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  • IOError: [Errno 32] Broken pipe

    - by khati
    I got "IOError: [Errno 32] Broken pipe" while writing files in linux. I am using python to read each line a of csv file and then write into a database table. My code is f = open(path,'r') command = command to connect to database p = Popen(command, shell=True, stdin=PIPE, stdout=PIPE, stderr=PIPE, env=env) query = " COPY myTable( id, name, address) FROM STDIN WITH DELIMITER ';' CSV QUOTE '"'; " p.stdin.write(query.encode('ascii')) *-->(Here exactly I got the error, p.stdin.write(query.encode('ascii')) IOError: [Errno 32] Broken pipe )* So when I run this program in linux, I got error "IOError: [Errno 32] Broken pipe" . However this works fine when I run in windows7. Do I need to do some configuration in Linux sever? Any suggestions will be appreciated. Thank you.

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  • How can I have APF block script kiddies that mod_security detects?

    - by Gaia
    In one of the vhosts' error_log I found thousands of lines like these, all from the same IP: [Mon Apr 19 08:15:59 2010] [error] [client 61.147.67.206] mod_security: Access denied with code 403. Pattern match "(chr|fwrite|fopen|system|e?chr|passthru|popen|proc_open|shell_exec|exec|proc_nice|proc_terminate|proc_get_status|proc_close|pfsockopen|leak|apache_child_terminate|posix_kill|posix_mkfifo|posix_setpgid|posix_setsid|posix_setuid|phpinfo)\\\\(.*\\\\)\\\\;" at THE_REQUEST [id "330001"] [rev "1"] [msg "Generic PHP exploit pattern denied"] [severity "CRITICAL"] [hostname "x.x.x.x"] [uri "//webmail/config.inc.php?p=phpinfo();"] Given how obvious the situation is, how come mod_security isnt automatically adding at least that IP to deny rules? There is no way someone hasnt thought of this before...

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  • Limit on WMIC requests from a Windows Service

    - by Anders
    Hi all, Does anyone know if there is limit on how many wmic requests Windows can handle simultaneously if they are originating from a Windows service? The reason I'm asking is because my application fails when too many simultaneous requests have been initiated. I don't get any data back from the application. However, If I compile the Python application and run it as a stand alone application all will work fine. The wmic calls are looking like this: subprocess.Popen("wmic path Win32_PerfFormattedData_PerfOS_Memory get CommittedBytes", stdout=subprocess.PIPE, stderr=subprocess.PIPE) This makes me wonder, is there a limit Windows Services and what they can perform? I mean, if the .exe file can handle all requests, then it must be something to do with the fact that I have compiled it as a Windows service.

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  • Secure against c99 and similar shells

    - by Amit Sonnenschein
    I'm trying to secure my server as much as i can without limiting my options, so as a first step i've prevented dangerous functions with php disable_functions = "apache_child_terminate, apache_setenv, define_syslog_variables, escapeshellarg, escapeshellcmd, eval, exec, fp, fput, ftp_connect, ftp_exec, ftp_get, ftp_login, ftp_nb_fput, ftp_put, ftp_raw, ftp_rawlist, highlight_file, ini_alter, ini_get_all, ini_restore, inject_code, mysql_pconnect, openlog, passthru, php_uname, phpAds_remoteInfo, phpAds_XmlRpc, phpAds_xmlrpcDecode, phpAds_xmlrpcEncode, popen, posix_getpwuid, posix_kill, posix_mkfifo, posix_setpgid, posix_setsid, posix_setuid, posix_setuid, posix_uname, proc_close, proc_get_status, proc_nice, proc_open, proc_terminate, shell_exec, syslog, system, xmlrpc_entity_decode" but i'm still fighting directory travel, i can't seems to be able to limit it, by using a shell script like c99 i can travel from my /home/dir to anywhere on the disc. how can i limit it once and for all ?

