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  • Java Collection performance question

    - by Shervin
    I have created a method that takes two Collection<String> as input and copies one to the other. However, I am not sure if I should check if the collections contain the same elements before I start copying, or if I should just copy regardless. This is the method: /** * Copies from one collection to the other. Does not allow empty string. * Removes duplicates. * Clears the too Collection first * @param target * @param dest */ public static void copyStringCollectionAndRemoveDuplicates(Collection<String> target, Collection<String> dest) { if(target == null || dest == null) return; //Is this faster to do? Or should I just comment this block out if(target.containsAll(dest)) return; dest.clear(); Set<String> uniqueSet = new LinkedHashSet<String>(target.size()); for(String f : target) if(!"".equals(f)) uniqueSet.add(f); dest.addAll(uniqueSet); } Maybe it is faster to just remove the if(target.containsAll(dest)) return; Because this method will iterate over the entire collection anyways.

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  • ASP.NET web form Routing issue via UNC Path

    - by Slash
    I create a IIS 7.0 website via UNC path to load .aspx to dynamic compile files and runs. however, it's running perfect. I always use IIS URL Rewrite module 2 to rewrite my site URL n' its perfect, too. Today, I wanna use System.Web.Routing to implement url rewrite but I encountered difficulties... When I wrote code in Global.asax: System.Web.Routing.RouteTable.Routes.MapPageRoute("TEST", "AAA/{prop}", "~/BBB/CCC.aspx"); And it just CANNOT reDirect to /BBB/CCC.aspx When I type the URL(like: xx.xx.xx.xx/BBB/CCC.aspx) in browser directly, it runs normally that I want. (so it proof CCC.aspx is in right path.) thus, I copy all of the code and open VS2010 running with IIS 7.5 Express locally, it works perfect! e.g: in browser URL I type xx.xx.xx.xx/AAA/1234, it will turn to page xx.xx.xx.xx/BBB/CCC.aspx (Works perfect!) Why??? help me plz. thanks. Update: I think I should consider not UNC path to make it error! when I move all code to physical disk and setup IIS 7.0 to monitor this Folder, it still not works! But the same code run in VS2010 + IIS 7.5 Express it works!? so strange!

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  • How would you start automating my job?

    - by Jurily
    At my new job, we sell imported stuff. In order to be able to sell said stuff, currently the following things need to happen for every incoming shipment: Invoice arrives, in the form of an email attachment, Excel spreadsheet Monkey opens invoice, copy-pastes the relevant part of three columns into the relevant parts of a spreadsheet template, where extremely complex calculations happen, like =B2*550 Monkey sends this new spreadsheet to boss (email if lucky, printer otherwise), who sets the retail price Monkey opens the reply, then proceeds to input the data into the production database using a client program that is unusable on so many levels it's not even worth detailing Monkey fires up HyperTerminal, types in "AT", disconnect Monkey sends text messages and emails to customers using another part of the horrible client program, one at a time I want to change Monkey from myself to software wherever possible. I've never written anything that interfaces with email, Excel, databases or SMS before, but I'd be more than happy to learn if it saves me from this. Here's my uneducated wishlist: Monkey asks Thunderbird (mail server perhaps?) for the attachment Monkey tells Excel to dump the spreadsheet into a more Jurily-friendly format, like CSV or something Monkey parses the output, does the complex calculations // TODO: find a way to get the boss-generated prices with minimal manual labor involved Monkey connects to the database, inserts data Monkey spams costumers Is all this feasible? If yes, where do I start reading? How would you improve it? What language/framework do you think would be ideal for this? What would you do about the boss?

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  • How to pass data to a C++0x lambda function that will run in a different thread?

