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  • Imputing missing data in aligned sequences

    - by Kwame Oduro
    I want a simple perl script that can help me impute missing nucleotides in aligned sequences: As an example, my old_file contains the following aligned sequences: seq1 ATGTC seq2 ATGTC seq3 ATNNC seq4 NNGTN seq5 CTCTN So I now want to infer all Ns in the file and get a new file with all the Ns inferred based on the majority nucleotide at a particular position. My new_file should look like this: seq1 ATGTC seq2 ATGTC seq3 ATGTC seq4 ATGTC seq5 CTCTC A script with usage: "impute_missing_data.pl old_file new_file" or any other approach will be helpful to me. Thank you.

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  • Image Source binded to missing file

    - by Am
    How can I display a default image when the binded path file is missing? <Image Source="{Binding DisplayedBook.ImagePath}" /> My solution: Used a converter, which check if the image exists and returns the appropriate path.

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  • missing subscript c++

    - by Makenshi
    right now c++ is giving me this error: error C2087 'color' missing subscript first time i get this and i dont know what to do .< hope any1 can help me struct Color{ float r; float g; float b; };Color color[][]; and im using it here for(int i=0;i<cubes;i++) { color[i][0].r = fRand();color[i][0].g=fRand(.5);color[i][0].b=fRand(); ...etc

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  • Un expert en sécurité sort Aviator, un navigateur basé sur Chromium qui vide son cache par défaut et bloque l'installation des cookies tiers

    Protection de la vie privée : Aviator le nouveau navigateur voit le jour il vide part défaut son cache de navigation et bloque l'installation des cookies tiersSelon des experts en sécurité web, deux types de menaces principales guettent les internautes. Ces menaces ont en commun d'installer sur l'ordinateur des utilisateurs des logiciels. Alors que le premier type installe des malwares, la seconde catégorie est moins dangereuse. Les logiciels qu'elle installe sont plutôt du type espion.Si pour...

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  • Windows 7 Missing Shortnames

    - by Aaron Bush
    I noticed that if you get a Scripting.File object from certain windows files (Example: any wav in C:\Windows\Media) the Scripting.File.ShortPath property shows the long path. Curious I dropped to the command prompt and tried Dir /A /X and sure enough the short paths were missing from all the files in that directory. Anyone know: A.) What that's all about? B.) How to get the short path of a file that doesn't seem to have one?

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  • SQL query showing missing expression

    - by Ashok Dasari
    Query to pull the data between Yseterday 6AM to today 6AM ... SELECT lot_id, log_time, batch_no, eqp_id, STATION_ID, EXTRACTVALUE (META_DATA, '/lot_info/A3') AS A3, EXTRACTVALUE (META_DATA, '/lot_info/A3Info') AS A3Info, EXTRACTVALUE ( META_DATA, '/lot_info/apc_status_info' ) AS apc_status_info FROM t_dlis_log_history WHERE ( (EQP_ID = 'ALC4360') OR (EQP_ID = 'ALC4361') OR (EQP_ID = 'ALC1360') OR (EQP_ID = 'ALC1361') OR (EQP_ID = 'ALC1362') OR (EQP_ID = 'ALC1363') OR (EQP_ID = 'ALC1364') OR (EQP_ID = 'ALC1365') OR (EQP_ID = 'ALC355') OR (EQP_ID = 'ALC353') OR (EQP_ID = 'ALC4350') OR (EQP_ID = 'ALC354') ) AND (( log_time >= DATEADD ( HOUR, 6, CONVERT(VARCHAR (10), GETDATE (), 110) ) AND ( log_time <= DATEADD ( HOUR, 6, CONVERT(VARCHAR (10), GETDATE () + 1, 110) ) ) ) It is showing error missing expression ...

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  • Missing Required Gems - javan-whenever and cron job in rails

    - by Matenia Rossides
    Hi, I have finally managed to get javan-whenever gem working on my site5 server, and updating the crontab is quite easy, however whenever a cron job is run with the code that is generated, i get a "missing required gems" error where it lists about 8/10 of my gems. Has anyone else had this problem? If so, what would the solution be. The funny thing is that when it outputs where my gems are, this is all correct, and the gems are loading fine from within my application. Cheers, Matenia

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  • Missing Localized Screenshots Error on itunes

    - by Arvind
    I have selected Default Language as "Australian English" as Default language. When I am submitting the binary it showing as rejected"Red Icon" with status "Missing Localized Screenshots". The application is in only single language. I have added screen shots also the application is only for iphone. When I am looking binary information that is showing as: Localizations : ( "en-AU" ) Please suggest me where I am making mistake.

