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• need assistance with my.cnf - 1500% CPU usage

  - by Alan Long

  I'm running into a few issues with our new database server. It is a HP G8 with 2 INTEL XEON E5-2650 processors and 32GB of ram. This server is dedicated as a MySQL server (5.1.69) for our intranet portal. I have been having issues with this server staying alive - I notice high CPU usage during certain times of day (8% ~ 1500%+) and see very low memory usage (7 ~ 15%) based on using the 'top' command. When the CPU usage passes 1000%, that is when the app usually dies. I'm trying to see what I'm doing wrong with the config file, hopefully one of the experts can chime in and let me know what they think. See below for my.cnf file: [mysqld] default-storage-engine=InnoDB datadir=/var/lib/mysql socket=/var/lib/mysql/mysql.sock #user=mysql large-pages # Disabling symbolic-links is recommended to prevent assorted security risks symbolic-links=0 max_connections=275 tmp_table_size=1G key_buffer_size=384M key_buffer=384M thread_cache_size=1024 long_query_time=5 low_priority_updates=1 max_heap_table_size=1G myisam_sort_buffer_size=8M concurrent_insert=2 table_cache=1024 sort_buffer_size=8M read_buffer_size=5M read_rnd_buffer_size=6M join_buffer_size=16M table_definition_cache=6k open_files_limit=8k slow_query_log #skip-name-resolve # Innodb Settings innodb_buffer_pool_size=18G innodb_thread_concurrency=0 innodb_log_file_size=1G innodb_log_buffer_size=16M innodb_flush_log_at_trx_commit=2 innodb_lock_wait_timeout=50 innodb_file_per_table #innodb_buffer_pool_instances=4 #eliminating double buffering innodb_flush_method = O_DIRECT flush_time=86400 innodb_additional_mem_pool_size=40M #innodb_io_capacity = 5000 #innodb_read_io_threads = 64 #innodb_write_io_threads = 64 # increase until threads_created doesnt grow anymore thread_cache=1024 query_cache_type=1 query_cache_limit=4M query_cache_size=256M # Try number of CPU's*2 for thread_concurrency thread_concurrency = 0 wait_timeout = 1800 connect_timeout = 10 interactive_timeout = 60 [mysqldump] max_allowed_packet=32M [mysqld_safe] log-error=/var/log/mysqld.log pid-file=/var/run/mysqld/mysqld.pid log-slow-queries=/var/log/mysql/slow-queries.log long_query_time = 1 log-queries-not-using-indexes we connect to one database with 75 tables, the largest table has 1,150,000 entries and the second largest has 128,036 entries. I have also verified that our PHP queries are optimized as best as possible. Reference - MySQLtuner: >> MySQLTuner 1.2.0 - Major Hayden <[email protected]> >> Bug reports, feature requests, and downloads at http://mysqltuner.com/ >> Run with '--help' for additional options and output filtering -------- General Statistics -------------------------------------------------- [--] Skipped version check for MySQLTuner script [OK] Currently running supported MySQL version 5.1.69-log [OK] Operating on 64-bit architecture -------- Storage Engine Statistics ------------------------------------------- [--] Status: -Archive -BDB -Federated +InnoDB -ISAM -NDBCluster [--] Data in InnoDB tables: 420M (Tables: 75) [!!] Total fragmented tables: 75 -------- Security Recommendations ------------------------------------------- [!!] User '[email protected]' has no password set. -------- Performance Metrics ------------------------------------------------- [--] Up for: 1h 14m 50s (8M q [1K qps], 705 conn, TX: 6B, RX: 892M) [--] Reads / Writes: 68% / 32% [--] Total buffers: 19.7G global + 35.2M per thread (275 max threads) [!!] Maximum possible memory usage: 29.1G (93% of installed RAM) [OK] Slow queries: 0% (472/8M) [OK] Highest usage of available connections: 66% (183/275) [OK] Key buffer size / total MyISAM indexes: 384.0M/91.0K [OK] Key buffer hit rate: 100.0% (173 cached / 0 reads) [OK] Query cache efficiency: 96.2% (7M cached / 7M selects) [!!] Query cache prunes per day: 553614 [OK] Sorts requiring temporary tables: 0% (3 temp sorts / 1K sorts) [!!] Temporary tables created on disk: 49% (3K on disk / 7K total) [OK] Thread cache hit rate: 74% (183 created / 705 connections) [OK] Table cache hit rate: 97% (231 open / 238 opened) [OK] Open file limit used: 0% (17/8K) [OK] Table locks acquired immediately: 100% (432K immediate / 432K locks) [OK] InnoDB data size / buffer pool: 420.9M/18.0G -------- Recommendations ----------------------------------------------------- General recommendations: Run OPTIMIZE TABLE to defragment tables for better performance MySQL started within last 24 hours - recommendations may be inaccurate Reduce your overall MySQL memory footprint for system stability Increasing the query_cache size over 128M may reduce performance Temporary table size is already large - reduce result set size Reduce your SELECT DISTINCT queries without LIMIT clauses Variables to adjust: *** MySQL's maximum memory usage is dangerously high *** *** Add RAM before increasing MySQL buffer variables *** query_cache_size (> 256M) [see warning above] Thanks in advanced for your help!

