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• Linux software raid robustness

  - by Waxhead

  I have a 4 disk 5TB raid5 setup where a disk is showing signs of going down the drain. It is reporting media errors and from dmesg I can see that several read errors are corrected. smartctl does report "notifications" but no panic so far. Since new disks are rather expensive at the moment I am starting to pondering exactly how robust the linux md layer is. I would appreciate if someone could shed some light on how md actually deals with disk errors. For example how does md deal with write and read errors - what does it (really) take for disk to be rejected from an array. I also read that recently md got support for mapping out bad blocks. Does this mean that the read errors I've had would have been mapped out if I where running kernel 3.1 or would md still try to "work on them" to make them usable.

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• Part 4: Development Standards or How to share

  - by volker.eckardt(at)oracle.com

  Although we usually introduce the custom development part in EBS projects as “a small piece only” and “we will avoid as best as possible”, the development effort can be enormous and should therefore be well addressed by project standards. Any additional solution or additional software tool or product shall influence the custom development rules (by adding, removing or replacing sections). It is very common in EBS projects to create a so called “MD.030 Development Standards” document and put everything what’s related to development conventions into it. This document gets approval and will be shared among all developers. Later, additional sections have to be added, and usually the development lead is responsible for doing this. However, sometimes used development techniques are not documented properly, and therefore the development solutions deviate from each other, or from the initially agreed standards. My advice would be the following: keep the MD.030 as a base document, and add a Wiki on top. The “Development Wiki” covers the following: Collect input from every developer without updating the MD.030 directly Collect additional topics that might need further specification Allow a discussion about such topics by reviewing/updating the wiki directly Add also decisions or open questions right into it. In one of my own projects we were using this “Developer Wiki” quite extensive, and my experience is very positive. We had different sections in it, good cross references, but also additional material like code templates, links to external web pages etc. By using this wiki, the development standards became “owned” by the right group of people, the developers. They recognized that information sharing can improve the overall development quality, but will also reduce the workload on individuals. Finally, the wiki was much more accurate and helpful for the daily development work than our initial MD.030, and we all decided to retire the document completely. Summary: Information sharing in the development area is very important! The usual “MD.030 Development Standards“ is a good starting point, but should be combined with a “Development Wiki”, allowing everyone to address and discuss necessary improvements. A well-structured Wiki can replace the document in some sections completely. Side Note: The corresponding task in Oracle OUM (Oracle Unified Method) is DS.050 ‘Determine Design and Build Standards’ Volker

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• RAID1: can't replace faulty spare (marked again as 'faulty spare' within seconds)

  - by user212475

  I got a problem that I cannot solve: Our fileserver runs XUbuntu and 3 RAID1s. One has a problem since monday: it consists of sdb and sdc. sdb was marked as faulty by mdadm for unknown reasons. I used --remove to remove it from the RAID and then to add it by --add. All was fine, re-syncing started but never got above 0% and after a few seconds, sdb was again marked as 'faulty spare' (and therefore the RAID degraded, but clean). So I saved the first 512 byte of the old sdb to a file, bought a new HDD of same size (4TB), shut down the computer and replaced sdb physically, switched the computer back on and wrote the 512 byte back to the new drive to have the same partition info as the old drive (both are the same type, from same company). But the new drive shows the same behaviour as the old: I can add, re-syncing starts and after a few seconds its marked as 'faulty spare'. Here exactly what i did: mdadm --remove /dev/md/1 /dev/sdb maadm --detail /dev/md/1 gives me: /dev/md/1: Version : 1.2 Creation Time : Sat Jun 8 22:32:05 2013 Raid Level : raid1 Array Size : 3906887360 (3725.90 GiB 4000.65 GB) Used Dev Size : 3906887360 (3725.90 GiB 4000.65 GB) Raid Devices : 2 Total Devices : 1 Persistence : Superblock is persistent Update Time : Thu Nov 7 06:56:13 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 0 Spare Devices : 0 Name : File-Server:1 (local to host File-Server) UUID : 44ed561f:b733e946:e69820f4:aba9b223 Events : 2424 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 32 1 active sync /dev/sdc mdadm --add /dev/md/1 /dev/sdb mdadm --detail /dev/md/1 gives me: Version : 1.2 Creation Time : Sat Jun 8 22:32:05 2013 Raid Level : raid1 Array Size : 3906887360 (3725.90 GiB 4000.65 GB) Used Dev Size : 3906887360 (3725.90 GiB 4000.65 GB) Raid Devices : 2 Total Devices : 2 Persistence : Superblock is persistent Update Time : Thu Nov 7 06:57:49 2013 State : clean, degraded, recovering Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 Rebuild Status : 0% complete Name : File-Server:1 (local to host File-Server) UUID : 44ed561f:b733e946:e69820f4:aba9b223 Events : 2431 Number Major Minor RaidDevice State 2 8 16 0 faulty spare rebuilding /dev/sdb 1 8 32 1 active sync /dev/sdc and after a few seconds: /dev/md/1: Version : 1.2 Creation Time : Sat Jun 8 22:32:05 2013 Raid Level : raid1 Array Size : 3906887360 (3725.90 GiB 4000.65 GB) Used Dev Size : 3906887360 (3725.90 GiB 4000.65 GB) Raid Devices : 2 Total Devices : 2 Persistence : Superblock is persistent Update Time : Thu Nov 7 06:57:50 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 Name : File-Server:1 (local to host File-Server) UUID : 44ed561f:b733e946:e69820f4:aba9b223 Events : 2436 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 32 1 active sync /dev/sdc 2 8 16 - faulty spare /dev/sdb same behaviour if I zero the superblock (mdadm --zero-superblock /dev/sdb) before adding sdb. I do all commands as root and the system holds 3 more 4TB drives, ie the mainboard can handle them. The old harddrive was checked for errors using badblocks, but all is fine. Does anybody have any idea, what the problem is?

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• Exception when creating MailMessage

