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• Missing tables on Scaffold Dynamic Data page

  - by Ben Amada

  I created a Linq-to-SQL DBML for the first time. I dragged and dropped all my tables over to the designer. The tables all appear in the designer.cs file. In Global.asax, I also have model.RegisterContext() with the ScaffoldAllTables = true option. The routes are also setup. I can pull up the Scaffolding page, but there's at least one table that is missing that I'm trying to get to show up. This missing table has a relationship with a child table that references it. The child table appears. When viewing data for the child table, the column that references the missing/parent table shows the numeric PK int value, rather than showing the "name". So instead of showing "Cars" it shows 1, and instead of showing "Planes" it shows 2, etc. There's another table in the DB that has the same type of structure as the missing table, and it is correctly appearing in the scaffolded tables. For this missing table, I've tried explicitly adding the ScaffoldTable attribute to no avail. Does anyone know what would cause a table like this to not appear in the list Scaffolded tables? Thanks very much.

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• What is the nicest way to parse this in C++ ?

  - by ereOn

  Hi, In my program, I have a list of "server address" in the following format: host[:port] The brackets here, indicate that the port is optional. host can be a hostname, an IPv4 or IPv6 address. port, if present can be a numeric port number or a service string (like: "http" or "ssh"). If port is present and host is an IPv6 address, host must be in "bracket-enclosed" notation (Example: [::1]) Here are some valid examples: localhost localhost:11211 127.0.0.1:http [::1]:11211 ::1 [::1] And an invalid example: ::1:80 // Invalid: Is this the IPv6 address ::1:80 and a default port, or the IPv6 address ::1 and the port 80 ? ::1:http // This is not ambigous, but for simplicity sake, let's consider this is forbidden as well. My goal is to separate such entries in two parts (obviously host and port). I don't care if either the host or port are invalid as long as they don't contain a : (290.234.34.34.5 is ok for host, it will be rejected in the next process); I just want to separate the two parts, or if there is no port part, to know it somehow. I tried to do something with std::stringstream but everything I come up to seems hacky and not really elegant. How would you do this in C++ ? I don't mind answers in C but C++ is prefered. Any boost solution is welcome as well. Thank you.

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• Check if date is allowed weekday in php?

  - by moogeek

  Hello! I'm stuck with a problem how to check if a specific date is within allowed weekdays array in php. For example, function dateIsAllowedWeekday($_date,$_allowed) { if ((isDate($_date)) && (($_allowed!="null") && ($_allowed!=null))){ $allowed_weekdays=json_decode($_allowed); $weekdays=array(); foreach($allowed_weekdays as $wd){ $weekday=date("l",date("w",strtotime($wd))); array_push($weekdays,$weekday); } if(in_array(date("l",strtotime($_date)),$weekdays)){return TRUE;} else {return FALSE;} } else {return FALSE;} } ///////////////////////////// $date="21.05.2010"; $wd="[0,1,2]"; if(dateIsAllowedWeekday($date,$wd)){echo "$date is within $wd weekday values!";} else{echo "$date isn't within $wd weekday values!"} I have input dates formatted as "d.m.Y" and an array returned from database with weekday numbers (formatted as 'Numeric representation of the day of the week') like [0,1,2] - (Sunday,Monday,Tuesday). The returned string from database can be "null", so i check it too. Them, the isDate function checks whether date is a date and it is ok. I want to check if my date, for example 21.05.2010 is an allowed weekday in this array. My function always returns TRUE and somehow weekday is always 'Thursday' and i don't know why... Is there any other ways to check this or what can be my error in the code above? thx

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• How can I solve the Log Pile wooden puzzle with a computer program?

