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• Embarrassingly parallel workflow creates too many output files

  - by Hooked

  On a Linux cluster I run many (N > 10^6) independent computations. Each computation takes only a few minutes and the output is a handful of lines. When N was small I was able to store each result in a separate file to be parsed later. With large N however, I find that I am wasting storage space (for the file creation) and simple commands like ls require extra care due to internal limits of bash: -bash: /bin/ls: Argument list too long. Each computation is required to run through a qsub scheduling algorithm so I am unable to create a master program which simply aggregates the output data to a single file. The simple solution of appending to a single fails when two programs finish at the same time and interleave their output. I have no admin access to the cluster, so installing a system-wide database is not an option. How can I collate the output data from embarrassingly parallel computation before it gets unmanageable?

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• Learning networking fundamentals

  - by bplus

  Not having a CS degree has left large holes in my programming related knowledge. In particular I'd really like to learn some of the computer networking stuff I would have got in a good CS degree. The problem I really have is "not knowing what I don't know". So far I know I don't know anything about the following (as far as computer networks are concearned) -sockets -ports -internet protocol (the whole IP stack I keep hearing about). Can anyone add more to the list? Can anyone suggest a project (writing a toy web server?) Thanks in advance

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• Unresponsive UI when using BeginInvoke

  - by Kazoom

  Bckground I have a networked application written in C#. my server program has a UI and several communication threads, that read from tcp sockets and display messages on controller UI. Communication with each client is done through a seprate thread. When i recieve some stream of messages from one client , the thread for that client writes on UI, which is a richtextbox on a Form. I call SetTextHelper(string text) method of the form. which looks like this private delegate void MyTextUpdateHandler(string text); public void SetTextHelper(string text) { BeginInvoke(new MyTextUpdateHandler(SetText), new object[] { text }); } public setText(string text) { richtext.Text= text; } Question - If i use BeginInvoke my UI is entirely unresponsive when i m writing large stream of data to UI - Invoke solves that problem, but i read that for multi threaded environment where many thereads are sharing same resource Invoke can lead to deadlocks I share the common ichtextbox between around 16 threads - What would be a good desing for my situation?

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• OOP App Architecture: Which layer does a lazy loader sit in?

  - by JW

  I am planning the implemention an Inheritance Mapper pattern for an application component http://martinfowler.com/eaaCatalog/inheritanceMappers.html One feature it needs to have is for a domain object to reference a large list of aggreageted items (10,000 other domain objects) So I need some kind of lazy loading collection to be passed out of the aggregate root domain object to other domain objects. To keep my (php) model scripts organised i am storing them in two folders: MyComponent\ controllers\ models\ domain\ <- domain objects, DDD repository, DDD factory daccess\ <- PoEAA data mappers, SQL queries etc views\ But now I am racking my brains wondering where my lazy loading collection sits. Any suggestions / justifications for putting it in one place over another another? DDD = Domain Driven Design Patterns, Eric Evans - book PoEAA = Patterns of Application Architecture Patterns, Martin Fowler - book

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• Creating a PHP call home "time bomb" to protect my interests

  - by RC

  Hi everyone, I produced a PHP web app for a client some months back that is hosted on their own server. I have still not been paid for this work, and they are giving me the runaround. It turns out that I still have remote admin access to their server, so I can make code changes. What I was thinking of doing was to move the core kernel off-site onto one of my own servers, and program in some kind of callback or include that gets the kernel (critical functions) from my server. Give it two weeks or so for their backups to catch this change, and then pull the plug and exercise leverage. If I do this, they will pay immediately, because the site is a critical one for a very large and influential client of theirs. What is the most effective and easiest way of doing this? What code do I use? Thanks for any pointers.

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• How to approach local database management via Flex/Air App

  - by Damon

  I am planning on using Flash Builder 4/Flex to write an AIR application which is primarily based around recording, storing and analyzing data. I'll be creating charts etc that need to update in almost real time. It's essential to me that the application be able to function without an internet connection so I need a local database of some variety, but I would also eventually like to build in online synchronization of the data where either database can be update each other based on newer information. Moreover, some type of encryption would definitely be welcome, and speed is a large concern With all that in mind, what is my best approach to try and avoid headaches down the road?