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• mySQL Optimization Suggestions

  - by Brian Schroeter

  I'm trying to optimize our mySQL configuration for our large Magento website. The reason I believe that mySQL needs to be configured further is because New Relic has shown that our SELECT queries are taking a long time (20,000+ ms) in some categories. I ran MySQLTuner 1.3.0 and got the following results... (Disclaimer: I restarted mySQL earlier after tweaking some settings, and so the results here may not be 100% accurate): >> MySQLTuner 1.3.0 - Major Hayden <[email protected]> >> Bug reports, feature requests, and downloads at http://mysqltuner.com/ >> Run with '--help' for additional options and output filtering [OK] Currently running supported MySQL version 5.5.37-35.0 [OK] Operating on 64-bit architecture -------- Storage Engine Statistics ------------------------------------------- [--] Status: +ARCHIVE +BLACKHOLE +CSV -FEDERATED +InnoDB +MRG_MYISAM [--] Data in MyISAM tables: 7G (Tables: 332) [--] Data in InnoDB tables: 213G (Tables: 8714) [--] Data in PERFORMANCE_SCHEMA tables: 0B (Tables: 17) [--] Data in MEMORY tables: 0B (Tables: 353) [!!] Total fragmented tables: 5492 -------- Security Recommendations ------------------------------------------- [!!] User '@host5.server1.autopartsnetwork.com' has no password set. [!!] User '@localhost' has no password set. [!!] User 'root@%' has no password set. -------- Performance Metrics ------------------------------------------------- [--] Up for: 5h 3m 4s (5M q [317.443 qps], 42K conn, TX: 18B, RX: 2B) [--] Reads / Writes: 95% / 5% [--] Total buffers: 35.5G global + 184.5M per thread (1024 max threads) [!!] Maximum possible memory usage: 220.0G (174% of installed RAM) [OK] Slow queries: 0% (6K/5M) [OK] Highest usage of available connections: 5% (61/1024) [OK] Key buffer size / total MyISAM indexes: 512.0M/3.1G [OK] Key buffer hit rate: 100.0% (102M cached / 45K reads) [OK] Query cache efficiency: 66.9% (3M cached / 5M selects) [!!] Query cache prunes per day: 3486361 [OK] Sorts requiring temporary tables: 0% (0 temp sorts / 812K sorts) [!!] Joins performed without indexes: 1328 [OK] Temporary tables created on disk: 11% (126K on disk / 1M total) [OK] Thread cache hit rate: 99% (61 created / 42K connections) [!!] Table cache hit rate: 19% (9K open / 49K opened) [OK] Open file limit used: 2% (712/25K) [OK] Table locks acquired immediately: 100% (5M immediate / 5M locks) [!!] InnoDB buffer pool / data size: 32.0G/213.4G [OK] InnoDB log waits: 0 -------- Recommendations ----------------------------------------------------- General recommendations: Run OPTIMIZE TABLE to defragment tables for better performance MySQL started within last 24 hours - recommendations may be inaccurate Reduce your overall MySQL memory footprint for system stability Enable the slow query log to troubleshoot bad queries Increasing the query_cache size over 128M may reduce performance Adjust your join queries to always utilize indexes Increase table_cache gradually to avoid file descriptor limits Read this before increasing table_cache over 64: http://bit.ly/1mi7c4C Variables to adjust: *** MySQL's maximum memory usage is dangerously high *** *** Add RAM before increasing MySQL buffer variables *** query_cache_size (> 512M) [see warning above] join_buffer_size (> 128.0M, or always use indexes with joins) table_cache (> 12288) innodb_buffer_pool_size (>= 213G) My my.cnf configuration is as follows... [client] port = 3306 [mysqld_safe] nice = 0 [mysqld] tmpdir = /var/lib/mysql/tmp user = mysql port = 3306 skip-external-locking character-set-server = utf8 collation-server = utf8_general_ci event_scheduler = 0 key_buffer = 512M max_allowed_packet = 64M thread_stack = 512K thread_cache_size = 512 sort_buffer_size = 24M read_buffer_size = 8M read_rnd_buffer_size = 24M join_buffer_size = 128M # for some nightly processes client sessions set the join buffer to 8 GB auto-increment-increment = 1 auto-increment-offset = 1 myisam-recover = BACKUP max_connections = 1024 # max connect errors artificially high to support behaviors of NetScaler monitors max_connect_errors = 999999 concurrent_insert = 2 connect_timeout = 5 wait_timeout = 180 net_read_timeout = 120 net_write_timeout = 120 back_log = 128 # this table_open_cache might be too low because of MySQL bugs #16244691 and #65384) table_open_cache = 12288 tmp_table_size = 512M max_heap_table_size = 512M bulk_insert_buffer_size = 512M open-files-limit = 8192 open-files = 1024 query_cache_type = 1 # large query limit supports SOAP and REST API integrations query_cache_limit = 4M # larger than 512 MB query cache size is problematic; this is typically ~60% full query_cache_size = 512M # set to true on read slaves read_only = false slow_query_log_file = /var/log/mysql/slow.log slow_query_log = 0 long_query_time = 0.2 expire_logs_days = 10 max_binlog_size = 1024M binlog_cache_size = 32K sync_binlog = 0 # SSD RAID10 technically has a write capacity of 10000 IOPS innodb_io_capacity = 400 innodb_file_per_table innodb_table_locks = true innodb_lock_wait_timeout = 30 # These servers have 80 CPU threads; match 1:1 innodb_thread_concurrency = 48 innodb_commit_concurrency = 2 innodb_support_xa = true innodb_buffer_pool_size = 32G innodb_file_per_table innodb_flush_log_at_trx_commit = 1 innodb_log_buffer_size = 2G skip-federated [mysqldump] quick quote-names single-transaction max_allowed_packet = 64M I have a monster of a server here to power our site because our catalog is very large (300,000 simple SKUs), and I'm just wondering if I'm missing anything that I can configure further. :-) Thanks!

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• How do I add PHP support to Apache 2 without breaking my current installation?