  - by craig1410

  Can anyone suggest how to solve the Log Pile wooden puzzle using a computer program? See here to visualise the puzzle: http://www.puzzlethis.co.uk/products/madcow/the_log_pile.htm The picture only shows some of the pieces. The full set of 10 pieces are configured as follows with 1 representing a peg, -1 representing a hole and 0 representing neither a peg nor a hole. -1,1,0,-1,0 1,0,1,0,0 1,-1,1,0,0 -1,-1,0,0,-1 -1,1,0,1,0 0,1,0,0,1 1,0,-1,0,-1 0,-1,0,1,0 0,0,-1,1,-1 1,0,-1,0,0 The pieces can be interlocked in two layers of 5 pieces each with the top layer at 90 degrees to the bottom layer as shown in the above link. I have already created a solution to this problem myself using Java but I feel that it was a clumsy solution and I am interested to see some more sophisticated solutions. Feel free to either suggest a general approach or to provide a working program in the language of your choice. My approach was to use the numeric notation above to create an array of "Logs". I then used a combination/permutation generator to try all possible arrangements of the Logs until a solution was found where all the intersections equated to zero (ie. Peg to Hole, Hole to Peg or Blank to Blank). I used some speed-ups to detect the first failed intersection for a given permutation and move on to the next permutation. I hope you find this as interesting as I have. Thanks, Craig.

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• jQuery form zip code to state function

  - by Dakota R.

  I'm trying to convert a preexisting javascript function into a jQuery function. The function comes from http://javascript.internet.com/forms/zip-to-state.html and aims to convert a user-entered zip code into a state. I'm using jQuery 1.3.2, with all the necessary plugins, but I'm not very familiar with jQuery syntax and how to convert this from plain ol' Javascript syntax. The setState function takes two parameters, the zip code element and the state element, so I'm trying to do something like this: $('$zip_code').change( function () { setState($(this), $('#state')); }); Any thoughts on this syntax? Thanks, Dakota function getState(zip) { if ((parseInt(zipString.substr(zip / 4, 1), 16) & Math.pow(2, zip % 4)) && (zip.length == 5)) for (var i = 0; i < stateRange.length; i += 7) if (zip <= 1 * stateRange.substr(i, 5)) return stateRange.substr(i + 5, 2); return null; } function setState(txtZip, optionBox) { if (txtZip.value.length != 5 || isNaN(txtZip.value / 4)) { optionBox.options[0].selected = true; alert("Please enter a 5 digit, numeric zip code."); return; } var state = getState(txtZip.value); for (var i = 0; i < optionBox.options.length; i++) if (optionBox.options[i].value == state) return optionBox.options[i].selected = true; for (var i = 0; i < optionBox.options.length; i++) if (optionBox.options[i].value == "XX") return optionBox.options[i].selected = true; }

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• Do I need to Salt and Hash a randomly generated token?

  - by wag2639

  I'm using Adam Griffiths's Authentication Library for CodeIgniter and I'm tweaking the usermodel. I came across a generate function that he uses to generate tokens. His preferred approach is to reference a value from random.org but I considered that superfluous. I'm using his fall back approach of randomly generating a 20 character long string: $length = 20; $characters = '0123456789abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ'; $token = ''; for ($i = 0; $i < $length; $i++) { $token .= $characters[mt_rand(0, strlen($characters)-1)]; } He then hashes this token using a salt (I'm combing code from different functions) sha1($this->CI->config->item('encryption_key').$str); I was wondering if theres any reason to to run the token through the salted hash? I've read that simply randomly generating strings was a naive way of making random passwords but is the sh1 hash and salt necessary? Note: I got my encryption_key from https://www.grc.com/passwords.htm (63 random alpha-numeric)

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• AWK: compare apache dates without using regular expression

  - by smallmeans

  I'm writing a loganalysis application and wanted to grab apache log records between two certain dates. Assume that a date is formated as such: 22/Dec/2009:00:19 (day/month/year:hour:minute) Currently, I'm using a regular expression to replace the month name with its numeric value, remove the separators, so the above date is converted to: 221220090019 making a date comparison trivial.. but.. Running a regex on each record for large files, say, one containing a quarter million records, is extremely costly.. is there any other method not involving regex substitution? Thanks in advance Edit: here's the function doing the convertion/comparison function dateInRange(t, from, to) { sub(/[[]/, "", t); split(t, a, "[/:]"); match("JanFebMarAprMayJunJulAugSepOctNovDec", a[2]); a[2] = sprintf("%02d", (RSTART + 2) / 3); s = a[3] a[2] a[1] a[4] a[5]; return s >= from && s <= to; } "from" and "to" are the intervals in the aforementioned format, and "t" is the raw apache log date/time field (e.g [22/Dec/2009:00:19:36)

