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  • Get coordinates of beads covering the surface of a protein

    - by Hefeweizen
    Given a protein structure from the PDB, I would like to generate NS spheres of radius Rs which cover totally the protein surface. Given RS there, NS is the maximum number of spheres so they do not overlap. I would need the coordinates of the center of each sphere. Does anybody know if this has been implemented in some method / program? Or how to do it with scripting. Thanks

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  • Recomendations for Creating a Picture Slide Show with Super-Smooth Transitions (For Live Presentaito

    - by Nick
    Hi everyone, I'm doing a theatrical performance, and I need a program that can read images from a folder and display them full screen on one of the computer's VGA outputs, in a predetermined order. All it needs to do is start with the first image, and when a key is pressed (space bar, right arrow), smoothly cross-fade to the next image. Sounds just like power-point right? The only reason why I can use power-point/open-office is because the "fade smoothly" transition isn't smooth enough, or configurable enough. It tends to be fast and choppy, where I would like to see a perfectly smooth fade over, say, 30 seconds. So the question is what is the best (cheap and fast) way to accomplish this? Is there a program that already does this well (for cheap or free)? OR should I try to hack at open-office's transition code? Or would it be easier to create this from scratch? Are there frameworks that might make it easier? I have web programming experience (php), but not desktop or real-time rendering. Any suggestions are appreciated!

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  • Best strategies for reading J code

    - by estanford
    I've been using J for a few months now, and I find that reading unfamiliar code (e.g. that I didn't write myself) is one of the most challenging aspects of the language, particularly when it's in tacit. After a while, I came up with this strategy: 1) Copy the code segment into a word document 2) Take each operator from (1) and place it on a separate line, so that it reads vertically 3) Replace each operator with its verbal description in the Vocabulary page 4) Do a rough translation from J syntax into English grammar 5) Use the translation to identify conceptually related components and separate them with line breaks 6) Write a description of what each component from (5) is supposed to do, in plain English prose 7) Write a description of what the whole program is supposed to do, based on (6) 8) Write an explanation of why the code from (1) can be said to represent the design concept from (7). Although I learn a lot from this process, I find it to be rather arduous and time-consuming -- especially if someone designed their program using a concept I never encountered before. So I wonder: do other people in the J community have favorite ways to figure out obscure code? If so, what are the advantages and disadvantages of these methods?

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  • svn checkout issue....

    - by Ramesh
    Is there a way to create a working copy with all child folders but with out files in it. My repo is very big, I only need the empty directory structure to be created.

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  • Using .htaccess to change my website URLs

    - by James P
    I have some pages organised like this: http://localhost/index.html http://localhost/download.html http://localhost/contact.html And I need them changed to suit the following URL structure: http://localhost/ http://localhost/download http://localhost/contact Without making sub directories and putting in pages as index.html. As far as I know .htaccess can be used for this, but I have no idea what I need to add to my .htaccess file to make this work. Can anyone provide some help? Thanks.

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  • T-SQL Query to Get SUM(COUNT())

    - by Ted
    Hi, I am planning to get a report for a table with following table structure: ID RequestDate ----------------------------- 1 2010/01/01 2 2010/02/14 3 2010/03/20 4 2010/01/07 5 2009/03/31 I want the results as: I D_Count RequestDate Sum ----------------------------------------- 2 2010/01 2 1 2010/02 3 2 2010/03 5 Pls help.

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  • Getting a loop when using link_to :back

    - by onildo
    I have this structure for the table course: Search page - Result Page - Edit Page - Show page When i go from result page to a specific course edit page, i edit it, and end up on the show page, but when i hit back, i get a loop from show to edit, and back to show and so on. I want the edit page to back to the result page if it came from there. im using this on both: <%= link_to "Back", :back %>

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  • txt file read/overwrite/append. Is this feasible? (Visual C#)

    - by Arcadian
    Hi, I'm writing a program for some data entry I have to periodically do. I have begun testing a few things that the program will have to do but i'm not sure about this part. What i need this part to do is: read a .txt file of data take the first 12 characters from each line take the first 12 characters from each line of the data that has been entered in a multi-line text box compare the two lists line by line if one of the 12 character blocks from the multi-line text box match one of the blocks in the .txt file then overwrite that entire line (only 17 characters in total) if one of the 12 character blocks from the multi-line text box DO NOT match any of the blocks in the.txt file then append that entire line to the file thats all it has to do. i'll do an example: TXT FILE: G01:78:08:32 JG05 G08:80:93:10 JG02 G28:58:29:28 JG04 MULTI-LINE TEXT BOX: G01:78:08:32 JG06 G28:58:29:28 JG03 G32:10:18:14 JG01 G32:18:50:78 JG07 RESULTING TXT FILE: G01:78:08:32 JG06 G08:80:93:10 JG02 G28:58:29:28 JG03 G32:10:18:14 JG01 G32:18:50:78 JG07 as you can see lines 1 and 3 were overwriten, line 2 was left alone as it did not match any blocks in the text box, lines 4 and 5 were appended to the file. thats all i want it to do. How do i go about this? Thanks in advance

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  • Purpose of PHP constructors

    - by Bharanikumar
    Hi, I am working with classes and object class structure, but not at a complex level – just classes and functions, then, in one place, instantiation. As to __construct and __destruct, please tell me very simply: what is the purpose of constructors and destructors? I know the school level theoretical explanation, but i am expecting something like in real world, as in which situations we have to use them. Provide also an example, please. Regards

