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• SD card won't appear after upgrade to 13.10

  - by Pixel

  My SD card won't mount when I put it into my lap top, everything was fine before the upgrade. The information about the SD card appears just fine when I type "sudo fdisk l " it just says that it doesn't have a valid partition table. When I type "_sudo blkid" I get the following answer: /dev/sda1: UUID="CCA8-9030" TYPE="vfat" /dev/sda2: UUID="8a1d135b-384b-432d-b608-64dcf09ada24" TYPE="ext2" /dev/sda3: UUID="7s6PtU-kj2Z-N8XD-0mzl-840i-i3HG-enlbAf" TYPE="LVM2_member" /dev/sr0: LABEL="Bamboo CD" TYPE="iso9660" /dev/mapper/ubuntu--vg-root: UUID="c9b521c8-7c9f-493b-95c8-a7d79c465318" TYPE="ext4" /dev/mapper/ubuntu--vg-swap_1: UUID="7f155ab6-e1b9-485b-a2bc-443c0622284d" TYPE="swap" When I use lsusb: Bus 002 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub Bus 002 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 001 Device 003: ID 13d3:5710 IMC Networks UVC VGA Webcam Bus 001 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 004 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub Bus 003 Device 002: ID 046d:c52f Logitech, Inc. Unifying Receiver Bus 003 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub I've read the other threads and I couldn't really find any good answers, my card reader was compatible with the previous version of ubuntu, so technically it should still be compatible with the next version. Also I can't erase what's on the card, it contains important data which I need... :/ If you need anymore information just ask, I'll give it as soon as I can. Pixel.

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• Am I programming too slow?

  - by Jonn

  I've only been a year in the industry and I've had some problems making estimates for specific tasks. Before you close this, yes, I've already read this: http://programmers.stackexchange.com/questions/648/how-to-respond-when-you-are-asked-for-an-estimate and that's about the same problem I'm having. But I'm looking for a more specific gauge of experiences, something quantifiable or probably other programmer's average performances which I should aim for and base my estimates. The answers range from weeks, and I was looking more for an answer on the level of a task assigned for a day or so. (Note that this doesn't include submitting for QA or documentations, just the actual development time from writing tests if I used TDD, to making the page, before having it submitted to testing) My current rate right now is as follows (on ASP.NET webforms): Right now, I'm able to develop a simple data entry page with a grid listing (no complex logic, just Creating and Reading) on an already built architecture, given one full day's (8 hours) time. Adding complex functionality, and Update and Delete pages add another full day to the task. If I have to start the page from scratch (no solution, no existing website) it takes me another full day. (Not always) but if I encounter something new or haven't done yet it takes me another full day. Whenever I make an estimate that's longer than the expected I feel that others think that I'm lagging a lot behind everyone else. I'm just concerned as there have been expectations that when it's just one page it should take me no more than a full day. Yes, there definitely is more room for improvement. There always is. I have a lot to learn. But I would like to know if my current rate is way too slow, just average, or average for someone no longer than a year in the industry.

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• Slow USB 3.0 speeds

  - by Cygnus X

  Long time forum forager, first time poster. I bought a Toshiba 500 GB usb 3.0 hard drive last week and instantly ran home to see how fast I could push it. On my desktop (that I built) I was able to get 200 MB/sec. On my laptop (MSI FX something or other), which I dual boot Windows 7/Ubuntu 11.10, I was able to get about 120 MB/sec on Windows, but on Ubuntu, i get about 25 MB/sec. lsusb shows: Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 002 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 003 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 004 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub Bus 001 Device 002: ID 8087:0020 Intel Corp. Integrated Rate Matching Hub Bus 002 Device 002: ID 8087:0020 Intel Corp. Integrated Rate Matching Hub Bus 001 Device 003: ID 0bda:0139 Realtek Semiconductor Corp. Bus 002 Device 003: ID 1532:0015 Razer USA, Ltd Bus 004 Device 002: ID 0480:a007 Toshiba America Info. Systems, Inc. lspci -vvv shows that the USB 3.0 host controller is using the kernel driver in use is xhci_hcd. dmesg |grep usb shows: [ 1815.455368] usb 4-1: new SuperSpeed USB device number 2 using xhci_hcd [ 1815.475459] scsi7 : usb-storage 4-1:1.0 The built in disk utility says its connected via usb at 705 MB/s, but that's not what it reports when I transfer files over to it. Not really sure what to do at this point. Any help would be very nice, thank you.

