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  • Amazon EC2 Instance - m1.medium Ubuntu 12.04 - Started to crash three days ago

    - by Joy
    The environment: Amazon EC2 Instance - m1.medium Ubuntu 12.04 Apache 2.2.22 - Running a Drupal Site Using MySQL DB Server RAM info: ~$ free -gt total used free shared buffers cached Mem: 3 1 2 0 0 0 -/+ buffers/cache: 0 2 Swap: 0 0 0 Total: 3 1 2 Hard drive info: Filesystem Size Used Avail Use% Mounted on /dev/xvda1 7.9G 4.7G 2.9G 62% / udev 1.9G 8.0K 1.9G 1% /dev tmpfs 751M 180K 750M 1% /run none 5.0M 0 5.0M 0% /run/lock none 1.9G 0 1.9G 0% /run/shm /dev/xvdb 394G 199M 374G 1% /mnt The problem About two days ago the site started failing becaue the MySQL server was shut down by Apache with the following message: kernel: [2963685.664359] [31716] 106 31716 226946 22748 0 0 0 mysqld kernel: [2963685.664730] Out of memory: Kill process 31716 (mysqld) score 23 or sacrifice child kernel: [2963685.664764] Killed process 31716 (mysqld) total-vm:907784kB, anon-rss:90992kB, file-rss:0kB kernel: [2963686.153608] init: mysql main process (31716) killed by KILL signal kernel: [2963686.169294] init: mysql main process ended, respawning That states that the VM was occupying 0.9GB, but my Ram has 2GB free, so 1GB was still left free. I understand that in Linux applications can allocate more memory than physically available. I don't know if this is the problme, it's the first time that it has started to happen. Obviously, the MySQL server tries to restart, but there's no memory for it apparently and it won't restart. Here is its error log: Plugin 'FEDERATED' is disabled. The InnoDB memory heap is disabled Mutexes and rw_locks use GCC atomic builtins Compressed tables use zlib 1.2.3.4 Initializing buffer pool, size = 128.0M InnoDB: mmap(137363456 bytes) failed; errno 12 Completed initialization of buffer pool Fatal error: cannot allocate memory for the buffer pool Plugin 'InnoDB' init function returned error. Plugin 'InnoDB' registration as a STORAGE ENGINE failed. Unknown/unsupported storage engine: InnoDB [ERROR] Aborting [Note] /usr/sbin/mysqld: Shutdown complete I simply restarted the Mysql service. About two hours later it happened again. I restarted it. Then it happened again 9 hours later. So then I thought of the MaxClients parameter of apache.conf, so I went to check it out. It was set at 150. I decided to drop it down to 60. As so: <IfModule mpm_prefork_module> ... MaxClients 60 </IfModule> <IfModule mpm_worker_module> ... MaxClients 60 </IfModule> <IfModule mpm_event_module> ... MaxClients 60 </IfModule> Once I did that, I had the apache2 service restart and it all went smoothly for 3/4 of a day. Since at night the MySQL service shut down once again, but this time it wasn't killed by the Apache2 service. Instead it called the OOM-Killer with the following message: kernel: [3104680.005312] mysqld invoked oom-killer: gfp_mask=0x201da, order=0, oom_adj=0, oom_score_adj=0 kernel: [3104680.005351] [<ffffffff81119795>] oom_kill_process+0x85/0xb0 kernel: [3104680.548860] init: mysql main process (30821) killed by KILL signal Now I'm out of ideas. Some articles state that the ideal thing to do is change the kernel behaviour with the following (include it to the file /etc/sysctl.conf ) vm.overcommit_memory = 2 vm.overcommit_ratio = 80 So no overcommits will take place. I'm wondering if this is the way to go? Keep in mind I'm no server administrator, I have basic knowldege. Thanks a bunch in advance.