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  • Can't find this.Controls - what am I missing?

    - by Adam S
    Sorry for a potentially dumb question, I am still new at this. I really appreciate your help. Referring to http://stackoverflow.com/questions/1536739/c-get-control-by-name/1536756#1536756 But I don't have a "this.Controls" available. Is there something I am missing here? In other words, when I type "this." and visual studio populates a list of option, there is no "Controls" option.

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  • Client Server Assembly Missing? Db4Objects 7.4

    - by Tim Jarvis
    I have downloaded the current version of Db4Objects (7.4) and installed it. It appears to be missing the Client Server assembly Db4objects.Db4o.CS.dll Does anyone know if Client Server has changed with this version? If it has, does anyone have some details about creating a simple Server?

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  • C# Check for missing number in sequence

    - by Jon
    I have an List<int> which contains 1,2,4,7,9 for example. I have a range from 0 to 10. Is there a way to determine what numbers are missing in that sequence? I thought LINQ might provide an option but I can't see one In the real world my List could contain 100,000 items so performance is key

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  • Missing $ on loop variable

    - by k0re
    Hi, 1 #!/usr/bin/perl 2 use strict; 3 use warnings; 4 5 my @array = qw[a b c]; 6 foreach my($a,$b,$c) (@array) { 7 print "$a , $b , $c\n"; 8 } I receive following error: Missing $ on loop variable What is wrong? I am using: perl v5.10.1 (*) built for x86_64-linux-thread-multi

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  • Missing sounds in cocos engine!

    - by Demis
    Hello guys, today i took some problem with sounds... I made video before 1st lvl of game, Why after playing the player (with video) in cocos sound engine, game missing sounds (buttons sounds etc) But music work good.

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  • Amazon Product API: "Your request is missing a required parameter combination" on Blended ItemSearch

    - by Daniel Schaffer
    I'm having some problems trying to do an ItemSearch on the Blended index using the Amazon Product API. According to the documentation, Blended requests cannot specify the MerchantId parameter - and indeed, if I try to include it I get an error telling me so. However, when I don't include it, I get an error telling me that my request is missing a required parameter combination and that a valid combination includes MerchantId... what the hell? Here's the XML response: <Items xmlns="http://webservices.amazon.com/AWSECommerceService/2005-10-05"> <Request> <IsValid>False</IsValid> <ItemSearchRequest> <Availability>Available</Availability> <Condition>All</Condition> <Keywords> home theater pc and other geekery</Keywords> <ResponseGroup>Similarities</ResponseGroup> <ResponseGroup>SalesRank</ResponseGroup> <ResponseGroup>OfferSummary</ResponseGroup> <ResponseGroup>Small</ResponseGroup> <ResponseGroup>Images</ResponseGroup> <SearchIndex>Blended</SearchIndex> </ItemSearchRequest> <Errors> <Error> <Code>AWS.MissingParameterCombination</Code> <Message>Your request is missing a required parameter combination. Required parameter combinations include MerchantId, Availability.</Message> </Error> </Errors> </Request> </Items> The failing requests are being sent as part of batches with other requests that are succeeding. I'm using REST to send my requests, so here's an example of a request: http://ecs.amazonaws.com/onca/xml?AWSAccessKeyId=-------------& ItemSearch.1.Keywords=Mates%20of%20State& ItemSearch.1.MerchantId=Amazon& ItemSearch.1.SearchIndex=DVD& ItemSearch.2.Keywords=teaching%20Lily%20various%20computer%20related%20skills& ItemSearch.2.SearchIndex=Blended& ItemSearch.Shared.Availability=Available& ItemSearch.Shared.Condition=All& ItemSearch.Shared.ResponseGroup=Small%2CSalesRank%2CImages%2COfferSummary%2CSimilarities& Operation=ItemSearch%2CSimilarityLookup& Service=AWSECommerceService& SimilarityLookup.1.ItemId=B000FNNHZ2& SimilarityLookup.2.ItemId=B000EQ5UPU& SimilarityLookup.Shared.Availability=Available& SimilarityLookup.Shared.Condition=All& SimilarityLookup.Shared.MerchantId=Amazon& SimilarityLookup.Shared.ResponseGroup=Small%2CSalesRank%2CImages%2COfferSummary& Timestamp=2010-04-02T17%3A18%3A05Z& Signature=---------------- Any ideas as to what I'm doing wrong?

