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• Awk filtering values between two files when regions intersect (any solutions welcome)

  - by user964689

  This is building upon an earlier question Awk conditional filter one file based on another (or other solutions) I have an awk program that outputs a column from rows in a text file 'refGene.txt if values in that row match 2 out of 3 values in another text file. I need to include an additional criteria for finding a match between the two files. The criteria is inclusion if the range of the 2 numberical values specified in each row in file 1 overlap with the range of the two values in a row in refGene.txt. An example of a line in File 1: chr1 10 20 chr2 10 20 and an example line in file 2(refGene.txt) of the matching columns ($3, $5, $ 6): chr1 5 30 Currently the awk program does not treat this as a match because although the first column matches neither the 2nd or 3rd columns do no. But I would like a way to treat this as a match because the region 10-20 in file 1 is WITHIN the range of 5-30 in refGene.txt. However the second line in file 1 should NOT match because the first column does not match, which is necessary. If there is a way to include cases when any of the range in file 1 overlaps with any of the range in refGene.txt that would be really helpful. It should also replace the below conditional statements as it would also find all the cases currently described below. Please let me know if my question is unclear. Any help is really appreciated, thanks it advance! (solutions do not have to be in awk) Rubal FILES=/files/*txt for f in $FILES ; do awk ' BEGIN { FS = "\t"; } FILENAME == ARGV[1] { pair[ $1, $2, $3 ] = 1; next; } { if ( pair[ $3, $5, $6 ] == 1 ) { print $13; } } ' $(basename $f) /files/refGene.txt > /files/results/$(basename $f) ; done

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• Detect IE version in Javascript

  - by Chad Decker

  I want to bounce users of our web site to an error page if they're using a version of Internet Explorer prior to v9. It's just not worth our time and money to support IE pre-v9. Users of all other non-IE browsers are fine and shouldn't be bounced. Here's the proposed code: if(navigator.appName.indexOf("Internet Explorer")!=-1){ //yeah, he's using IE var badBrowser=( navigator.appVersion.indexOf("MSIE 9")==-1 && //v9 is ok navigator.appVersion.indexOf("MSIE 1")==-1 //v10, 11, 12, etc. is fine too ); if(badBrowser){ // navigate to error page } } Will this code do the trick? To head off a few comments that will probably be coming my way: [1] Yes, I know that users can forge their useragent string. I'm not concerned. [2] Yes, I know that programming pros prefer sniffing out feature-support instead of browser-type but I don't feel this approach makes sense in this case. I already know that all (relevant) non-IE browsers support the features that I need and that all pre-v9 IE browsers don't. Checking feature by feature throughout the site would be a waste. [3] Yes, I know that someone trying to access the site using IE v1 (or = 20) wouldn't get 'badBrowser' set to true and the warning page wouldn't be displayed properly. That's a risk we're willing to take. [4] Yes, I know that Microsoft has "conditional comments" that can be used for precise browser version detection. IE no longer supports conditional comments as of IE 10, rendering this approach absolutely useless. Any other obvious issues to be aware of? Thanks.

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• razor websites not working and all dlls are present

  - by Michael Tot Korsgaard

  I've uploaded a .cshtml website to a surftown server, and I got some problems running the code. But I have a problem with it running the Razor code. This is how the page renders:(Default.cshtml) I've already checked for internal communication problems. And this is my result: But then why isn't it working, and how can I fix it? I've heard that it can be a problem with views but how whould I fix this if that's the case? My websites folder tree: (And some files too) App_Code App_Data packages Microsoft.AspNet.Razor.2.0.20710.0 Microsoft.Asp.Net.WebPages.2.0.20710.0 Microsoft.Asp.Net.WebPages.Administration.2.0.20710.0 Microsoft.Asp.Net.WebPages.Data.2.0.20710.0 Microsoft.Asp.Net.WebPages.WebData.2.0.20710.0 Microsoft.Web.Infrastructure.1.0.0.0 NuGet.Core.1.6.2 bin packages jQuery.2.0.3 Content Scripts Tools Microsoft.AspNet.Mvc.4.0.30506.0 lib net40 Microsoft.AspNet.Razor.2.0.30506.0 lib net40 Microsoft.AspNet.WebPages.2.0.30506.0 lib net40 Pages Chapters Read.cshtml Edit Move Chapter.cshtml Entry.cshtml Entries EnterEntry.cshtml EnterNote.cshtml Login Login.cshtml Search Result.cshtml Scripts Addons TinyMCE Styles CSS Views _Layout.cshtml Default.cshtml My web.config file looks like this: <?xml version="1.0"?> <configuration> <system.web> <compilation debug="true" targetFramework="4.0"> <buildProviders> <add extension=".cshtml" type="System.Web.WebPages.Razor.RazorBuildProvider, System.Web.WebPages.Razor"/> </buildProviders> <assemblies> <add assembly="System.Web.Mvc, Version=4.0.0.0, Culture=neutral, PublicKeyToken=31BF3856AD364E35"/> </assemblies> </compilation> </system.web> <connectionStrings> <add connectionString="database connection" providerName="System.Data.SqlClient"/> </connectionStrings> </configuration> EDIT: Is it a problem that all my files are .cshtml?