    - by Dimitri C.
    In our company we've written a library function to call a function asynchronously in a separate thread. It works using a combination of inheritance and template magic. The client code looks as follows: DemoThread thread; std::string stringToPassByValue = "The string to pass by value"; AsyncCall(thread, &DemoThread::SomeFunction, stringToPassByValue); Since the introduction of lambda functions I'd like to use it in combination with lambda functions. I'd like to write the following client code: DemoThread thread; std::string stringToPassByValue = "The string to pass by value"; AsyncCall(thread, [=]() { const std::string someCopy = stringToPassByValue; }); Now, with the Visual C++ 2010 this code doesn't work. What happens is that the stringToPassByValue is not copied. Instead the "capture by value" feature passes the data by reference. The result is that if the function is executed after stringToPassByValue has gone out of scope, the application crashes as its destructor is called already. So I wonder: is it possible to pass data to a lambda function as a copy? Note: One possible solution would be to modify our framework to pass the data in the lambda parameter declaration list, as follows: DemoThread thread; std::string stringToPassByValue = "The string to pass by value"; AsyncCall(thread, [=](const std::string stringPassedByValue) { const std::string someCopy = stringPassedByValue; } , stringToPassByValue); However, this solution is so verbose that our original function pointer solution is both shorter and easier to read. Update: The full implementation of AsyncCall is too big to post here. In short, what happens is that the AsyncCall template function instantiates a template class holding the lambda function. This class is derived from a base class that contains a virtual Execute() function, and upon an AsyncCall() call, the function call class is put on a call queue. A different thread then executes the queued calls by calling the virtual Execute() function, which is polymorphically dispatched to the template class which then executes the lambda function.

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  • Java conditional compilation: how to prevent code chunks to be compiled?

    - by khachik
    My project requires Java 1.6 for compilation and running. Now I have a requirement to make it working with Java 1.5 (from the marketing side). I want to replace method body (return type and arguments remain the same) to make it compiling with Java 1.5 without errors. Details: I have an utility class called OS which encapsulates all OS-specific things. It has a method public static void openFile(java.io.File file) throws java.io.IOException { // open the file using java.awt.Desktop ... } to open files like with double-click (start Windows command or open Mac OS X command equivalent). Since it cannot be compiled with Java 1.5, I want to exclude it during compilation and replace by another method which calls run32dll for Windows or open for Mac OS X using Runtime.exec. Question: How can I do that? Can annotations help here? Note: I use ant, and I can make two java files OS4J5.java and OS4J6.java which will contain the OS class with the desired code for Java 1.5 and 1.6 and copy one of them to OS.java before compiling (or an ugly way - replace the content of OS.java conditionally depending on java version) but I don't want to do that, if there is another way. Elaborating more: in C I could use ifdef, ifndef, in Python there is no compilation and I could check a feature using hasattr or something else, in Common Lisp I could use #+feature. Is there something similar for Java? Found this post but it doesn't seem to be helpful. Any help is greatly appreciated. kh.

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  • Would an immutable keyword in Java be a good idea?

    - by berry120
    Generally speaking, the more I use immutable objects in Java the more I'm thinking they're a great idea. They've got lots of advantages from automatically being thread-safe to not needing to worry about cloning or copy constructors. This has got me thinking, would an "immutable" keyword go amiss? Obviously there's the disadvantages with adding another reserved word to the language, and I doubt it will actually happen primarily for the above reason - but ignoring that I can't really see many disadvantages. At present great care has to be taken to make sure objects are immutable, and even then a dodgy javadoc comment claiming a component object is immutable when it's in fact not can wreck the whole thing. There's also the argument that even basic objects like string aren't truly immutable because they're easily vunerable to reflection attacks. If we had an immutable keyword the compiler could surely recursively check and give an iron clad guarantee that all instances of a class were immutable, something that can't presently be done. Especially with concurrency becoming more and more used, I personally think it'd be good to add a keyword to this effect. But are there any disadvantages or implementation details I'm missing that makes this a bad idea?

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  • Fast, Unicode-capable, cross-platform programmer's text editor that shows invisibles like ZWSP?

    - by Roger_S
    Our publishing workflow includes Windows and Linux machines (there are some Macs too, but not in the critical-path workflow). Many texts include both English and Khmer and are marked-up in XML. XML Copy Editor is the best cross-platform open-source XML editor I've discovered. It utilizes the Scintilla editing component, which is generally good with Unicode but which does not enable non-printing or invisible characters like U+200B (zero-width space) and U+200C (zero-width non-joiner) to be displayed. Khmer does not separate words with a space character as Western languages do, so ZWSP is used in electronic texts to enable applications to break lines easily. Ideally I'd edit the markup and the content in a single editor, but XML awareness is less important at times than being able to display invisibles. (OpenOffice.org Writer and Microsoft Word are the only two apps I know that will display ZWSP. They are not suitable for the markup and text manipulations that need to be done to prepare manuscripts for publication, unfortunately, although I guess they're fine for authoring.) I tried out a promising editor last week, but a search-and-replace regex operation that took under a second in TextPad 4.7.3 lasted over twenty seconds. So I want to mention that speed and the ability to handle large (up to 150mb) files is also a concern. Is there a good, fast, free or not too expensive text editor, with versions on Windows and Linux and maybe mac too, Unicode-aware and capable of displaying invisibles like ZWSP? That has syntax highlighting, can handle large files and is customizable enough that I won't tear my hair out in frustration? Thanks, Roger_S