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  • Regarding Xcode SDK IOS 4.2 installation and missing iOS 4.1

    - by AstaIn enopi
    Hi All, i have download Xcode SDK 4.2(xcode_3.2.5_and_ios_sdk_4.2_final.dmg) from Apple developer site and installed successfully . when open my old xcode project it shows baseSDk missing ,when i try to change project setting ,i have found and set base SDk as 4.2 it works fine my problem is ,in Base SDk list it shows (iOS 2.1, iOS 2.2, iOS 2.2.1, iOS 3.0, iOS 3.1, iOS 3.1.2, iOS 3.1.3, iOS 4.2) There is no iOS 4.0 and iOS 4.1 (which i have used before 4.2). anything wrong in my installation???? Plz help me to correct my mistake Thanks in advance

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  • Missing help files for Microsoft.WindowsMobile in Visual Studio 2008 help system

    - by Johann Gerell
    I've just installed the Windows Mobile 6.5.3 DTK, both standard and professional. Before that I had the standard and professional Windows Mobile 6 SDKs. All Windows Mobile help pages are missing in Visual Studio 2008's help system - in particular everything in the Microsoft.WindowsMobile namespace. Microsoft.WindowsMobile.DirectX is there, but it's not part of the Windows Mobile 6 SDK or 6.5.3 DTK. If I open the WM6 docs from the freshly created program group, then it's all fine and dandy, but there doesn't seem to have been a proper integration with VS during installation. Any ideas what's gone wrong and how to fix it?

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  • ASP.NET Routing : RouteCollection class missing

    - by Shyju
    I am developing a website(web forms , not MVC) in VS 2008(with SP1 ).I am trying to incorporate the ASP.NET Routing.I am following the MSDN tutorial to do it. http://msdn.microsoft.com/en-us/library/cc668201.aspx I have added the below items to my glbal.asax.cs file as per the tutorial protected void Application_Start(object sender, EventArgs e) { RegisterRoutes(RouteTable.Routes); } public static void RegisterRoutes(RouteCollection routes) { routes.Add(new Route ( "Category/{action}/{categoryName}" , new CategoryRouteHandler() )); } When trying to build it is telling like "The type or namespace name 'RouteCollection' could not be found (are you missing a using directive or an assembly reference?) I have System.web imported to my global.asax file Any Idea how to get rid of it ?

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  • java.sql.SQLException: SQL logic error or missing database

    - by Sunil Kumar Sahoo
    Hi All, I ahve created database connection with SQLite using JDBC in java. My sql statements execute properly. But sometimes I get the following error while i use conn.commit() java.sql.SQLException: SQL logic error or missing database Can anyone please help me how to avoid this type of problem. Can anyone give me better approach of calling JDBC programs Class.forName("org.sqlite.JDBC"); conn = DriverManager.getConnection("jdbc:sqlite:/home/Data/database.db3"); conn.setAutoCommit(false); String query = "Update Chits set BlockedForChit = 0 where ServerChitID = '" + serverChitId + "' AND ChitGatewayID = '" + chitGatewayId + "'"; Statement stmt = null; try { stmt.execute(query); conn.commit(); stmt.close(); stmt = null; } Thanks Sunil Kumar Sahoo

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  • java.sql.SQLException: SQL logic error or missing database, SQLite, JDBC

    - by Sunil Kumar Sahoo
    Hi All, I ahve created database connection with SQLite using JDBC in java. My sql statements execute properly. But sometimes I get the following error while i use conn.commit() java.sql.SQLException: SQL logic error or missing database Can anyone please help me how to avoid this type of problem. Can anyone give me better approach of calling JDBC programs Class.forName("org.sqlite.JDBC"); conn = DriverManager.getConnection("jdbc:sqlite:/home/Data/database.db3"); conn.setAutoCommit(false); String query = "Update Chits set BlockedForChit = 0 where ServerChitID = '" + serverChitId + "' AND ChitGatewayID = '" + chitGatewayId + "'"; Statement stmt = conn.createStatement(); try { stmt.execute(query); conn.commit(); stmt.close(); stmt = null; } Thanks Sunil Kumar Sahoo

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  • Where is cmcfg32.lib?

    - by Doo Dee
    Hello! I found a source code on MSDN about how to enable/disable privileges in C++ According to the source code, the linker must include cmcfg32.lib, but it can't be found... I tried to compile without including that lib, it compiles without any error, but when I launch my program, it crashes with a fatal error. So please, if you know which SDK contains cmcfg32.lib, let me know ;) Thanks!

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