  - by Julien Poulin

  I'm getting a FormatException telling me the address '[email protected]' is invalid (I'm guessing because of the '-'). Here is the code I'm using: var md = new MailDefinition(); md.BodyFileName = physicalPath; md.Subject = subject; md.From = from; md.CC = cc; md.IsBodyHtml = true; MailMessage mailMessage = md.CreateMailMessage(to, replacements, owner); Is there a bug in the .Net e-mail parser? I am sure this address is valid since it belongs to a friend and I have no problem sending and receiving his e-mails with Outlook. Is there a way to fix this? EDIT: Here is the stacktrace: [FormatException: La chaîne spécifiée n'est pas de la forme requise pour une adresse de messagerie.] System.Net.Mime.MailBnfHelper.ReadMailAddress(String data, Int32& offset, String& displayName) +1141755 System.Net.Mail.MailAddress.ParseValue(String address) +240 System.Net.Mail.MailAddress..ctor(String address, String displayName, Encoding displayNameEncoding) +85 System.Net.Mail.Message..ctor(String from, String to) +122 System.Net.Mail.MailMessage..ctor(String from, String to) +114 System.Web.UI.WebControls.MailDefinition.CreateMailMessage(String recipients, IDictionary replacements, String body, Control owner) +1366 System.Web.UI.WebControls.MailDefinition.CreateMailMessage(String recipients, IDictionary replacements, Control owner) +290 WebNotificationManager.CreateMessage(Page owner, MessageTemplate messageTemplate, ListDictionary replacements, String to, String from, String cc, String subject) in c:\dev\SoccerMania\SoccerMania\App_Code\WebNotificationManager.cs:41 WebNotificationManager.SendMessage(Page owner, MessageTemplate messageTemplate, ListDictionary replacements, String to, String subject) in c:\dev\SoccerMania\SoccerMania\App_Code\WebNotificationManager.cs:22 inscription.bInscription_Click(Object sender, EventArgs e) in c:\dev\SoccerMania\SoccerMania\Inscription.aspx.cs:54 System.Web.UI.WebControls.LinkButton.OnClick(EventArgs e) +111 System.Web.UI.WebControls.LinkButton.RaisePostBackEvent(String eventArgument) +79 System.Web.UI.WebControls.LinkButton.System.Web.UI.IPostBackEventHandler.RaisePostBackEvent(String eventArgument) +10 System.Web.UI.Page.RaisePostBackEvent(IPostBackEventHandler sourceControl, String eventArgument) +13 System.Web.UI.Page.RaisePostBackEvent(NameValueCollection postData) +175 System.Web.UI.Page.ProcessRequestMain(Boolean includeStagesBeforeAsyncPoint, Boolean includeStagesAfterAsyncPoint) +1565

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• Collision Attacks, Message Digests and a Possible solution

  - by Dominar

  I've been doing some preliminary research in the area of message digests. Specifically collision attacks of cryptographic hash functions such as MD5 and SHA-1, such as the Postscript example and X.509 certificate duplicate. From what I can tell in the case of the postscript attack, specific data was generated and embedded within the header of the postscript (which is ignored during rendering) which brought about the internal state of the md5 to a state such that the modified wording of the document would lead to a final MD equivalent to the original. The X.509 took a similar approach where by data was injected within the comment/whitespace of the certificate. Ok so here is my question, and I can't seem to find anyone asking this question: Why isn't the length of ONLY the data being consumed added as a final block to the MD calculation? In the case of X.509 - Why is the whitespace and comments being taken into account as part of the MD? Wouldn't a simple processes such as one of the following be enough to resolve the proposed collision attacks: MD(M + |M|) = xyz MD(M + |M| + |M| * magicseed_0 +...+ |M| * magicseed_n) = xyz where : M : is the message |M| : size of the message MD : is the message digest function (eg: md5, sha, whirlpool etc) xyz : is the acutal message digest value for the message M magicseed_{i}: Is a set random values generated with seed based on the internal-state prior to the size being added. This technqiue should work, as to date all such collision attacks rely on adding more data to the original message. In short, the level of difficulty involved in generating a collision message such that: It not only generates the same MD But is also comprehensible/parsible/compliant and is also the same size as the original message, is immensely difficult if not near impossible. Has this approach ever been discussed? Any links to papers etc would be nice.

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• MixItUp Pagination not working

  - by pwnjack

  I'm using MixItUp in my project to have an homepage with my items, and I want a pagination, i saw that the plugin actually supports pagination but I couldn't make it work. Here is my attempt: Markup: <div id="main"> <div class="container" id="Container"> <div class="row"> <div class="col-md-3 mix clip"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Videoclip</p> </div> </div> </div> <div class="col-md-3 mix adv"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Advertising</p> </div> </div> </div> <div class="col-md-3 mix reportage"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Reportage</p> </div> </div> </div> <div class="col-md-3 mix clip"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Videoclip</p> </div> </div> </div> <div class="col-md-3 mix adv"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Advertising</p> </div> </div> </div> <div class="col-md-3 mix reportage"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Reportage</p> </div> </div> </div> <div class="col-md-3 mix clip"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Videoclip</p> </div> </div> </div> <div class="col-md-3 mix adv"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Advertising</p> </div> </div> </div> <div class="col-md-3 mix reportage"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Videoclip</p> </div> </div> </div> <div class="col-md-3 mix clip"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Videoclip</p> </div> </div> </div> <div class="col-md-3 mix adv"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Advertising</p> </div> </div> </div> <div class="col-md-3 mix reportage"> <div class="item"> <img src="http://placehold.it/300x200" class="img-responsive" alt=""> <div class="caption"> <h1>Title</h1> <p>Reportage</p> </div> </div> </div> </div> <!-- end row --> </div> <!-- end container --> </div> <!-- end main --> As you can see the plugin is working fine with filters, but the pagination is not even showing. In the plugin's documentation there's a section dedicated to pagination, although the demo example is not there, so i can't use it as a starting working point. You can take a look at the documentation here: https://mixitup.kunkalabs.com/extensions/pagination I followed the instructions and used this JS code: $('#Container').mixItUp({ pagination: { generatePagers: true, prevButtonHTML: '«', nextButtonHTML: '»' } }); I put in the markup the emtpy div as stated in the docs: <div class="pager-list"> <!-- Pagination buttons will be generated here --> </div> Nothing happens. Can someone point me in the right direction, I don't know how to go on solving this problem, the plugin seems to support pagination, so I'm hoping to achieve that. Thanks, any suggestion is much appreciated.

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• Python: Pass parameter one time, but use more times

  - by Gabriel L. Oliveira

  I'm trying to do this: commands = { 'py': 'python %s', 'md': 'markdown "%s" "%s.html"; gnome-open "%s.html"', } commands['md'] % 'file.md' But like you see, the commmands['md'] uses the parameter 3 times, but the commands['py'] just use once. How can I repeat the parameter without changing the last line (so, just passing the parameter one time?)

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• Pass parameter one time, but use more times

  - by Gabriel L. Oliveira

  I'm trying to do this: commands = { 'py': 'python %s', 'md': 'markdown "%s" "%s.html"; gnome-open "%s.html"', } commands['md'] % 'file.md' But like you see, the commmands['md'] uses the parameter 3 times, but the commands['py'] just use once. How can I repeat the parameter without changing the last line (so, just passing the parameter one time?)

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• Java MessageDigest result does not stay constant

  - by user344146

  I've got this function for encrypting passwords in Java, but somehow when I call MessageDigest, it returns a different result every time even though I call it with the same password. I wonder if I am initializing it wrong somehow. public String encrypt (String password) { MessageDigest md = MessageDigest.getInstance("SHA-1"); md.reset(); md.update(password.getBytes(Charset.forName("utf-8")),0,password.length()); String res = md.digest().toString(); }

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• Visual Studio 2013, ASP.NET MVC 5 Scaffolded Controls, and Bootstrap