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  • Convertion of tiff image in Python script - OCR using tesseract

    - by PYTHON TEAM
    I want to convert a tiff image file to text document. My code perfectly as I expected to convert tiff images with usual font but its not working for french script font . My tiff image file contains text. The font of text is in french script format.I here is my code import Image import subprocess import util import errors tesseract_exe_name = 'tesseract' # Name of executable to be called at command line scratch_image_name = "temp.bmp" # This file must be .bmp or other Tesseract-compatible format scratch_text_name_root = "temp" # Leave out the .txt extension cleanup_scratch_flag = True # Temporary files cleaned up after OCR operation def call_tesseract(input_filename, output_filename): """Calls external tesseract.exe on input file (restrictions on types), outputting output_filename+'txt'""" args = [tesseract_exe_name, input_filename, output_filename] proc = subprocess.Popen(args) retcode = proc.wait() if retcode!=0: errors.check_for_errors() def image_to_string(im, cleanup = cleanup_scratch_flag): """Converts im to file, applies tesseract, and fetches resulting text. If cleanup=True, delete scratch files after operation.""" try: util.image_to_scratch(im, scratch_image_name) call_tesseract(scratch_image_name, scratch_text_name_root) text = util.retrieve_text(scratch_text_name_root) finally: if cleanup: util.perform_cleanup(scratch_image_name, scratch_text_name_root) return text def image_file_to_string(filename, cleanup = cleanup_scratch_flag, graceful_errors=True): If cleanup=True, delete scratch files after operation.""" try: try: call_tesseract(filename, scratch_text_name_root) text = util.retrieve_text(scratch_text_name_root) except errors.Tesser_General_Exception: if graceful_errors: im = Image.open(filename) text = image_to_string(im, cleanup) else: raise finally: if cleanup: util.perform_cleanup(scratch_image_name, scratch_text_name_root) return text if __name__=='__main__': im = Image.open("/home/oomsys/phototest.tif") text = image_to_string(im) print text try: text = image_file_to_string('fnord.tif', graceful_errors=False) except errors.Tesser_General_Exception, value: print "fnord.tif is incompatible filetype. Try graceful_errors=True" print value text = image_file_to_string('fnord.tif', graceful_errors=True) print "fnord.tif contents:", text text = image_file_to_string('fonts_test.png', graceful_errors=True) print text

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  • xterm python subprocess

    - by Quacked Python
    If using subprocess to execute an xterm on linux, which in turn executes some other process, it seems that Python (2.6.5) will never recognize that the process (xterm) has completed execution. Consider the following code: import subprocess import shlex import time proc = subprocess.Popen(shlex.split('xterm -iconic -title "FOO_BAR" -e sleep 5')) while True: if proc.poll(): print 'Process completed' time.sleep(0.1) This will loop infinitely until you terminate the Python interpreter. I'm guessing that this is probably caused by some oddity with xterm, and not a direct cause of the Python subprocess module, but maybe there are some other smart people out there that could shed some light on the situation. Note: Calling proc.communicate() will in fact return when the xterm completes, but for some reason the poll method will not work.

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  • Non-blocking read on a stream in python.

    - by Mathieu Pagé
    Hi, I'm using the subprocess module to start a subprocess and connect to it's output stream (stdout). I want to be able to execute non-blocking reads on its stdout. Is there a way to make .readline non-bloking or to check if there is data on the stream before I invoke .readline? I'd like this to be portable or at least work under Windows and Linux. here is how I do it for now (It's blocking on the .readline if no data is avaible): p = subprocess.Popen('myprogram.exe', stdout = subprocess.PIPE) str = p.stdout.readline() Thanks for your help.

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  • Clean stop of Python bottle webserver when started from subprocess

    - by luc
    Hello all, I would like to embed the great Bottle web framework into a small application (1st target is Windows OS). This app starts the bottle webserver thanks to the subprocess module. import subprocess p = subprocess.Popen('python websrv.py') The bottle app is quite simple @route("/") def index(): return template('index') run(reloader=True) It starts the default webserver into a Windows console. All seems Ok except the fact that I must press Ctrl-C to close the bottle webserver. I would like that the master app terminates the webserver when it shutdowns. I can't find a way to do that (p.terminate() doesn't work in this case unfortunately) Any idea? Thanks in advance

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  • write error: Broken pipe

    - by Fahim
    Hi, I have to run a tool on around 300 directories. Each run take around 1 minute to 30 minute or even more than that. So, I wrote a python script having a loop to run the tool on all directories one after another. my python script has code something like: for directory in directories: os.popen('runtool_exec ' + directory) But when I run the python script I get the following error messages repeatedly: .. tail: write error: Broken pipe date: write error: Broken pipe .. All I do is login on a remote server using ssh where the tool, python script, and subject directories are kept. When I individually run the tool from command prompt using command like: runtool_exec directory it works fine. "broken pipe" error is coming only when I run using the python script. Any idea, workaround? Please suggest. Thanks. Fahim

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  • why does python.subprocess hang after proc.communicate()?

