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  • How do I modify gitstats to only utilize a specified file extension for it's statistics?

    - by Fake Code Monkey Rashid
    Hello good people! The website of the statistics generator in question is: http://gitstats.sourceforge.net/ It's git repo can be cloned from: git clone git://repo.or.cz/gitstats.git What I want to do is something like: ./gitstatus --ext=".py" /input/foo /output/bar Failing being able to easily pass the above option without heavy modification, I'd just hardcore the file extentsion I want to be included. However, I'm unsure of the relevant section of code to modify and even if I did no, I'm unsure of how to start such modifications. It's seems like it'd be rather simple but alas...

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • mount command pid

    - by lakshmipathi
    Trying to mount a device and get the pid of mount command. cmd="/bin/mount /dev/sda1 /mnt" os.system(cmd) Now how to obtain the pid of mount command? There plenty of mounted device available on my system ,something like ps | grep mount won't work.

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  • add a decorate function to a class

    - by wiso
    I have a decorated function (simplified version): class Memoize: def __init__(self, function): self.function = function self.memoized = {} def __call__(self, *args, **kwds): hash = args try: return self.memoized[hash] except KeyError: self.memoized[hash] = self.function(*args) return self.memoized[hash] @Memoize def _DrawPlot(self, options): do something... now I want to add this method to a pre-esisting class. ROOT.TChain.DrawPlot = _DrawPlot when I call this method: chain = TChain() chain.DrawPlot(opts) I got: self.memoized[hash] = self.function(*args) TypeError: _DrawPlot() takes exactly 2 arguments (1 given) why doesn't it propagate self?

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  • why is this dictionary line number count not working?

    - by jad
    i have this piece of code the last bit of the code starting from d = {} im trying to print the words with its line number located in the text but it is not working its only printing the words anyone know why ??? need help ASAP import sys import string text = [] infile = open(sys.argv[1], 'r').read() for punct in string.punctuation: infile = infile.replace(punct, "") text = infile.split() dict = open(sys.argv[2], 'r').read() dictset = [] dictset = dict.split() words = [] words = list(set(text) - set(dictset)) words = [text.lower() for text in words] words.sort() d = {} counter = 0 for lines in text: counter += 1 if word not in d: d[words] = [counter] else: d[words.append[counter] print(word, d)

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  • Connecting slots and events in PyQt4 in a loop

    - by LukaD
    Im trying to build a calculator with PyQt4 and connecting the 'clicked()' signals from the buttons doesn't as expected. Im creating my buttons for the numbers inside a for loop where i try to connect them afterwards. def __init__(self): for i in range(0,10): self._numberButtons += [QPushButton(str(i), self)] self.connect(self._numberButtons[i], SIGNAL('clicked()'), lambda : self._number(i)) def _number(self, x): print(x) When I click on the buttons all of them print out '9'. Why is that so and how can i fix this?

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  • Removing the port number from URL

    - by DrewSSP
    I'm new to anything related to servers and am trying to deploy a django application. Today I bought a domain name for the app and am having trouble configuring it so that the base URL does not need the port number at the end of it. I have to type www.trackthecharts.com:8001 to see the website when I only want to use www.trackethecharts.com. I think the problem is somewhere in my nginx, gunicorn or supervisor configuration. gunicorn_config.py command = '/opt/myenv/bin/gunicorn' pythonpath = '/opt/myenv/top-chart-app/' bind = '162.243.76.202:8001' workers = 3 root@django-app:~# nginx config server { server_name 162.243.76.202; access_log off; location /static/ { alias /opt/myenv/static/; } location / { proxy_pass http://127.0.0.1:8001; proxy_set_header X-Forwarded-Host $server_name; proxy_set_header X-Real-IP $remote_addr; add_header P3P 'CP="ALL DSP COR PSAa PSDa OUR NOR ONL UNI COM NAV"'; } } supervisor config [program:top_chart_gunicorn] command=/opt/myenv/bin/gunicorn -c /opt/myenv/gunicorn_config.py djangoTopChartApp.wsgi autostart=true autorestart=true stderr_logfile=/var/log/supervisor_gunicorn.err.log stdout_logfile=/var/log/supervisor_gunicorn.out.log Thanks for taking a look.