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• Working as a contractor--questions part II

  - by universe_hacker

  This is a follow-up to this discussion: Working as a contractor--questions I still would like to get more info on the following points, when working as a contractor as opposed to direct employee: Housing: for short-term contracts (let's say 6 months or less) that are not in your home area, where and how do you search for short-term, flexible housing? Especially since an employer would typically want you to start immediately, so you don't have the time to go out and explore. Also, would you typically look for furnished apartments because the cost transporting your own furniture for a few months is not justified? Work hours and pay: are contractors more strictly supervised (as far as getting specified work done) because they get paid by the hour? There are also supposed to get overtime pay (at a higher rate) if they work more than 40 hours per week, does this really happen? Or do they work unpaid extra hours just like many regular employees? Some potential employers have mentioned paying the "per diem", which is essentially a non-taxable daily allowance, which is supposed to be used for living expenses. This money gets subtracted from you per-hour rate, but the advantage is that you pay less tax. However, from the information I have seen, the per diem can only be paid if you maintain a "permanent" residence you intend to return to. Is this checked in practice, and if yes, how?

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• Ubuntu is not detecting my android device

  - by user3514160

  I am new to android. I have just downloaded and installed android sdk. Now when I run the application from eclipse, my device is not getting detected. I have googled and was brought up with this as my solution, but that also didn't worked. Here's the 51-android.rules SUBSYSTEMS=="usb", ATTR{idProduct}=="0bb4", ATTR{idProduct}=="0c03", MODE="0666", GROUP="plugindev", OWNER="<username>" After that I rebooted my laptop, and ran this command: username@laptopname:~/Android/adt-bundle/sdk/platform-tools$ adb devices The output i get is: * daemon not running. starting it now on port 5037 * * daemon started successfully * List of devices attached ???????????? no permissions EDIT crazydeveloper@crazydeveloper:~$ lsusb Bus 002 Device 004: ID 0bb4:0c03 HTC (High Tech Computer Corp.) Bus 002 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub Bus 002 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub Bus 001 Device 003: ID 04f2:b337 Chicony Electronics Co., Ltd Bus 001 Device 002: ID 8087:0024 Intel Corp. Integrated Rate Matching Hub Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub crazydeveloper@crazydeveloper:~$ ls -l /dev/bus/usb/004/ ls: cannot access /dev/bus/usb/004/: No such file or directory crazydeveloper@crazydeveloper:~$ Edit: 2 After the answer submitted here's the output that i got: crazydeveloper@crazydeveloper:~$ ls -l /dev/bus/usb/002 total 0 crw-rw-r-- 1 root root 189, 128 May 7 09:45 001 crw-rw-r--+ 1 root root 189, 129 May 7 09:45 002 crw-rw-rw- 1 root plugdev 189, 130 May 7 09:48 003 I am using Micromax Canvas 2.2 A114 - Android Version 4.2.2 Please help me. Thanks.

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• How do you compare programming job offers from companies in different countries?

  - by Danny Tuppeny

  This isn't really a programmer-specific question, but I'm not sure of a more appropriate place, and I think the users of this site are best able to answer the question in the context of programmers. Relocating to the US seems fairly common in the programming industry. I live in the UK, and maybe one day, I might do it too. So, if that day comes - how would you go about comparing job offers? Benefits are fairly easy to compare, but given the differences in cost of living, how would you go about comparing salaries and the quality of living you'll have? In a country where the cost of living is lower, you might be able to accept a lower salary (based on exchange rate) and still have the same quality of living. But what can you do to ensure this? In some cases, you may even take a "pay rise" in terms of exchange rate, but end up far worse off. How can you compare job offers across different countries to get an idea of the salary you would need in order to not feel you've gone "backwards"?

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• Should I make up my own HTTP status codes? (a la Twitter 420: Enhance Your Calm)

  - by Max Bucknell

  I'm currently implementing an HTTP API, my first ever. I've been spending a lot of time looking at the Wikipedia page for HTTP status codes, because I'm determined to implement the right codes for the right situations. Listed on that page is a code with number 420, which is a custom code that Twitter used to use for rate limiting. There is already a code for rate limiting, though. It's 429. This led me to wonder why they would set a custom one, when there is already a use case. Is that just being cute? And if so, then which circumstances would make it acceptable to return a different status code, and what, if any problems may clients have with it? I read somewhere that Mozilla doesn't implement the joke 418: I’m a teapot response, which makes me think that clients choose which status codes they implement. If that's true, then I can imagine Twitter's funny little enhance your calm code being problematic. Unless I'm mistaken, and we can appropriate any code number to mean whatever we like, and that only convention dictates that 404 means not found, and 429 means take it easy.