  - by Hobhouse

  I run Apache 2 with WSGI (for a Django-app) on a Ubuntu box. I want to use Nagios for server monitoring, and for this purpose it seems I have to add PHP support to Apache. When I installed Apache 2, I did this: apt-get install apache2 apache2.2-common apache2-mpm-worker apache2-threaded-dev libapache2-mod-wsgi python-dev Available modules for apache2 are these: /etc/apache2/mods-available$ ls actions.conf authn_default.load cache.load deflate.conf filter.load mime.conf proxy_ftp.load suexec.load actions.load authn_file.load cern_meta.load deflate.load headers.load mime.load proxy_http.load unique_id.load alias.conf authnz_ldap.load cgi.load dir.conf ident.load mime_magic.conf rewrite.load userdir.conf alias.load authz_dbm.load cgid.conf dir.load imagemap.load mime_magic.load setenvif.conf userdir.load asis.load authz_default.load cgid.load disk_cache.conf include.load negotiation.conf setenvif.load usertrack.load auth_basic.load authz_groupfile.load charset_lite.load disk_cache.load info.conf negotiation.load speling.load version.load auth_digest.load authz_host.load dav.load dump_io.load info.load proxy.conf ssl.conf vhost_alias.load authn_alias.load authz_owner.load dav_fs.conf env.load ldap.load proxy.load ssl.load wsgi.conf authn_anon.load authz_user.load dav_fs.load expires.load log_forensic.load proxy_ajp.load status.conf wsgi.load authn_dbd.load autoindex.conf dav_lock.load ext_filter.load mem_cache.conf proxy_balancer.load status.load authn_dbm.load autoindex.load dbd.load file_cache.load mem_cache.load proxy_connect.load substitute.load What is the best way for me to add PHP support to Apache 2 without breaking my current installation and configuration?

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• Undefined reference to 'glib'

  - by dali1985

  I would like to parse a config file using glib in Codeblocks which I use. So I want to do exactly the example which is described here first. I have a file named myconfig.cfg and and a code programming.c. I just copy and paste the code to see if glib works but unfortunately it does not work. I did the installation of glib2.0 using sudo apt-get, I found where are the libs in glibs using pkg-config --cflags --libs glib-2.0 and in this path project->Build Options->Compiler Settings-> Other Options I added -I/usr/include/glib-2.0 -I/usr/lib/arm-linuxgnuebihf/glib-2.0/include When I build and run the programming.c I have these errors -------------- Build: Debug in programming --------------- gcc -Wall -g -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -std=c99 -c /home/pi/Desktop/programming/main.c -o obj/Debug/main.o g++ -o bin/Debug/programming obj/Debug/main.o /usr/lib/libmysqlclient.so.16 obj/Debug/main.o: In function `main': /home/pi/Desktop/programming/main.c:22: undefined reference to `g_key_file_new' /home/pi/Desktop/programming/main.c:26: undefined reference to `g_key_file_load_from_file' /home/pi/Desktop/programming/main.c:28: undefined reference to `g_log' /home/pi/Desktop/programming/main.c:34: undefined reference to `g_slice_alloc' /home/pi/Desktop/programming/main.c:37: undefined reference to `g_key_file_get_string' /home/pi/Desktop/programming/main.c:39: undefined reference to `g_key_file_get_locale_string' /home/pi/Desktop/programming/main.c:41: undefined reference to `g_key_file_get_boolean_list' /home/pi/Desktop/programming/main.c:43: undefined reference to `g_key_file_get_integer_list' /home/pi/Desktop/programming/main.c:45: undefined reference to `g_key_file_get_string_list' /home/pi/Desktop/programming/main.c:47: undefined reference to `g_key_file_get_integer' /home/pi/Desktop/programming/main.c:49: undefined reference to `g_key_file_get_double_list' collect2: ld returned 1 exit status Process terminated with status 1 (0 minutes, 6 seconds) 11 errors, 0 warnings Am I missing something? I tried also to do in the same way with libconfig but again I have undefined reference. Is the problem the path?

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• Missing functions in ruby 1.8

  - by Adrian

  I have a ruby gem that I developed with ruby 1.9, and it works. With ruby 1.8, though, it says this when I try to run it: dyld: lazy symbol binding failed: Symbol not found: _RBIGNUM_SIGN Referenced from: /Users/Adrian/Desktop/num_to_bytes/ext/num_to_bytes/num_to_bytes.bundle Expected in: flat namespace dyld: Symbol not found: _RBIGNUM_SIGN Referenced from: /Users/Adrian/Desktop/num_to_bytes/ext/num_to_bytes/num_to_bytes.bundle Expected in: flat namespace Trace/BPT trap If I comment out the line that uses RBIGNUM_SIGN, it complains about other functions like rb_big_modulo. Some things work, like NUM2LONG. Here are some things I have tried: In http://github.com/ruby/ruby/blob/ruby_1_8_7/ruby.h, RBIGNUM_SIGN is defined. But in all versions of ruby I have tried, it is not there. I guessed that maybe it was defined in a different .h file. Knowing that Hpricot works with 1.8, I looked at http://github.com/hpricot/hpricot/blob/master/ext/hpricot_scan/hpricot_scan.h. It doesn't include any other files that #define it. Putting things like extern VALUE rb_big_modulo(VALUE x); at the beginning of my extension don't help. Using a brand new Ubuntu installation, I apt-getted ruby, tried to install the gem, and it didn't work either. Putting have_library 'ruby', 'rb_big_modulo' in my extconf.rb didn't work. As you can probably see, I am getting desperate (after weeks of trying things!). So, how can I get this to work? Here is the gem: http://rubygems.org/gems/num_to_bytes Here is the source: http://gist.github.com/404584

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• Best Diff Tool?