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  • Reading path in templates

    - by DJPython
    Hello, is it any way to read path to current page? For example, I am at www.example.com/foo/bar/ - and I want to read '/foo/bar/'. But, all have to be done in template file without modyficating views. I have to many view files to edit each one. Sorry for my english, hope everyone understand. Cheers.

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  • Test assertions for tuples with floats

    - by Space_C0wb0y
    I have a function that returns a tuple that, among others, contains a float value. Usually I use assertAlmostEquals to compare those, but this does not work with tuples. Also, the tuple contains other data-types as well. Currently I am asserting every element of the tuple individually, but that gets too much for a list of such tuples. Is there any good way to write assertions for such cases?

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  • Can I get the amount of time for which a key is pressed on a keyboard

    - by Adi
    Dear all, I am working on a project in which I have to develop bio-passwords based on user's keystroke style. Suppose a user types a password for 20 times, his keystrokes are recorded, like holdtime : time for which a particular key is pressed. digraph time : time it takes to press a different key. suppose a user types a password " COMPUTER". I need to know the time for which every key is pressed. something like : holdtime for the above password is C-- 200ms O-- 130ms M-- 150ms P-- 175ms U-- 320ms T-- 230ms E-- 120ms R-- 300ms The rational behind this is , every user will have a different holdtime. Say a old person is typing the password, he will take more time then a student. And it will be unique to a particular person. To do this project, I need to record the time for each key pressed. I would greatly appreciate if anyone can guide me in how to get these times. Editing from here.. Language is not important, but I would prefer it in C. I am more interested in getting the dataset.

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  • differences between "d.clear()" and "d={}"

    - by Tshepang
    On my machine, the execution speed between "d.clear()" and "d={}" is over 100ns so am curious why one would use one over the other. import timeit def timing(): d = dict() if __name__=='__main__': t = timeit.Timer('timing()', 'from __main__ import timing') print t.repeat()

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  • passing self data into a recursive function

    - by user272689
    I'm trying to set a function to do something like this def __binaryTreeInsert(self, toInsert, currentNode=getRoot(), parentNode=None): where current node starts as root, and then we change it to a different node in the method and recursivly call it again. However, i cannot get the 'currentNode=getRoot()' to work. If i try calling the funcion getRoot() (as above) it says im not giving it all the required variables, but if i try to call self.getRoot() it complains that self is an undefined variable. Is there a way i can do this without having to specify the root while calling this method?

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  • How to clear wxpython frame content when dragging a panel?

    - by aF
    Hello, I have 3 panels and I want to make drags on them. The problem is that when I do a drag on one this happens: How can I refresh the frame to happear its color when the panel is no longer there? This is the code that I have to make the drag: def onMouseMove(self, event): (self.pointWidth, self.pointHeight) = event.GetPosition() (self.width, self.height) = self.GetSizeTuple() if (self.pointWidth>100 and self.pointWidth<(self.width-100) and self.pointHeight < 15) or self.parent.dragging: self.SetCursor(wx.StockCursor(wx.CURSOR_SIZING)) """implement dragging""" if not event.Dragging(): self.w = 0 self.h = 0 return self.CaptureMouse() if self.w == 0 and self.h == 0: (self.w, self.h) = event.GetPosition() else: (posw, posh) = event.GetPosition() displacement = self.h - posh self.SetPosition( self.GetPosition() - (0, displacement)) else: self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW)) def onDraggingDown(self, event): if self.pointWidth>100 and self.pointWidth<(self.width-100) and self.pointHeight < 15: self.parent.dragging = 1 self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW)) self.SetBackgroundColour('BLUE') self.parent.SetTransparent(220) self.Refresh() def onDraggingUp(self, event): self.parent.dragging = 0 self.parent.SetTransparent(255) self.SetCursor(wx.StockCursor(wx.CURSOR_ARROW)) and this are the binds for this events: self.Bind(wx.EVT_MOTION, self.onMouseMove) self.Bind(wx.EVT_LEFT_DOWN, self.onDraggingDown) self.Bind(wx.EVT_LEFT_UP, self.onDraggingUp) With this, if I click on the top of the panel, and move down or up, the panel position changes (I drag the panel) to the position of the mouse.