  - by plitwin

  A few days ago, I created an ASP.NET MVC 5 project in the brand new Visual Studio 2013. I added some model classes and then proceeded to scaffold a controller class and views using the Entity Framework. Scaffolding Some Views Visual Studio 2013, by default, uses the Bootstrap 3 responsive CSS framework. Great; after all, we all want our web sites to be responsive and work well on mobile devices. Here’s an example of a scaffolded Create view as shown in Google Chrome browser   Looks pretty good. Okay, so let’s increase the width of the Title, Description, Address, and Date/Time textboxes. And decrease the width of the  State and MaxActors textbox controls. Can’t be that hard… Digging Into the Code Let’s take a look at the scaffolded Create.cshtml file. Here’s a snippet of code behind the Create view. Pretty simple stuff. @using (Html.BeginForm()) { @Html.AntiForgeryToken() <div class="form-horizontal"> <h4>RandomAct</h4> <hr /> @Html.ValidationSummary(true) <div class="form-group"> @Html.LabelFor(model => model.Title, new { @class = "control-label col-md-2" }) <div class="col-md-10"> @Html.EditorFor(model => model.Title) @Html.ValidationMessageFor(model => model.Title) </div> </div> <div class="form-group"> @Html.LabelFor(model => model.Description, new { @class = "control-label col-md-2" }) <div class="col-md-10"> @Html.EditorFor(model => model.Description) @Html.ValidationMessageFor(model => model.Description) </div> </div> .csharpcode, .csharpcode pre { font-size: small; color: black; font-family: consolas, "Courier New", courier, monospace; background-color: #ffffff; /*white-space: pre;*/ } .csharpcode pre { margin: 0em; } .csharpcode .rem { color: #008000; } .csharpcode .kwrd { color: #0000ff; } .csharpcode .str { color: #006080; } .csharpcode .op { color: #0000c0; } .csharpcode .preproc { color: #cc6633; } .csharpcode .asp { background-color: #ffff00; } .csharpcode .html { color: #800000; } .csharpcode .attr { color: #ff0000; } .csharpcode .alt { background-color: #f4f4f4; width: 100%; margin: 0em; } .csharpcode .lnum { color: #606060; } A little more digging and I discover that there are three CSS files of importance in how the page is rendered: boostrap.css (and its minimized cohort) and site.css as shown below.   The Root of the Problem And here’s the root of the problem which you’ll find the following CSS in Site.css: /* Set width on the form input elements since they're 100% wide by default */ input, select, textarea { max-width: 280px; } .csharpcode, .csharpcode pre { font-size: small; color: black; font-family: consolas, "Courier New", courier, monospace; background-color: #ffffff; /*white-space: pre;*/ } .csharpcode pre { margin: 0em; } .csharpcode .rem { color: #008000; } .csharpcode .kwrd { color: #0000ff; } .csharpcode .str { color: #006080; } .csharpcode .op { color: #0000c0; } .csharpcode .preproc { color: #cc6633; } .csharpcode .asp { background-color: #ffff00; } .csharpcode .html { color: #800000; } .csharpcode .attr { color: #ff0000; } .csharpcode .alt { background-color: #f4f4f4; width: 100%; margin: 0em; } .csharpcode .lnum { color: #606060; } Yes, Microsoft is for some reason setting the maximum width of all input, select, and textarea controls to 280 pixels. Not sure the motivation behind this, but until you change this or overrride this by assigning the form controls to some other CSS class, your controls will never be able to be wider than 280px. The Fix Okay, so here’s the deal: I hope to become very competent in all things Bootstrap in the near future, but I don’t think you should have to become a Bootstrap guru in order to modify some scaffolded control widths. And you don’t. Here is the solution I came up with: Find the aforementioned CSS code in SIte.css and change it to something more tenable. Such as: /* Set width on the form input elements since they're 100% wide by default */ input, select, textarea { max-width: 600px; } Because the @Html.EditorFor html helper doesn’t support the passing of HTML attributes, you will need to repalce any @Html.EditorFor() helpers with @Html.TextboxFor(), @Html.TextAreaFor, @Html.CheckBoxFor, etc. helpers, and then add a custom width attribute to each control you wish to modify. Thus, the earlier stretch of code might end up looking like this: @using (Html.BeginForm()) { @Html.AntiForgeryToken() <div class="form-horizontal"> <h4>Random Act</h4> <hr /> @Html.ValidationSummary(true) <div class="form-group"> @Html.LabelFor(model => model.Title, new { @class = "control-label col-md-2" }) <div class="col-md-10"> @Html.TextBoxFor(model => model.Title, new { style = "width: 400px" }) @Html.ValidationMessageFor(model => model.Title) </div> </div> <div class="form-group"> @Html.LabelFor(model => model.Description, new { @class = "control-label col-md-2" }) <div class="col-md-10"> @Html.TextAreaFor(model => model.Description, new { style = "width: 400px" }) @Html.ValidationMessageFor(model => model.Description) </div> </div> .csharpcode, .csharpcode pre { font-size: small; color: black; font-family: consolas, "Courier New", courier, monospace; background-color: #ffffff; /*white-space: pre;*/ } .csharpcode pre { margin: 0em; } .csharpcode .rem { color: #008000; } .csharpcode .kwrd { color: #0000ff; } .csharpcode .str { color: #006080; } .csharpcode .op { color: #0000c0; } .csharpcode .preproc { color: #cc6633; } .csharpcode .asp { background-color: #ffff00; } .csharpcode .html { color: #800000; } .csharpcode .attr { color: #ff0000; } .csharpcode .alt { background-color: #f4f4f4; width: 100%; margin: 0em; } .csharpcode .lnum { color: #606060; } Resulting Form Here’s what the page looks like after the fix: Technorati Tags: ASP.NET MVC,ASP.NET MVC 5,Bootstrap

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• apt-get update mdadm scary warnings

