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• Tool used to retrieve code metrics in xUnit Test Patterns?

  - by leeand00

  I'm reading xUnit Test Patterns by Gerard Meszaros. On one of the pages he refers to some software metrics: While the need to wrap lines to keep them at 65 characters makes this code look even longer than it really is, it is still unnecessarily long. It contains 25 executable statements including initialized declarations, 6 lines of control statements, 4 in-line comments, and 2 lines to declare the test method—giving a total of 37 lines of unwrapped source code. Short of counting the statements to find these metrics, does anybody have any idea if he used a particular tool to calculate the metrics? (If you have any suggestions for tools that will count similar metrics, I'm looking for one that works on Java, Javascript and C++) Thanks!

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• 50 sequences in one line

  - by user343934

  I have Muttiple sequence alignment (clustal) file and i want to read this file and arrange sequences in a such a way that in looks more clear and precise in order. I am doing this from biopython using AlignIO object. My codes like this alignment = AlignIO.read("opuntia.aln", "clustal") print "Number of rows: %i" % len(align) for record in alignment: print "%s - %s" % (record.id, record.seq) My Output-- http://i48.tinypic.com/ae48ew.jpg , it looks messy and long scrolling. What i want to do is print only 50 sequences in each line and continue till the end of alignment file. I wish to have output like this---http://i45.tinypic.com/4vh5rc.jpg from --http://www.ebi.ac.uk/Tools/clustalw2/, sorry two links are just a text due to my reputation. Any suggestions, algorithm and sample code is appreciated Thanks in advance Br,

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• Python Desktop Application with the Browser as an interface?

  - by Eli

  I want to create an application that runs on the users computer, a stand-alone application, with installation and what-not, but I want the interface to be a browser, either internal and displayed as an OS window or external accessible using the browser (i.e. some http server). The reason would be because I know a little about Python, but I think I can manage as long as I have some basic roots that I can use and manipulate, and those would be HTML, CSS, and Javascript. I've yet to find a good GUI tool which I can use, and always abandon the idea after trying to mess around and eventually not getting anything.

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• Loading...Please wait for UIWebView - iPhone

  - by niha7229

  Hi guys, In Safari and other browsers, there is a bar that would indicate the percentage of the loading progress, and I, myself, trying to implement something similiar on iPhone, when loading some content in UIWebView, I would like the app to indicate the percentage of the page being loaded. I tried some google search and realize we could use NSURLConnection to read only the header and get the Content-Length ( but don't know how to, I read the Apple's NSURLConnection docs but probably I missed something ... ). And the size ( kb ) which UIWebView had loaded, seem like UIWebView don't support it for the public API... I hope this would be complete in some other ways than I thought, so if you have any ideas, please throw it out, thanks for your patient reading. P.S : I could just show an Activities Indicator for users with the long loading progress actions of the UIWebView but I just want to go further with the loading percentage bar :). Regards.

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• How to run only the latest/a given test using Rspec?

  - by marcgg

  Let's say I have a big spec file with 20 tests because I'm testing a large model and I had no other way of doing it : describe Blah it "should do X" do ... end it "should do Y" do ... end ... it "should do Z" do ... end end Running a single file is faster than running the whole test suite, but it's still pretty long. Is there a way to run the last one (ie the one at the end of the file, here "should do Z")? If this is not possible, is there a way to specify which test I want to run in my file ?

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• Force line-buffering of stdout when piping to tee

  - by houbysoft

  Usually, stdout is line-buffered. In other words, as long as your printf argument ends with a newline, you can expect the line to be printed instantly. This does not appear to hold when using a pipe to redirect to tee. I have a C++ program, a, that outputs strings, always \n-terminated, to stdout. When it is run by itself (./a), everything prints correctly and at the right time, as expected. However, if I pipe it to tee (./a | tee output.txt), it doesn't print anything until it quits, which defeats the purpose of using tee. I know that I could fix it by adding a fflush(stdout) after each printing operation in the C++ program. But is there a cleaner, easier way? Is there a command I can run, for example, that would force stdout to be line-buffered, even when using a pipe?

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• MySQL PHP incompatibility.

  - by Evernoob

  Ok maybe I've overlooked something really simple here, but I can't seem to figure this out. I'm running WAMP locally, but connecting to a remote MySQL database. The local version of PHP is the latest 5.3.0. One of the remote databases, being version 5.0.45 works fine. However, the other remote database I'm trying to connect to, which is version 5.0.22 throws the following error before dying: Warning: mysql_connect() [function.mysql-connect]: OK packet 6 bytes shorter than expected. PID=5880 in ... Warning: mysql_connect() [function.mysql-connect]: mysqlnd cannot connect to MySQL 4.1+ using old authentication in ... WTF? UPDATE: Reverting to PHP 5.2.* i.e. anything lower than 5.3.0 resolves the problem completely. As long as I am not running 5.3.0 I can connect to both databases. I'm not sure what the explanation is for this weirdness.