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  • Does this introduce security vulnerabilities?

    - by mcmt
    I don't think I'm missing anything. Then again I'm kind of a newbie. def GET(self, filename): name = urllib.unquote(filename) full = path.abspath(path.join(STATIC_PATH, filename)) #Make sure request is not tricksy and tries to get out of #the directory, e.g. filename = "../.ssh/id_rsa". GET OUTTA HERE assert full[:len(STATIC_PATH)] == STATIC_PATH, "bad path" return open(full).read()

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  • Optimization of Function with Dictionary and Zip()

    - by eWizardII
    Hello, I have the following function: def filetxt(): word_freq = {} lvl1 = [] lvl2 = [] total_t = 0 users = 0 text = [] for l in range(0,500): # Open File if os.path.exists("C:/Twitter/json/user_" + str(l) + ".json") == True: with open("C:/Twitter/json/user_" + str(l) + ".json", "r") as f: text_f = json.load(f) users = users + 1 for i in range(len(text_f)): text.append(text_f[str(i)]['text']) total_t = total_t + 1 else: pass # Filter occ = 0 import string for i in range(len(text)): s = text[i] # Sample string a = re.findall(r'(RT)',s) b = re.findall(r'(@)',s) occ = len(a) + len(b) + occ s = s.encode('utf-8') out = s.translate(string.maketrans("",""), string.punctuation) # Create Wordlist/Dictionary word_list = text[i].lower().split(None) for word in word_list: word_freq[word] = word_freq.get(word, 0) + 1 keys = word_freq.keys() numbo = range(1,len(keys)+1) WList = ', '.join(keys) NList = str(numbo).strip('[]') WList = WList.split(", ") NList = NList.split(", ") W2N = dict(zip(WList, NList)) for k in range (0,len(word_list)): word_list[k] = W2N[word_list[k]] for i in range (0,len(word_list)-1): lvl1.append(word_list[i]) lvl2.append(word_list[i+1]) I have used the profiler to find that it seems the greatest CPU time is spent on the zip() function and the join and split parts of the code, I'm looking to see if there is any way I have overlooked that I could potentially clean up the code to make it more optimized, since the greatest lag seems to be in how I am working with the dictionaries and the zip() function. Any help would be appreciated thanks!

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  • Where do files included in MANIFEST.in end up?

    - by Brian Hicks
    I'm not sure if I can't find this or if my google-fu is just lacking at the moment: I've got some HTML template files included in a package, with the following MANIFEST.in: recursive-include flockdoc/templates *.html In development, I'm including these (for Jinja) by doing path calculations, assuming that the "templates" directory is next to a certain file. When the package is installed with setup.py (using setuptools) the templates aren't copied into site-packages with the code. I understand that they're supposed to be somewhere like dist-packages, but none of the documentation I can find is pointing me to where the actual files are. It's also not giving me "best practice" for including these in my code. Any suggestions would be welcome there. the setup.py in question So: where are my files?

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  • pyPDF - Retrieve page numbers from document

    - by SquidneyPoitier
    At the moment I'm looking into doing some PDF merging with pyPdf, but sometimes the inputs are not in the right order, so I'm looking into scraping each page for its page number to determine the order it should go in (e.g. if someone split up a book into 20 10-page PDFs and I want to put them back together). I have two questions - 1.) I know that sometimes the page number is stored in the document data somewhere, as I've seen PDFs that render on Adobe as something like [1243] (10 of 150), but I've read documents of this sort into pyPDF and I can't find any information indicating the page number - where is this stored? 2.) If avenue #1 isn't available, I think I could iterate through the objects on a given page to try to find a page number - likely it would be its own object that has a single number in it. However, I can't seem to find any clear way to determine the contents of objects. If I run: pdf.getPage(0).getContents() This usually either returns: {'/Filter': '/FlateDecode'} or it returns a list of IndirectObject(num, num) objects. I don't really know what to do with either of these and there's no real documentation on it as far as I can tell. Is anyone familiar with this kind of thing that could point me in the right direction?