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• Spreadsheet_Excel_Writer data output is damaged

  - by dr3w

  I use Spreadsheet_Excel_Writer to generate .xls file and it works fine until I have to deal with a large amount of data. On certain stage it just writes some nonsense chars and quits filling certain columns. However some columns are field up to the end (generally numeric data) I'm not quite sure how the xls document is formed: row by row, or col by col... Also it is obviously not an error in a string, because when i cut out some data, the error appears a little bit further. I think there is no need in all of my code here are some essentials $filename = 'file.xls'; $workbook = & new Spreadsheet_Excel_Writer(); $workbook->setVersion(8); $contents =& $workbook->addWorksheet('Logistics'); $contents->setInputEncoding('UTF-8'); $workbook->send($filename); //here is the part where I write data down $contents->write(0, 0, 'Field A'); $contents->write(0, 1, 'Field B'); $contents->write(0, 2, 'Field C'); $ROW=1; foreach($ordersArr as $key=>$val){ $contents->write($ROW, 0, $val['a']); $contents->write($ROW, 1, $val['b']); $contents->write($ROW, 2, $val['c']); $ROW++; } $workbook->close();

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• row number over text column sort

  - by Marty Trenouth

  I'm having problems with dynamic sorting using ROW Number in SQL Server. I have it working but it's throwing errors on non numeric fields. What do I need to change to get sorts with Alpha Working??? ID Description 5 Test 6 Desert 3 A evil Ive got a Sql Prodcedure CREATE PROCEDURE [CRUDS].[MyTable_Search] -- Add the parameters for the stored procedure here -- Full Parameter List @ID int = NULL, @Description nvarchar(256) = NULL, @StartIndex int = 0, @Count int = null, @Order varchar(128) = 'ID asc' AS BEGIN -- SET NOCOUNT ON added to prevent extra result sets from -- interfering with SELECT statements. SET NOCOUNT ON; -- Insert statements for procedure here Select * from ( Select ROW_NUMBER() OVER (Order By case when @Order = 'ID asc' then [TableName].ID when @Order = 'Description asc' then [TableName].Description end asc, case when @Order = 'ID desc' then [TableName].ID when @Order = 'Description desc' then [TableName].Description end desc ) as row, [TableName].* from [TableName] where (@ID IS NULL OR [TableName].ID = @ID) AND (@Description IS NULL OR [TableName].Description = @Description) ) as a where row > @StartIndex and (@Count is null or row <= @StartIndex + @Count) order by case when @Order = 'ID asc' then a.ID when @Order = 'Description asc' then a.Description end asc, case when @Order = 'ID desc' then a.ID when @Order = 'Description desc' then a.Description end desc END

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• C++: defining maximum/minimum limits for a class

  - by Luis

  Basically what the title says... I have created a class that models time slots in a variable-granularity daily schedule (where for example the first time slot is 30 minutes, but the second time slot can be 40 minutes); the first available slot starts at (a value comparable to) 1. What I want to do now is to define somehow the maximum and minimum allowable values that this class takes and I have two practical questions in order to do so: 1.- does it make sense to define absolute minimum and maximum in such a way for a custom class? Or better, does it suffice that a value always compares as lower-than any other possible value of the type, given the class's defined relational operators, to be defined the min? (and analogusly for the max) 2.- assuming the previous question has an answer modeled after "yes" (or "yes but ..."), how do I define such max/min? I know that there is std::numeric_limits<> but from what I read it is intended for "numeric types". Do I interpret that as meaning "represented as a number" or can I make a broader assumption like "represented with numbers" or "having a correspondence to integers"? After all, it would make sense to define the minimum and maximum for a date class, and maybe for a dictionary class, but numeric_limits may not be intended for those uses (I don't have much experience with it). Plus, numeric_limits has a lot of extra members and information that I don't know what to make with. If I don't use numeric_limits, what other well-known / widely-used mechanism does C++ offer to indicate the available range of values for a class?