  - by user568829

  Just ran an apt-get update on one of my dedicated servers to be left with a relatively scary warning: Processing triggers for initramfs-tools ... update-initramfs: Generating /boot/initrd.img-2.6.26-2-686-bigmem W: mdadm: the array /dev/md/1 with UUID c622dd79:496607cf:c230666b:5103eba0 W: mdadm: is currently active, but it is not listed in mdadm.conf. if W: mdadm: it is needed for boot, then YOUR SYSTEM IS NOW UNBOOTABLE! W: mdadm: please inspect the output of /usr/share/mdadm/mkconf, compare W: mdadm: it to /etc/mdadm/mdadm.conf, and make the necessary changes. W: mdadm: the array /dev/md/2 with UUID 24120323:8c54087c:c230666b:5103eba0 W: mdadm: is currently active, but it is not listed in mdadm.conf. if W: mdadm: it is needed for boot, then YOUR SYSTEM IS NOW UNBOOTABLE! W: mdadm: please inspect the output of /usr/share/mdadm/mkconf, compare W: mdadm: it to /etc/mdadm/mdadm.conf, and make the necessary changes. W: mdadm: the array /dev/md/6 with UUID eef74de5:9267b2a1:c230666b:5103eba0 W: mdadm: is currently active, but it is not listed in mdadm.conf. if W: mdadm: it is needed for boot, then YOUR SYSTEM IS NOW UNBOOTABLE! W: mdadm: please inspect the output of /usr/share/mdadm/mkconf, compare W: mdadm: it to /etc/mdadm/mdadm.conf, and make the necessary changes. W: mdadm: the array /dev/md/5 with UUID 5d45b20c:04d8138f:c230666b:5103eba0 W: mdadm: is currently active, but it is not listed in mdadm.conf. if W: mdadm: it is needed for boot, then YOUR SYSTEM IS NOW UNBOOTABLE! W: mdadm: please inspect the output of /usr/share/mdadm/mkconf, compare W: mdadm: it to /etc/mdadm/mdadm.conf, and make the necessary changes. As instructed I inspected the output of /usr/share/mdadm/mkconf and compared with /etc/mdadm/mdadm.conf and they are quite different. Here is the /etc/mdadm/mdadm.conf contents: # mdadm.conf # # Please refer to mdadm.conf(5) for information about this file. # # by default, scan all partitions (/proc/partitions) for MD superblocks. # alternatively, specify devices to scan, using wildcards if desired. DEVICE partitions # auto-create devices with Debian standard permissions CREATE owner=root group=disk mode=0660 auto=yes # automatically tag new arrays as belonging to the local system HOMEHOST <system> # instruct the monitoring daemon where to send mail alerts MAILADDR root # definitions of existing MD arrays ARRAY /dev/md0 level=raid1 num-devices=2 UUID=b93b0b87:5f7c2c46:0043fca9:4026c400 ARRAY /dev/md1 level=raid1 num-devices=2 UUID=c0fa8842:e214fb1a:fad8a3a2:28f2aabc ARRAY /dev/md2 level=raid1 num-devices=2 UUID=cdc2a9a9:63bbda21:f55e806c:a5371897 ARRAY /dev/md3 level=raid1 num-devices=2 UUID=eca75495:9c9ce18c:d2bac587:f1e79d80 # This file was auto-generated on Wed, 04 Nov 2009 11:32:16 +0100 # by mkconf $Id$ And here is the out put from /usr/share/mdadm/mkconf # mdadm.conf # # Please refer to mdadm.conf(5) for information about this file. # # by default, scan all partitions (/proc/partitions) for MD superblocks. # alternatively, specify devices to scan, using wildcards if desired. DEVICE partitions # auto-create devices with Debian standard permissions CREATE owner=root group=disk mode=0660 auto=yes # automatically tag new arrays as belonging to the local system HOMEHOST <system> # instruct the monitoring daemon where to send mail alerts MAILADDR root # definitions of existing MD arrays ARRAY /dev/md1 UUID=c622dd79:496607cf:c230666b:5103eba0 ARRAY /dev/md2 UUID=24120323:8c54087c:c230666b:5103eba0 ARRAY /dev/md5 UUID=5d45b20c:04d8138f:c230666b:5103eba0 ARRAY /dev/md6 UUID=eef74de5:9267b2a1:c230666b:5103eba0 # This configuration was auto-generated on Sat, 25 Feb 2012 13:10:00 +1030 # by mkconf 3.1.4-1+8efb9d1+squeeze1 As I understand it I need to replace the four lines that start with 'ARRAY' in the /etc/mdadm/mdadm.conf file with the different four 'ARRAY' lines from the /usr/share/mdadm/mkconf output. When I did this and then ran update-initramfs -u there were no more warnings. Is what I have done above correct? I am now terrified of rebooting the server for fear it will not reboot and being a remote dedicated server this would certainly mean downtime and possibly would be expensive to get running again. FOLLOW UP (response to question): the output from mount: /dev/md1 on / type ext3 (rw,usrquota,grpquota) tmpfs on /lib/init/rw type tmpfs (rw,nosuid,mode=0755) proc on /proc type proc (rw,noexec,nosuid,nodev) sysfs on /sys type sysfs (rw,noexec,nosuid,nodev) udev on /dev type tmpfs (rw,mode=0755) tmpfs on /dev/shm type tmpfs (rw,nosuid,nodev) devpts on /dev/pts type devpts (rw,noexec,nosuid,gid=5,mode=620) /dev/md2 on /boot type ext2 (rw) /dev/md5 on /tmp type ext3 (rw) /dev/md6 on /home type ext3 (rw,usrquota,grpquota) mdadm --detail /dev/md0 mdadm: md device /dev/md0 does not appear to be active. mdadm --detail /dev/md1 /dev/md1: Version : 0.90 Creation Time : Sun Aug 14 09:43:08 2011 Raid Level : raid1 Array Size : 31463232 (30.01 GiB 32.22 GB) Used Dev Size : 31463232 (30.01 GiB 32.22 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 1 Persistence : Superblock is persistent Update Time : Sat Feb 25 14:03:47 2012 State : clean Active Devices : 2 Working Devices : 2 Failed Devices : 0 Spare Devices : 0 UUID : c622dd79:496607cf:c230666b:5103eba0 Events : 0.24 Number Major Minor RaidDevice State 0 8 1 0 active sync /dev/sda1 1 8 17 1 active sync /dev/sdb1 mdadm --detail /dev/md2 /dev/md2: Version : 0.90 Creation Time : Sun Aug 14 09:43:09 2011 Raid Level : raid1 Array Size : 104320 (101.89 MiB 106.82 MB) Used Dev Size : 104320 (101.89 MiB 106.82 MB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 2 Persistence : Superblock is persistent Update Time : Sat Feb 25 13:20:20 2012 State : clean Active Devices : 2 Working Devices : 2 Failed Devices : 0 Spare Devices : 0 UUID : 24120323:8c54087c:c230666b:5103eba0 Events : 0.30 Number Major Minor RaidDevice State 0 8 2 0 active sync /dev/sda2 1 8 18 1 active sync /dev/sdb2 mdadm --detail /dev/md3 mdadm: md device /dev/md3 does not appear to be active. mdadm --detail /dev/md5 /dev/md5: Version : 0.90 Creation Time : Sun Aug 14 09:43:09 2011 Raid Level : raid1 Array Size : 2104448 (2.01 GiB 2.15 GB) Used Dev Size : 2104448 (2.01 GiB 2.15 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 5 Persistence : Superblock is persistent Update Time : Sat Feb 25 14:09:03 2012 State : clean Active Devices : 2 Working Devices : 2 Failed Devices : 0 Spare Devices : 0 UUID : 5d45b20c:04d8138f:c230666b:5103eba0 Events : 0.30 Number Major Minor RaidDevice State 0 8 5 0 active sync /dev/sda5 1 8 21 1 active sync /dev/sdb5 mdadm --detail /dev/md6 /dev/md6: Version : 0.90 Creation Time : Sun Aug 14 09:43:09 2011 Raid Level : raid1 Array Size : 453659456 (432.64 GiB 464.55 GB) Used Dev Size : 453659456 (432.64 GiB 464.55 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 6 Persistence : Superblock is persistent Update Time : Sat Feb 25 14:10:00 2012 State : active Active Devices : 2 Working Devices : 2 Failed Devices : 0 Spare Devices : 0 UUID : eef74de5:9267b2a1:c230666b:5103eba0 Events : 0.31 Number Major Minor RaidDevice State 0 8 6 0 active sync /dev/sda6 1 8 22 1 active sync /dev/sdb6 FOLLOW UP 2 (response to question): Output from /etc/fstab /dev/md1 / ext3 defaults,usrquota,grpquota 1 1 devpts /dev/pts devpts mode=0620,gid=5 0 0 proc /proc proc defaults 0 0 #usbdevfs /proc/bus/usb usbdevfs noauto 0 0 /dev/cdrom /media/cdrom auto ro,noauto,user,exec 0 0 /dev/dvd /media/dvd auto ro,noauto,user,exec 0 0 # # # /dev/md2 /boot ext2 defaults 1 2 /dev/sda3 swap swap pri=42 0 0 /dev/sdb3 swap swap pri=42 0 0 /dev/md5 /tmp ext3 defaults 0 0 /dev/md6 /home ext3 defaults,usrquota,grpquota 1 2

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• How to OCR a specific region of a MODI.Document?