    - by ccfenix
    I've got an interactive program called my_own_exe. First, it prints out alive, then you input S\n and then it prints out alive again. Finally you input L\n. It does some processing and exits. However, when I call it from the following python script, the program seemed to hang after printing out the first 'alive'. Can anyone here tell me why this is happening? Thanks proc2 = subprocess.Popen("my_own_exe", shell=True , stdin=subprocess.PIPE, stdout=subprocess.PIPE) print proc2.communicate()[0] time.sleep(2); print "alive" # 'hang' after print this line proc2.communicate('S\n')[0] print "alive" print proc2.communicate()[0] time.sleep(6)

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  • running an outside program (executable) in python?

    - by Mesut
    Hello all, I just started working on python and I have been trying to run an outside executable form python. I have an executable for a program written in Fortran. Lets say the name for the executable is flow.exe. And my executable is lacated in C:\Documents and Settings\flow_model I tried both os.system and popen commands but so far couldnt make it work. The following code seems like opens the command window but wouldnt execute the model. # Import system modules import sys, string, os, arcgisscripting os.system("C:/Documents and Settings/flow_model/flow.exe") Any suggestions out there? Any help would be greatly appreciated.

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  • Wrapper around bash, control STDIN and STDOUT

    - by blinry
    I would like to talk to a interactive bash process. Here is an example, so you know what I want to archieve: Program starts a new bash process. User types "ls" into my program. Program sends this command to the bash process. Program reads all available output of the bash (including the prompt) and displays it back to the user. GOTO 1 As you can guess, there is much room for nifty manipulations here and there... ;-) It would be wonderful if this also worked for subprocesses (started by the bash process) and curses-based programs. I would like to implement this functionality in Ruby, and already have experimented with IO.popen, but strange things happen. You are also welcome to do this in other languages.

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  • Robustly killing Windows programs stuck reporting 'problems'

    - by grrussel
    I am looking for a means to kill a Windows exe program that, when being tested from a python script, crashes and presents a dialog to the user; as this program is invoked many times, and may crash repeatedly, this is not suitable. The problem dialog is the standard reporting of a Windows error: "Foo.exe has encountered a problem and needs to close. We are sorry for the inconvenience" and offers a Debug, Send Error Report, and Don't Send buttons. I am able to kill other forms of dialog resulting from crashes (e.g. a Debug build's assert failure dialog is OK.) I have tried taskkill.exe, pskill, and the terminate() function on the Popen object from the subprocess module that was used to invoke the .exe Has anyone encountered this specific issue, and found a resolution? I expect automating user input to select the window, and press the "Don't Send" button is one possible solution, but I would like something far simpler if possible

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  • How to stop the Bottle webserver when started from subprocess

    - by luc
    Hello all, I would like to embed the great Bottle web framework into a small application (1st target is Windows OS). This app starts the bottle webserver thanks to the subprocess module. import subprocess p = subprocess.Popen('python websrv.py') The bottle app is quite simple @route("/") def index(): return template('index') run(reloader=True) It starts the default webserver into a Windows console. All seems Ok except the fact that I must press Ctrl-C to close the bottle webserver. I would like that the master app terminates the webserver when it shutdowns. I can't find a way to do that (p.terminate() doesn't work in this case unfortunately) Any idea? Thanks in advance

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  • python,running command line servers - they're not listening properly

    - by deepblue
    hello all Im attempting to start a server app (in erlang, opens ports and listens for http requests) via the command line using pexpect (or even directly using subprocess.Popen()). the app starts fine, logs (via pexpect) to the screen fine, I can interact with it as well via command line... the issue is that the servers wont listen for incoming requests. The app listens when I start it up manually, by typing commands in the command line. using subprocess/pexpect stops the app from listening somehow... when I start it manually "netstat -tlp" displays the app as listening, when I start it via python (subprocess/pexpect) netstat does not register the app... I have a feeling it has something to do with the environemnt, the way python forks things, etc. Any ideas? thank you

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  • IMB_ibImageFromMemory: unknown fileformat?