  - by ila

  For all my present Diff / Merge needs I'm using Beyond Compare; when I decided to buy a license for it I tried other similar tools, both payware and freeware. Now BC is at version 3, and I think it's a great tool... but what are your experience in this field? Do you think there is something better? And what are the feature you like best on your favorite Diff tool? EDIT I'm recollecting here a list of the tools mentioned in the answers below, in order of preferences (more or less), separating pay- from free- ware and indicating supported operating system. Hope this helps. PAYWARE Beyond Compare (win + linux) - http://www.scootersoftware.com/ Araxis Merge (win + osX) - http://www.araxis.com/merge/index.html ExamDiff Pro (win) - http://www.prestosoft.com/edp_examdiffpro.asp ECMerge (win, osX, linux) - http://www.elliecomputing.com/Home/default.asp MergePlant (win) - http://www.mikado-ltd.com/ Changes (OSX) http://www.changesapp.com Deltopia DeltaWalker (win, osx, linux) http://www.deltopia.com/ FREEWARE FileMerge (OSX) - http://en.wikipedia.org/wiki/Apple_Developer_Tools#FileMerge Tortoise SVN (win) - http://tortoisesvn.net/ WinMerge (win) - http://winmerge.org/ ExamDiff (win) - http://www.prestosoft.com/ps.asp?page=edp_examdiff Diff Merge from SourceGear - http://www.sourcegear.com/diffmerge/index.html Perforce Merge (win + linux + OSX) - http://www.perforce.com/perforce/products/merge.html meld (linux) - sudo apt-get install meld http://meld.sourceforge.net/ Vimdiff - vim distribution KDiff3 - http://kdiff3.sf.net/ ediff - EMacs distribution Tiny Hexer Kompare (KDE, linux) - http://www.caffeinated.me.uk/kompare/ tkdiff (win, linux, osX) - http://tkdiff.sourceforge.net

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• eclipse 3.5.1 (Galileo) with ubuntu 9.10 (Karmic) busted! Can not install maven2 plugin! (Or any oth

  - by Denali

  I see a lot of stuff online related to fixing buttons that can't be pressed, and fixing network issues with proxies. This seems like a different problem to me, related to jem.util.0.0.0 in the case of maven2 or needed libs for other plugins. The setup: Eclipse 3.5.1 (Galileo) installed with apt-get. Ubuntu 9.10 (Karmic Koala) (This is running as a VM, not that is should matter.) General problem description: Maven2 eclipse plugin installation fails. Specifically, I can not install maven2 plugin from the eclipse installation flow using this target site: http://m2eclipse.sonatype.org/sites/m2e/ The maven site is found, installation begins, and then returns this error: Cannot complete the install because one or more required items could not be found. Software being installed: Maven Integration for Eclipse (Required) 0.10.0.20100209-0800\ (org.maven.ide.eclipse.feature.feature.group 0.10.0.20100209-0800) Missing requirement: Maven Integration for Eclipse (Required) 0.10.0.20100209-0800 (org\ .maven.ide.eclipse.feature.feature.group 0.10.0.20100209-0800) requires 'org.eclipse.jem.\ util 0.0.0' but it could not be found Official Ubuntu documentation claims eclipse 3.5.1 support, and recommends using the Synaptic Package Manager, and nothing else about any issues. Does anyone has any insight into this?

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• PHP Dev Tools (Eclipse Plugin) -- Installation Error... help?

  - by Sean Ochoa

  I have already installed WEb Tools, PyDev, and the default Eclipse installation for Ubuntu 10.04 (using "sudo apt-get install eclipe"). I'm now trying to install PHP dev tools plug-in for Eclipse, and I'm getting this error msg: Cannot complete the install because of a conflicting dependency. Software being installed: PDT SDK Feature 1.0.5.v20081126-1856 (org.eclipse.php.sdk_feature.feature.group 1.0.5.v20081126-1856) Software currently installed: Eclipse XML Editors and Tools SDK 3.1.1.v200907161031-7A228DXETAqLQFBNMuHkC8-_dRPY (org.eclipse.wst.xml_sdk.feature.feature.group 3.1.1.v200907161031-7A228DXETAqLQFBNMuHkC8-_dRPY) Only one of the following can be installed at once: Eclipse XML Editors and Tools 3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo (org.eclipse.wst.xml_ui.feature.feature.jar 3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo) Eclipse XML Editors and Tools 3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg (org.eclipse.wst.xml_ui.feature.feature.jar 3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg) Cannot satisfy dependency: From: PDT SDK Feature 1.0.5.v20081126-1856 (org.eclipse.php.sdk_feature.feature.group 1.0.5.v20081126-1856) To: org.eclipse.php_feature.feature.group [1.0.5.v20081126-1856] Cannot satisfy dependency: From: PDT Feature 1.0.5.v20081126-1856 (org.eclipse.php_feature.feature.group 1.0.5.v20081126-1856) To: org.eclipse.wst.feature.group [3.0.0,4.0.0) Cannot satisfy dependency: From: Web Developer Tools 3.0.4.v200811190840-7A-8l8Qqcz0HyVgjXUE-iuOYZ9ai (org.eclipse.wst.feature.group 3.0.4.v200811190840-7A-8l8Qqcz0HyVgjXUE-iuOYZ9ai) To: org.eclipse.wst.xml_ui.feature.feature.group [3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg] Cannot satisfy dependency: From: Eclipse XML Editors and Tools SDK 3.1.1.v200907161031-7A228DXETAqLQFBNMuHkC8-_dRPY (org.eclipse.wst.xml_sdk.feature.feature.group 3.1.1.v200907161031-7A228DXETAqLQFBNMuHkC8-_dRPY) To: org.eclipse.wst.xml_ui.feature.feature.group [3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo] Cannot satisfy dependency: From: Eclipse XML Editors and Tools 3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg (org.eclipse.wst.xml_ui.feature.feature.group 3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg) To: org.eclipse.wst.xml_ui.feature.feature.jar [3.0.4.v200811211541-7F2ENnCwum8W79A1UYNgSjOcFVJg] Cannot satisfy dependency: From: Eclipse XML Editors and Tools 3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo (org.eclipse.wst.xml_ui.feature.feature.group 3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo) To: org.eclipse.wst.xml_ui.feature.feature.jar [3.1.1.v200907161031-7H6FMbDxtkMs9OeLGF98LRhdPKeo] Any ideas?

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• how could installations/configurations be easier in linux?