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• Update panel problem

  - by ram

  Here is my code: <body> <form id="form1" runat="server"> <div> <asp:ScriptManager ID="ScriptManager1" runat="server"> </asp:ScriptManager> <asp:UpdatePanel ID="UpdatePanel1" UpdateMode="Conditional" ChildrenAsTriggers="false" runat="server"> <ContentTemplate> <asp:Button ID="Button1" runat="server" Text="Click1" OnClick="Button1_Click" /> <br /> <br /> Last refresh <%=DateTime.Now.ToString() %> <br /> <br /> <asp:UpdatePanel ID="UpdatePanel2" UpdateMode="Conditional" ChildrenAsTriggers="true" runat="server"> <ContentTemplate> <asp:Button ID="Button2" runat="server" Text="Click2" OnClick="Button2_Click" /> <br /> <br /> Last refresh <%=DateTime.Now.ToString() %> <br /> <br /> </ContentTemplate> <Triggers> <asp:AsyncPostBackTrigger ControlID="Button2" EventName="Click" /> </Triggers> </asp:UpdatePanel> </ContentTemplate> <Triggers> <asp:AsyncPostBackTrigger ControlID="Button1" EventName="Click" /> </Triggers> </asp:UpdatePanel> </div> </form> </body> Im using two update panels here, when i click "Button2" then "UpdatePanel2" was refreshed, if i click "Button1" then both update panel were refreshed, but my need is if i click "Button1" then "UpdatePanel1" have to be refreshed. Thanks.

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• Keeping values on form after submition

  - by Lina

  Hi, I'm trying to keep the entered data in the form after submitting by using "value=..." I'm getting a compilation error on the following code: <form id="myform"> <input id="hour" type="text" name="hour" value="<%=hour%>" style="width:30px; text-align:center;" /> : <input id="minute" type="text" name="minute" value="<%=minute%>" style="width:30px; text-align:center;" /> <br/> <input type="submit" value="Validate!" /> </form> the error is : Description: An error occurred during the compilation of a resource required to service this request. Please review the following specific error details and modify your source code appropriately. Compiler Error Message: CS0103: The name 'hour' does not exist in the current context any solution? thanks a lot in advance, Lina

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• pdfLaTeX + memoir class compile error

  - by Sebastien

  Hi, I'm in the middle of writing my thesis, and was using KOMA-Script. The document compiles just fine. I stumbled upon the memoir class yesterday, and was thinking of giving it a try, so here I am trying to compile with this class instead of KOMA-Script. First compilation is OK On second compilation, the document would not build (./fourier/fourier.tex [98] ! Undefined control sequence. <argument> ... C\protect \noexpand \protect \bond \protect \noexpand \protec... l.1 \chapter {Homogénéisation numérique par transformée de Fourier rapide} ? It has apparently not connected to hyperlink (btw, I'm using memhfixc), since I've commented this one out. Here is the preamble of my document, any thoughts ? Thanks in advance, S %\documentclass[draft, 11pt, a4paper, chapterprefix]{scrreprt} \documentclass[draft, 11pt, a4paper]{memoir} \usepackage[authoryear, round]{natbib} \usepackage[french]{babel} \usepackage[latin1]{inputenc} \usepackage{pdfsync} \usepackage[version=3]{mhchem} \usepackage{pgf} \usepackage{microtype} \usepackage{txfonts} % Polices times \usepackage[notref, notcite]{showkeys} \usepackage{amsmath} \usepackage{amssymb} \usepackage[bvec]{sbmacros} \usepackage{micromechanics} \usepackage{pgfcad} %\usepackage[breaklinks=true]{hyperref} %\usepackage{memhfixc} % Pour assurer la compatibilité entre memoir et hyperref %\newcommand{\url}[1]{\texttt{#1}} % Options KOMA-Script % \addtokomafont{caption}{\small} % \pagestyle{headings}

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• Why are virtual methods considered early bound?

  - by AspOnMyNet

  One definition of binding is that it is the act of replacing function names with memory addresses. a) Thus I assume early binding means function calls are replaced with memory addresses during compilation process, while with late binding this replacement happens during runtime? b) Why are virtual methods also considered early bound (thus the target method is found at compile time, and code is created that will call this method)? As far as I know, with virtual methods the call to actual method is resolved only during runtime and not compile time?! thanx EDIT: 1) A a=new A(); a.M(); As far as I know, it is not known at compile time where on the heap (thus at which memory address ) will instance a be created during runtime. Now, with early binding the function calls are replaced with memory addresses during compilation process. But how can compiler replace function call with memory address, if it doesn’t know where on the heap will object a be created during runtime ( here I’m assuming the address of method a.M will also be at same memory location as a )? 2) v-table calls are neither early nor late bound. Instead there's an offset into a table of function pointers. The offset is fixed at compile time, but which table the function pointer is chosen from depends on the runtime type of the object (the object contains a hidden pointer to its v-table), so the final function address is found at runtime. But assuming the object of type T is created via reflection ( thus app doesn’t even know of existence of type T ), then how can at compile time exist an entry point for that type of object?

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• Does ASP.NET need to be configured for Full Trust to implement 'PageHandlerFactory' ?