    - by Antoni4040
    Here's my add-on: import bpy import os import sys import subprocess import threading class ExportToGIMP(bpy.types.Operator): bl_idname = "uv.exporttogimp" bl_label = "Export to GIMP" def execute(self, context): self.filepath = os.path.join(os.path.dirname(bpy.data.filepath), "Layout") bpy.ops.uv.export_layout(filepath=self.filepath, check_existing=True, export_all=False, modified=False, mode='PNG', size=(1024, 1024), opacity=0.25, tessellated=False) self.files = os.path.dirname(bpy.data.filepath) cmd = " (python-fu-bgsync RUN-NONINTERACTIVE)" subprocess.Popen(['gimp', '-b', cmd]) self.update() return {'FINISHED'}; def update(self): self.thread = threading.Timer(3.0, self.update).start() self.filepath2 = "/home/antoni4040/????afa/Layout1.png" bpy.ops.image.open(filepath=self.filepath2, filter_blender=False, filter_image=True, filter_movie=False, filter_python=False, filter_font=False, filter_sound=False, filter_text=False, filter_btx=False, filter_collada=False, filter_folder=True, filemode=9, relative_path=False) tex = bpy.data.textures.new(name = self.filepath2, type = "IMAGE") def exporttogimp_menu(self, context): self.layout.operator(ExportToGIMP.bl_idname, text="Export To GIMP") bpy.utils.register_class(ExportToGIMP) bpy.types.IMAGE_MT_uvs.append(exporttogimp_menu) But I can't load an image, because I get this: Reached EOF while decoding PNG IMB_ibImageFromMemory: unknown fileformat (/home/antoni4040/????afa/Layout1.png) What is that?

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  • Subprocess fails to catch the standard output

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "<string>", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in <module> align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO\__init__.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • read subprocess stdout line by line

    - by Caspin
    My python script uses subprocess to call a linux utility that is very noisy. I want to store all of the output to a log file, but only show some of it to the user. I thought the following would work, but the output does show up in my application until the utility has produced a significant amount of output. #fake_utility.py, just generates lots of output over time import time i = 0 while True: print hex(i)*512 i += 1 time.sleep(0.5) #filters output import subprocess proc = subprocess.Popen(['python','fake_utility.py'],stdout.subprocess.PIPE) for line in proc.stdout: #the real code does filtering here print "test:", line.rstrip() The behavior I really want is for the filter script to print each line as it is received from the subprocess. Sorta like what tee does but with python code. What am I missing? Is this even possible?

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  • Python: Converting a tuple to a string with 'err'

    - by skylarking
    Given this : import os import subprocess def check_server(): cl = subprocess.Popen(["nmap","10.7.1.71"], stdout=subprocess.PIPE) result = cl.communicate() print result check_server() check_server() returns this tuple: ('\nStarting Nmap 4.53 ( http://insecure.org ) at 2010-04-07 07:26 EDT\nInteresting ports on 10.7.1.71:\nNot shown: 1711 closed ports\nPORT STATE SERVICE\n21/tcp open ftp\n22/tcp open ssh\n80/tcp open http\n\nNmap done: 1 IP address (1 host up) scanned in 0.293 seconds\n', None) Changing the second line in the method to result, err = cl.communicate() results in check_server() returning : Starting Nmap 4.53 ( http://insecure.org ) at 2010-04-07 07:27 EDT Interesting ports on 10.7.1.71: Not shown: 1711 closed ports PORT STATE SERVICE 21/tcp open ftp 22/tcp open ssh 80/tcp open http Nmap done: 1 IP address (1 host up) scanned in 0.319 seconds Looks to be the case that the tuple is converted to a string, and the \n's are being stripped.... but how? What is 'err' and what exactly is it doing?

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  • Python Daemon Subprocess not working at boot

    - by Adam Richardson
    I am attempting to write a python daemon that will launch at boot. The goal of the script is to receive a job from our gearman load balancing server and complete the job. I am using the python-daemon module from pypi (http://pypi.python.org/pypi/python-daemon/). The nature of the job that it is completing is converting images in the orf (olympus raw image format) to jpeg. In order to accomplish this an outside program is used, ufraw in this case. The problem comes in when I start the daemon at boot, if I launch from the shell it runs perfectly and completes the work. When it starts at boot it is unable to launch the subprocess command. commandString = '/usr/bin/ufraw-batch --interpolation=four-color --wb=camera --compression=100 --output="' + outfile + '" --out-type=jpg --overwrite "' + infile + '"' args = shlex.split(commandString) process = subprocess.Popen(args).wait() I am not sure what I am doing wrong. Thanks for any help.

