Question - Before I reformat it, I want to back up some of the important data on it. Like it has a VM with 200 GB disk files, it has a whole bunch of ISOs stored on it etc etc. I'm using a simple scp to copy the files over to a different machine. My issue is that, because the machine hangs....sometimes my file copy is incomplete and I have to start all over again. Lets say I'm trying to copy a 200GB file which takes like 4 hrs....IF the machine hangs before the whole file i copied over...I have to recopy the file from scratch. Is there a solution to copy the files over such that if the machine hangs or network goes down..the copying can resume from where it left off? - like if 50 GB of a 200GB file was copied and machine hung....next time, it'll just continue to copy rest of the amount, instead of starting all over again. Thanks Amit

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• Routing protocols, distance vector vs link state

  - by Artem Barger

  I'm trying to figure out the differences(pros/cons) between two routing protocols approach and I would be great-full for any help, advice and explanation. As far I can say that it seems like distance vector is more static and more local based routing, since it doesn't know the network state whereas link state is more aware of current states therefore it seems more natural to use it over distance-vector, but I have a feeling like I'm missing something. And I would be glad to here about more aspects and different issues I have to consider while choosing one of them.

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• Running docker in VPC and accessing container from another VPC machine

  - by Bogdan Gaza

  I'm having issues while running docker in AWS VPC. Here is my setup: I've got two machines running in VPC: 10.0.100.150 10.0.100.151 both having an elastic IPs assigned to them, both running in the same internet enabled subnet. Let's say I'm running a web server that serves static files in a container on the 10.0.100.150 machine the container: IP: 172.17.0.2 port 8111 is forwarded on the 8111 port on the machine. I'm trying to access the static files from my local machine (or another non-VPC machine also tried an EC2 instance not running in the VPC) and it work flawlessly. If I try to access the files from the other machine (10.0.100.151) it hangs. I'm using wget to pull the files. Tried to debug it with tcpdump and ngrep and that I have seen is that the request reaches the container. If I ngrep on the host machine I see the requests going in but no response going back. If I ngrep on the container I see the requests going in and the response going back. I've tried multiple iptables setups (with postrouting enabled, with manually forwarding ports etc) but no success. Help in any way - even debugging directions would be much appreciated. Thanks!

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• Duplication of Architecture State means physically extra?

  - by Doopy Doo

  Hyper-Threading Technology makes a single physical processor appear as two logical processors; the physical execution resources are shared and the architecture state is duplicated for the two logical processors. So, this means that there are two sets of basic registers such as Next Instruction Pointer, processor registers like AX, BX, CX etc physically embedded in the micro-processor chip, OR they(arch. state) are made to look two sets by some low level duplication by software/OS.

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