  - by Kev

  Our hosting platform (running IIS6/ASP.NET 2.0) is configured to run under partial trust. In the machine wide web.config file we set the ASP.NET trust level to Medium (and lock to prevent overrides) and use a modified policy file. When trying to add a custom HttpHandler to handle .aspx requests for a website running in this configuration I get the following security exception: Security Exception Description: The application attempted to perform an operation not allowed by the security policy. To grant this application the required permission please contact your system administrator or change the application's trust level in the configuration file. Exception Details: System.Security.SecurityException: Request failed. Source Error: An unhandled exception was generated during the execution of the current web request. Information regarding the origin and location of the exception can be identified using the exception stack trace below. Stack Trace: [SecurityException: Request failed.] System.Reflection.Assembly._GetType(String name, Boolean throwOnError, Boolean ignoreCase) +0 System.Reflection.Assembly.GetType(String name, Boolean throwOnError, Boolean ignoreCase) +42 System.Web.Compilation.CompilationUtil.GetTypeFromAssemblies(AssemblyCollection assembliesCollection, String typeName, Boolean ignoreCase) +172 System.Web.Compilation.BuildManager.GetType(String typeName, Boolean throwOnError, Boolean ignoreCase) +291 System.Web.Configuration.ConfigUtil.GetType(String typeName, String propertyName, ConfigurationElement configElement, XmlNode node, Boolean checkAptcaBit, Boolean ignoreCase) +52 I'm using a class derived from PageHandlerFactory, for example: public class MyPageHandlerFactory : PageHandlerFactory { public override System.Web.IHttpHandler GetHandler(System.Web.HttpContext context, string requestType, string virtualPath, string path) { // CustomPageHandler derives from System.Web.UI.Page return new CustomPageHandler(); } } My web.config httpHandler configuration is as follow: <httpHandlers> <add verb="*" path="*.aspx" type="MyPageHandler.MyPageHandlerFactory" /> </httpHandlers> The documentation for PageHandlerFactory shows that PageHandlerFactory is decorated with the following attributes: [PermissionSetAttribute(SecurityAction.LinkDemand, Unrestricted = true)] [PermissionSetAttribute(SecurityAction.InheritanceDemand, Unrestricted = true)] public class PageHandlerFactory : IHttpHandlerFactory Does this mean that I need to set ASP.NET to run at Full Trust to be able to create my own PageHandlerFactory classes?

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• template style matrix implementation in c

  - by monkeyking

  From time to time I use the following code for generating a matrix style datastructure typedef double myType; typedef struct matrix_t{ |Compilation started at Mon Apr 5 02:24:15 myType **matrix; | size_t x; |gcc structreaderGeneral.c -std=gnu99 -lz size_t y; | }matrix; |Compilation finished at Mon Apr 5 02:24:15 | | matrix alloc_matrix(size_t x, size_t y){ | if(0) | fprintf(stderr,"\t-> Alloc matrix with dim (%lu,%lu) byteprline=%lu bytetotal:%l\| u\n",x,y,y*sizeof(myType),x*y*sizeof(myType)); | | myType **m = (myType **)malloc(x*sizeof(myType **)); | for(size_t i=0;i<x;i++) | m[i] =(myType *) malloc(y*sizeof(myType *)); | | matrix ret; | ret.x=x; | ret.y=y; | ret.matrix=m; | return ret; | } And then I would change my typedef accordingly if I needed a different kind of type for the entries in my matrix. Now I need 2 matrices with different types, an easy solution would be to copy/paste the code, but is there some way to do a template styled implementation. Thanks

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• Is a call to the following method considered late binding?

  - by AspOnMyNet

  1) Assume: • B1 defines methods virtualM() and nonvirtualM(), where former method is virtual while the latter is non-virtual • B2 derives from B1 • B2 overrides virtualM() • B2 is defined inside assembly A • Application app doesn’t have a reference to assembly A In the following code application app dynamically loads an assembly A, creates an instance of a type B2 and calls methods virtualM() and nonvirtualM(): Assembly a=Assembly.Load(“A”); Type t= a.GetType(“B2”); B1 a = ( B1 ) Activator.CreateInstance ( “t” ); a.virtualM(); a.nonvirtualM(); a) Is call to a.virtualM() considered early binding or late binding? b) I assume a call to a.nonvirtualM() is resolved during compilation time? 2) Does the term late binding refer only to looking up the target method at run time or does it also refer to creating an instance of given type at runtime? thanx EDIT: 1) A a=new A(); a.M(); As far as I know, it is not known at compile time where on the heap (thus at which memory address ) will instance a be created during runtime. Now, with early binding the function calls are replaced with memory addresses during compilation process. But how can compiler replace function call with memory address, if it doesn’t know where on the heap will object a be created during runtime ( here I’m assuming the address of method a.M will also be at same memory location as a )? 2) The method slot is determined at compile time I assume that by method slot you’re referring to the entry point in V-table?

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• VS 2008 C++ build output?

  - by STingRaySC

  Why when I watch the build output from a VC++ project in VS do I see: 1Compiling... 1a.cpp 1b.cpp 1c.cpp 1d.cpp 1e.cpp [etc...] 1Generating code... 1x.cpp 1y.cpp [etc...] The output looks as though several compilation units are being handled before any code is generated. Is this really going on? I'm trying to improve build times, and by using pre-compiled headers, I've gotten great speedups for each ".cpp" file, but there is a relatively long pause during the "Generating Code..." message. I do not have "Whole Program Optimization" nor "Link Time Code Generation" turned on. If this is the case, then why? Why doesn't VC++ compile each ".cpp" individually (which would include the code generation phase)? If this isn't just an illusion of the output, is there cross-compilation-unit optimization potentially going on here? There don't appear to be any compiler options to control that behavior (I know about WPO and LTCG, as mentioned above). EDIT: The build log just shows the ".obj" files in the output directory, one per line. There is no indication of "Compiling..." vs. "Generating code..." steps. EDIT: I have confirmed that this behavior has nothing to do with the "maximum number of parallel project builds" setting in Tools - Options - Projects and Solutions - Build and Run. Nor is it related to the MSBuild project build output verbosity setting. Indeed if I cancel the build before the "Generating code..." step, the ".obj" files will not exist for the most recent set of "compiled" files. E.g., if I cancel the build during "c.cpp" above, I will see only "a.obj" and "b.obj".