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• Can I prevent iPhone from using 3G under any circumstances?

  - by dageshi

  I'm writing a travel guide related app that will download large databases (60meg) potentially overseas, with the reachability code I can tell when a host is reachable via wifi or 3g BUT I'm worried that if for some reason the wifi connection breaks for a minute or so as some DSL connections are likely to do on occasion the iphone will switch transparently to 3G and without realising I could be racking up someones phone bill with overseas data charges! So I'm wondering if anyone has any experience, in the event of such break in wifi connectivity (wifi still works but it's connection to the net is down) would the reachability code report ReachableViaWWAN? So I could wait till my download code returns, check how the host is currently reachable and if it's via 3g I could abort? Is it possible to select what type of connection I can use aka 3g or wifi exclusively?

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• How to store images efficiently (memory-wise) while still being able to process them

  - by Sheeo

  I'm working on a silverlight project where users get to create their own Collages. The problem When loading images into memory, I'm using BitmapImage so that they can be displayed directly with the Image control--but they're locked in afterwards. So I've tried storing them seperately aswell, but that just sucks up huge amounts of RAM. So in short, is there a class that'll let me store JPEG images, be able to show them with the image control, and still be able to export it afterwards? All this needs to be efficient--i.e. I'd rather not want any copying to ARGB arrays or use the WriteableBitmap to copy them over. I require to work with large collections of images, up to 300 at most. Any help apreciated!

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• compute mean in python for a generator

  - by nmaxwell

  Hi, I'm doing some statistics work, I have a (large) collection of random numbers to compute the mean of, I'd like to work with generators, because I just need to compute the mean, so I don't need to store the numbers. The problem is that numpy.mean breaks if you pass it a generator. I can write a simple function to do what I want, but I'm wondering if there's a proper, built-in way to do this? It would be nice if I could say "sum(values)/len(values)", but len doesn't work for genetators, and sum already consumed values. here's an example: import numpy def my_mean(values): n = 0 Sum = 0.0 try: while True: Sum += next(values) n += 1 except StopIteration: pass return float(Sum)/n X = [k for k in range(1,7)] Y = (k for k in range(1,7)) print numpy.mean(X) print my_mean(Y) these both give the same, correct, answer, buy my_mean doesn't work for lists, and numpy.mean doesn't work for generators. I really like the idea of working with generators, but details like this seem to spoil things. thanks for any help -nick

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• Managing StringBuilder Resources in C#

  - by Jim Fell

  Hello. My C# (.NET 2.0) application has a StringBuilder variable with a capacity of 2.5MB. Obviously, I do not want to copy such a large buffer to a larger buffer space every time it fills. By that point, there is so much data in the buffer anyways, removing the older data is a viable option. Can anyone see any obvious problems with how I'm doing this (i.e. am I introducing more performance problems than I'm solving), or does it look okay? tText_c = new StringBuilder(2500000, 2500000); private void AppendToText(string text) { if (tText_c.Length * 100 / tText_c.Capacity > 95) { tText_c.Remove(0, tText_c.Length / 2); } tText_c.Append(text); } Thanks.

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• direct access to vector elements similar to arrays

  - by mixm

  hi. im currently creating a tile based game, where elements of the games are placed in four different vectors (since there are multiple game objects with different properties, hence stored in different vectors). these game elements themselves contain x and y coordinates similar to how they are stored in a two dimensional array. i was wondering if there was a way to access these vector elements similar to two dimensional array access (currently i am implementing an for loop to cycle the elements while comparing its coordinates). this kinda sucks when i need to refresh my display at every game cycle (since the large number of comparisons and loops). im implementing this in java btw.

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• What is the fastest way to copy content of DVD to hard disc using Linux

  - by Ritesh

  I have gone through some of the links Which talks about fastest way of copying files in windows using FILE_FLAG_NO_BUFFERING and FILE_FLAG_OVERLAPPED . It also talks about how request made for read and write opeartions with BUFFER SIZE as 256KB and 128KB are faster than 1Mb .The link for that is :- Explanation for tiny reads (overlapped, buffered) outperforming large contiguous reads? I am also loking for a Similar method in linux Which allows me to copy the content of my DVD to Hard Disc in a fast Way . So I wanted to know Is there some file operation flags in Linux which would provide me the best result or Which way of Copy in Linux is the best ? My codes are all in c++.