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  • asp.net C# windows authentication iss config

    - by user1566209
    I'm developing a webpage where a need to know the users windows authentication values, more precisely the name. Others developments have been done with this kind of authentication but sadly for me their creators are long gone and i have no contact or documentation. I'm using Visual Studio 2008 and i'm accessing a webservice that is in a remote server. The server is a windows server 2008 r2 standard and is using ISS version 7.5. Since i have the source code of the other developments what i did was copy paste and was working fine when i was calling the webservice that was in my machine (localhost). The code is the following: //1st way WindowsPrincipal wp = new WindowsPrincipal(WindowsIdentity.GetCurrent()); string strUser = wp.Identity.Name;//ALWAYS GET NT AUTHORITY\NETWORK SERVICE //2nd way WindowsIdentity winId = WindowsIdentity.GetCurrent(); WindowsPrincipal winPrincipal = new WindowsPrincipal(winId); string user = winPrincipal.Identity.Name;//ALWAYS GET NT AUTHORITY\NETWORK SERVICE //3rd way IIdentity WinId = HttpContext.Current.User.Identity; WindowsIdentity wi = (WindowsIdentity)WinId; string userstr = wi.Name; //ALWAYS GET string empty btn_select.Text = userstr; btn_cancelar.Text = strUser; btn_gravar.Text = user; As you can see i have here 3 ways to get the same and in a sad manner show my user's name. As for my web.config i have: <authentication mode="Windows"/> <identity impersonate="true" /> In the IIS manager i have tried lots of combination of enable and disable between Anonymous Authentication, ASP.NET Impersonation, Basic Authentication, Forms Authentication and Windows Authentication. Can please someone help me?? NOTE: The respective values i get from each try are in the code

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  • How to accept confirmation Automatically in PowerShell for Outlook

    - by user2919845
    How to accept confirmation Automatically in PowerShell for Outlook I have script for Export attachments from email from Outlook - see next It works correctly on one PC, but on another PC is there a problem: Outlook gives message and wants answer: Permit Denny Help If I manually click on Permit or Denny it works correctly. I want to automate it. Can you give me some suggestion how to do it in PowerShell? I have tried to set Outlook to not give this message but I didn’t success. My script: # <-- Script ---------> # script works with outlook Inbox folder # check if email have attachments with ".txt" and save those attachments to $filepath # path for exported files - attachments $filepath = "d:\Exported_files\" # create object outlook $o = New-Object -comobject outlook.application $n = $o.GetNamespace("MAPI") # $f - folder „dorucena posta“ 6 - Inbox $f = $n.GetDefaultFolder(6) # 6 - Inbox # select newest 10 emails, from it olny this one with attachments $f.Items| select -last 10| Where {$_.Attachments}| foreach { # process only unreaded mail if($_.unread -eq $True) { # processed mail set as read, not to process this mail again next day $_.unread = $False $SenderName = $_.SenderName Write-Host "Email from: ", $SenderName # process all attachments $_.attachments|foreach { $a = $_.filename If ($a.Contains(".txt")) { Write-Host $SenderName," ", $a # copy *.txt attachments to folder $filepath $_.saveasfile((Join-Path $filepath "$a")) } } } } Write-Host "Finish" # <------ End Script ---------------------------------->