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• How does does ifstream eof() work?

  - by Chan

  Hello everyone, #include <vector> #include <list> #include <map> #include <set> #include <deque> #include <stack> #include <bitset> #include <algorithm> #include <functional> #include <numeric> #include <utility> #include <sstream> #include <iostream> #include <iomanip> #include <cstdio> #include <cmath> #include <cstdlib> #include <ctime> #include <cctype> #include <fstream> using namespace std; int main() { fstream inf( "ex.txt", ios::in ); while( !inf.eof() ) { std::cout << inf.get() << "\n"; } inf.close(); inf.clear(); inf.open( "ex.txt", ios::in ); char c; while( inf >> c ) { std::cout << c << "\n"; } return 0; } I'm really confused about eof() function. Suppose my ex.txt's content is: abc It always reads an extra character and show -1. when reading using eof()? But the inf c gave the correct output which was 'abc'? Can anyone help me explain this? Best regards, Chan Nguyen

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• Problem in DataBinding an Enum using dictionary approach to a combobox in WPF.

  - by Ashish Ashu

  I have a Dictionary which is binded to a combobox. I have used dictionary to provide spaces in enum. public enum Option {Enter_Value, Select_Value}; Dictionary<Option,string> Options; <ComboBox x:Name="optionComboBox" SelectionChanged="optionComboBox_SelectionChanged" SelectedValuePath="Key" DisplayMemberPath="Value" SelectedItem="{Binding Path = SelectedOption}" ItemsSource="{Binding Path = Options}" /> This works fine. My queries: 1. I am not able to set the initial value to a combo box. In above XAML snippet the line SelectedItem="{Binding Path = SelectedOption}" is not working. I have declared SelectOption in my viewmodel. This is of type string and I have intialized this string value in my view model as below: SelectedOption = Options[Options.Enter_Value].ToString(); 2. The combobox is binded to datadictionary which have two options first is "Enter_value" and second is "Select_value" which is actually Option enum. Based on the Option enum value I want to perform different action. For example if option is equal to option.Enter_value then Combo box becomes editable and user can enter the numeric value in it. if option is equal to option.Select_value value then the value comes from the database and the combo box becomes read only and shows the fetched value from the database. Please Help!!

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• How to refer to enum values inside nhibernate formula mapping specification?

  - by mark

  Dear ladies and sirs. I have two entities types: RunContainer parent entity type Run child entity type Run has a property Status, which is of type RunStatus, like so: public enum RunStatus { Created, Starting, // ... } public class Run { public int ContainerId { get; private set; } // ... public RunStatus Status { get; private set; } } RunContainer has a calculated property ActiveRunCount, like so: public class RunContainer { public int Id { get; private set; } // ... public int ActiveRunCount { get; private set; } } In the mapping for the RunContainer.ActiveRunCount property, I use the formula specification like so: <property name="ActiveRunCount" formula="(select count(r.Id) from Run r where r.ContainerId = Id and r.Status = 1)"/> My problem is that I refer to the RunStatus enum values in the formula by their respective numeric value, rather than the appropriate symbolic name. Can anyone tell me how can I use the symbolic name instead? Thanks.

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• JavaScript Keycode 46 is DEL Function key or (.) period sign?

  - by Omar

  Im writing some logic in JavaScript using jquery, where i must check the input content against a REGEX pattern ex: "^[a-zA-Z0-9_]*$" //Alpha-numeric and _ The logic is almost done, i just have a little problem filtering the function key DEL, my logic goes like this: var FunctionsKey = new Array(8, 9, 13, 16, 35, 36, 37, 39, 46); function keypressValidation(key) { if (config.regexExp != null) { if ($.inArray(key, FunctionsKey) != -1) { return true; } else { var keyChar = String.fromCharCode(key); return RegexCheck(keyChar); } } return true; } If the KeyCode is one of those in the array, i let it pass, if not i get the char and compare it against the REGEX. The problem is: in some Browsers the DEL and '.' (period sign) have the same key Code 46. So is there a better logic to filter the function keys or must i write a condition for that case, maybe removing the 46 from the array and try to convert it to char and if is (.) let it go to the Regex function if not let it pass? The other question will be are there more shared Key Codes in some browsers? EDIT: My suggested solution wont work because it doesn't matter which key the user pressed (DEL or period) i always get (.) as CHAR at least on OPERA and FF =(.