  - by ajsie

  although you can do anything in linux it tends to require a lot of tweaking in config files and reading a lot of manuals/tutorials before you can have it running in your way. i know that it gets a lot easier by time, and the apt-get installations with ubuntu/debian is heading the right way. but how can linux be more userfriendly for us in the future? i thought that if more is automated like an IDE environment, eg. typing svn will give us all the commands and description about each command when you move between commands with your keyboard. that would be great. but that's just one example. another is the navigation in the terminal between folders. now you have to type a lot just to jump from/to different folders. would be great with some more automatization here too. i know that these extra features will slow down the server, but its 2010 now, and these features are not that heavy for the cpu, but makes it more userfriendly and encourage maintainance of a server, not frighten u off. what do you think about this? should/could we have more user friendly linux environment in servers, something that has annoyed you a lot? a lot of things are done in the unix way, but maybe we should reinvent the wheel in some areas, cause apparently, its so...repeatingly today and difficult to do easy tasks. it should be easier i think..

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• How to correctly set the ORACLE_HOME variable on Ubuntu 9.x?

  - by nowarninglabel

  I have the same problem as listed here: http://stackoverflow.com/questions/52239/oracle-lost-sysdba-password although I did not lose the password, I entered it twice in the configure script originally, and then when I went to login (localhost:8080/apex, password not accepted. I don't have anything in the database, I just want to install and use Oracle-XE. I have tried apt-get removing it twice and reinstalling, but if I try to run /etc/init.d/oracle-xe configure again and I get "Oracle Database 10g Express Edition is already configured" despite the second time removing any folders I could find for Oracle XE. I tried running sqlplus "/ as sysdba" but all I get is: "Error 6 initializing SQL*Plus Message file sp1.msb not found SP2-0750: You may need to set ORACLE_HOME to your Oracle software directory" I tried setting the variable via export. (also tried set). Tried: "export ORACLE_HOME=/usr/lib/oracle/xe/app/oracle/product/10.2.0/server/bin/sqlplus" and all the subdirectories of that. Same error every time. What is the ORACLE_HOME supposed to be set to? The only reference I have seen either just say general or say the above up to the version number then "/db_1". I do no thave a db_1. Let me know if need any clarification. Don't understand what I did wrong in this process.

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• Question about MySQLdb, OS X 10.5, and authentication

  - by timpone

  I'm a noob at Python and have been having problems with MySQLdb and OS X Leopard 10.5. I have a php app that is doing db access just fine with pdo but also want to access with Python. When I use the same credentials with MySQLdb as php, I get the following error: File "build/bdist.macosx-10.5-i386/egg/MySQLdb/connections.py", line 188, in __init__ _mysql_exceptions.OperationalError: (1045, "Access denied for user 'arc_db'@'localhost' (using password: YES)") The authentication piece works fine on my ubuntu server (installed via apt-get) implying that it is something specific to my OS X MySQLdb install. Looking at some postings, I thought it would be my local build of MySQLdb which seems to be problematic with OS X. But I am able to import fine: Python 2.5.1 (r251:54863, Feb 6 2009, 19:02:12) [GCC 4.0.1 (Apple Inc. build 5465)] on darwin Type "help", "copyright", "credits" or "license" for more information. >>> import MySQLdb >>> Also, wanting to create a positive, I am able to access and return results from a database tilted test_something (which presumably bypasses the MySQL's authtentication - not sure exactly how though). Trying to figure out a little more what is going on, I turn on logging for mysql and get the following (added my own comments): 100609 19:09:45 3 Connect Access denied for user 'arc_db'@'localhost' (using password: YES) //not worked 100609 19:10:02 4 Connect arc_db@localhost on arc_development //did work I'm not really sure what the 3 or 4 means but presumably a sucess or failue. So, I guess what would be the next step? Am I doing some obvious stupid python mistake (very likely)? Is there a better way for me to prove that this should / can be working? Is there any way to determine what MySQLdb is sending exactly in its authentication message to MySQL? thanks

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• Linux Lightweight Distro and X Windows for Development

  - by Fernando Barrocal

  Heyall... I want to build a lightweight linux configuration to use for development. The first idea is to use it inside a Virtual Machine under Windows, or old Laptops with 1Gb RAM top. Maybe even a distributable environment for developers. So the whole idea is to use a LAMP server, Java Application Server (Tomcat or Jetty) and X Windows (any Window manager, from FVWM to Enlightment), Eclipse, maybe jEdit and of course Firefox. Edit: I am changing this post to compile a possible list of distros and window managers that can be used to configure a real lightweight development environment. I am using as base personal experiences on this matter. Info about the distros can be easily found in their sites. So please, focus on personal use of those systems Distros Ubuntu / Xubuntu Pros: Personal Experience in old systems or low RAM environment - @Schroeder, @SCdF Several sugestions based on personal knowledge - @Kyle, @Peter Hoffmann Gentoo Pros: Not targeted to Desktop Users - @paan Don't come with a huge ammount of applications - @paan Slackware Pros: Suggested as best performance in a wise install/configuration - @Ryan Damn Small Linux Pros: Main focus is the lightweight factor - 50MB LiveCD - @Ryan Debian Pros: Very versatile, can be configured for both heavy and lightweight computers - @Ryan APT as package manager - @Kyle Based on compatibility and usability - @Kyle -- Fell Free to add Prós and Cons on this, so we can compile a good Reference. -- X Windows suggestion keep coming about XFCE. If others are to add here, open a session for it Like the distro one :)

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• if (i == 2) or if (2 == i) ?

  - by Maroloccio

  I usually use if (i == 2) in preference to if (2 == i) On occasion, I would switch things around when writing xUnit-type tests from scratch so as to follow the assertion convention of "expected" preceding "actual". When adding to existing unit tests, I always follow the style I find. No matter what, I always try to keep things consistent. Today I checked out some code with a lot of "if (2 == i)" and started wondering: which style is more "popular" nowadays? is popularity language-dependent? The latter probably because I am aware of why the "if (2 == i)" became common in the first place (C heritage) and because I see some languages go as far as disallowing assignments within conditions (e.g. Python). I thought about downloading some sources: apt-get source linux-source eclipse openoffice.org expanding them and performing a quick grep: grep --color --include=*.java --include=*.c -ERI \ "if[[:space:]]*\([[:space:]]*[[:digit:]]+[[:space:]]==" . or creating a quick "poll": http://goo.gl/mod/ciMF after a bit of searching and asking around, I am still not sure. So I am asking you: which way to go?