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  • Git and cloning

    - by jriff
    Hi all! I have done an app for a client called 'A' (not really). I have found out that it is very cool and that I want to sell it to other clients also. The directory 'A' is a Git repository. I think I have a problem with cloning it. As far as I can see I need to make a copy of the dir 'A' and call it 'Generic_A'. Then delete the dir 'A' and do a "git clone Generic_A A" Then I could start changing the 'Generic_A'-repo with a generic design and all client references removed. But that is kind of the other way around. I should have started doing the generic design and then cloned the repo to change to the client specific design. Can I: make a new branch do all the changes to make the design generic create a patch that reflects the changes between the two remove the client specific branch rename the directory to 'Generic_A' clone the repo to a new dir 'A' apply the patch to get the client specific stuff back And if yes - how do I make the patch and apply it? Regards, Jacob

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  • Simple App Engine Sessions Implementation

    - by raz0r
    Here is a very basic class for handling sessions on App Engine: """Lightweight implementation of cookie-based sessions for Google App Engine. Classes: Session """ import os import random import Cookie from google.appengine.api import memcache _COOKIE_NAME = 'app-sid' _COOKIE_PATH = '/' _SESSION_EXPIRE_TIME = 180 * 60 class Session(object): """Cookie-based session implementation using Memcached.""" def __init__(self): self.sid = None self.key = None self.session = None cookie_str = os.environ.get('HTTP_COOKIE', '') self.cookie = Cookie.SimpleCookie() self.cookie.load(cookie_str) if self.cookie.get(_COOKIE_NAME): self.sid = self.cookie[_COOKIE_NAME].value self.key = 'session-' + self.sid self.session = memcache.get(self.key) if self.session: self._update_memcache() else: self.sid = str(random.random())[5:] + str(random.random())[5:] self.key = 'session-' + self.sid self.session = dict() memcache.add(self.key, self.session, _SESSION_EXPIRE_TIME) self.cookie[_COOKIE_NAME] = self.sid self.cookie[_COOKIE_NAME]['path'] = _COOKIE_PATH print self.cookie def __len__(self): return len(self.session) def __getitem__(self, key): if key in self.session: return self.session[key] raise KeyError(str(key)) def __setitem__(self, key, value): self.session[key] = value self._update_memcache() def __delitem__(self, key): if key in self.session: del self.session[key] self._update_memcache() return None raise KeyError(str(key)) def __contains__(self, item): try: i = self.__getitem__(item) except KeyError: return False return True def _update_memcache(self): memcache.replace(self.key, self.session, _SESSION_EXPIRE_TIME) I would like some advices on how to improve the code for better security. Note: In the production version it will also save a copy of the session in the datastore. Note': I know there are much more complete implementations available online though I would like to learn more about this subject so please don't answer the question with "use that" or "use the other" library.

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  • Update table without using cursor and on date

    - by Muhammad Kashif Nadeem
    Please copy and run following script DECLARE @Customers TABLE (CustomerId INT) DECLARE @Orders TABLE ( OrderId INT, CustomerId INT, OrderDate DATETIME ) DECLARE @Calls TABLE (CallId INT, CallTime DATETIME, CallToId INT, OrderId INT) ----------------------------------------------------------------- INSERT INTO @Customers SELECT 1 INSERT INTO @Customers SELECT 2 ----------------------------------------------------------------- INSERT INTO @Orders SELECT 10, 1, DATEADD(d, -20, GETDATE()) INSERT INTO @Orders SELECT 11, 1, DATEADD(d, -10, GETDATE()) ----------------------------------------------------------------- INSERT INTO @Calls SELECT 101, DATEADD(d, -19, GETDATE()), 1, NULL INSERT INTO @Calls SELECT 102, DATEADD(d, -17, GETDATE()), 1, NULL INSERT INTO @Calls SELECT 103, DATEADD(d, -9, GETDATE()), 1, NULL INSERT INTO @Calls SELECT 104, DATEADD(d, -6, GETDATE()), 1, NULL INSERT INTO @Calls SELECT 105, DATEADD(d, -5, GETDATE()), 1, NULL ----------------------------------------------------------------- I want to update @Calls table and need following results. I am using the following query UPDATE @Calls SET OrderId = ( CASE WHEN (s.CallTime > e.OrderDate) THEN e.OrderId END ) FROM @Calls s INNER JOIN @Orders e ON s.CallToId = e.CustomerId and the result of my query is not what I need. Requirement: As you can see there are two orders. One is on 2010-12-12 and one is on 2010-12-22. I want to update @Calls table with relevant OrderId with respect to CallTime. In short If subsequent Orders are added, and there are further calls then we assume that a new call is associated with the most recent Order Note: This is sample data so this is not the case that I always have two Orders. There might be 10+ Orders and 100+ calls. Note2 I could not find good title for this question. Please change it if you think of any better. Thanks.

