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  • Can MySQL reasonably perform queries on billions of rows?

    - by haxney
    I am planning on storing scans from a mass spectrometer in a MySQL database and would like to know whether storing and analyzing this amount of data is remotely feasible. I know performance varies wildly depending on the environment, but I'm looking for the rough order of magnitude: will queries take 5 days or 5 milliseconds? Input format Each input file contains a single run of the spectrometer; each run is comprised of a set of scans, and each scan has an ordered array of datapoints. There is a bit of metadata, but the majority of the file is comprised of arrays 32- or 64-bit ints or floats. Host system |----------------+-------------------------------| | OS | Windows 2008 64-bit | | MySQL version | 5.5.24 (x86_64) | | CPU | 2x Xeon E5420 (8 cores total) | | RAM | 8GB | | SSD filesystem | 500 GiB | | HDD RAID | 12 TiB | |----------------+-------------------------------| There are some other services running on the server using negligible processor time. File statistics |------------------+--------------| | number of files | ~16,000 | | total size | 1.3 TiB | | min size | 0 bytes | | max size | 12 GiB | | mean | 800 MiB | | median | 500 MiB | | total datapoints | ~200 billion | |------------------+--------------| The total number of datapoints is a very rough estimate. Proposed schema I'm planning on doing things "right" (i.e. normalizing the data like crazy) and so would have a runs table, a spectra table with a foreign key to runs, and a datapoints table with a foreign key to spectra. The 200 Billion datapoint question I am going to be analyzing across multiple spectra and possibly even multiple runs, resulting in queries which could touch millions of rows. Assuming I index everything properly (which is a topic for another question) and am not trying to shuffle hundreds of MiB across the network, is it remotely plausible for MySQL to handle this? UPDATE: additional info The scan data will be coming from files in the XML-based mzML format. The meat of this format is in the <binaryDataArrayList> elements where the data is stored. Each scan produces = 2 <binaryDataArray> elements which, taken together, form a 2-dimensional (or more) array of the form [[123.456, 234.567, ...], ...]. These data are write-once, so update performance and transaction safety are not concerns. My naïve plan for a database schema is: runs table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | start_time | TIMESTAMP | | name | VARCHAR | |-------------+-------------| spectra table | column name | type | |----------------+-------------| | id | PRIMARY KEY | | name | VARCHAR | | index | INT | | spectrum_type | INT | | representation | INT | | run_id | FOREIGN KEY | |----------------+-------------| datapoints table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | spectrum_id | FOREIGN KEY | | mz | DOUBLE | | num_counts | DOUBLE | | index | INT | |-------------+-------------| Is this reasonable?

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  • How to create a windows service from java app

    - by ideasculptor
    I've just inherited a java application that needs to be installed as a service on XP and vista. It's been about 8 years since I've used windows in any form and I've never had to create a service, let alone from something like a java app (I've got a jar for the app and a single dependency jar - log4j). What is the magic necessary to make this run as a service? I've got the source, so code modifications, though preferably avoided, are possible.

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  • Text Fade Effect in .NET Compact Framework

    - by Biju
    Hi all, I am creating a windows mobile application where i would like to do a fade In / Fade out of text which is getting displayed on a form. I am using C# for this purpose. Anyone can provide idea on this part? Thanks in Advance Regards Biju

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  • Disable the postback on an <ASP:LinkButton>

    - by y0mbo
    I have an ASP.NET linkbutton control on my form. I would like to use it for javascript on the client side and prevent it from posting back to the server. (I'd like to use the linkbutton control so I can skin it and disable it in some cases, so a straight up tag is not preferred). How do I prevent it from posting back to the server?

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  • text in textbox shows up as circles instead of regular characters?