  - by Mark Kadlec

  I need to OCR a specific region of a scanned document and I am using MODI (Microsoft's Document Imaging COM object). My code currently OCR's the entire page (quite accurately!), but I would like to target a specific region of the page where the text is always static (order number). How can I do this? Here is my code for the page: MODI.Document md = new MODI.Document(); md.Create("c:\\temp\\mpk.tiff"); md.OCR(MODI.MiLANGUAGES.miLANG_ENGLISH, true, true); MODI.Image image = (MODI.Image)md.Images[0]; FileStream createFile = new FileStream("c:\\temp\\mpk.txt", FileMode.CreateNew); StreamWriter writeFile = new StreamWriter(createFile); writeFile.Write(image.Layout.Text); writeFile.Close(); md.Close(); Can I somehow specify the region of the image? Any help would be greatly appreciated!

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• jQuery .closest returns undefined

  - by Andy Holmes

  I've got the code below which works fine, however the jquery to add the items doesnt find the data-parent-room value and just returns undefined. This is the only thing not working :( HTML: <div id="inventoryRooms"> <!--BOX SHART--> <div class="widget box formHolder" data-parent-room="1"> <!--ROOM NAME--> <form class="widget-header rooms"> <input type="text" placeholder="Type Room name" name="roomName[]" class="form-input add-room-input input-width-xxlarge"> <input type="hidden" class="roomId" name="roomId[]"> <input type="hidden" class="inventoryId" name="inventoryId[]" value="<?=$_GET['inventory_id']?>"> <div class="toolbar no-padding"> <div class="btn-group"> <span class="btn saveRoom"><i class="icon-ok"></i> Save Room</span> </div> </div> </form> <!--/END--> <!--GENERIC ROW TITLES--> <div class="widget-header header-margin hide"> <div class="row row-title"> <div class="col-md-3"><h5>ITEM</h5></div> <div class="col-md-3"><h5>DESCRIPTION</h5></div> <div class="col-md-3"><h5>CONDITION</h5></div> <div class="col-md-2"><h5>PHOTOGRAPH</h5></div> <div class="col-md-1 align-center"><h5><i class="icon-cog"> </i></h5></div> </div> </div> <!--/END--> <!--ADD ITEM--> <div class="items"> </div> <!--/END--> <div class="toolbar-small"> <div class="btn-group"> <span class="btn addItem"><i class="icon-plus"></i> Add Item</span> <span data-toggle="dropdown" class="btn dropdown-toggle"><i class="icon-gear"></i> Options<span class="button-space"></span><i class="icon-angle-down"></i></span> <ul class="dropdown-menu pull-right"> <li><a href="#"><i class="icon-trash"></i> Delete Room</a></li> </ul> </div> </div> </div> </div> jQuery: $(document).on('click','.addItem', function(){ $('<!--ROW START-->\ <form class="widget-content item">\ <div class="row">\ <div class="col-md-3"><input type="text" class="form-control" name="itemName[]"></div>\ <div class="col-md-3"><textarea class="auto form-control" name="itemDescription[]" cols="20" rows="1" style="word-wrap: break-word; resize: vertical;"></textarea></div>\ <div class="col-md-3"><textarea class="auto form-control" name="itemCondition[]" cols="20" rows="1" style="word-wrap: break-word; resize: vertical;"></textarea></div>\ <input type="hidden" class="itemId" name="itemId[]" value="">\ <input type="hidden" name="itemInventoryId[]" value="<?=$_GET["inventory_id"]?>">\ <input type="hidden" name="itemParent[]" value="'+$(this).closest().attr('data-parent-room')+'">\ <div class="col-md-2">\ <div class="fileinput-holder input-group">\ <input id="fileupload" type="file" name="files[]" data-url="uploads/">\ </div>\ </div>\ <div class="col-md-1 align-center"><i class="save icon-ok large"> </i>&nbsp;&nbsp;&nbsp;<i class="delete icon-trash large"> </i></div>\ </div>\ </form>\ <!--/ROW END-->').fadeIn(500).appendTo($(this).parents().siblings('.items')); $(this).parent().parent().siblings('.widget-header, .header-margin, .hide').removeClass('hide').fadeIn(); }); Like i say, it all works fine apart from that damn data-parent-room value. Any help is appreciated! using jQuery 1.10.1

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• Suggestion for a Non-CSE developer

  - by Md.lbrahim

  Due to financial problems, I couldn't go for CSE in my country and had to settle for a BCIS honors degree. Now, after quite some time, when I want to go for a higher position in software development then I get asked about algorithms and basics that I have missed back in uni. This is affecting my chances of getting selected and I cannot afford that any longer. My question would be that what you would suggest smn like me to do in order to cover the 'basics' without any university or educational institute e.g. books,learn C++,etc? Any suggestion (including -ve) is welcomed and appreciated.

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• Why Sql not bringing back results unless I set varchar size?

  - by Tom

  I've got an SQL script that fetches results based on the colour passed to it, but unless I set the size of the variable defined as a varchar to (50) no results are returned. If I use: like ''+@Colour+'%' then it works but I don't really want to use it in case it brings back results I don't need or want. The column FieldValue has a type of Varchar(Max) (which can't be changed as this field can store different things). It is part of aspdotnetstorefront package so I can't really change the tables or field types. This doesn't work: declare @Col VarChar set @Col = 'blu' select * from dbo.MetaData as MD where MD.FieldValue = @Colour But this does work: declare @Col VarChar (50) set @Col = 'blu' select * from dbo.MetaData as MD where MD.FieldValue = @Colour The code is used in the following context, but should work either way <query name="Products" rowElementName="Variant"> <sql> <![CDATA[ select * from dbo.MetaData as MD where MD.Colour = @Colour ]]> </sql> <queryparam paramname="@ProductID" paramtype="runtime" requestparamname="pID" sqlDataType="int" defvalue="0" validationpattern="^\d{1,10}$" /> <queryparam paramname="@Colour" paramtype="runtime" requestparamname="pCol" sqlDataType="varchar" defvalue="" validationpattern=""/> </query> Any Ideas?

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• Improve speed of a JOIN in MySQL

  - by ran2

  Dear all, I know there a similar threads around, but this is really the first time I realize that query speed might affect me - so it´s not that easy for me to really make the transfer from other folks problems. That being said I have using the following query successfully with smaller data, but if I use it on what are mildly large tables (about 120,000 records). I am waiting for hours. INSERT INTO anothertable (id,someint1,someint1,somevarchar1,somevarchar1) SELECT DISTINCT md.id,md.someint1,md.someint1,md.somevarchar1,pd.somevarchar1 from table1 AS md JOIN table2 AS pd ON (md.id = pd.id); Tables 1 and 2 contain about 120,000 records. The query has been running for almost 2 hours right now. Is this normal? Do I just have to wait. I really have no idea, but I am pretty sure that one could do it better since it´s my very first try. I read about indexing, but dont know yet what to index in my case? Thanks for any suggestions - feel free to point my to the very beginners guides ! best matt

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• What is the proper way to code a read-while loop in Scala?