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• Combining regroup with get_foo_display in Django templates

  - by shacker

  I'm using the regroup template tag to group queryset output on a Choices field. In the model: RESOURCE_TYPES = ( ('tut','External tutorial'), ('read','Additional reading'), ('org','Company or organization'), ) restype = models.CharField('Resource type',max_length=6,choices=RESOURCE_TYPES) in the view: resources = Resource.objects.filter(tutorial=tutorial) in the template: {% regroup resources by restype as resource_list %} {% for type in resource_list %} <h3>{{type.grouper}}</h3> So type.grouper renders as 'tut' or 'org' on the page, rather than the long form. Normally you would use the get_foo_display syntax to get at the value of the choice, rather than the key. But the value doesn't seem to be available after going through regroup. There's no way I can find to use get_foo_display on {{type.grouper}}. It makes sense when you think about it, but what's the workaround? Thanks.

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• what's the UNC path for local computer from a remote machine ?

  - by KaluSingh Gabbar

  I am writing a small utility program in IronPython to install applications on remote machine using managementclass which uses WMI. Now, the script would install an application on Machine_B from Machine_A, it works fine as long as you have the msi file on the local drive of the Target machine (Machine_B, in this case). I want to be able to do same thing with .msi file being on the Host (Machine_A) machine. network_scope = r"\\%Machine_B\root\cimv2" scope = ManagementScope(network_scope, options) scope.Connect() mp = ManagementPath("Win32_Product") ogo = ObjectGetOptions() mc = ManagementClass(scope, mp, ogo) inParams = mc.GetMethodParameters ("Install") inParams["PackageLocation"] = r"C:\installs\python-3.1.1.msi" inParams["AllUsers"] = True retVal = mc.InvokeMethod ("Install", inParams, None) print retVal ["ReturnValue"].ToString() PROBLEM : [Machine A] --- Where I am running the script, and want to host the .msi file [Machine B] --- where I want to install the application So, How can I define the UNC path for local machine ? what will be inParams["PackageLocation"] = ??

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• PHP upload with progress bar

  - by Mitchan Adams

  Hi all I want to create an upload form to upload large files. Thats pretty much easy, however, the upload process itself taks long and basically looks like nothing is happening for a few minutes. So now I'd like to insert a progress bar to show the user that something is happening and they should just sit tight. I've read of numerous methods like APC and certian flash plugins, but my site is hosted on a shared server and I cant install any new applications on it. I'm thinking, maybe if it is possible to read the size of the temp file it creates via an ajax page. By polling the size every few seconds I should be able to get the progress of the upload. Now the question I pose is...where is the temp file situated?

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• jquery cookie - hoursToLive

  - by mathiregister

  Hi guys, i'm using the jquery cookie plugin. Everything works fine except the fact that I have no idea how to set an expiration-time for the cookie? $.cookie('opt_visible', 'true'); the jquery-cookie documentation says: hoursToLive (DEPRECATED for expiresAt) NUMBER For how many hours should the cookie be valid? (Passing 0 means to delete the cookie at the end of the browser session--this is default. Negative values will delete the cookie, but you should use the del() method instead.) That's exactly what I'd like to have. The cookie should be available as long as i'm browsing the site. As soon as i close the window or browsertab, the cookie should be deleted. How can i implement this hoursToLive thingy to my mentioned line above? Thank you

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• jQuery: Self Executing Plugin?

  - by GnrlBzik

  I am working on expansion of my jQuery plug-in authoring knowledge, just playing around with my own ideas for learning benefits. So i was wondering how you guys tackle the need of plugin executing without any user specific input. So I have a need for plug-in that executes right away after document is ready, without any user's specific input just as long as doc is loaded, so the only way I see how to execute plug-in on it's own is to attach handler to ready listener that executes my function which I extended the jQuery with. And because this needs to be self enclosed, part of the code, I attach handler to event listener within the function. So how else could one tackle this? Any take at this is appreciated. Thank you in advance everyone.

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• How do I display data in a table and allow users to copy selected data?

  - by cfouche

  Hi I have a long list of data that I want to display in table format to users. The data changes when the user performs certain actions in my app, but it is not directly editable. So the user can create a reasonably big table of data, but he can't change individual cells' values. However, I do want the data to be copy-able. So I want it to be possible for the user to select some or all of the cells, and do a ctrl-C to copy the data to his clipboard, and then a ctrl-V to paste the data to an external text editor. At the moment, I'm displaying the data in a ListView with a GridView and this works perfectly, except that GridView doesn't allow one to copy data. What other options can I try? Ours is a WPF app, coding in c#.