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• How to detect what allowed character in current Regular Expression by using JavaScript?

  - by Soul_Master

  In my web application, I create some framework that use to bind model data to control on page. Each model property has some rule like string length, not null and regular expression. Before submit page, framework validate any binded control with defined rules. So, I want to detect what character that is allowed in each regular expression rule like the following example. "^[0-9]$" allow only digit characters like 1, 2, 3. "^[a-zA-Z_][a-zA-Z_-0-9]+$" allow only a-z, - and _ characters However, this function should not care about grouping, positioning of allowed character. It just tells about possible characters only. By the way, complex regular expression like find two words near(\bword1\W+(?:\w+\W+){1,6}?word2\b) must be ignore to verify and it should return any characters is possible. Do you have any idea for creating this function? PS. I know it easy to create specified function like numeric only for allowing only digit characters. But I need share/reuse same piece of code both data tier(contains all model validator) and UI tier without modify anything. Thanks

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• how to show all added items into another activity, like: AddtoCart and ViewCart Functionality

  - by Stanley

  i am trying to make a shopping cart app, allowing user to choose category then select item to purchase, once user will click on any item to purchase, then showing that selected item into another activity with item image, name, cost, qty (to accept by user) and also providing add to cart functionality, now i want whenever user will click on Add to Cart button, then selected item need to show in ViewCart Activity, so here i am placing my AddtoCart Activity code, please tell me what i need to write to show added item(s) into ViewCart Category just like in shopping cart, In ViewCart activity i just want to show item title, cost and qty (entered by user):- public class AddtoCart extends Activity{ static final String KEY_TITLE = "title"; static final String KEY_COST = "cost"; static final String KEY_THUMB_URL = "imageUri"; @Override public void onCreate(Bundle savedInstanceState) { super.onCreate(savedInstanceState); setContentView(R.layout.single); Intent in = getIntent(); String title = in.getStringExtra(KEY_TITLE); String thumb_url = in.getStringExtra(KEY_THUMB_URL); String cost = in.getStringExtra(KEY_COST); ImageLoader imageLoader = new ImageLoader(getApplicationContext()); ImageView imgv = (ImageView) findViewById(R.id.single_thumb); TextView txttitle = (TextView) findViewById(R.id.single_title); TextView txtcost = (TextView) findViewById(R.id.single_cost); txttitle.setText(title); txtcost.setText(cost); imageLoader.DisplayImage(thumb_url, imgv); // Save a reference to the quantity edit text final EditText editTextQuantity = (EditText) findViewById(R.id.edit_qty); ImageButton addToCartButton = (ImageButton) findViewById(R.id.img_add); addToCartButton.setOnClickListener(new OnClickListener() { public void onClick(View v) { // Check to see that a valid quantity was entered int quantity = 0; try { quantity = Integer.parseInt(editTextQuantity.getText() .toString()); if (quantity <= 0) { Toast.makeText(getBaseContext(), "Please enter a quantity of 1 or higher", Toast.LENGTH_SHORT).show(); return; } } catch (Exception e) { Toast.makeText(getBaseContext(), "Please enter a numeric quantity", Toast.LENGTH_SHORT).show(); return; } // Close the activity finish(); } }); }}

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• convert SQL Server StoredPorcedure to MySql