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• Hudson Maven build fails using workspace POM, works when pointing to development copy

  - by Deejay

  I'm developing a series of web applications using Eclipse IDE, Maven, SVN, and Hudson for CI. When I specify the "Root POM" option in my Hudson job to be the copy of pom.xml in its workspace directory, the build fails citing compilation failure due to missing classpath entries. [ERROR] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Compilation failure C:\Users\djones\.hudson\jobs\Store\workspace\trunk\src\main\java\com\app\store\model\User.java:[24,42] package org.hibernate.validator.constraints does not exist C:\Users\djones\.hudson\jobs\Store\workspace\trunk\src\main\java\com\app\store\dao\UserGroupHibernateSupportDao.java:[8,20] package org.hibernate does not exist C:\Users\djones\.hudson\jobs\Store\workspace\trunk\src\main\java\com\app\store\dao\UserGroupHibernateSupportDao.java:[10,49] package org.springframework.orm.hibernate3.support does not exist When I specify the "Root POM" to be the copy of pom.xml in my Eclipse workspace, it builds just fine. It builds fine from Eclipse too. I want to move Hudson over to a separate machine so several developers can use it, so I can't very well point to my own development workspace to give it a POM. If I try putting an SVN URL in the "root pom.xml" option, it says file not found. What should I be entering here for a project worked on by several developers, and hosted in an SVN repository?

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• getting CS1502 compiler error on dev environment but not production.

  - by nw

  When I try to run my ASP.NET app from my development environment I get the following error message: Compiler Error Message: CS1502: The best overloaded method match for 'mmars.Printing.printFunctions.SetPrintSummaryProperties(mmars.contextInfo, ref mmars.Printing.printObjSummary)' has some invalid arguments. When I publish and run on our production server I don't get this error. It seems to compile fine when I build from the build menu (in fact if I change the second argument of the bolded function call below, i get a compiler error in visual studio), but now i've suddenly started getting this error message at runtime. So another question I have in addition to getting rid of the error is why is the .NET development server even trying to do JIT compilation on my project if it is already compiled into a DLL? Printing.printObjSummary myPrintObj = new Printing.printObjSummary(); Printing.printFunctions.SetPrintSummaryProperties(ci, ref myPrintObj); printObjects.Add(myPrintObj); This seems to have just suddenly appeared from nowhere today and it's extremely frustrating. Also, though there are no warnings at compile-time, when I get redirected to the page with that first compilation error there are many warnings like the following: Warning: CS0436: The type 'mmars.MMARSSummaryDataItem' in 'c:\WINDOWS\Microsoft.NET\Framework\v2.0.50727\Temporary ASP.NET Files\root\3dad423c\40569048\App_Code.b0rgpkzr.4.cs' conflicts with the imported type 'mmars.MMARSSummaryDataItem' in 'c:\WINDOWS\Microsoft.NET\Framework\v2.0.50727\Temporary ASP.NET Files\root\3dad423c\40569048\assembly\dl3\7179c19a\345f948c_ece7ca01\mmars.DLL'. Using the type defined in 'c:\WINDOWS\Microsoft.NET\Framework\v2.0.50727\Temporary ASP.NET Files\root\3dad423c\40569048\App_Code.b0rgpkzr.4.cs'. What's the deal with that? Is the webserver complaining about name conflicts in the source file and dll resulting from the source file?

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• read the currency format

  - by user485783

  perhaps for some people this is easy, but I want to learn There are 2 currency formats: first currency format is 1,123,123.12 and this format may be like $1,123,123.12 or 1,123,123.12€ and second currency format is 1.123.123,12 and this may be such $1.123.123,12 or 1.123.123,12€ so the difference is the placement of dots and commas The above format will be $this->value('one of the currency format insert here'); e.g. $this->value('$1,123,123.12'); or $this->value('1.123.123,12€'); that I want to know is the code if (first currency format) {use blah .. blah ..} elseif (second currency format) {use blah .. blah ..} else {/ / unsupported format} so how the code to identify whether the entry is input the first currency format or second currency format? thanks for the your pointers and ideas. UPDATED: I apologize for mistake in giving examples When I tried to test the code I have a little confused because it seems not working then I changed my prevoious parts, so that $value['amount'] it may be use first currency format 1,123,123.12 and this format may be like $1,123,123.12 or 1,123,123.12€ and second currency format 1.123.123,12 and this may be such $1.123.123,12 or 1.123.123,12€ then the value['amount'] will identify first with code like the following conditional class curr_format { private bla...bla..1 private bla...bla..2 var etc.. public function curr_format ($bla...,$and_bla..) { //then make conditional is here if (first currency format) {//use blah .. blah ..} elseif (second currency format) {//use blah .. blah ..} else {/ / unsupported format} //another codes.. at the end output as look like: $identify = new curr_format(); echo $identify->curr_format($value['amount'],$else_statement);

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• Need opinions on LaTeX and ever upgrading

  - by yCalleecharan

  Hi, I've been using LaTeX since 2005 with the TeXLive distribution and I've been upgrading as each new TeXLive distribution comes out. In the recent years I noticed an increase in new packages, updated packages and in one instance a new package bearing a different name replacing an old one by the same package author. A LaTeX document which relies heavily on packages and which has been produced a few years back may start to get some warnings and error messages on present-day LaTeX compilation. The primary reason I switched to LaTeX is because of its reliability and robustness to create big documents easily, not to mention the adorable typographic quality. With LaTeX one doesn't have to worry about how to open a docx in an old program supporting only doc for instance. Now, when there are so much continual changes in the packages in a LaTeX distribution, I tend to wonder when will this madness end. Not that having enhanced and new features are bad in packages, but not all updated packages are backward compatible. Eventually one would like to be able to compile a LaTeX file in 10 years time that he/she is working on at present and not get any compilation warnings/error messages due to some unpredictable behavior of updated packages or due to a package that has been cast-off from a LaTeX distribution. If I understand correctly CTAN do keep a database with all packages from different versions. I would like to know how you LaTeX users handle this issue. Thanks a lot...