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  • Access denied from another thread

    - by Lobuno
    Hello! In a program I span a thread ("the working thread"). Hera I copy some files write some data to a database and eventually, delete some other files or directories. Everything works fine. The problem is now, that I decided to move the deleting operation to some other thread. So the working thread now copies the files or directories, writes to the database, and , if there is a need to delete some other files this thread spans another thread and that second thread deleted the needed files or directories. The problem is that,the deletion used to work 100% when done in the working thread, now when the same is done in the secondary thread, I sometimes get an "Access denied" error and the files cannot be deleted. And no, the working thread is definitely NOT acceding the files and directories to delete at this moment. Sometimes (but not always) the main thread is impersonating some user, so if needed , the deleting thread is also running under impersonation just to grant the needed permissions to delete the files, so that should not be the problem. Anybody has a clue why this could be happening?

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  • Extremely CPU Intensive Alarm Clock

    - by SoulBeaver
    For some reason my program, a console alarm clock I made for laughs and practice, is extremely CPU intensive. It consumes about 2mB RAM, which is already quite a bit for such a small program, but it devastates my CPU with over 50% resources at times. Most of the time my program is doing nothing except counting down the seconds, so I guess this part of my program is the one that's causing so much strain on my CPU, though I don't know why. If it is so, could you please recommend a way of making it less, or perhaps a library to use instead if the problem can't be easily solved? /* The wait function waits exactly one second before returning to the * * called function. */ void wait( const int &seconds ) { clock_t endwait; // Type needed to compare with clock() endwait = clock() + ( seconds * CLOCKS_PER_SEC ); while( clock() < endwait ) {} // Nothing need be done here. } In case anybody browses CPlusPlus.com, this is a genuine copy/paste of the clock() function they have written as an example for clock(). Much why the comment //Nothing need be done here is so lackluster. I'm not entirely sure what exactly clock() does yet. The rest of the program calls two other functions that only activate every sixty seconds, otherwise returning to the caller and counting down another second, so I don't think that's too CPU intensive- though I wouldn't know, this is my first attempt at optimizing code. The first function is a console clear using system("cls") which, I know, is really, really slow and not a good idea. I will be changing that post-haste, but, since it only activates every 60 seconds and there is a noticeable lag-spike, I know this isn't the problem most of the time. The second function re-writes the content of the screen with the updated remaining time also only every sixty seconds. I will edit in the function that calls wait, clearScreen and display if it's clear that this function is not the problem. I already tried to reference most variables so they are not copied, as well as avoid endl as I heard that it's a little slow compared to \n.

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  • CFfile -- value is not set to the queried data

    - by user494901
    I have this add user form, it also doubles as a edit user form by querying the data and setting the value="#query.xvalue#". If the user exists (eg, you're editing a user, it loads in the users data from the database. When doing this on the <cffile field it does not load in the data, then when the insert goes to insert data it overrights the database values with a blank string (If a user does not input a new file). How do I avoid this? Code: Form: <br/>Digital Copy<br/> <!--- If null, set a default if not, set the default to database default ---> <cfif len(Trim(certificationsList.cprAdultImage)) EQ 0> <cfinput type="file" required="no" name="cprAdultImage" value="" > <cfelse> File Exists: <cfoutput><a href="#certificationsList.cprAdultImage#">View File</a></cfoutput> <cfinput type="file" required="no" name="cprAdultImage" value="#certificationsList.cprAdultImage#"> </cfif> Form Processor: <!--- Has a file been specificed? ---> <cfif not len(Trim(form.cprAdultImage)) EQ 0> <cffile action="upload" filefield="cprAdultImage" destination="#destination#" nameConflict="makeUnique"> <cfinvokeargument name="cprAdultImage" value="#pathOfFile##cffile.serverFile#"> <cfelse> <cfinvokeargument name="cprAdultImage" value=""> </cfif> CFC ARGS: <cfargument name="cprAdultExp" required="NO"> <cfargument name="cprAdultCompany" type="string" required="no"> <cfargument name="cprAdultImage" type="string" required="no"> <cfargument name="cprAdultOnFile" type="boolean" required="no"> Query: UPDATE mod_StudentCertifications SET cprAdultExp='#DateFormat(ARGUMENTS.cprAdultExp, "mm/dd/yyyy")#', cprAdultCompany='#Trim(ARGUMENTS.cprAdultCompany)#', cprAdultImage='#Trim(ARGUMENTS.cprAdultImage)#', cprAdultOnFile='#Trim(ARGUMENTS.cprAdultOnFile)#' INSERT INTO mod_StudentCertifications( cprAdultExp, cprAdultcompany, cprAdultImage, cprAdultOnFile