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• MySQL can't access root account or reset with mysqladmin

  - by glumptious

  So if I type mysql -u root I'm supposedly logged in, however upon trying to create or access a database I get this lovely error: ERROR 1044 (42000): Access denied for user ''@'localhost' to database 'test1'. I haven't the foggiest idea why after logging in as root it's trying access DB's as ''@'localhost' and it's driving me a bit crazy right now. Possibly related, when I try to set the root password I get the error mysqladmin: Can't turn off logging; error: 'Access denied; you need (at least one of) the SUPER privilege(s) for this operation'. I've tried removing mysql-server via running apt-get purge mysql-server and then reinstalling with no luck. This is running Ubuntu Server 12.10 64-bit and mysql is indeed running. --Edit-- I wonder if perhaps there is no root user. So I try to start MySQL with --skip-grant-tables and the create the root user but then I'm given this: ERROR 1290 (HY000): The MySQL server is running with the --skip-grant-tables option so it cannot execute this statement. Fun fun fun fun fun.

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• Error while compiling Hello world program for CUDA

  - by footy

  I am using Ubuntu 12.10 and have sucessfully installed CUDA 5.0 and its sample kits too. I have also run sudo apt-get install nvidia-cuda-toolkit Below is my hello world program for CUDA: #include <stdio.h> /* Core input/output operations */ #include <stdlib.h> /* Conversions, random numbers, memory allocation, etc. */ #include <math.h> /* Common mathematical functions */ #include <time.h> /* Converting between various date/time formats */ #include <cuda.h> /* CUDA related stuff */ __global__ void kernel(void) { } /* MAIN PROGRAM BEGINS */ int main(void) { /* Dg = 1; Db = 1; Ns = 0; S = 0 */ kernel<<<1,1>>>(); /* PRINT 'HELLO, WORLD!' TO THE SCREEN */ printf("\n Hello, World!\n\n"); /* INDICATE THE TERMINATION OF THE PROGRAM */ return 0; } /* MAIN PROGRAM ENDS */ The following error occurs when I compile it with nvcc -g hello_world_cuda.cu -o hello_world_cuda.x /tmp/tmpxft_000033f1_00000000-13_hello_world_cuda.o: In function `main': /home/adarshakb/Documents/hello_world_cuda.cu:16: undefined reference to `cudaConfigureCall' /tmp/tmpxft_000033f1_00000000-13_hello_world_cuda.o: In function `__cudaUnregisterBinaryUtil': /usr/include/crt/host_runtime.h:172: undefined reference to `__cudaUnregisterFatBinary' /tmp/tmpxft_000033f1_00000000-13_hello_world_cuda.o: In function `__sti____cudaRegisterAll_51_tmpxft_000033f1_00000000_4_hello_world_cuda_cpp1_ii_b81a68a1': /tmp/tmpxft_000033f1_00000000-1_hello_world_cuda.cudafe1.stub.c:1: undefined reference to `__cudaRegisterFatBinary' /tmp/tmpxft_000033f1_00000000-1_hello_world_cuda.cudafe1.stub.c:1: undefined reference to `__cudaRegisterFunction' /tmp/tmpxft_000033f1_00000000-13_hello_world_cuda.o: In function `cudaError cudaLaunch<char>(char*)': /usr/lib/nvidia-cuda-toolkit/include/cuda_runtime.h:958: undefined reference to `cudaLaunch' collect2: ld returned 1 exit status I am also making sure that I use gcc and g++ version 4.4 ( As 4.7 there is some problem with CUDA)

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• Django formset unit test

  - by Py

  I can't running Unit Test with formset. I try to do a test: class NewClientTestCase(TestCase): def setUp(self): self.c = Client() def test_0_create_individual_with_same_adress(self): post_data = { 'ctype': User.CONTACT_INDIVIDUAL, 'username': 'dupond.f', 'email': '[email protected]', 'password': 'pwd', 'password2': 'pwd', 'civility': User.CIVILITY_MISTER, 'first_name': 'François', 'last_name': 'DUPOND', 'phone': '+33 1 34 12 52 30', 'gsm': '+33 6 34 12 52 30', 'fax': '+33 1 34 12 52 30', 'form-0-address1': '33 avenue Gambetta', 'form-0-address2': 'apt 50', 'form-0-zip_code': '75020', 'form-0-city': 'Paris', 'form-0-country': 'FRA', 'same_for_billing': True, } response = self.c.post(reverse('client:full_account'), post_data, follow=True) self.assertRedirects(response, '%s?created=1' % reverse('client:dashboard')) and i have this error: ValidationError: [u'ManagementForm data is missing or has been tampered with'] My view : def full_account(request, url_redirect=''): from forms import NewUserFullForm, AddressForm, BaseArticleFormSet fields_required = [] fields_notrequired = [] AddressFormSet = formset_factory(AddressForm, extra=2, formset=BaseArticleFormSet) if request.method == 'POST': form = NewUserFullForm(request.POST) objforms = AddressFormSet(request.POST) if objforms.is_valid() and form.is_valid(): user = form.save() address = objforms.forms[0].save() if url_redirect=='': url_redirect = '%s?created=1' % reverse('client:dashboard') logon(request, form.instance) return HttpResponseRedirect(url_redirect) else: form = NewUserFullForm() objforms = AddressFormSet() return direct_to_template(request, 'clients/full_account.html', { 'form':form, 'formset': objforms, 'tld_fr':False, }) and my form file : class BaseArticleFormSet(BaseFormSet): def clean(self): msg_err = _('Ce champ est obligatoire.') non_errors = True if 'same_for_billing' in self.data and self.data['same_for_billing'] == 'on': same_for_billing = True else: same_for_billing = False for i in [0, 1]: form = self.forms[i] for field in form.fields: name_field = 'form-%d-%s' % (i, field ) value_field = self.data[name_field].strip() if i == 0 and self.forms[0].fields[field].required and value_field =='': form.errors[field] = msg_err non_errors = False elif i == 1 and not same_for_billing and self.forms[1].fields[field].required and value_field =='': form.errors[field] = msg_err non_errors = False return non_errors class AddressForm(forms.ModelForm): class Meta: model = Address address1 = forms.CharField() address2 = forms.CharField(required=False) zip_code = forms.CharField() city = forms.CharField() country = forms.ChoiceField(choices=CountryField.COUNTRIES, initial='FRA')

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• How do I install the OpenSSL C++ library on Ubuntu?