    - by BlueMonster
    When i type in either of the textboxes i get little circles appearing instead of text. Why is this happening and how do i stop it? Code is as follows: HTML: <%@ Page Language="C#" AutoEventWireup="true" CodeBehind="MainPage.aspx.cs" Inherits="Foods.MainPage" %> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml"> <head runat="server"> <title></title> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <link id="Link1" rel="stylesheet" type="text/css" href="Styles/mainStyle.css"/> </head> <body> <form id="form1" runat="server"> <div class = "userIDTboxDiv"> <div class = "userIDTboxText"> &nbsp;&nbsp;&nbsp; Enter User ID: </div> <asp:TextBox id="userIDBox" TextMode="password" runat="server" Height="52px" Width="200px" /> </div> <div class = "passwordTboxDiv"> <div class = "passwordTboxText"> &nbsp;&nbsp;&nbsp; Enter User Password: </div> <asp:TextBox id="TextBox1" TextMode="password" runat="server" Height="52px" Width="200px" /> </div> </form> </body> CSS: body { text-decoration:none; background: white; } input { margin-left: 0px; margin-top: 7px; } .userIDTboxDiv { padding-top: 20%; padding-left: 45%; width: 15%; height: 30%; } .userIDTboxText { padding-left: 17%; height: auto; width:203px; } .passwordTboxDiv { padding-top: 2%; padding-left: 45%; width: 15%; height: 111px; } .passwordTboxText { padding-left: 10%; height: auto; width:203px; }

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  • Sandbox "Sorry — your last action could not be completed"

    - by aron
    My site was working fine with PayPal's sandbox, and then all of a sudden it stopped. Now I get the wonderful error Sandbox "Sorry — your last action could not be completed" This is my HTML: <body onload="document.Paypal.submit();"> <!-- item_number should get passed back --> <form name="Paypal" method="post" action="https://www.sandbox.paypal.com cgi-bin/webscr" id="Paypal"> <div> <input type="hidden" name="__VIEWSTATE" id="__VIEWSTATE" value="/wEPDwUKLTkyNTEyNzc0NGRk0LKGvSMTla6LgHpbOsdk7iC0iXE=" /> </div> <div> <input type="hidden" name="__EVENTVALIDATION" id="__EVENTVALIDATION" value="/wEWCALKhatPArLPtrsEAreImG4CweeH+AkCgMPhowcC+NaM4gQC+Y2VqwoCouzSnwEVXI9UvQxqI2UcdQ4SmcSWqfEZNw==" /> </div> <input type="hidden" name="cmd" value="_cart" /> <input type="hidden" name="upload" value="1" /> <!-- The following is for itemized PayPal data instead of the aggregated version --> <input type="hidden" name="item_name_1" value="LEADING SKILLS 4/10/2012 6:00 PM Section: Members " /> <input type="hidden" name="amount_1" value="250.00" /> <input type="hidden" name="quantity_1" value="2" /> <input type="hidden" name="handling_cart" value="7.00" /> <input type="hidden" name="tax_cart" value="35.00" /> <!-- STANDARD DATA --> <input name="business" type="hidden" id="business" value="[email protected]" /> <input name="invoice" type="hidden" id="invoice" value="TS-1E8B59A0-B" /> <input type="hidden" name="no_note" value="0" /> <input name="currency_code" type="hidden" id="currency_code" value="USD" /> <input name="shipCountry" type="hidden" id="shipCountry" /> <input type="hidden" name="return" value="http://rockclimbing.venueblue.com/Gateway/paypal/Complete.aspx?id=db86c0bf-beb8-4e37-b495-bed1d3e7e6f3" /> <input name="cancel_returnUrl" type="hidden" id="cancel_returnUrl" value="http://rockclimbing.venueblue.com/ShoppingCart.aspx" /> <input type="hidden" name="cn" value="How did you hear about us?" /> <input name="custom" type="hidden" id="custom" value="db86c0bf-beb8-4e37-b495-bed1d3e7e6f3" /> <input name="notify_url" type="hidden" id="notify_url" value="http://rockclimbing.venueblue.com/Gateway/Paypal/IPN.aspx" /> <input type="submit" value="Submit Payment Info" style="display:none;" /> Processing Order.... </form> </body> Anyone have a clue what happened?

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  • Working with custom role in VB.NET win application

    - by fireBand
    Hi, I am looking for ways to implement custom user-roles in windows application with vb.net. I got a database table called Roles with Administrator and User entries. User cannot see some of the form data. In ASP.NET MVC we can do like. [Authorize(Roles = "Administrator")] public function GetAccount() as Array End Function If it could be done this way that would be great. Thanks in advance.

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  • Embed flash ActiveX in vb6 dynamically?

    - by Alex
    im trying to embed flash in my program by placing flash.ocx in my app's folder without having to register it. i found DirectCom.dll and with this code i can show the right version of flash. but how do i show it on the form and load the movie? Private Declare Function GetInstanceOld Lib "DirectCom" Alias "GETINSTANCE" (FName As String, ClassName As String) As Object Dim ShockwaveFlash1 As Object Set ShockwaveFlash1 = GetInstanceEx(StrPtr(App.Path & "\" & "flash.ocx"), StrPtr("ShockwaveFlash"), True) MsgBox ShockwaveFlash1.FlashVersion

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  • What are PHP 5.2 settnigs which affect compatibility with old code (developed for PHP 4 and 3)?