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  • Does XAML work with file links in Visual Studio?

    - by Tim
    I'm adding a new WPF project to an existing Visual Studio solution and would like to reuse a bunch of code (C# and xaml) from an existing project within the solution. I've created the new project and added existing files as follows: Right click project Add - Add Existing Item Find the file to reuse, use the arrow next to "Add" and "Add as Link" I now have a nice project set up with all the proper links. However, XAML chokes on these links. For example: <ResourceDictionary.MergedDictionaries> <ResourceDictionary Source="Resources\Elements\Buttons\Buttons.xaml" /> <ResourceDictionary Source="Resources\Elements\TextBox\TextBox.xaml" /> </ResourceDictionary.MergedDictionaries> The files "Buttons.xaml" and "TextBox.xaml" exist as links in my new project. The project builds, but when I run, I get the following XamlParseException: 'Resources\Elements\Buttons\Buttons.xaml' value cannot be assigned to property 'Source' of object 'System.Windows.ResourceDictionary'. Cannot locate resource 'resources/elements/buttons/buttons.xaml'. It seems like the XAML parser is requiring an actual copy of these XAML files to exist in my new project, instead of links. This is exactly what I'm trying to avoid. I want my project to share these files so that any changes get transferred to the other project without hunting and copying. Any insight is appreciated!

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  • Are certain open-source licenses more suitable than others for career growth?

    - by Francisco Garcia
    As a software engineer/programmer myself, I love the possibility to download the code and learn from it. However building software is what brings food to my table. I have doubts regarding the type of license I should use for my own personal projects or when picking up one project to learn from. There are already many questions about licenses on Stackoverflow, but I would like to make this one much more specific. If your main profession and way of living is building software: which type of license do you find more useful for you? And I mean, the license that can benefit you most as a professional because it gives you more freedom to reuse the experience you gain. GPL is a great license to build communities because it forces you to give back your work. However I like BSD licenses because of their extra freedom. I know that if the code I am exploring is BSD licensed, I might be able to expand not only my skills, but also my programmer toolbox. Whenever I am working for a company, I might recall that something similar was done in another project and I will be able to copy or imitate certain part of the code. I know that there are religious wars regarding GPL vs BSD and it is not my intention to start one. Probably many companies already take snipsets from GPL projects anyway. I just want to insist in the factor of professional enrichment. I do not intend to discriminate any license. I said I prefer BSD licenses but I also use Linux because the user base is bigger and also the market demand.

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  • Modifying File while in use using Java

    - by Marquinio
    Hi all, I have this recurrent Java JAR program tasks that tries to modify a file every 60seconds. Problem is that if user is viewing the file than Java program will not be able to modify the file. I get the typical IOException. Anyone knows if there is a way in Java to modify a file currently in use? Or anyone knows what would be the best way to solve this problem? I was thinking of using the File canRead(), canWrite() methods to check if file is in use. If file is in use then I'm thinking of making a backup copy of data that could not be written. Then after 60 seconds add some logic to check if backup file is empty or not. If backup file is not empty then add its contents to main file. If empty then just add new data to main file. Of course, the first thing I will always do is check if file is in use. Thanks for all your ideas.

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  • Parse large XML file w/ script or use BioPython API ?