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• How do I export a package symbol to a namespace in Perl?

  - by Mike

  I'm having trouble understanding how to export a package symbol to a namespace. I've followed the documentation almost identically, but it seems to not know about any of the exporting symbols. mod.pm #!/usr/bin/perl package mod; use strict; use warnings; require Exporter; @ISA = qw(Exporter); @EXPORT=qw($a); our $a=(1); 1; test.pl $ cat test.pl #!/usr/bin/perl use mod; print($a); This is the result of running it $ ./test.pl Global symbol "@ISA" requires explicit package name at mod.pm line 10. Global symbol "@EXPORT" requires explicit package name at mod.pm line 11. Compilation failed in require at ./test.pl line 3. BEGIN failed--compilation aborted at ./test.pl line 3. $ perl -version This is perl, v5.8.4 built for sun4-solaris-64int

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• Drupal Ubercart: error in passing values back to the Content Type after checkout

  - by user512826

  I am trying to set up event registration in a drupal site using Ubercart + the UC Node Checkout Module. I have followed the instructions provided in http://drupaleasy.com/blogs/ultimike/2009/03/event-registration-ubercart. However I seem to be unable to pass the Order ID and Payment Status back to the node. I have created a conditional action that on node checkout executes the following PHP code: I am using the following code to update the node on checkout - but nothing happens: if (isset($order)) { foreach ($order->products as $product) { if (isset($product->data['node_checkout_nid'])) { $node = node_load($product->data['node_checkout_nid']); $node->field_status['0']['value'] = 1; $node->field_orderid['0']['value'] = $order->order_id; node_save($node); } } } I know the conditional action is working because it prints dsm('hello world') messages on node checkout - however when I include a dsm($node) or dsm($product) in the PHP code, they return blank. Also when I go back to my product and click the 'Devel' tab, the 'data' string contains the following characters: a:1:{s:13:"form_build_id";s:37:"form-3ccc03345f4832c69666a89c560de940";} In this link http://www.ubercart.org/forum/support/10951/node_checkout_issue I found someone else with the same issue, but I have been unable to replicate his solution. Can anybody please help? Thanks so much!

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• What headers do I want to send together with a 304 response?

  - by Willem

  When I send a 304 response. How will the browser interpret other headers which I send together with the 304? E.g. header("HTTP/1.1 304 Not Modified"); header("Expires: " . gmdate("D, d M Y H:i:s", time() + $offset) . " GMT"); Will this make sure the browser will not send another conditional GET request (nor any request) until $offset time has "run out"? Also, what about other headers? Should I send headers like this together with the 304: header('Content-Type: text/html'); Do I have to send: header("Last-Modified:" . $modified); header('Etag: ' . $etag); To make sure the browser sends a conditional GET request the next time the $offset has "run out" or does it simply save the old Last Modified and Etag values? Are there other things I should be aware about when sending a 304 response header?

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• Preserving timestamps on Clojure .clj files when building shaded jar via Maven Shade Plugin

  - by Dereference

  When using the maven-shade-plugin to package our jar artifact that contained a few Clojure libs and some Java. We were using AOT compilation for our Clojure code. When we loaded the jar, it was having very slow load times. AOT compilation is supposed to help this quite a bit, but that wasn't what we were seeing. We noticed in java jar -verbose output that there was a lot of JVM__DEFINE_CLASS calls happening when Clojure classes were being loaded. This didn't make sense, since more of our Clojure code was AOT compiled to .class files. Turns out the maven-shade-plugin creates all new files, with new timestamps in the final artifact Clojure uses the timestamp information on a .clj file vs. a .class file, to determine if the file needs to be recompiled. The maven-shade-plugin was causing the .clj file and it's associated .class file to have the same timestamp, so Clojure always chose to dynamically recompile the source. The only workaround that we have been able to figure out, at this point, is to write a script that would re-open the shaded jar and bump the .clj file timestamps back to some time in the past, so that they wouldn't be equal to the timestamps of their associated .class files. Does anyone know of a better approach?

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• javascript array/object issue

  - by FlyingCat

  I am trying to push elements to an array. for (a=0; a < test.length; a++){ if(this.testnumber != test[a].number){ //it will only loop 8 times under conditional statement group = { title: test.Title , ID: test.ID, contents: [] }; this.company.push(group); this.testnumber = test.number[a]; } //outside of if conditional statement.. it will loop 15 times //i want every test[a].conetents get pushed to group.contents array. //this.company is the final variable I need for this function... group.contents.push(test[a].contents); } However, when I do console.log(this.company); I see 8 elmements with only 1 element in each group.contents array The ideal situation is to have 8 elements with 2 to 3 elements in the group.contents array I hope I explain my situation well. Any idea how to solve my issue? Thanks a lot!