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  • Adding a child node to a JSON node dynamically

    - by Sai
    I have to create a nested multi level json depending on the resultset that I get from MYSQL. I created a json object initially. Now I want to add child nodes to the already child nodes in the object. d = collections.OrderedDict() jsonobj = {"test": dict(updated_at="today", ID="ID", ads=[])} for rows1 in rs: jsonobj['list']["ads"].append(dict(unit = "1", type ="ad_type", id ="123", updated_at="today", x_id="111", x_name="test")) cur.execute("SELECT * from f_test") rs1 = cur.fetchall() for rows2 in rs1: propertiesObj = [] d["name"]="propName" d["type"]="TypeName" d["value"]="Value1" propertiesObj.append(d) jsonobj['play_list']["ads"].append() Here in the above line I want to add another child node to [play_list].[ads] which is a array list again. the output should look like the following [list].[ads].[preferences].

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  • Detect if 2 HTML fragments have identical hierarchical structure

    - by sergzach
    An example of fragments that have identical hierarchical structure: (1) <div> <span>It's a message</span> </div> (2) <div> <span class='bold'>This is a new text</span> </div> An example of fragments that have different structure: (1) <div> <span><b>It's a message</b></span> </div> (2) <div> <span>This is a new text</span> </div> So, fragments with a similar structure correspond to one hierarchical tree (the same tag names, the same hierarchical structure). How can I detect if 2 elements (html fragments) have the same structure simply with lxml? I have a function that does not work properly for some more difficult case (than the example): def _is_equal( el1, el2 ): # input: 2 elements with possible equal structure and tag names # e.g. root = lxml.html.fromstring( buf ) # el1 = root[ 0 ] # el2 = root[ 1 ] # move from top to bottom, compare elements result = False if el1.tag == el2.tag: # has no children if len( el1 ) == len( el2 ): if len( el1 ) == 0: return True else: # iterate one of them, for example el1 i = 0 for child1 in el1: child2 = el2[ i ] is_equal2 = _is_equal( child1, child2 ) if not is_equal2: return False return True else: return False else: return False The code fails to detect that 2 divs with class='tovar2' have an identical structure: <body> <div class="tovar2"> <h2 class="new"> <a href="http://modnyedeti-krsk.ru/magazin/product/333193003"> ?????? ?/? </a> </h2> <ul class="art"> <li> ???????: <span>1759</span> </li> </ul> <div> <div class="wrap" style="width:180px;"> <div class="new"> <img src="shop_files/new-t.png" alt=""> </div> <a class="highslide" href="http://modnyedeti-krsk.ru/d/459730/d/820.jpg" onclick="return hs.expand(this)"> <img src="shop_files/fr_5.gif" style="background:url(/d/459730/d/548470803_5.jpg) 50% 50% no-repeat scroll;" alt="?????? ?/?" height="160" width="180"> </a> </div> </div> <form action="" onsubmit="return addProductForm(17094601,333193003,3150.00,this,false);"> <ul class="bott "> <li class="price">????:<br> <span> <b> 3 150 </b> ???. </span> </li> <li class="amount">???-??:<br><input class="number" onclick="this.select()" value="1" name="product_amount" type="text"> </li> <li class="buy"><input value="" type="submit"> </li> </ul> </form> </div> <div class="tovar2"> <h2 class="new"> <a href="http://modnyedeti-krsk.ru/magazin/product/333124803">?????? ?/?</a> </h2> <ul class="art"> <li> ???????: <span>1759</span> </li> </ul> <div> <div class="wrap" style="width:180px;"> <div class="new"> <img src="shop_files/new-t.png" alt=""> </div> <a class="highslide" href="http://modnyedeti-krsk.ru/d/459730/d/820.jpg" onclick="return hs.expand(this)"> <img src="shop_files/fr_5.gif" style="background:url(/d/459730/d/548470803_5.jpg) 50% 50% no-repeat scroll;" alt="?????? ?/?" height="160" width="180"> </a> </div> </div> <form action="" onsubmit="return addProductForm(17094601,333124803,3150.00,this,false);"> <ul class="bott "> <li class="price">????:<br> <span> <b>3 150</b> ???. </span> </li> <li class="amount">???-??:<br><input class="number" onclick="this.select()" value="1" name="product_amount" type="text"> </li> <li class="buy"> <input value="" type="submit"> </li> </ul> </form> </div> </body>

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