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• Laptop battery charging capacity reduced to 52%

  - by omjaijagdish

  I have been using Ubuntu 11.04 on DELL Inspiron 14R (N5010) laptop for last three months. Before I switch to ubuntu my laptop battery used to give 2.5 hrs to 3 hrs back-up. But since I have been using ubuntu, it has been reduced to 1hr to 1.5 hrs at max. I tried following commands: $ cat /proc/acpi/battery/BAT0/state which gave result as present: yes capacity state: ok charging state: charged present rate: 1 mA remaining capacity: 4400 mAh present voltage: 12407 mV then I tried $ acpi -b the result was.. Battery 0: Unknown, 100% when I gave command as $ upower -i /org/freedesktop/UPower/devices/battery_BAT0 the result was.. native-path: /sys/devices/LNXSYSTM:00/device:00/PNP0C0A:00/power_supply/BAT0 model: DELL W7H3N08 serial: 7114 power supply: yes updated: Sat Nov 24 11:25:34 2012 (21 seconds ago) has history: yes has statistics: yes battery present: yes rechargeable: yes state: fully-charged energy: 48.4748 Wh energy-empty: 0 Wh energy-full: 48.4748 Wh energy-full-design: 48.9595 Wh energy-rate: 0.011017 W voltage: 12.408 V percentage: 100% **capacity: 52.9253%** technology: lithium-ion Someone please let me know, what is going wrong with my laptop? How can I get charging with full capacity?

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• How do I stop video tearing? (Nvidia prop driver, non-compositing window manager)

  - by Chan-Ho Suh

  I have that problem which seemingly afflicts many using the proprietary Nvidia driver: Video tearing: fine horizontal lines (usually near the top of my display) when there is a lot of panning or action in the video. (Note: switching back to the default nouveau driver is not an option, as its seemingly nonexistent power-management drains my battery several times faster) I've tried Totem, Parole, and VLC, and tearing occurs with all of them. The best result has been to use X11 output in VLC, but there is still tearing with relatively moderate action. Hardware: MacBook Air 3,2 -- which has an Nvidia GeForce 320M. There are two common fixes for tearing with Nvidia prop drivers: Turn off compositing, since Nvidia proprietary drivers don't usually play nice with compositing window managers on Linux (Compiz is an exception I'm aware of). But I use an extremely lightweight window manager (Awesome window manager) which is not even capable of compositing (or any cool effects). I also have this problem in Xfce, where I have compositing disabled. Enabling sync to VBlank. To enable this, I set the option in nvidia-settings and then autostart it as nvidia-settings -l with my other autostart programs. This seems to work, because when I run glxgears, I get: $ glxgears Running synchronized to the vertical refresh. The framerate should be approximately the same as the monitor refresh rate. 303 frames in 5.0 seconds = 60.500 FPS 300 frames in 5.0 seconds = 59.992 FPS And when I check the refresh rate using nvidia-settings: $ nvidia-settings -q RefreshRate Attribute 'RefreshRate' (wampum:0.0; display device: DFP-2): 60.00 Hz. All this suggests sync to VBlank is enabled. As I understand it, this is precisely designed to stop tearing, and a lot of people's problem is even getting something like glxgears to output the correct info. I don't understand why it's not working for me. xorg.conf: http://paste.ubuntu.com/992056/ Example of observed tearing::

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• How do I make apt-get instal commands not display every package that is installing?