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• Guru of the Week 2 no match for the operator==

  - by Adam

  From Guru of the Week 2. We have the function: string FindAddr(const list<Employee> l, string name) { for( list<Employee>::const_iterator i = l.begin(); i != l.end(); i++) { if( *i == name ) // here will be compilation error { return (*i).addr; } } return ""; } I added dummy Employee class to that: class Employee { string n; public: string addr; Employee(string name) : n(name) {} Employee() {} string name() const { return n; } operator string() { return n; } }; And got compilation error: error: no match for ‘operator==’ in ‘i.std::_List_iterator<_Tp>::operator* [with _Tp = Employee]() == name’ It works only if add operator== to Employee. But, Herb Sutter wrote that: The Employee class isn't shown, but for this to work it must either have a conversion to string or a conversion ctor taking a string. But Employee has a conversion function and conversion constructor as well. GCC version 4.4.3. Compiled normally, g++ file.cpp without any flags. There should be implicit conversion and it should work, why it doesn't?

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• Why does the VS2005 debugger not report "base." values properly? (was "Why is this if statement fail

  - by Rawling

  I'm working on an existing class that is two steps derived from System.Windows.Forms.Combo box. The class overrides the Text property thus: public override string Text { get { return this.AccessibilityObject.Value; } set { if (base.Text != value) { base.Text = value; } } } The reason given for that "get" is this MS bug: http://support.microsoft.com/kb/814346 However, I'm more interested in the fact that the "if" doesn't work. There are times where "base.Text != value" is true and yet pressing F10 steps straight to the closing } of the "set" and the Text property is not changed. I've seen this both by just checking values in the debugger, and putting a conditional breakpoint on that only breaks when the "if" statement's predicate is true. How on earth can "if" go wrong? The class between this and ComboBox doesn't touch the Text property. The bug above shouldn't really be affecting anything - it says it's fixed in VS2005. Is the debugger showing different values than the program itself sees? Update I think I've found what is happening here. The debugger is reporting value incorrectly (including evaluating conditional breakpoints incorrectly). To see this, try the following pair of classes: class MyBase { virtual public string Text { get { return "BaseText"; } } } class MyDerived : MyBase { public override string Text { get { string test = base.Text; return "DerivedText"; } } } Put a breakpoint on the last return statement, then run the code and access that property. In my VS2005, hovering over base.Text gives the value "DerivedText", but the variable test has been correctly set to "BaseText". So, new question: why does the debugger not handle base properly, and how can I get it to?

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• How can I create a .jar file?

  - by Roman

  In the tutorial I found out that jar files can be created in the following way: jar cf jar-file input-file(s) However, it was not clear what are the input-file(s). Is that .java files or .class files? From the examples on the same page I can assume that should be .class files. But now it is not clear which .class files should I put there. After the compilation of .java files I have a lot of .class files. One of the reason of that is that I have a lot files like that: GameWindow$2$10class, GameWindow$2$7.class and so on. Should I include all of them into the command line for the creation of the .jar file? To run my application I use java Game. So, my be I need to use only Game.class file when I create a .jar file? On the other hand other class files corresponds to classes used by the application. My software use external libraries (during compilation I specify .jar files of these libraries). Will .jar file of my application be able to run on the computer which does not contain the .jar file of used library?

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• Are Interfaces "Object"?

  - by PrashantGupta

  package inheritance; class A{ public String display(){ return "This is A!"; } } interface Workable{ public String work(); } class B extends A implements Workable{ public String work(){ return "B is working!"; } } public class TestInterfaceObject{ public static void main(String... args){ B obj=new B(); Workable w=obj; //System.out.println(w.work()); //invoking work method on Workable type reference System.out.println(w.display()); //invoking display method on Workable type reference //System.out.println(w.hashCode()); // invoking Object's hashCode method on Workable type reference } } As we know that methods which can be invoked depend upon the type of the reference variable on which we are going to invoke. Here, in the code, work() method was invoked on "w" reference (which is Workable type) so method invoking will compile successfully. Then, display() method is invoked on "w" which yields a compilation error which says display method was not found, quite obvious as Workable doesn't know about it. Then we try to invoke the Object class's method i.e. hashCode() which yields a successful compilation and execution. How is it possible? Any logical explanation?

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• What is New in ASP.NET 4.0 Code Access Security