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  • 2010 Collaboration Summit Impressions

    - by Elena Zannoni
    It's a bit late, but there you have it anyway. April 14 to 16 I attended the Linux Foundation Collaboration Summit in SFO. I was running two tracks, one on tracing and one on tools. You can see the tracks and the slides here: http://events.linuxfoundation.org/events/collaboration-summit/slides I was pretty busy both days, Thursday with a whole day tracing track, Friday with a half day toolchain track. The sessions were well attended, the rooms were full, with people spilling in the hallways. Some new things were presented, like Kernelshark, by Steve Rostedt, a GUI (yes, believe it or not, a GUI) written in GTK. It is very nice, showing a timeline for traced kernel events, and you can zoom in and filter at will. It works on the latest kernels, and it requires some new things/fixes in GTK. I don't recall exactly what version of GTK though. Dominique Toupin from Ericsson presented something about user requirements for tracing. Mostly though about who's who in the embedded world, and eclipse. Masami and Mathieu presented an update on their work. See their slides. The interesting thing to me was of course the new version of uprobes w/o underlying utrace presented by Jim Keniston. At the end of the session we had a discussion about the future of utrace. Roland wasn't there, butTom Tromey (also from RedHat) collected the feedback. Basically we are at a standstill now that utrace has been rejected yet again. There wasn't much advise that anybody could give, except jokingly, we decided that the only way in is to make it a part of perf events. There needs to be another refactoring, but most of all, this "killer app" that would be enabled because of utrace hasn't materialized yet. We think that having a good debugging story on Linux is enough of a killer app, for instance allowing multiple tracers, and not relying on SIGCHLD etc. I think this wasn't completely clear to the kernel community. Trying to achieve debugging via a gdb stub inside the kernel interfacing to utrace and that is controlled via the gdb remote protocol also lost its appeal (thankfully, since the gdb remote protocol is archaic). Somebody would have to be creative in how to submit utrace. It doesn't have to be called utrace (it was really a random choice, for lack of a letter that was not already used in front of the word "trace"). So basically, I think the ideas behind utrace are sound, and the necessity of a new interface is acknowledged. But I believe the integration/submission process with the kernel folks has to restart from scratch, clean slate. We'll see. There are many conferences and meetings coming up in the near future where things can be discussed further. On the second day, Friday, we had the tools talks. It was interesting to observe the more "kernel" oriented people's behavior towards the gcc etc community. The first talk was by Mark Mitchell, about Gcc and its new plugin architecture. After that, Paolo talked about the new C++1x standard, which will be finalized in 2011. Many features are already implemented in the libstdc++ library and gcc and usable today. We had a few minutes (really, the half day track was quite short) where Bradley Kuhn from the Software Freedom Law Center explained the GPLv3 exception for gcc (due to the new gcc plugin architecture and the availability of the intermediate results from the compilation, which is a new thing). I will not try to explain, but basically you cannot take the result of the preprocessing and then use that in your own proprietary compiler. After, we had a talk by Ian Taylor about the new Gold linker. One good thing in that area is that they are trying to make gold the new default linker (for instance Fedora will use gold as the distro linker). However gold is very different from binutils' old linker. It doesn't use a linker script, for instance. The kernel has been linked with gold many times as an exercise (the ground work was done by Kris Van Hees), but this needs to be constantly tested/monitored because the kernel linker script is very complex, and uses esoteric features (Wenji is now monitoring that each kernel RC can be built with gold). It was positive that people are now aware of gold and the need for it to be ported to more architectures. It seems that the porting is very easy, with little arch dependent code. Finally Tom Tromey presented about gdb and the archer project. Archer is a development branch of gdb mostly done by RedHat, where they are focusing on better c++ printing, c++ expression parsing, and plugins. The archer work is merged regularly in the gdb mainline. In general it was a good conference. I did miss most of the first day, because that's when I flew in. But I caught a couple of talks. Nothing earth shattering, except for Google giving each person registered a free Android phone. Yey.