  - by ARKBAN

  What is the "proper" of writing the standard read-while loop in Scala? By proper I mean written in a Scala-like way as opposed to a Java-like way. Here is the code I have in Java: MessageDigest md = MessageDigest.getInstance( "MD5" ); InputStream input = new FileInputStream( "file" ); byte[] buffer = new byte[1024]; int readLen; while( ( readLen = input.read( buffer ) ) != -1 ) md.update( buffer, 0, readLen ); return md.digest(); Here is the code I have in Scala: val md = MessageDigest.getInstance( hashInfo.algorithm ) val input = new FileInputStream( "file" ) val buffer = new Array[ Byte ]( 1024 ) var readLen = 0 while( readLen != -1 ) { readLen = input.read( buffer ) if( readLen != -1 ) md.update( buffer, 0, readLen ) } md.digest The Scala code is correct and works, but feels very un-Scala-ish. For one it is a literal translation of the Java code, taking advantage of none of the advantages of Scala. Further it is actually longer than the Java code! I really feel like I'm missing something, but I can't figure out what. I'm fairly new to Scala, and so I'm asking the question to avoid falling into the pitfall of writing Java-style code in Scala. I'm more interested in the Scala way to solve this kind of problem than in any specific helper method that might be provided by the Scala API to hash a file. (I apologize in advance for my ad hoc Scala adjectives throughout this question.)

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• Ubuntu server 12.04.03 not checking disk partitions on reboot?

  - by jamesc

  My MOTD is showing: *** /dev/md2 will be checked for errors at next reboot *** *** /dev/md1 will be checked for errors at next reboot *** *** /dev/md3 will be checked for errors at next reboot *** However, a standard sudo shutdown -r now does not appear to check the disks and the message remains. My guess is that the partitions 'should' be checked and that they are not being... so how can I get Ubuntu to check the partitions at reboot and keep things nice and safe? Update - this is the output of cat /etc/fstab proc /proc proc defaults 0 0 none /dev/pts devpts gid=5,mode=620 0 0 /dev/md/0 none swap sw 0 0 /dev/md/1 /boot ext3 defaults 0 0 /dev/md/2 / ext4 defaults 0 0 /dev/md/3 /home ext4 defaults 0 0 Update 2 - One message gone... Using @christianwolff's suggestions... sudo rm /var/lib/update-notifier/fsck-at-reboot sudo touch /forcefsck sudo shutdown -r now And now the motd is down to *** /dev/md1 will be checked for errors at next reboot *** *** /dev/md3 will be checked for errors at next reboot *** So 'md2(ext4)' has been checked and the message updated.

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• Linux software RAID6: 3 drives offline - how to force online?

  - by Ole Tange

  This is similar to 3 drives fell out of Raid6 mdadm - rebuilding? except that it is not due to a failing cable. Instead the 3rd drive fell offline during rebuild of another drive. The drive failed with: kernel: end_request: I/O error, dev sdc, sector 293732432 kernel: md/raid:md0: read error not correctable (sector 293734224 on sdc). After rebooting both these sectors and the sectors around them are fine. This leads me to believe the error is intermittent and thus the device simply took too long to error correct the sector and remap it. I expect that no data was written to the RAID after it failed. Therefore I hope that if I can kick the last failing device online that the RAID is fine and that the xfs_filesystem is OK, maybe with a few missing recent files. Taking a backup of the disks in the RAID takes 24 hours, so I would prefer that the solution works the first time. I have therefore set up a test scenario: export PRE=3 parallel dd if=/dev/zero of=/tmp/raid${PRE}{} bs=1k count=1000k ::: 1 2 3 4 5 parallel mknod /dev/loop${PRE}{} b 7 ${PRE}{} \; losetup /dev/loop${PRE}{} /tmp/raid${PRE}{} ::: 1 2 3 4 5 mdadm --create /dev/md$PRE -c 4096 --level=6 --raid-devices=5 /dev/loop${PRE}[12345] cat /proc/mdstat mkfs.xfs -f /dev/md$PRE mkdir -p /mnt/disk2 umount -l /mnt/disk2 mount /dev/md$PRE /mnt/disk2 seq 1000 | parallel -j1 mkdir -p /mnt/disk2/{}\;cp /bin/* /mnt/disk2/{}\;sleep 0.5 & mdadm --fail /dev/md$PRE /dev/loop${PRE}3 /dev/loop${PRE}4 cat /proc/mdstat # Assume reboot so no process is using the dir kill %1; sync & kill %1; sync & # Force fail one too many mdadm --fail /dev/md$PRE /dev/loop${PRE}1 parallel --tag -k mdadm -E ::: /dev/loop${PRE}? | grep Upda # loop 2,5 are newest. loop1 almost newest => force add loop1 Next step is to add loop1 back - and this is where I am stuck. After that do a xfs-consistency check. When that works, check that the solution also works on real devices (such a 4 USB sticks).

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• Foreign keys and pagination

  - by whitstone86

  This is my pagination script: <?php /*********************************** * PhpMyCoder Paginator * * Created By PhpMyCoder * * 2010 PhpMyCoder * * ------------------------------- * * You may use this code as long * * as this notice stays intact and * * the proper credit is given to * * the author. * ***********************************/ ?> <head> <title> Pagination Test - Created By PhpMyCoder</title> <style type="text/css"> #nav { font: normal 13px/14px Arial, Helvetica, sans-serif; margin: 2px 0; } #nav a { background: #EEE; border: 1px solid #DDD; color: #000080; padding: 1px 7px; text-decoration: none; } #nav strong { background: #000080; border: 1px solid #DDD; color: #FFF; font-weight: normal; padding: 1px 7px; } #nav span { background: #FFF; border: 1px solid #DDD; color: #999; padding: 1px 7px; } </style> </head> <?php //Require the file that contains the required classes include("pmcPagination.php"); //PhpMyCoder Paginator $paginator = new pmcPagination(20, "page"); //Connect to the database mysql_connect("localhost","root","PASSWORD"); //Select DB mysql_select_db("tvguide"); //Select only results for today and future $result = mysql_query("SELECT programme, channel, airdate, expiration, episode, setreminder FROM epdata1 where airdate >= now() order by expiration GROUP BY airdate"); //You can also add reuslts to paginate here mysql_data_seek($queryresult,0) ; while($row = mysql_fetch_array($result)) { $paginator->add(new paginationData($row['programme'], $row['channel'], $row['airdate'], $row['expiration'], $row['episode'], $row['setreminder'])); } ?> <?php //Show the paginated results $paginator->paginate (); ?><? include("pca-footer1.php"); ?> <?php //Show the navigation $paginator->navigation(); ?> However, I have two tables in this, and they are epdata1 (where the airtimes for my show House M.D. are) and housemdep plus the setreminder table. How can I use foreign keys in relation to this? I'm not sure if this will work for my script, but am willing to try. What I would like to do is to select certain episodes from the table housemdep (episodes of the show) and if any are selected it shows them as this: House M.D. showing on Channel 1 June 6th - 8:00pm "Wilson" Set Reminder House M.D. showing on Channel 1 June 7th - 1:30am "Wilson" Set Reminder House M.D. showing on Channel 1 June 7th - 12:55pm "House's Head" Set Reminder or like this, if I have not selected an episode from the row: House M.D. showing on Channel 1 June 7th - 8:00pm "House's Head" Set Reminder House M.D. showing on Channel 1 June 8th - 9:00pm Set Reminder House M.D. showing on Channel 1 June 9th - 2:30pm Set Reminder House M.D. showing on Channel 1 June 7th - 8:00pm "Que Sera Sera" Set Reminder Foreign keys and relationship of interlinked tables are new to me, if anyone could help I'd appreciate this. I've tried some of what Google suggested on foreign keys in another version of this script (this is a clone of the original on my localhost server running Apache and PHP 5.28/MySQL), but am not sure how to implement this. Thanks.