  - by karthik

  I need to covert the following SP of SQL Server To MySql. I am new to MySql.. Help needed. CREATE PROC InsertGenerator (@tableName varchar(100)) as --Declare a cursor to retrieve column specific information --for the specified table DECLARE cursCol CURSOR FAST_FORWARD FOR SELECT column_name,data_type FROM information_schema.columns WHERE table_name = @tableName OPEN cursCol DECLARE @string nvarchar(3000) --for storing the first half --of INSERT statement DECLARE @stringData nvarchar(3000) --for storing the data --(VALUES) related statement DECLARE @dataType nvarchar(1000) --data types returned --for respective columns SET @string='INSERT '+@tableName+'(' SET @stringData='' DECLARE @colName nvarchar(50) FETCH NEXT FROM cursCol INTO @colName,@dataType IF @@fetch_status<>0 begin print 'Table '+@tableName+' not found, processing skipped.' close curscol deallocate curscol return END WHILE @@FETCH_STATUS=0 BEGIN IF @dataType in ('varchar','char','nchar','nvarchar') BEGIN SET @stringData=@stringData+'''''''''+ isnull('+@colName+','''')+'''''',''+' END ELSE if @dataType in ('text','ntext') --if the datatype --is text or something else BEGIN SET @stringData=@stringData+'''''''''+ isnull(cast('+@colName+' as varchar(2000)),'''')+'''''',''+' END ELSE IF @dataType = 'money' --because money doesn't get converted --from varchar implicitly BEGIN SET @stringData=@stringData+'''convert(money,''''''+ isnull(cast('+@colName+' as varchar(200)),''0.0000'')+''''''),''+' END ELSE IF @dataType='datetime' BEGIN SET @stringData=@stringData+'''convert(datetime,''''''+ isnull(cast('+@colName+' as varchar(200)),''0'')+''''''),''+' END ELSE IF @dataType='image' BEGIN SET @stringData=@stringData+'''''''''+ isnull(cast(convert(varbinary,'+@colName+') as varchar(6)),''0'')+'''''',''+' END ELSE --presuming the data type is int,bit,numeric,decimal BEGIN SET @stringData=@stringData+'''''''''+ isnull(cast('+@colName+' as varchar(200)),''0'')+'''''',''+' END SET @string=@string+@colName+',' FETCH NEXT FROM cursCol INTO @colName,@dataType END

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• Suitable data structures for saving files in localStorage (HTML5) ?

  - by WmasterJ

  It is nice when there isn't a DB to maintain and users to authenticate. My professor has asked me to convert a recent research project of his that uses Bespin and calculates errors made by users in a code editor as part of his research. The goal is to convert from MySQL to using HTML5 localStorage completely. Doesn't seem so hard to do, even though digging in his code might take some time. Question: I need to store files and state (last placement of cursor and active file). I have already done so by implementing the recommendations in another stackoverflow thread. But would like your input considering how to structure the content to use. My current solution Hashmap like solution with javascript objects: files = {}; // later, saving files[fileName] = data; And then storing in localStorage using some recommendations localStorage.setObject("files", files); // Note that setObject(key, data) does not exist but is added // using Storage.prototype.setObject = function() {... Currently I'm also considering using some type of numeric id. So that names can be changed without any hassle renaming the key in the hashmap. What is your opinion on the way it is solved and would you do it any differently?

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• JPA - Can an @JoinColumn be an @Id as well? SerializationException occurs.

  - by Shivago

  Hi everyone, I am trying to use an @JoinColumn as an @Id using JPA and I am getting SerializationExceptions, "Could not serialize." UserRole.java: @Entity @Table(name = "authorities") public class UserRole implements Serializable { @Column(name = "authority") private String role; @Id @ManyToOne @JoinColumn(name = "username") private User owner; ... } User.java: @Entity @Table(name = "users") public class User implements Serializable { @Id @GeneratedValue protected Long id; @Column(name = "username") protected String email; @OneToMany(mappedBy = "owner", fetch = FetchType.LAZY, cascade = CascadeType.ALL) protected Set<UserRole> roles = new HashSet<UserRole>(); .... } "username" is set up as a unique index in my Users table but not as the primary key. Is there any way to make "username" act as the ID for UserRole? I don't want to introduce a numeric key in UserRole. Have I totally lost the plot here? I am using MySQL and Hibernate under the hood.