  - by rajlego

  When I install something on terminal, it often shows me a few things for status. For one, it shows download rate (which is fine). However, when I install something, it can display Unpacking libgranite2:amd64 (0.3.0~r732+pkg64~ubuntu0.3.1) ... Selecting previously unselected package slingshot-launcher. Preparing to unpack .../slingshot-launcher_0.7.6.1+r421+pkg32~ubuntu0.3.1_amd64.deb ... Unpacking slingshot-launcher (0.7.6.1+r421+pkg32~ubuntu0.3.1) ... Selecting previously unselected package contractor. Preparing to unpack .../contractor_0.3.1~r136+pkg22~ubuntu0.3.1_amd64.deb ... Unpacking contractor (0.3.1~r136+pkg22~ubuntu0.3.1) ... Selecting previously unselected package apport-hooks-elementary. Preparing to unpack .../apport-hooks-elementary_0.1-0~35~saucy1_all.deb ... Unpacking apport-hooks-elementary (0.1-0~35~saucy1) ... Processing triggers for hicolor-icon-theme (0.13-1) ... Processing triggers for libglib2.0-0:amd64 (2.40.0-2) ... Processing triggers for man-db (2.6.7.1-1) ... Setting up libgranite-common (0.3.0~r732+pkg64~ubuntu0.3.1) ... Setting up libgranite2:amd64 (0.3.0~r732+pkg64~ubuntu0.3.1) ... Setting up slingshot-launcher (0.7.6.1+r421+pkg32~ubuntu0.3.1) ... Setting up contractor (0.3.1~r136+pkg22~ubuntu0.3.1) ... Setting up apport-hooks-elementary (0.1-0~35~saucy1) ... Processing triggers for libc-bin (2.19-0ubuntu6) .. I would rather that not show up. I only want to see download rate, not all that other stuff. How do I do this? EDIT: I would also like the jargon to be stored somwehre else if something goes wrong, or for the jargon to just be expanable on terminal.

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• Would this data requirement suit a Document -Oriented database?

  - by codecowboy

  I have a requirement to allow users to fill in journal/diary entries per day. I want to provide a handful of known journal templates with x columns to fill in. An example might be a thought diary; a user has to record a thought in one column, describe the situation, rate how they felt etc. The other requirement is that a user should be able to create their own diary templates. They might have a need for a 10 column diary entry per day and might need to rate some aspect out of 50 instead of 10. In an RDBMS, I can see this getting quite complicated. I could have individual tables for my known templates as the fields will be fixed. But for custom diary templates I imagine I would would need a table storing custom_field_types (the diary columns), a table storing entries referencing their field types (custom_entries) and then a third custom_diary table which would store rows matching custom_entries to diaries. Leaving performance / scaling aside, would it be any simpler or make more sense to use a document oriented database like MongoDB to store this data? This is for a web application which might later need an API for mobile devices.

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• How do I make apt-get install commands not display every package that is installing?

  - by rajlego

  When I install something on terminal, it often shows me a few things for status. For one, it shows download rate (which is fine). However, when I install something, it can display Unpacking libgranite2:amd64 (0.3.0~r732+pkg64~ubuntu0.3.1) ... Selecting previously unselected package slingshot-launcher. Preparing to unpack .../slingshot-launcher_0.7.6.1+r421+pkg32~ubuntu0.3.1_amd64.deb ... Unpacking slingshot-launcher (0.7.6.1+r421+pkg32~ubuntu0.3.1) ... Selecting previously unselected package contractor. Preparing to unpack .../contractor_0.3.1~r136+pkg22~ubuntu0.3.1_amd64.deb ... Unpacking contractor (0.3.1~r136+pkg22~ubuntu0.3.1) ... Selecting previously unselected package apport-hooks-elementary. Preparing to unpack .../apport-hooks-elementary_0.1-0~35~saucy1_all.deb ... Unpacking apport-hooks-elementary (0.1-0~35~saucy1) ... Processing triggers for hicolor-icon-theme (0.13-1) ... Processing triggers for libglib2.0-0:amd64 (2.40.0-2) ... Processing triggers for man-db (2.6.7.1-1) ... Setting up libgranite-common (0.3.0~r732+pkg64~ubuntu0.3.1) ... Setting up libgranite2:amd64 (0.3.0~r732+pkg64~ubuntu0.3.1) ... Setting up slingshot-launcher (0.7.6.1+r421+pkg32~ubuntu0.3.1) ... Setting up contractor (0.3.1~r136+pkg22~ubuntu0.3.1) ... Setting up apport-hooks-elementary (0.1-0~35~saucy1) ... Processing triggers for libc-bin (2.19-0ubuntu6) .. I would rather that not show up. I only want to see download rate, not all that other stuff. How do I do this? EDIT: I would also like the jargon to be stored somwehre else if something goes wrong, or for the jargon to just be expanable on terminal.