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• Performance implications of finalizers on JVM

  - by Alexey Romanov

  According to this post, in .Net, Finalizers are actually even worse than that. Besides that they run late (which is indeed a serious problem for many kinds of resources), they are also less powerful because they can only perform a subset of the operations allowed in a destructor (e.g., a finalizer cannot reliably use other objects, whereas a destructor can), and even when writing in that subset finalizers are extremely difficult to write correctly. And collecting finalizable objects is expensive: Each finalizable object, and the potentially huge graph of objects reachable from it, is promoted to the next GC generation, which makes it more expensive to collect by some large multiple. Does this also apply to JVMs in general and to HotSpot in particular?

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• When a template is rendered in template tag code, MEDIA_URL is not in context

  - by culebrón

  I want to use a template for 2 template tags. In the template, I used {{ MEDIA_URL }} and discovered that MEDIA_URL is not in context as expected. Had to use get_config and pass it manually. Why is the setting not in context, how else can I put it there, or maybe there's a better way that a template tag? (include, etc?) from django.template import Library from apps.annoying.functions import get_config from django.template.loader import render_to_string register = Library() @register.simple_tag def next_in_gallery(photo, gallery): next = photo.get_next_in_gallery(gallery) return make_arrow('right', next) @register.simple_tag def previous_in_gallery(photo, gallery): prev = photo.get_previous_in_gallery(gallery) return make_arrow('left', prev) def make_arrow(direction, object): return render_to_string('myapp/arrow.html', {'direction': direction, 'object': object, 'MEDIA_URL': get_config('MEDIA_URL', '')})

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• Where is Win7's jump list data stored?

  - by DigiMarco

  As per Jumplist Extender, I'm trying to prevent other apps from refreshing their jump lists (it's assumed that the user WANTS to do this, seeing as this is a JL editor.) One idea is to look for file or registry changes, where the data may be stored, and prevent the data from being written to. The question is, where is the jump list data stored? It has to be somewhere! I know there's a folder location for pinned items, but I forgot what it is. It'd be great if I can get the "task" data, as well. Here's the original report.

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• UDF function with library dependencies on MySQL 5.1

  - by Fredrik

  I'm having a problem with a MySQL UDF function (mychem.sourceforge.net) that's dependent on a large library (openbabel.org) which is in turn plugin based. The problem is that the format plugins to openbabel doesn't seem to load in MySQL 5.1 and I suspect it might be due to the plugin_dir setting. I have set plugin_dir to /usr/lib/ which is the location for both libmychem.so and libopenbabel.so as well as the directory openbabel that contains the format plugins. Is there a way to turn off the plugin_dir restriction in MySQL (preferably without compiling MySQL from sources) so that I can test this hypothesis or do you have a different idea on what might cause the problem? All this is done on Ubuntu 10.04 (but I had the same kind of problems on 8.04, where I managed to get it working after a lot of steps that I unfortunately have forgotten...) I have turned off apparmor during testing and it doesn't help either.

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• Drupal - Getting node id from view to customise link in block

  - by hfidgen

  I got a little problem with Drupal (again) in that I'm trying to work out how I can build a block which is able to show the node ID of the view page the block is currently sitting on. I'm using views to build a large chunk of my site, but I need to be able to make "intelligent" blocks in PHP mode which will have dynamic content depending on what the view is displaying. So.. how can I go about finding the $nid which a view is currently displaying?! Any ideas?

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• Web framework recommendation for python (webservices, auth, cache, ...)

  - by illuminated

  Hi all, Googling for the past week, but cannot finally decide which python web framework would be right for me. The web app I'm about to develop would be almost completely "pure" html with js (jQuery). Server side would have to do the following: authentication session management caching web services (almost all the on page data would be pulled with jQuery through web services) secured web services (through some form of authentication; this is for remote accessing some of the web services though other web apps, desktop/mobile applications) If there is a good tutorial/guide/idea for how to do this in Django I would be most thankfull if someone could share it as I already have experience with it. The thing that made me start thinking about other frameworks is Django's built in ORM. I know I could swap it with SQLAlchemy, but wouldn't go down that road if I'm not sure all the rest of the requirements is supported. Thanks all in advance.