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  • Sending mail via sendmail from python

    - by Nate
    If I want to send mail not via SMTP, but rather via sendmail, is there a library for python that encapsulates this process? Better yet, is there a good library that abstracts the whole 'sendmail -versus- smtp' choice? I'll be running this script on a bunch of unix hosts, only some of which are listening on localhost:25; a few of these are part of embedded systems and can't be set up to accept SMTP. As part of Good Practice, I'd really like to have the library take care of header injection vulnerabilities itself -- so just dumping a string to popen('/usr/bin/sendmail', 'w') is a little closer to the metal than I'd like. If the answer is 'go write a library,' so be it ;-)

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  • I have an Errno 13 Permission denied with subprocess in python

    - by wDroter
    The line with the issue is ret=subprocess.call(shlex.split(cmd)) cmd = /usr/share/java -cp pig-hadoop-conf-Simpsons:lib/pig-0.8.1-cdh3u1-core.jar:lib/hadoop-core-0.20.2-cdh3u1.jar org.apache.pig.Main -param func=cat -param from =foo.txt -x mapreduce fsFunc.pig The error is. File "./run_pig.py", line 157, in process ret=subprocess.call(shlex.split(cmd)) File "/usr/lib/python2.7/subprocess.py", line 493, in call return Popen(*popenargs, **kwargs).wait() File "/usr/lib/python2.7/subprocess.py", line 679, in __init__ errread, errwrite) File "/usr/lib/python2.7/subprocess.py", line 1249, in _execute_child raise child_exception OSError: [Errno 13] Permission denied Let me know if any more info is needed. Any help is appreciated. Thanks.

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  • IO redirect engine with metadata

    - by hawk.hsieh
    Is there any C library or tool to redirect IO and be able to configured by a metadata. And provide a dynamic link library to perform custom process for feeding data into next IO. For example, network video recorder: record video: socket do_something() file preview video: socket do_something() PCI device http service: download file: socket do_something(http) file socket post file: socket do_something(http) file serial control: monitor device: uart do_something(custom protocol) popen("zip") socket I know the unix-like OS has IO redirect feature and integrate all application you want. Even socket IO you can use /dev/tcp or implement a process to redirect to stdout. But this is process based , the process's foot print is big , IPC is heavy. Therefore, I am looking for something to redirect IO in a process and the data redirect between IO is configurable with a metadata (XML,jason or others).

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  • Java/C++ communication via pipe on Windows

    - by Warlax
    Hi, I have two separate programs, one in Java and one in C++, both running on Windows. We need to do bidirectional interprocess communication between the two. Up until now, we were using this awkward solution of writing to text files and reading them on the other side, where the producer would generate a .lock file when it's done writing and the consumer would remove that when it's done reading... like I said, awkward. If we were on *nix, we would use a pipe using popen() on the C++ and RadomAccessFile on the Java side. It seems to work well. What can we do on Windows? Can we use named pipes? Thank you.

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  • Communicate multiple times with a process without breaking the pipe?

    - by Manux
    Hello, it's not the first time I'm having this problem and its really bugging me. Whenever I open a pipe using the Python subprocess module, I can only communicate with it once, as the documentation specifies: Read data from stdout and stderr, until end-of-file is reached proc = sub.Popen("psql -h darwin -d main_db".split(),stdin=sub.PIPE,stdout=sub.PIPE) print proc.communicate("select a,b,result from experiment_1412;\n")[0] print proc.communicate("select theta,zeta,result from experiment_2099\n")[0] The problem here is that the second time, Python isn't happy. Indeed, he decided to close the file after the first communicate: Traceback (most recent call last): File "a.py", line 30, in <module> print proc.communicate("select theta,zeta,result from experiment_2099\n")[0] File "/usr/lib64/python2.5/subprocess.py", line 667, in communicate return self._communicate(input) File "/usr/lib64/python2.5/subprocess.py", line 1124, in _communicate self.stdin.flush() ValueError: I/O operation on closed file So... multiple communications aren't allowed? I hope not ;) Please enlighten me.

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