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  • purpose of php consutructor

    - by Bharanikumar
    Hi , Am working in the classes and object class structure , but not extream level , Just class and function , then in one place instantiation . that's it , not much big functions like __construct etc , Please tell me very simply , 1.what is th purpose of constructor ad destructor , But i know theoretical explanation school level , But i am expecting something like in real time , which situation we have to use, and is there any example for that please tell me, Regards

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  • java:25: '.class' expected error while merging arrays

    - by user3677712
    Here is my code, it is asking me to call a class, I am confused as to do this. Noob to java, so any help would be greatly appreciated. line 25 is where the error occurs. This program is merging two arrays together into a new array. public class Merge{ public static void main(String[] args){ int[] a = {1, 1, 4, 5, 7}; int[] b = {2, 4, 6, 8}; int[] mergedArray = merge(a, b); for(int i = 0; i < mergedArray.length; i++){ System.out.print(mergedArray[i] + " "); } } public static int[] merge(int[] a, int[] b){ // WRITE CODE HERE int[] mergedArray = new int[a.length[] + b.length[]]; int i = 0, j = 0, k = 0; while (i < a.length() && j < b.length()) //error occurs at this line { if (a[i] < b[j]) { mergedArray[k] = a[i]; i++; } else { mergedArray[k] = b[j]; j++; } k++; } while (i < a.length()) { mergedArray[k] = a[i]; i++; k++; } while (j < b.length()) { mergedArray[k] = b[j]; j++; k++; } return mergedArray; } } This program is merging two arrays together into a new array.

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  • Best Methods for Dynamically Creating New Objects

    - by frankV
    I'm looking for a method to dynamically create new class objects during runtime of a program. So far what I've read leads me to believe it's not easy and normally reserved for more advanced program requirements. What I've tried so far is this: // create a vector of type class vector<class_name> vect; // and use push_back (method 1) vect.push_back(*new Object); //or use for loop and [] operator (method 2) vect[i] = *new Object; neither of these throw errors from the compiler, but I'm using ifstream to read data from a file and dynamically create the objects... the file read is taking in some weird data and occasionally reading a memory address, and it's obvious to me it's due to my use/misuse of the code snippet above. The file read code is as follows: // in main ifstream fileIn fileIn.open( fileName.c_str() ); // passes to a separate function along w/ vector loadObjects (fileIn, vect); void loadObjects (ifstream& is, vector<class_name>& Object) { int data1, data2, data3; int count = 0; string line; if( is.good() ){ for (int i = 0; i < 4; i++) { is >> data1 >> data2 >> data3; if (data1 == 0) { vect.push_back(*new Object(data2, data3) ) } } } }

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  • Unit Conversion from feet to meters

    - by user1742419
    I have to write a program that reads in a length in feet and inches and outputs the equivalent length in meters and centimeters. I have to create three functions: one for input, one or more for calculating, and one for output; And include a loop that lets the user repeat this computation for new input values until the user says he or she wants to end the program. I can't seem to get the input from one function to be used in the conversion function and then outputted by the next function. How do I do that? Thank you. #include <iostream> #include <conio.h> using namespace std; double leng; void length(double leng); double conv(double leng); void output(double leng); int main() { length(leng); conv(leng); output(leng); _getche(); return 0; } void length(double leng) { cout<<"Enter a length in feet, then enter a length in inches if needed: "; cin>>leng; return; } double conv(double leng) { return leng = leng * .3048; } void output(double leng) { cout<<"Your input is converted to "<<leng; return; }

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  • Separate "include" and "src" folders for application-level code?

    - by StackedCrooked
    This questions concerns mostly Unix/Linux style C++ development. I see that many C++ libraries store their header files in a "include" folder and source files in an "src" folder. For the sake of conformance I adopted this in my own code. But it is not clear to me whether this should be done for application code as well. I've seen a few cases where a flat directory structure is used for that. What would be the recommended approach?

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  • php fetch user data from mysql

    - by milodinosaur
    hi, currently i have 2 table in mysql structure: messages id | content | user_id | time submessages id | subcontent | msg_id | user_id | time submessages msg_id is FK for messages id. Now i need to query from php $cur_user = $user->current; // current user id. SELECT * FROM messages WHERE id > '{$_GET['id']}' // problem here how do i query submessages that posted by others not include current user? thank you.

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  • Generate data in Excel using Macros?

    - by RD
    I need to create a table with the following structure: Applicant | Test 1 | Test 2 | Test 3 | Test 4 | Test 5 | Test 6 | 1 | A | C | D | E | F | B | 2 | C | B | A | E | D | F | 3 | C | A | F | G | B | D | .... | | | | | | | Basically, test 1 - 6 can be any letter between A and F. I want a Macro (or some other method) by which I can generate this table, with 200 applicants, where the tests are completely randomised. Anyone know how to do this?

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  • Restructuring the xml when reading

    - by Sathish
    Hi I am converting a dataset to xml and reading the xml file by dataset.readxml method and showing it in the grid and it appears as shown below. Now i wanted to read this in pivoted format like the second structure without using loops F1 F2 F3 F4 F5 Group 1 2 3 4 Design 5 6 7 8 F1 Value Group 1 Group 2 Group 3 Group 4 Design 5 Design 6 Design 7 Design 8

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