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  • MAAS not working

    - by Zimika
    I'm trying a whole week to make MASS to work, but no results. This is the procedure: maas createsuperuser sudo apt-get install maas-dhcp maas-import-isos apt-get install maas-enlist tftpd-hpa maas-import-isos After this I start node machine with PXE as default first boot device, and select option maas-enlist. Sistem start to installing some things, and after that on MAAS WebUI stand 1 node. But when I click on Node button on WebUI or refresh page, it show 0 node. Command cobbler system list showing: root@maas-serv:~# cobbler system list default node-3ee116ea-a8b2-11e1-a735-50e549e38206 Also, sometime this procedure register one node, but when registering second one, same problem like I described up. root@maas-serv:/var/lib/tftpboot/pxelinux.cfg# is empty, only default is there. On command maas-import-isos there is a one warning. ftpboot/images/precise-x86_64-maas-ephemeral/initrd copying images generating GPXE/PXE configuration files generating PXE menu structure warning: kernel option length exceeds 255 warning: kernel option length exceeds 255 warning: kernel option length exceeds 255 warning: kernel option length exceeds 255 copying files for distro: precise-x86_64

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  • CLSF & CLK 2013 Trip Report by Jeff Liu

    - by jamesmorris
    This is a contributed post from Jeff Liu, lead XFS developer for the Oracle mainline Linux kernel team. Recently, I attended both the China Linux Storage and Filesystem workshop (CLSF), and the China Linux Kernel conference (CLK), which were held in Shanghai. Here are the highlights for both events. CLSF - 17th October XFS update (led by Jeff Liu) XFS keeps rapid progress with a lot of changes, especially focused on the infrastructure/performance improvements as well as  new feature development.  This can be reflected with a sample statistics among XFS/Ext4+JBD2/Btrfs via: # git diff --stat --minimal -C -M v3.7..v3.12-rc4 -- fs/xfs|fs/ext4+fs/jbd2|fs/btrfs XFS: 141 files changed, 27598 insertions(+), 19113 deletions(-) Ext4+JBD2: 39 files changed, 10487 insertions(+), 5454 deletions(-) Btrfs: 70 files changed, 19875 insertions(+), 8130 deletions(-) What made up those changes in XFS? Self-describing metadata(CRC32c). This is a new feature and it contributed about 70% code changes, it can be enabled via `mkfs.xfs -m crc=1 /dev/xxx` for v5 superblock. Transaction log space reservation improvements. With this change, we can calculate the log space reservation at mount time rather than runtime to reduce the the CPU overhead. User namespace support. So both XFS and USERNS can be enabled on kernel configuration begin from Linux 3.10. Thanks Dwight Engen's efforts for this thing. Split project/group quota inodes. Originally, project quota can not be enabled with group quota at the same time because they were share the same quota file inode, now it works but only for v5 super block. i.e, CRC enabled. CONFIG_XFS_WARN, an new lightweight runtime debugger which can be deployed in production environment. Readahead log object recovery, this change can speed up the log replay progress significantly. Speculative preallocation inode tracking, clearing and throttling. The main purpose is to deal with inodes with post-EOF space due to speculative preallocation, support improved quota management to free up a significant amount of unwritten space when at or near EDQUOT. It support backgroup scanning which occurs on a longish interval(5 mins by default, tunable), and on-demand scanning/trimming via ioctl(2). Bitter arguments ensued from this session, especially for the comparison between Ext4 and Btrfs in different areas, I have to spent a whole morning of the 1st day answering those questions. We basically agreed on XFS is the best choice in Linux nowadays because: Stable, XFS has a good record in stability in the past 10 years. Fengguang Wu who lead the 0-day kernel test project also said that he has observed less error than other filesystems in the past 1+ years, I own it to the XFS upstream code reviewer, they always performing serious code review as well as testing. Good performance for large/small files, XFS does not works very well for small files has already been an old story for years. Best choice (maybe) for distributed PB filesystems. e.g, Ceph recommends delopy OSD daemon on XFS because Ext4 has limited xattr size. Best choice for large storage (>16TB). Ext4 does not support a single file more than around 15.95TB. Scalability, any objection to XFS is best in this point? :) XFS is better to deal with transaction concurrency than Ext4, why? The maximum size of the log in XFS is 2038MB compare to 128MB in Ext4. Misc. Ext4 is widely used and it has been proved fast/stable in various loads and scenarios, XFS just need more customers, and Btrfs is still on the road to be a manhood. Ceph Introduction (Led by Li Wang) This a hot topic.  