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• Setting up a Git remote with a truncated history

  - by drg

  I am in the midst of doing some non-standard, probably doomed, experiments on a git repository. The goal is to create a remote repository with a truncated history which can still share commits with an internal repository which has a full history. I've had some success using a graft to connect the public history with the private history - when I push from my internal repository, only the post-graft contents are included. So my main question is: what is the simplest way of taking a commit, eliminating its parent and writing a graft in place of the parent? A more general question: is what I'm trying to do going to cause me pain in the long run, do you know if there's a better way?

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• R: How to pass a list of selection expressions (strings in this case) to the subset function?

  - by John

  Here is some example data: data = data.frame(series = c("1a", "1b", "1e"), reading = c(0.1, 0.4, 0.6)) > data series reading 1 1a 0.1 2 1b 0.4 3 1e 0.6 Which I can pull out selective single rows using subset: > subset (data, series == "1a") series reading 1 1a 0.1 And pull out multiple rows using a logical OR > subset (data, series == "1a" | series == "1e") series reading 1 1a 0.1 3 1e 0.6 But if I have a long list of series expressions, this gets really annoying to input, so I'd prefer to define them in a better way, something like this: series_you_want = c("1a", "1e") (although even this sucks a little) and be able to do something like this, subset (data, series == series_you_want) The above obviously fails, I'm just not sure what the best way to do this is?

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• What application domains are CPU bound and will tend to benefit from multi-core technologies?

  - by Glomek

  I hear a lot of people talking about the revolution that is coming in programming due to multi-core processors and parallelism, but I can't shake the feeling that for most of us, CPU cycles aren't the bottleneck. Pretty much all of my programs have been I/O bound in one way or another (database, filesystem, network, user interaction, etc.) for a very long time. Now I can think of a few areas where CPU cycles are a limiting factor, like code breaking, graphics, sound, some forms of simulation (weather, physics, etc.), and some forms of mathematical research, but they all seem like fairly specialized application domains. My general impression is that most programs are still I/O bound and that for most of our industry CPUs have been plenty fast for quite a while now. Am I off my rocker? What other application domains are CPU bound today? Do any of them include a large portion of the programming population? In essence, I'm wondering whether the multi-core CPUs will impact very many of us, and if so, how?

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• Should I convert overlong UTF-8 strings to their shortest normal form?

  - by Grant McLean

  I've just been reworking my Encoding::FixLatin Perl module to handle overlong UTF-8 byte sequences and convert them to the shortest normal form. My question is quite simply "is this a bad idea"? A number of sources (including this RFC) suggest that any over-long UTF-8 should be treated as an error and rejected. They caution against "naive implementations" and leave me with the impression that these things are inherently unsafe. Since the whole purpose of my module is to clean up messy data files with mixed encodings and convert them to nice clean utf8, this seems like just one more thing I can clean up so the application layer doesn't have to deal with it. My code does not concern itself with any semantic meaning the resulting characters might have, it simply converts them into a normalised form. Am I missing something. Is there a hidden danger I haven't considered?

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• PHP MVC correct usage

  - by Ratt

  What is the correct (recommended method) for passing information to a view in a MVC environment. Currently we use Zend Framework, where we write classes to handle specific things EG a Book class with a save and load method to retrieve info from the DB, which is called from a particular nameAction(). What I would like to know is what is the best way to pass this information to the view, in some cases we do $this-view-book_name = $book-getBookName(); and in other cases we do the following $this-view-book = $book; OR $this-view-books = Book_Manager::getAllBooks(); and then access the object(s) properties in the view. Information on-line suggests we try limit what access a view has to information, i.e pass them only what they need and in some cases people say its ok to pass stuff through as long as nothing is done to that information. Regards

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• Boolean Code Clarity - which style to use? [closed]

  - by Anonymous

  I was wondering what style others' use when writing conditional statements that include boolean types. Currently I'm caught between using two styles. bool foo; if (foo == true) if (foo) if (foo == false) if (!foo) Obviously the first set is a bit more obvious. However, when combining conditions it could get a bit clunky. if (foo == true || blah == false || abc == true) if (foo || !blah || abc) Switching between one style for short conditionals and the other for long conditionals seems like inconsistent coding so it seems like I'd have to choose between one or the other. What do you prefer or consider better style and why?

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• Does any faster centralized version control than SVN exists?