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• How do I get started on a bigger project?

  - by Axilus

  Hey guys, Most of the time I have been programming little apps either for myself or for the benifit of learning. Now that my programming skills are considered somewhat intermediate, I was wondering how I would tackle a large programming project. Lets suppose I wanted to make an application that has a lot of features and is intended for the use of others and not just myself; how do I go about planning for such projects? Do I just jump in and start coding the thing or is there some sort of recommended process? Thanks in advance :D

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• Can you safely rely upon Yahoo Pipes to offload ETL for your application?

  - by Daniel DiPaolo

  Yahoo Pipes are a very intriguing choice for sort of a poor-man's server-free ETL solution, but would it be a good idea to build an application around one or many Pipes? I've really only used them for toy things here and there, with the only thing I've used longer than a week or two being one amalgamated and filtered RSS feed that I've plugged into Google Reader (which has worked great, but if it goes out for a while I wouldn't notice). So, my question is, would building an application around Yahoo Pipes be reliable (available most of the time)? Ideally it'd be something I could rely on being up 99+% of the time. It looks like the Pipes Terms of Use permit building apps around it, but I am unfamiliar with anyone building anything significant using them.

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• Applying a pixel shader effect to a portion of an image

  - by Nick

  I have a ScrollViewer that contains a very large video (16 megapixel @ 10fps) and I want to apply a pixel shader effect to it. Given the size of the images I can't apply the effect directly to the image. So I apply the effect to the ScrollContentPresenter in the control style. Which is great, everything runs nice and fast. However, I'm also rendering annotations inside of the ScrollContentPresenter which I do NOT want effects applied to (but they need to move and scale along with the image). Is there to apply the effect just to the clipped and displayed portion of the image or do I need to build a rather more complex control?

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• Efficient way to delete a line from a text file (C#)

  - by Valentin Vasilyev

  Hello. I need to delete a certain line from a text file. What is the most efficient way of doing this? File can be potentially large(over million records). Thank you. UPDATE: below is the code I'm currently using, but I'm not sure if it is good. internal void DeleteMarkedEntries() { string tempPath=Path.GetTempFileName(); using (var reader = new StreamReader(logPath)) { using (var writer = new StreamWriter(File.OpenWrite(tempPath))) { int counter = 0; while (!reader.EndOfStream) { if (!_deletedLines.Contains(counter)) { writer.WriteLine(reader.ReadLine()); } ++counter; } } } if (File.Exists(tempPath)) { File.Delete(logPath); File.Move(tempPath, logPath); } }

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• Mixing JPA annotations and XML configuration

  - by HDave

  I have a fairly large (new) project in which we have annotated many domain classes with JPA mappings. Now it is time to implement many named queries -- some entities may have as many as 15-20 named queries. I am thinking that writing these named queries in annotations will clutter the source files and therefore am considering putting these in XML mapping files. Is this possible? Mort importantly, is this reasonable? Are there better approaches? How is this done?

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• Preprocess strings file during Xcode build

  - by stigi

  Hello, I know there's a way to preprocess my info.plist file, but is there a similar way to process strings files inside my Settings.bundle? My problem: I have an iPhone app and I want the the user to know about the currently installed version. I do this by displaying it in the apps settings. Now every time i change the bundle version in my info.plist i also have to change the version in the Root.strings in the Settings.bundle. I could run a script action that updates it, but it would be nice to use the preprocessor since I could do even more fun things with it. Thanks!

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• IE downloads and installs CAB dialog popup upon every page refresh

  I have a signed cab on an aspx page. I am seeing the following inconsistent behavior. Any insights would be highly appreciated. On some machines, the cab is downloaded and installed on every page refresh. On few of those machines, the IE "install cab" dialog pops up on every page refresh, while on the others it pops up only once. Additional info: The CAB contains a .NET DLL The CAB is slightly large (around 30 MB), hence recurring download behavior is a pain Target browsers are IE6 and IE7, and the behavior is common to both!

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