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• SQL query error while trying to put a file in the database

  - by DaGhostman Dimitrov

  Hey Guys I have a big problem that I have no Idea why.. I have few forms that upload files to the database, all of them work fine except one.. I use the same query in all(simple insert). I think that it has something to do with the files i am trying to upload but I am not sure. Here is the code: if ($_POST['action'] == 'hndlDocs') { $ref = $_POST['reference']; // Numeric value of $doc = file_get_contents($_FILES['doc']['tmp_name']); $link = mysqli_connect('localhost','XXXXX','XXXXX','documents'); mysqli_query($link,"SET autocommit = 0"); $query = "INSERT INTO documents ({$ref}, '{$doc}', '{$_FILES['doc']['type']}') ;"; mysqli_query($link,$query); if (mysqli_error($link)) { var_dump(mysqli_error($link)); mysqli_rollback($link); } else { print("<script> window.history.back(); </script>"); mysqli_commit($link); } } The database has only these fields: DATABASE documents ( reference INT(5) NOT NULL, //it is unsigned zerofill doc LONGBLOB NOT NULL, //this should contain the binary data mime_type TEXT NOT NULL // the mime type of the file php allows only application/pdf and image/jpeg ); And the error I get is : You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near '00001, '????' at line 1 I will appreciate every help. Cheers!

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• R optimization: How can I avoid a for loop in this situation?

  - by chrisamiller

  I'm trying to do a simple genomic track intersection in R, and running into major performance problems, probably related to my use of for loops. In this situation, I have pre-defined windows at intervals of 100bp and I'm trying to calculate how much of each window is covered by the annotations in mylist. Graphically, it looks something like this: 0 100 200 300 400 500 600 windows: |-----|-----|-----|-----|-----|-----| mylist: |-| |-----------| So I wrote some code to do just that, but it's fairly slow and has become a bottleneck in my code: ##window for each 100-bp segment windows <- numeric(6) ##second track mylist = vector("list") mylist[[1]] = c(1,20) mylist[[2]] = c(120,320) ##do the intersection for(i in 1:length(mylist)){ st <- floor(mylist[[i]][1]/100)+1 sp <- floor(mylist[[i]][2]/100)+1 for(j in st:sp){ b <- max((j-1)*100, mylist[[i]][1]) e <- min(j*100, mylist[[i]][2]) windows[j] <- windows[j] + e - b + 1 } } print(windows) [1] 20 81 101 21 0 0 Naturally, this is being used on data sets that are much larger than the example I provide here. Through some profiling, I can see that the bottleneck is in the for loops, but my clumsy attempt to vectorize it using *apply functions resulted in code that runs an order of magnitude more slowly. I suppose I could write something in C, but I'd like to avoid that if possible. Can anyone suggest another approach that will speed this calculation up?

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• c# warn if text box is empty or contains a non-whole number

  - by Jamaul Smith

  In my specific case, I need the value in propertyPriceTextBox to be numeric only, and a whole number. A value also has to be entered, and I can just Messagebox.Show() a warning and that's all I'd need to do. This is what I have so far. private void computeButton_Click(object sender, EventArgs e) { decimal propertyPrice; if ((decimal.TryParse(propertyPriceTextBox.Text, out propertyPrice))) decimal.Parse(propertyPriceTextBox.Text); { if (residentialRadioButton.Checked == true) commisionLabel.Text = (residentialCom * propertyPrice).ToString("c"); if (commercialRadioButton.Checked == true) commisionLabel.Text = (commercialCom * propertyPrice).ToString("c"); if (hillsRadioButton.Checked == true) countySalesTaxTextBox.Text = ( hilssTax * propertyPrice).ToString("c"); if (pascoRadioButton.Checked == true) countySalesTaxTextBox.Text = (pascoTax * propertyPrice).ToString("c"); if (polkRadioButton.Checked == true) countySalesTaxTextBox.Text = (polkTax * propertyPrice).ToString("c"); decimal result; result = (countySalesTaxTextBox.Text + stateSalesTaxTextBox.Text + propertyPriceTextBox.Text + comissionTextBox.Text).ToString("c"); } else (.) MessageBox.Show("Property Price must be a whole number."); }