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• preseeded installation keeps asking for confirmation while creating RAID-Partitions on certain hardware-platform

  - by Marc Shennon

  I am aware of the partman-md/confirm_nooverwrite thing, that was the solution to most of this problems in the past. The thing is, that the preseed-file works for almost all hardware-platforms I tested, but only for one (Primergy MX130) it keeps asking for confirmation, before writing the partition-layout to the disks. All machines I tested are running with two SATA Disks, nothing special. I'm not really sure, what information could be needed in order to investigate the cause of this behaviour, but I would of course be willing to provide more information, if someone has an idea. Relevant part of the preseed file is the following: d-i partman-auto/disk string /dev/sda /dev/sdb d-i partman-auto/method string raid d-i partman-md/confirm boolean true d-i partman-partitioning/confirm_write_new_label boolean true d-i partman-md/device_remove_md boolean true d-i partman/choose_partition select finish d-i partman-md/confirm_nooverwrite boolean true # Write the changes to disks? d-i partman/confirm boolean true d-i mdadm/boot_degraded boolean true # RECIPE # Next you need to specify the physical partitions that will be used. d-i partman-auto/expert_recipe string \ multiraid :: \ 500 10000 1000000000 raid $lvmignore{ }\ $primary{ } \ method{ raid } \ . \ 512 1000 786 raid $lvmignore{ }\ $primary{ } \ method{ raid } \ . \ 8192 10240 10240 raid $lvmignore{ }\ method{ raid } \ . # Parameters are: # <raidtype> <devcount> <sparecount> <fstype> <mountpoint> <devices> <sparedevices> d-i partman-auto-raid/recipe string \ 1 2 0 ext4 / /dev/sda1#/dev/sdb1 . \ 1 2 0 ext2 /boot /dev/sda2#/dev/sdb2 . \ 1 2 0 swap - /dev/sda5#/dev/sdb5 .

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• Problem in udp socket programing in c

  - by Md. Talha

  I complile the following C code of UDP client after I run './udpclient localhost 9191' in terminal.I put "Enter Text= " as Hello, but it is showing error in sendto as below: Enter text: hello hello : error in sendto()guest-1SDRJ2@md-K42F:~/Desktop$ " Note: I open 1st the server port as below in other terminal ./server 9191. I beleive there is no error in server code. The udp client is not passing message to server. If I don't use thread , the message is passing .But I have to do it by thread. UDP client Code: /* simple UDP echo client */ #include <sys/types.h> #include <sys/socket.h> #include <netinet/in.h> #include <arpa/inet.h> #include <netdb.h> #include <stdio.h> #include <pthread.h> #define STRLEN 1024 static void *readdata(void *); static void *writedata(void *); int sockfd, n, slen; struct sockaddr_in servaddr; char sendline[STRLEN], recvline[STRLEN]; int main(int argc, char *argv[]) { pthread_t readid,writeid; struct sockaddr_in servaddr; struct hostent *h; if(argc != 3) { printf("Usage: %s <proxy server ip> <port>\n", argv[0]); exit(0); } /* create hostent structure from user entered host name*/ if ( (h = gethostbyname(argv[1])) == NULL) { printf("\n%s: error in gethostbyname()", argv[0]); exit(0); } /* create server address structure */ bzero(&servaddr, sizeof(servaddr)); /* initialize it */ servaddr.sin_family = AF_INET; memcpy((char *) &servaddr.sin_addr.s_addr, h->h_addr_list[0], h->h_length); servaddr.sin_port = htons(atoi(argv[2])); /* get the port number from argv[2]*/ /* create a UDP socket: SOCK_DGRAM */ if ( (sockfd = socket(AF_INET,SOCK_DGRAM, 0)) < 0) { printf("\n%s: error in socket()", argv[0]); exit(0); } pthread_create(&readid,NULL,&readdata,NULL); pthread_create(&writeid,NULL,&writedata,NULL); while(1) { }; close(sockfd); } static void * writedata(void *arg) { /* get user input */ printf("\nEnter text: "); do { if (fgets(sendline, STRLEN, stdin) == NULL) { printf("\n%s: error in fgets()"); exit(0); } /* send a text */ if (sendto(sockfd, sendline, sizeof(sendline), 0, (struct sockaddr *) &servaddr, sizeof(servaddr)) < 0) { printf("\n%s: error in sendto()"); exit(0); } }while(1); } static void * readdata(void *arg) { /* wait for echo */ slen = sizeof(servaddr); if ( (n = recvfrom(sockfd, recvline, STRLEN, 0, (struct sockaddr *) &servaddr, &slen)) < 0) { printf("\n%s: error in recvfrom()"); exit(0); } /* null terminate the string */ recvline[n] = 0; fputs(recvline, stdout); }

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• Problem with executing dssp (secondary structure assignment)

  - by Mana

  I followed a previous post to install dssp on ubuntu How to install dssp (secondary structure assignments) under 12.04? After the installation I tried to execute dssp which was in /usr/local/bin/dssp But it gave me the following error bash: /usr/local/bin/dssp: cannot execute binary file Also I tried to analyse some trajectory files from a simulation using the code do_dssp -s md.tpr -f traj.xtc But it also failed giving me the error below Reading file md.tpr, VERSION 4.5.5 (single precision) Reading file md.tpr, VERSION 4.5.5 (single precision) Segmentation fault (core dumped) Please post me a solution for this problem. Thank you!