  - by Savageman

  Hello, I've been using SVN since a long time and now we're trying on Git. I'm not talking on the centralized / decentralized debate here. My only concern is speed. The latter tool is much faster. But sometimes, I NEED to work with a centralized approach, which is much more simple and less complex than the decentralized one. The learning curve is really fast, which saves a lot of time (while digging into decentralized would lead to a waste of time, given the learning curve is much longer and we encounter more problem when working with it). However, SVN is really slow compared to GIT, and I don't think it has anything to do with the centralized argument. Decentralized systems also have to deal with server connections and file transfert. So I can easilly imagine a faster implementation of centralized version control could exists. Does someone has any clue on this?

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• How to play multiple online videos on IOS continuously

  - by Matt.Z

  The scenario is like this: I have some long video, and slice it into small files(mp4, for example: 5 min per file), put them under some website. I wanna play (on IOS) these mp4 videos continuously, one by one, try to do not let user feel there has a pause between video pieces. So I need to buffer next video when I play current one. But I don't know where to start. What should I do? Can anyone give me some information of related documentation or source code I can study with?

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• Grails: Querying Associations causes groovy.lang.MissingMethodException

  - by Paul

  Hi, I've got an issue with Grails where I have a test app with: class Artist { static constraints = { name() } static hasMany = [albums:Album] String name } class Album { static constraints = { name() } static hasMany = [ tracks : Track ] static belongsTo = [artist: Artist] String name } class Track { static constraints = { name() lyrics(nullable: true) } Lyrics lyrics static belongsTo = [album: Album] String name } The following query (and a more advanced, nested association query) works in the Grails Console but fails with a groovy.lang.MissingMethodException when running the app with 'run-app': def albumCriteria = tunehub.Album.createCriteria() def albumResults = albumCriteria.list { like("name", receivedAlbum) artist { like("name", receivedArtist) } // Fails here maxResults(1) } Stacktrace: groovy.lang.MissingMethodException: No signature of method: java.lang.String.call() is applicable for argument types: (tunehub.LyricsService$_getLyrics_closure1_closure2) values: [tunehub.LyricsService$_getLyrics_closure1_closure2@604106] Possible solutions: wait(), any(), wait(long), each(groovy.lang.Closure), any(groovy.lang.Closure), trim() at tunehub.LyricsService$_getLyrics_closure1.doCall(LyricsService.groovy:61) at tunehub.LyricsService$_getLyrics_closure1.doCall(LyricsService.groovy) (...truncated...) Any pointers?

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• How to flush data in php and disconnect user but keep the script alive

  - by Rodrigo

  This is a trick question, while developing a php+ajax application i felt into some long queries, nothing wrong with them, but they could be done in background. I know that there's a way to just send a reply to user while throwing the real processing to another process by exec(), however it dosen't feels right for me, this might generate exploits and it's not pratical on making it compatible with virtual servers and cross platform. PHP offers the ob_* functions although they help on flushing the cache, but the user will keep connected until the script is running. I'm wondering if there's an alternate to exec to keep a script running after sending data to user and closing connection/thread with apache, or a less "dirty" way to have processing data sent to another script.

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• Can I "inherit" a delegate? Looking for ways to combine Moq and MSpec without conflicts around It...

  - by Tomas Lycken

  I have started to use MSpec for BDD, and since long ago I use Moq as my mocking framework. However, they both define It, which means I can't have using Moq and using Machine.Specifications in the same code file without having to specify the namespace explicitly each time I use It. Anyone who's used MSpec knows this isn't really an option. I googled for solutions to this problem, and this blogger mentions having forked MSpec for himself, and implemented paralell support for Given, When, Then. I'd like to do this, but I can't figure out how to declare for example Given without having to go through the entire framework looking for references to Establish, and changing code there to match that I want either to be OK. For reference, the Establish, Because and It are declared in the following way: public delegate void Establish(); public delegate void Because(); public delegate void It(); What I need is to somehow declare Given, so that everywhere the code looks for an Establish, Given is also OK.

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• Embarrassingly parallel workflow creates too many output files

  - by Hooked

  On a Linux cluster I run many (N > 10^6) independent computations. Each computation takes only a few minutes and the output is a handful of lines. When N was small I was able to store each result in a separate file to be parsed later. With large N however, I find that I am wasting storage space (for the file creation) and simple commands like ls require extra care due to internal limits of bash: -bash: /bin/ls: Argument list too long. Each computation is required to run through a qsub scheduling algorithm so I am unable to create a master program which simply aggregates the output data to a single file. The simple solution of appending to a single fails when two programs finish at the same time and interleave their output. I have no admin access to the cluster, so installing a system-wide database is not an option. How can I collate the output data from embarrassingly parallel computation before it gets unmanageable?

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