  - by Daryl Spitzer

  I'm trying to build some code on Ubuntu 10.04 LTS that uses OpenSSL 1.0.0. When I run make, it invokes g++ with the "-lssl" option. The source includes: #include <openssl/bio.h> #include <openssl/buffer.h> #include <openssl/des.h> #include <openssl/evp.h> #include <openssl/pem.h> #include <openssl/rsa.h> I ran: $ sudo apt-get install openssl Reading package lists... Done Building dependency tree Reading state information... Done openssl is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 3 not upgraded. But I guess the openssl package doesn't include the library. I get these errors on make: foo.cpp:21:25: error: openssl/bio.h: No such file or directory foo.cpp:22:28: error: openssl/buffer.h: No such file or directory foo.cpp:23:25: error: openssl/des.h: No such file or directory foo.cpp:24:25: error: openssl/evp.h: No such file or directory foo.cpp:25:25: error: openssl/pem.h: No such file or directory foo.cpp:26:25: error: openssl/rsa.h: No such file or directory How do I install the OpenSSL C++ library on Ubuntu 10.04 LTS? I did a man g++ and (under "Options for Linking") for the -l option it states: " The linker searches a standard list of directories for the library..." and "The directories searched include several standard system directories..." What are those standard system directories?

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• how could application installations/configurations be easier in linux? [closed]

  - by ajsie

  although you can do anything in linux it tends to require a lot of tweaking in config files and reading a lot of manuals/tutorials before you can have it running in your way. i know that it gets a lot easier by time, and the apt-get installations with ubuntu/debian is heading the right way. but how can linux be more userfriendly for us in the future? i thought that if more is automated like an IDE environment, eg. typing svn will give us all the commands and description about each command when you move between commands with your keyboard. that would be great. but that's just one example. another is the navigation in the terminal between folders. now you have to type a lot just to jump from/to different folders. would be great with some more automatization here too. i know that these extra features will slow down the server, but its 2010 now, and these features are not that heavy for the cpu, but makes it more userfriendly and encourage maintainance of a server, not frighten u off. what do you think about this? should/could we have more user friendly linux environment in servers, something that has annoyed you a lot? a lot of things are done in the unix way, but maybe we should reinvent the wheel in some areas, cause apparently, its so...repeatingly today and difficult to do easy tasks. it should be easier i think..

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• Compiling Objective-C project on Linux (Ubuntu)

  - by Alex

  How to make an Objective-C project work on Ubuntu? My files are: Fraction.h #import <Foundation/NSObject.h> @interface Fraction: NSObject { int numerator; int denominator; } -(void) print; -(void) setNumerator: (int) n; -(void) setDenominator: (int) d; -(int) numerator; -(int) denominator; @end Fraction.m #import "Fraction.h" #import <stdio.h> @implementation Fraction -(void) print { printf( "%i/%i", numerator, denominator ); } -(void) setNumerator: (int) n { numerator = n; } -(void) setDenominator: (int) d { denominator = d; } -(int) denominator { return denominator; } -(int) numerator { return numerator; } @end main.m #import <stdio.h> #import "Fraction.h" int main( int argc, const char *argv[] ) { // create a new instance Fraction *frac = [[Fraction alloc] init]; // set the values [frac setNumerator: 1]; [frac setDenominator: 3]; // print it printf( "The fraction is: " ); [frac print]; printf( "\n" ); // free memory [frac release]; return 0; } I've tried two approaches to compile it: Pure gcc: $ sudo apt-get install gobjc gnustep gnustep-devel $ gcc `gnustep-config --objc-flags` -o main main.m -lobjc -lgnustep-base /tmp/ccIQKhfH.o:(.data.rel+0x0): undefined reference to `__objc_class_name_Fraction' I created a GNUmakefile Makefile: include ${GNUSTEP_MAKEFILES}/common.make TOOL_NAME = main main_OBJC_FILES = main.m include ${GNUSTEP_MAKEFILES}/tool.make ... and ran: $ source /usr/share/GNUstep/Makefiles/GNUstep.sh $ make Making all for tool main... Linking tool main ... ./obj/main.o:(.data.rel+0x0): undefined reference to `__objc_class_name_Fraction' So in both cases compiler gets stuck at undefined reference to `__objc_class_name_Fraction' Do you have and idea how to resolve this issue?

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• How do I install websocket module for Node.js on Debian VPS?

  - by Ollie Shaw

  I currently am renting a VPS from Dreamhost which runs Debian. I am still learning command line on this OS, but fast! I have successfully installed Node.js, now I want to install the websocket module found here: https://github.com/Worlize/WebSocket-Node From the root user, I have run the following command: npm install websocket The error thrown is: [websocket v1.0.7] Native code compile failed!! On Windows, native extensions require Visual Studio and Python. On Unix, native extensions require Python, make and a C++ compiler. Start npm with --websocket:verbose to show compilation output (if any). What commands should I issue to install this websocket module and its requirements? Thanks very much! Edit: When I run sudo apt-get install gcc make I get this message: Reading package lists... Done Building dependency tree Reading state information... Done gcc is already the newest version. gcc set to manually installed. make is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded. And the same error when trying to install WebSocket.