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• transferring binary files between systems

  - by tim

  Hi guys I'm trying to transfer my files between 2 UNIX clusters, the data is pure numeric (vectors of double) in binary form. Unfortunately one of the systems is IBM ppc997 and the other is AMD Opteron, It seems the format of binary numbers in these systems are different. I have tried 3 ways till now: 1- Changed my files to ASCII format (i.e. saved a number at each line in a text file), sent them to the destination and changed them again to binary on the target system (they both are UNIX, no end of line character difference??!) 2- Sent pure binaries to the destination 3- used uuencode sent them to the destination and decoded them Unfortunately any of these methods does not work (my code in the destination system generates garbage, while it works on the first system, I'm 100% sure the code itself is portable). I don't know what else I can do? Do you have any idea? I'm not a professional, please don't use computer scientists terminology! And: my codes are in C, so by binary I mean a one to one mapping between memory and hard disk. Thanks

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• Choropleth mapping issue in R

  - by chasec

  I am trying to follow the tutorial described here: http://www.thisisthegreenroom.com/2009/choropleths-in-r/ The below code executes, but it is either not matching my dataset with the maps_counties data properly, or it isn't plotting it in the order I would expect. For example, the resulting areas for the greater NYC area show no density while random counties in PA show the highest density. The general format of my data table is: county state count fairfield connecticut 17 hartford connecticut 6 litchfield connecticut 3 new haven connecticut 12 ... ... westchester new york 70 yates new york 1 luzerne pennsylvania 1 Note this data is in order by state and then county and includes data for CT, NJ, NY, & PA. First, I read in my data set: library(maps) library(RColorBrewer) d <- read.table("gissum.txt", sep="\t", header=TRUE) #Concatenate state and county info to match maps library d$stcon <- paste(d$state, d$county, sep=",") #Color bins colors = brewer.pal(5, "PuBu") d$colorBuckets <- as.factor(as.numeric(cut(d$count,c(0,10,20,30,40,50,300)))) Here is my matching mapnames <- map("county",plot=FALSE)[4]$names colorsmatched <- d$colorBuckets [na.omit(match(mapnames ,d$stcon))] Plotting: map("county" ,c("new york","new jersey", "connecticut", "pennsylvania") ,col = colors[d$colorBuckets[na.omit(match(mapnames ,d$stcon))]] ,fill = TRUE ,resolution = 0 ,lty = 0 ,lwd= 0.5 ) map("state" ,c("new york","new jersey", "connecticut", "pennsylvania") ,col = "black" ,fill=FALSE ,add=TRUE ,lty=1 ,lwd=2 ) map("county" ,c("new york","new jersey", "connecticut", "pennsylvania") ,col = "black" ,fill=FALSE ,add=TRUE , lty=1 , lwd=.5 ) title(main="Respondent Home ZIP Codes by County") I am sure I am missing something basic re: the order in which the maps function plots items - but I can't seem to figure it out. Thanks for the help. Please let me know if you need any more information.

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• Fixing an SQL where statement that is ugly and confusing

  - by Mike Wills

  I am directly querying the back-end MS SQL Server for a software package. The key field (vehicle number) is defined as alpha though we are entering numeric value in the field. There is only one exception to this, we place an "R" before the number when the vehicle is being retired (which means we sold it or the vehicle is junked). Assuming the users do this right, we should not run into a problem using this method. (Right or wrong isn't the issue here) Fast forward to now. I am trying to query a subset of these vehicle numbers (800 - 899) for some special processing. By doing a range of '800' to '899' we also get 80, 81, etc. If I cast the vehicle number into an INT, I should be able to get the right range. Except that these "R" vehicles are kicking me in the butt now. I have tried where vehicleId not like 'R%' and cast(vehicleId as int) between 800 and 899 however, I get a casting error on one of these "R" vehicles. What does work is where vehicleId not between '800' and '899' and cast(vehicleId as int) between 800 and 899', but I feel there has to be a better way and less confusing way. I have also tried other variations with HAVING and a sub-query all producing a casting error.

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