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• What's the best way to use requestAnimationFrame and fixed frame rates

  - by m90

  I recently got into using the HTML5-requestAnimationFrame-API a lot on animation-heavy websites, especially after seeing the Jank Busters talk. This seems to work pretty well and really improve performance in many cases. Yet one question still persists for me: When wanting to use an animation that is NOT entirely calculated (think spritesheets for example) you will have to aim for a fixed frame rate. Of course one could go back to use setInterval again, but maybe there are other ways to tackle this. The two ways I could think of using requestAnimationFrame with a fixed frame rate are: var fps = 25; //frames per second function animate(){ //actual drawing goes here setTimeout(function(){ requestAnimationFrame(animate); }, 1000 / fps) } animate(); or var fps = 25; //frames per second var lastExecution = new Date().getTime(); function animate(){ var now = new Date().getTime(); if ((now - lastExecution) > (1000 / fps)){ //do actual drawing lastExecution = new Date().getTime(); } requestAnimationFrame(animate); } animate(); Personally, I'd opt for the second option (the first one feels like cheating), yet it seems to be more buggy in certain situations. Is this approach really worth it (especially at low frame rates like 12.5)? Are there things to be improved? Is there another way to tackle this?

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• Slight stuttering when moving windows in fresh 12.04 install

  - by Konsolkongen

  Installed Ubuntu 12.04 today and my problem is that when I'm moving the windows around my screen it doesn't feel smooth at all. Usually I can fix this by changing the refresh rate to 60Hz, but this time it doesn't help. My graphics card is a Nvidia GTX 560Ti and I've tried both the 295.40, 295.45 and 304.43 (which I'm currently using) but neither has resolved my problem. I searched around a bit and tried changing the refresh-rate using compizconfig-settings-manager and xrandr. No change using CCSM, but when I tried xrandr I got this reply: konsolkongen@konsolkongen-desktop:~$ xrandr -r 60Rate 60.0 Hz not available for this size - which is nonsense of course. This is what my xorg.conf file looks like: # nvidia-settings: X configuration file generated by nvidia-settings # nvidia-settings: version 295.33 (buildd@allspice) Fri Mar 30 15:25:24 UTC 2012 Section "ServerLayout" Identifier "Layout0" Screen 0 "Screen0" 0 0 InputDevice "Keyboard0" "CoreKeyboard" InputDevice "Mouse0" "CorePointer" Option "Xinerama" "0" EndSection Section "Files" EndSection Section "InputDevice" # generated from default Identifier "Mouse0" Driver "mouse" Option "Protocol" "auto" Option "Device" "/dev/psaux" Option "Emulate3Buttons" "no" Option "ZAxisMapping" "4 5" EndSection Section "InputDevice" # generated from default Identifier "Keyboard0" Driver "kbd" EndSection Section "Monitor" # HorizSync source: edid, VertRefresh source: edid Identifier "Monitor0" VendorName "Unknown" ModelName "Samsung SyncMaster" HorizSync 30.0 - 81.0 VertRefresh 56.0 - 75.0 Option "DPMS" EndSection Section "Device" Identifier "Device0" Driver "nvidia" VendorName "NVIDIA Corporation" BoardName "GeForce GTX 560 Ti" EndSection Section "Screen" Identifier "Screen0" Device "Device0" Monitor "Monitor0" DefaultDepth 24 Option "TwinView" "0" Option "TwinViewXineramaInfoOrder" "DFP-0" Option "metamodes" "DFP-0: 1680x1050_60 +0+0" SubSection "Display" Depth 24 EndSubSection EndSection Any help would be greatly appreciated, my obsession with video quality can't stand stuttering like this. For what it's worth though, I don't have any screen tearing, so at least V-sync is on. Thanks.

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• StringTemplate: Loading a Template from disk?

  - by Amitabh

  I am using StringTemplate in c# and following code to load a template from a subdirectory of my application. StringTemplateGroup group = new StringTemplateGroup("myGroup", "/tmp"); StringTemplate query = group.GetInstanceOf("Sample"); query.SetAttribute("column", "name"); Console.WriteLine(query); I have a template file Sample.st in the tmp directory of my application. I am getting the following error. Unhandled Exception: System.ArgumentException: Can't find template Sample.st; group hierarchy is [myGroup] Does anyone know what is wrong here?