  - by Xiaohong

  ASP.NET Code Access Security (CAS) is a feature that helps protect server applications on hosting multiple Web sites, ASP.NET lets you assign a configurable trust level that corresponds to a predefined set of permissions. ASP.NET has predefined ASP.NET Trust Levels and Policy Files that you can assign to applications, you also can assign custom trust level and policy files. Most web hosting companies run ASP.NET applications in Medium Trust to prevent that one website affect or harm another site etc. As .NET Framework's Code Access Security model has evolved, ASP.NET 4.0 Code Access Security also has introduced several changes and improvements. The main change in ASP.NET 4.0 CAS In ASP.NET v4.0 partial trust applications, application domain can have a default partial trust permission set as opposed to being full-trust, the permission set name is defined in the <trust /> new attribute permissionSetName that is used to initialize the application domain . By default, the PermissionSetName attribute value is "ASP.Net" which is the name of the permission set you can find in all predefined partial trust configuration files. <trust level="Something" permissionSetName="ASP.Net" /> This is ASP.NET 4.0 new CAS model. For compatibility ASP.NET 4.0 also support legacy CAS model where application domain still has full trust permission set. You can specify new legacyCasModel attribute on the <trust /> element to indicate whether the legacy CAS model is enabled. By default legacyCasModel is false which means that new 4.0 CAS model is the default. <trust level="Something" legacyCasModel="true|false" /> In .Net FX 4.0 Config directory, there are two set of predefined partial trust config files for each new CAS model and legacy CAS model, trust config files with name legacy.XYZ.config are for legacy CAS model: New CAS model: Legacy CAS model: web_hightrust.config legacy.web_hightrust.config web_mediumtrust.config legacy.web_mediumtrust.config web_lowtrust.config legacy.web_lowtrust.config web_minimaltrust.config legacy.web_minimaltrust.config   The figure below shows in ASP.NET 4.0 new CAS model what permission set to grant to code for partial trust application using predefined partial trust levels and policy files:    There also some benefits that comes with the new CAS model: You can lock down a machine by making all managed code no-execute by default (e.g. setting the MyComputer zone to have no managed execution code permissions), it should still be possible to configure ASP.NET web applications to run as either full-trust or partial trust. UNC share doesn’t require full trust with CASPOL at machine-level CAS policy. Side effect that comes with the new CAS model: processRequestInApplicationTrust attribute is deprecated  in new CAS model since application domain always has partial trust permission set in new CAS model.   In ASP.NET 4.0 legacy CAS model or ASP.NET 2.0 CAS model, even though you assign partial trust level to a application but the application domain still has full trust permission set. The figure below shows in ASP.NET 4.0 legacy CAS model (or ASP.NET 2.0 CAS model) what permission set to grant to code for partial trust application using predefined partial trust levels and policy files:     What $AppDirUrl$, $CodeGen$, $Gac$ represents: $AppDirUrl$ The application's virtual root directory. This allows permissions to be applied to code that is located in the application's bin directory. For example, if a virtual directory is mapped to C:\YourWebApp, then $AppDirUrl$ would equate to C:\YourWebApp. $CodeGen$ The directory that contains dynamically generated assemblies (for example, the result of .aspx page compiles). This can be configured on a per application basis and defaults to %windir%\Microsoft.NET\Framework\{version}\Temporary ASP.NET Files. $CodeGen$ allows permissions to be applied to dynamically generated assemblies. $Gac$ Any assembly that is installed in the computer's global assembly cache (GAC). This allows permissions to be granted to strong named assemblies loaded from the GAC by the Web application.   The new customization of CAS Policy in ASP.NET 4.0 new CAS model 1. Define which named permission set in partial trust configuration files By default the permission set that will be assigned at application domain initialization time is the named "ASP.Net" permission set found in all predefined partial trust configuration files. However ASP.NET 4.0 allows you set PermissionSetName attribute to define which named permission set in a partial trust configuration file should be the one used to initialize an application domain. Example: add "ASP.Net_2" named permission set in partial trust configuration file: <PermissionSet class="NamedPermissionSet" version="1" Name="ASP.Net_2"> <IPermission class="FileIOPermission" version="1" Read="$AppDir$" PathDiscovery="$AppDir$" /> <IPermission class="ReflectionPermission" version="1" Flags ="RestrictedMemberAccess" /> <IPermission class="SecurityPermission " version="1" Flags ="Execution, ControlThread, ControlPrincipal, RemotingConfiguration" /></PermissionSet> Then you can use "ASP.Net_2" named permission set for the application domain permission set: <trust level="Something" legacyCasModel="false" permissionSetName="ASP.Net_2" /> 2. Define a custom set of Full Trust Assemblies for an application By using the new fullTrustAssemblies element to configure a set of Full Trust Assemblies for an application, you can modify set of partial trust assemblies to full trust at the machine, site or application level. The configuration definition is shown below: <fullTrustAssemblies> <add assemblyName="MyAssembly" version="1.1.2.3" publicKey="hex_char_representation_of_key_blob" /></fullTrustAssemblies> 3. Define <CodeGroup /> policy in partial trust configuration files ASP.NET 4.0 new CAS model will retain the ability for developers to optionally define <CodeGroup />with membership conditions and assigned permission sets. The specific restriction in ASP.NET 4.0 new CAS model though will be that the results of evaluating custom policies can only result in one of two outcomes: either an assembly is granted full trust, or an assembly is granted the partial trust permission set currently associated with the running application domain. It will not be possible to use custom policies to create additional custom partial trust permission sets. When parsing the partial trust configuration file: Any assemblies that match to code groups associated with "PermissionSet='FullTrust'" will run at full trust. Any assemblies that match to code groups associated with "PermissionSet='Nothing'" will result in a PolicyError being thrown from the CLR. This is acceptable since it provides administrators with a way to do a blanket-deny of managed code followed by selectively defining policy in a <CodeGroup /> that re-adds assemblies that would be allowed to run. Any assemblies that match to code groups associated with other permissions sets will be interpreted to mean the assembly should run at the permission set of the appdomain. This means that even though syntactically a developer could define additional "flavors" of partial trust in