    - by Ivan
    What are PHP 5.2 settnigs which affect compatibility with old code (developed for PHP 4 and 3)? A web application using XTemplate 0.2.4-2 (officially meant for 3.0.11) works fine on one server running PHP 5.2 but works incorrect (seems that the form can't be submitted or processed correctly) on new PHP 5.2 and 5.3 installations. What may I need to tweak on new servers to make them able to run legacy code?

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  • Creating a wine static executable?

    - by asdf
    Hi, I have some windows command line applications, in binary form (I do not have the source code) which I use frequently. Sometimes I need to run them in Linux machines, and it works perfectly under wine (wine is not an emulator). The problem I'm facing now is that I need to work on a cluster which has not wine installed on it. I wonder if it is possible to create in another similar linux machine kind of a static executable or so, so i can run this windows program on the cluster Thanks

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  • CKEditor disable HTML transformation

    - by flos
    I've got a problem with CKEditor. Especially the br- and img-Tags are transformed to not be valid. In the source-view I see and but when I inspect the rte-source the slashes are gone as well as when submitting the form. Can someone tell me where I can disable this or enable XHTML-conformity? The embedding page is XHTML. Thank to any hints, ideas or solutions.

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  • What's beyond c,c++ and data structure?

    - by sagacious
    I have learnt c and c++ programming languages.i have learnt data structure too. Now i'm confused what to do next?my aim is to be a good programmer. i want to go deeper into the field of programming and making the practical applications of what i have learnt. So,the question takes the form-what to do next?Or is there any site where i can see advantage of every language with it's features? sorry,if there's any language error and thanks in advance.

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  • Receiving the post response using curl

    - by Larry Battle
    Hello, I'm trying to make a script that will download search results from a HTTPS website using POST. So far, I'm able to download the web page before the submission but not the response page containing the search results. The problem seems to be that curl isn't waiting long enough for the response page to appear. The website behaviors likes this. Website appears- input form data - click submit - progressing icon appears - returns new web page with search results( new data but the url doesn't change ) My code: curl -d "postData" -k url

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  • html:checkbox query

    - by sarah
    Hi All, i have the following code . and in Form is have property called isActive of type char ,how would i get the checked value of it ,i am getting some symbols like 'o' if checked. I am using userform.getIsActive() ,where i am going wrong .I want 'y' or 'n' values

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  • Delegates And Cross Thread Exception

    - by Neo
    Whenever i am updating UI in windows form using delegate it gives me cross thread exception why it is happening like this? is there new thread started for each delegate call ? void Port_DataReceived(object sender, SerialDataReceivedEventArgs e) { //this call delegate to display data clsConnect(statusMsg); } protected void displayResponse(string resp) { //here cross thread exception occur if directly set to lblMsgResp.Text="Test"; if (lblMsgResp.InvokeRequired) { lblMsgResp.Invoke(new MethodInvoker(delegate { lblMsgResp.Text = resp; })); } }

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  • What makes an input vulnerable to XSS?

    - by vtortola
    Hi! I've been reading about XSS and I made a simple form with a text and submit input, but when I execute <script>alert();</script> on it, nothing happens, the server gets that string and that's all. What do I have to do for make it vulnerable?? (then I'll learn what I shouldn't do hehe) Cheers.

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  • Is it possible to create a DateFormatter which converts a two-digit year into a four-digit year?

    - by DR
    In my Java application I use a DateFormat instance to parse date inputs. DateFormat fmt; fmt = DateFormat.getDateInstance(DateFormat.DEFAULT) // dd.MM.yyyy for de_DE The problem is that the user insists to enter dates in the form 31.12.11. Unfortunately this is parsed to 31.12.11. (0011-12-31 in ISO format) Instead I want the parsed date to become 31.12.2011 (2011-12-31 in ISO format). Can I modify the date format to somehow parse inputs that way?

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  • [CakePHP] htmlspecialchars

    - by user198003
    hi all, if i submit data like my string using form on insert/edit view, on a list view i'll get my string as italic (like here). how can i avoid that, and to have my string (with visible all html tags) on all forms? tnx in adv!

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