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• Script to install and compile Python, Django, Virtualenv, Mercurial, Git, LessCSS, etc... on Dreamho

  - by tmslnz

  The Story After cleaning up my Dreamhost shared server's home folder from all the cruft accumulated over time, I decided to start afresh and compile/reinstall Python. All tutorials and snippets I found seemed overly simplistic, assuming (or ignoring) a bunch of dependencies needed by Python to compile all modules correctly. So, starting from http://andrew.io/weblog/2010/02/installing-python-2-6-virtualenv-and-virtualenvwrapper-on-dreamhost/ (so far the best guide I found), I decided to write a set-and-forget Bash script to automate this painful process, including along the way a bunch of other things I am planning to use. The Script I am hosting the script on http://bitbucket.org/tmslnz/python-dreamhost-batch/src/ The TODOs So far it runs fine, and does all it needs to do in about 900 seconds, giving me at the end of the process a fully functional Python / Mercurial / etc... setup without even needing to log out and back in. I though this might be of use for others too, but there are a few things that I think it's missing and I am not quite sure how to go for it, what's the best way to do it, or if this just doesn't make any sense at all. Check for errors and break Check for minor version bumps of the packages and give warnings Check for known dependencies Use arguments to install only some of the packages instead of commenting out lines Organise the code in a manner that's easy to update Optionally make the installers and compiling silent, with error logging to file failproof .bashrc modification to prevent breaking ssh logins and having to log back via FTP to fix it EDIT: The implied question is: can anyone, more bashful than me, offer general advice on the worthiness of the above points or highlight any problems they see with this approach? (see my answer to Ry4an's comment below) The Gist I am no UNIX or Bash or compiler expert, and this has been built iteratively, by trial and error. It is somehow going towards apt-get (well, 1% of it...), but since Dreamhost and others obviously cannot give root access on shared servers, this looks to me like a potentially very useful workaround; particularly so with some community work involved.

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• PHP package manager

  - by Mathias

  Hey, does anyone know a package manager library for PHP (as e.g. apt or yum for linux distros) apart from PEAR? I'm working on a system which should include a package management system for module management. I managed to get a working solution using PEAR, but using the PEAR client for anything else than managing a PEAR installation is not really the optimal solution as it's not designed for that. I would have to modify/extend it (e.g. to implement actions on installation/upgrade or to move PEAR specific files like lockfiles away from the system root) and especially the CLI client code is quite messy and PHP4. So maybe someone has some suggestions for an alternative PEAR client library which is easy to use and extend (the server side has some nice implementations like Pirum and pearhub) for completely different package management systems written in PHP (ideally including dependency tracking and different channels) for some general ideas how to implement such a PM system (yes, I'm still tinkering with the idea of implementing such a system from scratch) I know that big systems like Magento and symfony use PEAR for their PM. Magento uses a hacked version of the original PEAR client (which I'd like to avoid), symfony's implementation seems quite integrated with the framework, but would be a good starting point to at least write the client from scratch. Anyway, if anybody has suggestions: please :)

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• How can I cluster short messages [Tweets] based on topic ? [Topic Based Clustering]

  - by Jagira

  Hello, I am planning an application which will make clusters of short messages/tweets based on topics. The number of topics will be limited like Sports [ NBA, NFL, Cricket, Soccer ], Entertainment [ movies, music ] and so on... I can think of two approaches to this Ask for users to tag questions like Stackoverflow does. Users can select tags from a predefined list of tags. Then on server side I will cluster them on based of tags. Pros:- Simple design. Less complexity in code. Cons:- Choices for users will be restricted. Clusters will not be dynamic. If a new event occurs, the predefined tags will miss it. Take the message, delete the stopwords [ predefined in a dictionary ] and apply some clustering algorithm to make a cluster and depending on its popularity, display the cluster. The cluster will be maintained according to its sustained popularity. New messages will be skimmed and assigned to corresponding clusters. Pros:- Dynamic clustering based on the popularity of the event/accident. Cons:- Increased complexity. More server resources required. I would like to know whether there are any other approaches to this problem. Or are there any ways of improving the above mentioned methods? Also suggest some good clustering algorithms.I think "K-Nearest Clustering" algorithm is apt for this situation.

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• Installing a group of .deb files in Ubuntu

  - by p00ya

  Hi. I have a directory of .deb files which I copied from the cache folder of apt. There are many applications and Ubuntu updates among them. but there's no dependency failure because they were all downloaded by 'add/remove applications' and 'update manager' automatically. Now I have installed the same version of Ubuntu (9.04) and I want to install those apps and updates again(though they are not new versions). In other words, I want to make this fresh Ubuntu install exactly like the old one but without downloading any thing and using only those .deb files that I copied. All I have is an archive folder containing the .deb files and a 'pkgcache.bin' file. I know I can double-click the .deb files and install them manually but then I have to find out and follow the dependencies one by one from the installer errors. I have also tried adding an offline repository but it didn't work. I think because all of my .deb's are in on folder, and there is no separate 'main', 'restricted', ... folder?! Is there a way to do all of this automatically? thanks

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• And now for a complete change of direction from C++ function pointers

  - by David

  I am building a part of a simulator. We are building off of a legacy simulator, but going in different direction, incorporating live bits along side of the simulated bits. The piece I am working on has to, effectively route commands from the central controller to the various bits. In the legacy code, there is a const array populated with an enumerated type. A command comes in, it is looked up in the table, then shipped off to a switch statement keyed by the enumerated type. The type enumeration has a choice VALID_BUT_NOT_SIMULATED, which is effectively a no-op from the point of the sim. I need to turn those no-ops into commands to actual other things [new simulated bits| live bits]. The new stuff and the live stuff have different interfaces than the old stuff [which makes me laugh about the shill job that it took to make it all happen, but that is a topic for a different discussion]. I like the array because it is a very apt description of the live thing this chunk is simulating [latching circuits by row and column]. I thought that I would try to replace the enumerated types in the array with pointers to functions and call them directly. This would be in lieu of the lookup+switch.

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