    - by jeremy04
    Hey guys this is my first question on here. I'm trying to make a local copy of the UniprotKB in SQL. The UniprotKB is 2.1GB, and it comes in XML and a special text format used by SwissProt Here are my options: 1) Use a SAX parser (XML) - I chose Ruby, and Nokogiri. I started writing the parser, but my initial reaction: how would I map the XML schema to the SAX parser? 2) BioPython - I already have BioSQL/Biopython installed, which literally created my SQL schema for me, and I was able to successfully insert one SwissProt/Uniprot txt file into the database. I'm running it right now (crosses fingers) on the entire 2.1gb. Here is the code I'm running: from Bio import SeqIO from BioSQL import BioSeqDatabase from Bio import SwissProt server = BioSeqDatabase.open_database(driver = "MySQLdb", user = "root", passwd = "", host="localhost", db = "bioseqdb") db = server["uniprot"] iterator = SeqIO.parse(open("/path/to/uniprot_sprot.dat", "r"), "swiss") db.load(iterator) server.commit() Edit: it's now crashing because the transactions are getting locked (since the tables are Innodb) Error Number: 1205 Lock wait timeout exceeded; try restarting transaction. I'm using MySQL version: 5.1.43 Should I switch my database to Postgrelsql ?

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  • Some images fails to load on Windows Server 2008

    - by Guffa
    I have an application running on a Windows Server 2008, that is processing uploaded images. Currently it successfully processes about 8000 images per day, creating 11 different sizes of each image. The problem that I have is that sometimes the application fails to load some images, I get the error "System.Runtime.InteropServices.ExternalException: A generic error occurred in GDI+.". The upload only accepts files with a JPEG extension (jpg/jpeg/jpe) or with a JPEG MIME type, and from what I can tell those images are really JPEG images. If I look at the image file in windows explorer on the server, it can successfully extract the thumbnail from the file, but if I try to open it, I get the error message "This is not a valid bitmap file, or it's format is not currently supported." from Paint. If I copy the image to my own computer, running Windows 7, there is no problem opening the image. It works in Paint, Windows Photo Viewer, Adobe Bridge, and Photoshop. If I try to load the image using Image.FromStream the same way as in the application running on the server, it loads just fine. (I have copied the file back to the server, and it still doesn't work, so there is nothing in the copying process that changes it.) When I look at the image information in Bridge, I see that the images are created using Picasa 3.0, but other than that I can't see anything special about them. I haven't yet found anyone having the same problem, or any known problems like this with the Picasa application. Has anyone had any similar problem, or know if there is something special about images created using Picasa? Is there any image codec that needs installing on the server to handle all kinds of JPEG images?

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  • Creating a HTTP handler for IIS that transparently forwards request to different port?

    - by Lasse V. Karlsen
    I have a public web server with the following software installed: IIS7 on port 80 Subversion over apache on port 81 TeamCity over apache on port 82 Unfortunately, both Subversion and TeamCity comes with their own web server installations, and they work flawlessly, so I don't really want to try to move them all to run under IIS, if that is even possible. However, I was looking at IIS and I noticed the HTTP redirect part, and I was wondering... Would it be possible for me to create a HTTP handler, and install it on a sub-domain under IIS7, so that all requests to, say, http://svn.vkarlsen.no/anything/here is passed to my HTTP handler, which then subsequently creates a request to http://localhost:81/anything/here, retrieves the data, and passes it on to the original requestee? In other words, I would like IIS to handle transparent forwards to port 81 and 82, without using the redirection features. For instance, Subversion doesn't like HTTP redirect and just says that the repository has been moved, and I need to relocate my working copy. That's not what I want. If anyone thinks this can be done, does anyone have any links to topics I need to read up on? I think I can manage the actual request parts, even with authentication, but I have no idea how to create a HTTP handler. Also bear in mind that I need to handle sub-paths and documents beneath the top-level domain, so http://svn.vkarlsen.no/whatever/here needs to be handled by a single handler, I cannot create copies of the handler for all sub-directories since paths are created from time to time.

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  • Klazuka/Kal incorporation issue