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• trying to pass file name from aspx page to console.exe

  - by ryder1211212

  i want to pass the value of a lable or textbox in an aspx page to a console.exe application such that the if the value is sample.doc it changes to that. i am calling from the aspx page with string f = TextBox1.Text; System.Diagnostics.Process.Start("C:/DocUpload/ConsoleApplication1.exe", f); i have tried converting to string then using the string vatiable inplace of sample.doc but no luck object FileName = System.IO.Path.Combine(ExecutableFileInfo.DirectoryName, "sample.doc"); any help or ideas will be welcomed. thank u

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• Regex for capturing numbered text list

  - by crunchyt

  I have a test list that I am trying to capture data from using a regex. Here is a sample of the text format: (1) this is a sample string /(2) something strange /(3) another bit of text /(4) the last one/ something!/ I have a Regex that currently captures this correctly, but I am having some difficulty with making it work under outlier conditions. Here is my regex /\(?\d\d?\)([^\)]+)(\/|\z)/ Unfortunately some of the data contains parentheses like this: (1) this is a sample string (1998-1999) /(2) something strange (blah) /(3) another bit of text /(4) the last one/ something!/ The substrings '(1998-1999)' and '(blah)' make it fail! Anyone care to have a crack at this one? Thank you :D

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• ASP.Net MVC ReturnUrl Practice

  - by Terry

  I have a question about the returnUrl querystring parameter that is appended by ASP.Net when attempted to hit a page that requires authentication. In looking at Microsoft NerdDinner Sample's LogOn action (along with every other 'sample authentication code' I see on the 'net), it just has the ReturnUrl parameter declared in the action's signature and uses it directly in a Redirect() call. However, back in the WebForms days and using Membership Controls, we use to use the FormsAuthentication.GetReturnUrl() call. Besides returning the 'default url' if no url was specified in the querystring, it also does a few security checks (Cross App Redirect and 'IsDangerousUrl()'). Are those no longer a concern or are all the sample 'log on' actions I'm seeing all over the 'net just ignoring those issues?

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• Convert Chunk of Data into Tabular Format Using Perl

  - by neversaint

  I have a data that looks like this 1:SRX000566 Submitter: WoldLab Study: RNASeq expression profiling for ENCODE project(SRP000228) Sample: Human cell line GM12878(SRS000567) Instrument: Solexa 1G Genome Analyzer Total: 4 runs, 62.7M spots, 2.1G bases Run #1: SRR002055, 11373440 spots, 375323520 bases Run #2: SRR002063, 22995209 spots, 758841897 bases Run #3: SRR005091, 13934766 spots, 459847278 bases Run #4: SRR005096, 14370900 spots, 474239700 bases 2:SRX000565 Submitter: WoldLab Study: RNASeq expression profiling for ENCODE project(SRP000228) Sample: Human cell line GM12878(SRS000567) Instrument: Solexa 1G Genome Analyzer Total: 3 runs, 51.2M spots, 1.7G bases Run #1: SRR002052, 12607931 spots, 416061723 bases Run #2: SRR002054, 12880281 spots, 425049273 bases Run #3: SRR002060, 25740337 spots, 849431121 bases 3:SRX012407 Submitter: GEO Study: GSE17153: Illumina sequencing of small RNAs from C. elegans embryos(SRP001363) Sample: Caenorhabditis elegans(SRS006961) Instrument: Illumina Genome Analyzer II Total: 1 run, 3M spots, 106.8M bases Run #1: SRR029428, 2965597 spots, 106761492 bases Is there a compact way to convert them into tabular format (tab separated). Hence 1 entry/row per chunk. In these case 3 rows. I tried this but doesn't seem to work. perl -laF/\n/ -000ne"print join chr(9),@F" myfile.txt

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• Setting up java configurations in eclipse..Param files

  - by Charlie

  I'm going to be using ECJ for doing genetic programming and I haven't touched java in years. I'm working on setting up the eclipse environment and I'm catching a few snags. The ECJ source has several packages, and several sample programs come along with it. I ran one sample program (called tutorial1) by going to the run configurations and adding -file pathToParamsFile to the program arguments. This made it point to the params file of that tutorial and run that sample. In a new example I am testing (from the package gui) there are TWO params files. I tried pointing to just one param file and a program ran in the console, but there was supposed to be a GUI which did not load. I'm not sure what I'm doing wrong. Any help would be greaaatly appreciated.

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• Better way to write this regex to match multi-ordered property list?