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• Need AngularJS grid resizing directive to resize "thumbnail" that contains no image

  - by thebravedave

  UPDATE Plunker to project: http://plnkr.co/edit/oKB96szQhqwpKQbOGUDw?p=preview I have an AngularJS project that uses AngularJS Bootstrap grids. I need all of the grid elements to have the same size so they stack properly. I created an angularJs directive that auto resizes the grid element when placed in said grid element. I have 2 directives that do this for me Directive 1: onload Directive 2: imageonload Directive 2 works. If the grid element uses an image, after the image loads then the directive triggers an event that sends the grid elements height to all other grid elements. If that height sent out via the event is greater than that of the grid element which is listening to the event then that listening grid element changes it's height to be the greater height. This way the largest height becomes the height for all the grid elements. Directive 1 does not work. This one is placed on the outer most grid elements html element, and is triggered when the element loads. The problem is that when the element loads and the onload directive is called AngularJS has not yet filled out the data in said grid element. The outcome is that the real height after AngularJS data binds is not broadcast as an event. My only solution I have thought of (but haven't tried) is to add an image url to an image that exists but doesn't have any data in it, and place that in the grid element (the one that didn't have any images before placing the blank one in). I could then call imageonload instead of onload and I pretty sure the angularjs data binding will have taken place by then. the problem is that that is pretty hacky. I would rather be able to have not an image in the grid element, and be able to call my custom onload directive and have the onload directive calculate the height AFTER angularJS data binds to all of the data binding variables in the grid element. Here is my imageonload directive .directive('imageonload', function($rootScope) { return { restrict: 'A', link: function(scope, element, attrs) { scope.heightArray = []; scope.largestHeight = 50; element.bind('load', function() { broadcastThumbnailHeight(); }); scope.$on('imageOnLoadEvent', function(caller, value){ var el = angular.element(element); var id = el.prop('id'); var pageName = el.prop('title'); if(pageName == value[0]){ if(scope.largestHeight < value[1]){ scope.largestHeight = value[1]; var nestedString = el.prop('alt'); if(nestedString == "") nestedString = "1"; var nested = parseInt(nestedString); nested = nested - 1; var inte = 0; var thumbnail = el["0"]; var finalThumbnailContainer = thumbnail.parentElement; while(inte != nested){ finalThumbnailContainer = finalThumbnailContainer.parentElement; inte++; } var innerEl = angular.element(finalThumbnailContainer); var height = value[1]; innerEl.height(height); } } }); scope.$on('findHeightAndBroadcast', function(){ broadcastThumbnailHeight(); }); scope.$on('resetThumbnailHeight', function(){ scope.largestHeight = 50; }); function broadcastThumbnailHeight(){ var el = angular.element(element); var id = el.prop('id'); var alt = el.prop('alt'); if(alt == "") alt = "1"; var nested = parseInt(alt); nested = nested - 1; var pageName = el.prop('title'); var inte = 1; var thumbnail = el["0"]; var finalThumbnail = thumbnail.parentElement; while(inte != nested){ finalThumbnail = finalThumbnail.parentElement; inte++; } var elZero = el["0"]; var clientHeight = finalThumbnail.clientHeight; var arr = []; arr[0] = pageName; arr[1] = clientHeight; $rootScope.$broadcast('imageOnLoadEvent', arr); } } }; }) And here is my onload directive .directive('onload', function($rootScope) { return { restrict: 'A', link: function(scope, element, attrs) { scope.largestHeight=100; getHeightAndBroadcast(); scope.$on('onLoadEvent', function(caller, value){ var el = angular.element(element); var id = el.prop('id'); var pageName = el.prop('title'); if(pageName == value[0]){ if(scope.largestHeight < value[1]){ scope.largestHeight = value[1]; var height = value[1]; el.height(height); } } }); function getHeightAndBroadcast(){ var el = angular.element(element); var h = el["0"].children; var thumbnailHeightElement = angular.element(h); var pageName = el.prop("title"); var clientHeight = thumbnailHeightElement["0"].clientHeight; var arr = []; arr[0] = pageName; arr[1] = clientHeight; if(clientHeight != undefined) $rootScope.$broadcast('onLoadEvent', arr); } } }; }) Here is an example of one of my grid elements that uses imageonload. Note the imageonload directive in the image html element. This works. There is also an onload directive on the outer most html of the grid element. That does not work. I have stepped through this carefully in Firebug and saw that the onload was calculating the height before AngularJS data binding was complete. <div class="thumbnail col-md-3" id="{{product.id}}" title="thumbnailAdminProductsGrid" onload> <div class="row"> <div class="containerz"> <div class="row-fluid"> <div class="col-md-2"></div> <div class="col-md-7"> <div class="textcenterinline"> <!--tag--><img class="img-responsive" id="{{product.id}}" title="imageAdminProductsGrid" alt=6 ng-src="{{product.baseImage}}" imageonload/><!--end tag--> </div> </div> </div> <div class="caption"> <div class="testing"> <div class="row-fluid"> <div class="col-md-12"> <h3 class=""> <!--tag--><a href="javascript:void(0);" ng-click="loadProductView('{{product.id}}')">{{product.name}}</a><!--end tag--> </h3> </div> </div> <div class="row-fluid"> <div class="col-md-12"> <p class="lead"><!--tag--> {{product.price}}</p><!--end tag--> </div> </div> <div class="row-fluid"> <div class="col-md-12"> <p><!--tag-->{{product.inStock}} units available<!--end tag--></p> </div> </div> <div class="row-fluid"> <div class="col-md-12"> <p class=""><!--tag-->{{product.generalDescription}}<!--end tag--></p> </div> </div> <!--tag--> <div data-ng-if="product.specialized=='true'"> <div class="row-fluid"> <div class="col-md-12" ng-repeat="varCat in product.varietyCategoriesAndOptions"> <b><h4>{{varCat.varietyCategoryName}}</h4></b> <select ng-model="varCat.varietyCategoryOption" ng-options="value.varietyCategoryOptionId as value.varietyCategoryOptionValue for (key,value) in varCat.varietyCategoryOptions"> </select> </div> </div> </div> <!--end tag--> <div class="row-fluid"> <div class="col-md-12"> <!--tag--><div ng-if="product.weight==0"><b>Free Shipping</b></div><!--end tag--> </div> </div> </div> </div> </div> </div> Here is an example of one of the html for one of my grid elements that only uses the "onload" directive and not "imageonload" <div class="thumbnail col-md-3" title="thumbnailCouponGrid" onload> <div class="innnerContainer"> <div class="text-center"> {{coupon.name}} <br /> <br /> <b>Description</b> <br /> {{coupon.description}} <br /> <br /> <button class="btn btn-large btn-primary" ng-click="goToCoupon()">View Coupon Details</button> </div> </div> The imageonload function might look a little confusing because I use the img html attribute "alt" to signal to the directive how many levels the imageonload is placed below the outermost html for the grid element. We have to have this so the directive knows which html element to set the new height on. also I use the "title" attribute to set which grid this grid resizing is for (that way you can use the directive multiple times on the same page for different grids and not have the events for the wrong grid triggered). Does anyone know how I can get the "onload" directive to get called AFTER angularJS binds to the grid element? Just for completeness here are 2 images (almost looks like just 1), the second is a grid that contains grid elements that have images and use the "imageonload" directive and the first is a grid that contains grid elements that do not use images and only uses the "onload" directive.

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• How to create a custom ADO Multi Dimensional Catalog with no database

  - by Alan Clark

  Does anyone know of an example of how to dynamically define and build ADO MD (ActiveX Data Objects Multidimensional) catalogs and cube definitions with a set of data other than a database? Background: we have a huge amount of data in our application that we export to a database and then query using the usual SQL joins, groups, sums etc to produce reports. The data in the application is originally in objects and arrays. The problem is the amount of data is so large the export can take 2 hours. So I am trying to figure out a good way of querying the objects in memory, either by a custom OLAP algorithm or library, or ADO MD. But I haven't been able to find an example of using ADO MD without a database behind it. We are using Delphi 2010 so would use ADO ActiveX but I imagine the ADO.NET MD is similar. I realize that if the application data was already stored in a database the problem would solve itself. Also if Delphi had LINQ capability I could query the objects and arrays that way.

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