    - by user1292943
    I'm having a little issue. I am trying to incorporate the Klazuka/Kal project into my project. I've done the following: I added the Kal.xcodeproj and all files to my project Under Build Phases, I've added Kal to "Target Dependencies" Under Build Phases, I've added libKal.a under "Link Binary With Libraries" Under Build Phases, I've added Kal.bundle to "Copy Bundle Resources" Under Build Settings, I've added "“$(BUILT_PRODUCTS_DIR)” (or “$(BUILT_PRODUCTS_DIR)/static_library_name”" for "Header Search Paths" and "User Header Search Paths". Under Build Settings, I've added the path to Kal under "Library Search Paths" Under Build Settings, I've added -ObjC, -all_load, and -force_load under "Other Linker Flags" I've edited my Build Scheme and list the Kal Target prior to my main application target with Analyze, Test, Run, Profile, and Archive all checked. I've attempted to follow the steps from here on Stack Overflow: iphone: Kal calendar not running in xcode 4.2 and here: Trying to integrate a Calendar library that was built for versions of iOS before iOS5 into my new project in XCode 4 using iOS5 - How to port? and here: I added my project and Kal Calendar's project in a workspace, still won't work in Xcode 4 and also on this site: http://blog.carbonfive.com/2011/04/04/using-open-source-static-libraries-in-xcode-4/#configuring_the_projects_scheme I try to import the "Kal.h" file but am getting a File Not Found error when I try to build. I'm obviously missing something, just not sure what. Can anyone please help? Thanks for any assistance!!

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  • How to make use of Grails Dependencies in your IDE

    - by raoulsson
    Hi All, So I finally got my dependencies working with Grails. Now, how can my IDE, eg IntelliJ or Eclipse, take advantage of it? Or do I really have to manually manage what classes my IDE knows about at "development time"? If the BuildConfig.groovy script is setup right (see here), you will be able to code away with vi or your favorite editor without any troubles, then run grails compile which will resolve and download the dependencies into the Ivy cache and off you go... If, however, you are using an IDE like Eclipse or IntelliJ, you will need the dependencies at hand while coding. Obviously - as these animals will need them for the "real time" error detection/compilation process. Now, while it is certainly possible to code with all the classes shining up in bright red all over the place that are unknown to your IDE, it is certainly not much fun... The Maven support or whatever it is officially called lives happily with the pom file, no extra "jar directory" pointers needed, at least in IntelliJ. I would like to be able to do the same with Grails dependencies. Currently I am defining them in the BuildConfig.groovy and additionally I copy/paste the current jars around on my local disk and let the IDE point to it. Not very satisfactory, as I am working in a highly volatile project module environment with respect to code change. And this situation ports me directly into "jar hell", as my "develop- and build-dependencies" easily get out of sync and I have to manage manually, that is, with my brain... And my brain should be busy with other stuff... Thanks! Raoul P.S: I'm currently using Grails 1.2M4 and IntelliJ 92.105. But feel free to add answers on future versions of Grails and different, future IDEs, as the come in...

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  • Force download working, but showing invalid when trying to open locally.

    - by Cody Robertson
    Hi, I wrote this function and everything works well till i try to open the downloaded copy and it shows that the file is invalid. Here is my function function download_file() { //Check for download request: if(isset($_GET['file'])) { //Make sure there is a file before doing anything if(is_file($this->path . basename($_GET['file']))) { //Below required for IE: if(ini_get('zlib.output_compression')) { ini_set('zlib.output_compression', 'Off'); } //Set Headers: header('Pragma: public'); header('Expires: 0'); header('Cache-Control: must-revalidate, post-check=0, pre-check=0'); header('Last-Modified: ' . gmdate('D, d M Y H:i:s', $this->path . basename($_GET['file'])) . ' GMT'); header('Content-Type: application/force-download'); header('Content-Disposition: inline; filename="' . basename($_GET['file']) . '"'); header('Content-Transfer-Encoding: binary'); header('Content-Length: ' . filesize($this->path . basename($_GET['file']))); header('Connection: close'); readfile($this->path . basename($_GET['file'])); exit(); } } }

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  • Deserialize xml which uses attribute name/value pairs

    - by Bodyloss
    My application receives a constant stream of xml files which are more or less a direct copy of the database record <record type="update"> <field name="id">987654321</field> <field name="user_id">4321</field> <field name="updated">2011-11-24 13:43:23</field> </record> And I need to deserialize this into a class which provides nullable property's for all columns class Record { public long? Id { get; set; } public long? UserId { get; set; } public DateTime? Updated { get; set; } } I just cant seem to work out a method of doing this without having to parse the xml file manually and switch on the field's name attribute to store the values. Is their a way this can be achieved quickly using an XmlSerializer? And if not is their a more efficient way of parsing it manually? Regards and thanks My main problem is that the attribute name needs to have its value set to a property name and its value as the contents of a <field>..</field> element

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