  - by Andrew Philips

  I've been whacking on this regex for a while, trying to build something that can pick out multiple ordered property values (DTSTART, DTEND, SUMMARY) from an .ics file. I have other options (like reading one line at a time and scanning), but wanted to build a single regex that can handle the whole thing. SAMPLE PERL # There has got to be a better way... my $x1 = '(?:^DTSTART[^\:]*:(?<dts>.*?)$)'; my $x2 = '(?:^DTEND[^\:]*:(?<dte>.*?)$)'; my $x3 = '(?:^SUMMARY[^\:]*:(?<dtn>.*?)$)'; my $fmt = "$x1.*$x2.*$x3|$x1.*$x3.*$x2|$x2.*$x1.*$x3|$x2.*$x3.*$x1|$x3.*$x1.*$x2|$x3.*$x2.*$x1"; if ($evts[1] =~ /$fmt/smo) { printf "lines:\n==>\n%s\n==>\n%s\n==>\n%s\n", $+{dts}, $+{dte}, $+{dtn}; } else { print "Failed.\n"; } SAMPLE DATA BEGIN:VEVENT UID:0A5ECBC3-CAFB-4CCE-91E3-247DF6C6652A TRANSP:OPAQUE SUMMARY:Gandalf_flinger1 DTEND:20071127T170005 DTSTART,lang=en_us:20071127T103000 DTSTAMP:20100325T003424Z X-APPLE-EWS-BUSYSTATUS:BUSY SEQUENCE:0 END:VEVENT SAMPLE OUTPUT lines: == 20071127T103000 == 20071127T170005 == Gandalf_flinger1

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• Problem with extern keyword in C++

  - by Jeff

  What's the difference between the following two declarations? I thought they were equivalent, but the first sample works, and the second does not. I mean it compiles and runs, but the bitmap display code shows blank. I have not stepped through it yet, but am I missing something obvious? GUI_BITMAP is a simple structure describing a bitmap. This is for VC++ 2005, but I think it fails in VC++ 2008 also. Scratching my head on this one... Sample 1: extern "C" const GUI_BITMAP bmkeyA_cap_active; extern "C" const GUI_BITMAP bmkeyA_cap_inactive; Sample 2: extern "C" { const GUI_BITMAP bmkeyA_cap_active; const GUI_BITMAP bmkeyA_cap_inactive; };

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• Custom QGraphicsItems not compiling and gives "object is private" error

  - by bahree

  Hi, I am trying to create a Custom QGraphicsItem button as shown by Fred here. The code which he posted can be found here. The problem is when I try and compile the code I get the following two errors: /usr/include/qt4/QtGui/qgraphicsitem.h ‘QGraphicsItem::QGraphicsItem(const QGraphicsItem&)’ is private /usr/include/qt4/QtCore/qobject.h ‘QObject::QObject(const QObject&)’ is private Here is the code snippet which essentially is the same as that in the sample above. The error is on the class deceleration. class MyButton : public QObject, public QGraphicsItem { Q_OBJECT Q_INTERFACES(QGraphicsItem) public: MyButton(QGraphicsItem *parent = 0); MyButton(const QString normal, const QString pressed = "", QGraphicsItem *parent = 0); .... } Interestingly the other sample as shown here works fine. The sample code for that can be found here. Any idea what is wrong? Thanks in advance.

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• Code to read & write in XML

  - by user2954088

  I am trying to write code to read and write the XML but I am facing some errors, Could please someone provide the sample code to read XML in grid and can update/insert data from grid which will be saved in following sample xml file. Sample XML file: I am facing the below exception: The assembly with display name '...XmlSerializers' failed to load in the 'LoadFrom' binding context of the AppDomain with ID 1. The cause of the failure was: System.IO.FileNotFoundException: Could not load file or assembly '.....XmlSerializers, Version=1.0.0.0, Culture=neutral, PublicKeyToken=null' or one of its dependencies. The system cannot find the file specified.

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• Rails paperclip problem

  - by palani

  I have uploaded the video into my rails application by using thoughtbot-paperclip then the video is converted into "flv" format by using ffmpeg. For your reference here I specified some of my model sample code: model.rb: has_attached_file :source,:styles => {:thumb => "137x85>" } If i specified :url or :path option it doesn't worked correctly. In my view I played my video by using the following line: <%= @model.source.url.gsub(/\?.*/,'')%> If i use <%= @model.source.url%>, the video is not played. When do the puts for video url it shows me the video URL as /source/original/sample/sample.fly?22000009. I knew that the last portion is a timestamp, but i want to use <%= @model.source.url%>. What's my mistake here can any one correct me please?

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