an ASP.NET partial trust configuration file, those "flavors" will always be ignored. Example: defines full trust in <CodeGroup /> for my strong named assemblies in partial trust config files: <CodeGroup class="FirstMatchCodeGroup" version="1" PermissionSetName="Nothing"> <IMembershipCondition    class="AllMembershipCondition"    version="1" /> <CodeGroup    class="UnionCodeGroup"    version="1"    PermissionSetName="FullTrust"    Name="My_Strong_Name"    Description="This code group grants code signed full trust. "> <IMembershipCondition      class="StrongNameMembershipCondition" version="1"       PublicKeyBlob="hex_char_representation_of_key_blob" /> </CodeGroup> <CodeGroup   class="UnionCodeGroup" version="1" PermissionSetName="ASP.Net">   <IMembershipCondition class="UrlMembershipCondition" version="1" Url="$AppDirUrl$/*" /> </CodeGroup> <CodeGroup class="UnionCodeGroup" version="1" PermissionSetName="ASP.Net">   <IMembershipCondition class="UrlMembershipCondition" version="1" Url="$CodeGen$/*"   /> </CodeGroup></CodeGroup>   4. Customize CAS policy at runtime in ASP.NET 4.0 new CAS model ASP.NET 4.0 new CAS model allows to customize CAS policy at runtime by using custom HostSecurityPolicyResolver that overrides the ASP.NET code access security policy. Example: use custom host security policy resolver to resolve partial trust web application bin folder MyTrustedAssembly.dll to full trust at runtime: You can create a custom host security policy resolver and compile it to assembly MyCustomResolver.dll with strong name enabled and deploy in GAC: public class MyCustomResolver : HostSecurityPolicyResolver{ public override HostSecurityPolicyResults ResolvePolicy(Evidence evidence) { IEnumerator hostEvidence = evidence.GetHostEnumerator(); while (hostEvidence.MoveNext()) { object hostEvidenceObject = hostEvidence.Current; if (hostEvidenceObject is System.Security.Policy.Url) { string assemblyName = hostEvidenceObject.ToString(); if (assemblyName.Contains(“MyTrustedAssembly.dll”) return HostSecurityPolicyResult.FullTrust; } } //default fall-through return HostSecurityPolicyResult.DefaultPolicy; }} Because ASP.NET accesses the custom HostSecurityPolicyResolver during application domain initialization, and a custom policy resolver requires full trust, you also can add a custom policy resolver in <fullTrustAssemblies /> , or deploy in the GAC. You also need configure a custom HostSecurityPolicyResolver instance by adding the HostSecurityPolicyResolverType attribute in the <trust /> element: <trust level="Something" legacyCasModel="false" hostSecurityPolicyResolverType="MyCustomResolver, MyCustomResolver" permissionSetName="ASP.Net" />   Note: If an assembly policy define in <CodeGroup/> and also in hostSecurityPolicyResolverType, hostSecurityPolicyResolverType will win. If an assembly added in <fullTrustAssemblies/> then the assembly has full trust no matter what policy in <CodeGroup/> or in hostSecurityPolicyResolverType.   Other changes in ASP.NET 4.0 CAS Use the new transparency model introduced in .Net Framework 4.0 Change in dynamically compiled code generated assemblies by ASP.NET: In new CAS model they will be marked as security transparent level2 to use Framework 4.0 security transparent rule that means partial trust code is treated as completely Transparent and it is more strict enforcement. In legacy CAS model they will be marked as security transparent level1 to use Framework 2.0 security transparent rule for compatibility. Most of ASP.NET products runtime assemblies are also changed to be marked as security transparent level2 to switch to SecurityTransparent code by default unless SecurityCritical or SecuritySafeCritical attribute specified. You also can look at Security Changes in the .NET Framework 4 for more information about these security attributes. Support conditional APTCA If an assembly is marked with the Conditional APTCA attribute to allow partially trusted callers, and if you want to make the assembly both visible and accessible to partial-trust code in your web application, you must add a reference to the assembly in the partialTrustVisibleAssemblies section: <partialTrustVisibleAssemblies> <add assemblyName="MyAssembly" publicKey="hex_char_representation_of_key_blob" />/partialTrustVisibleAssemblies>   Most of ASP.NET products runtime assemblies are also changed to be marked as conditional APTCA to prevent use of ASP.NET APIs in partial trust environments such as Winforms or WPF UI controls hosted in Internet Explorer.   Differences between ASP.NET new CAS model and legacy CAS model: Here list some differences between ASP.NET new CAS model and legacy CAS model ASP.NET 4.0 legacy CAS model  : Asp.net partial trust appdomains have full trust permission Multiple different permission sets in a single appdomain are allowed in ASP.NET partial trust configuration files Code groups Machine CAS policy is honored processRequestInApplicationTrust attribute is still honored    New configuration setting for legacy model: <trust level="Something" legacyCASModel="true" ></trust><partialTrustVisibleAssemblies> <add assemblyName="MyAssembly" publicKey="hex_char_representation_of_key_blob" /></partialTrustVisibleAssemblies>   ASP.NET 4.0 new CAS model: ASP.NET will now run in homogeneous application domains. Only full trust or the app-domain's partial trust grant set, are allowable permission sets. It is no longer possible to define arbitrary permission sets that get assigned to different assemblies. If an application currently depends on fine-tuning the partial trust permission set using the ASP.NET partial trust configuration file, this will no longer be possible. processRequestInApplicationTrust attribute is deprecated Dynamically compiled assemblies output by ASP.NET build providers will be updated to explicitly mark assemblies as transparent. ASP.NET partial trust grant sets will be independent from any enterprise, machine, or user CAS policy levels. A simplified model for locking down web servers that only allows trusted managed web applications to run. Machine policy used to always grant full-trust to managed code (based on membership conditions) can instead be configured using the new ASP.NET 4.0 full-trust assembly configuration section. The full-trust assembly configuration section requires explicitly listing each assembly as opposed to using membership conditions. Alternatively, the membership condition(s) used in machine policy can instead be re-defined in a <CodeGroup /> within ASP.NET's partial trust configuration file to grant full-trust.   New configuration setting for new model: <trust level="Something" legacyCASModel="false" permissionSetName="ASP.Net" hostSecurityPolicyResolverType=".NET type string" ></trust><fullTrustAssemblies> <add assemblyName=”MyAssembly” version=”1.0.0.0” publicKey="hex_char_representation_of_key_blob" /></fullTrustAssemblies><partialTrustVisibleAssemblies> <add assemblyName="MyAssembly" publicKey="hex_char_representation_of_key_blob" /></partialTrustVisibleAssemblies>     Hope this post is helpful to better understand the ASP.Net 4.0 CAS. Xiaohong Tang ASP.NET QA Team

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