Li gave us a nice introduction about the design as well as their current works. Actually, Ceph client has been included in Linux kernel since 2.6.34 and supported by Openstack since Folsom but it seems that it has not yet been widely deployment in production environment. Their major work is focus on the inline data support to separate the metadata and data storage, reduce the file access time, i.e, a file access need communication twice, fetch the metadata from MDS and then get data from OSD, and also, the small file access is limited by the network latency. The solution is, for the small files they would like to store the data at metadata so that when accessing a small file, the metadata server can push both metadata and data to the client at the same time. In this way, they can reduce the overhead of calculating the data offset and save the communication to OSD. For this feature, they have only run some small scale testing but really saw noticeable improvements. Test environment: Intel 2 CPU 12 Core, 64GB RAM, Ubuntu 12.04, Ceph 0.56.6 with 200GB SATA disk, 15 OSD, 1 MDS, 1 MON. The sequence read performance for 1K size files improved about 50%. I have asked Li and Zheng Yan (the core developer of Ceph, who also worked on Btrfs) whether Ceph is really stable and can be deployed at production environment for large scale PB level storage, but they can not give a positive answer, looks Ceph even does not spread over Dreamhost (subject to confirmation). From Li, they only deployed Ceph for a small scale storage(32 nodes) although they'd like to try 6000 nodes in the future. Improve Linux swap for Flash storage (led by Shaohua Li) Because of high density, low power and low price, flash storage (SSD) is a good candidate to partially replace DRAM. A quick answer for this is using SSD as swap. But Linux swap is designed for slow hard disk storage, so there are a lot of challenges to efficiently use SSD for swap. SWAPOUT swap_map scan swap_map is the in-memory data structure to track swap disk usage, but it is a slow linear scan. It will become a bottleneck while finding many adjacent pages in the use of SSD. Shaohua Li have changed it to a cluster(128K) list, resulting in O(1) algorithm. However, this apporoach needs restrictive cluster alignment and only enabled for SSD. IO pattern In most cases, the swap io is in interleaved pattern because of mutiple reclaimers or a free cluster is shared by all reclaimers. Even though block layer can merge interleaved IO to some extent, but we cannot count on it completely. Hence the per-cpu cluster is added base on the previous change, it can help reclaimer do sequential IO and the block layer will be easier to merge IO. TLB flush: If we're reclaiming one active page, we should first move the page from active lru list to inactive lru list, and then reclaim the page from inactive lru to swap it out. During the process, we need to clear PTE twice: first is 'A'(ACCESS) bit, second is 'P'(PRESENT) bit. Processors need to send lots of ipi which make the TLB flush really expensive. Some works have been done to improve this, including rework smp_call_functiom_many() or remove the first TLB flush in x86, but there still have some arguments here and only parts of works have been pushed to mainline. SWAPIN: Page fault does iodepth=1 sync io, but it's a little waste if only issue a page size's IO. The obvious solution is doing swap readahead. But the current in-kernel swap readahead is arbitary(always 8 pages), and it always doesn't perform well for both random and sequential access workload. Shaohua introduced a new flag for madvise(MADV_WILLNEED) to do swap prefetch, so the changes happen in userspace API and leave the in-kernel readahead unchanged(but I think some improvement can also be done here). SWAP discard As we know, discard is important for SSD write throughout, but the current swap discard implementation is synchronous. He changed it to async discard which allow discard and write run in the same time. Meanwhile, the unit of discard is also optimized to cluster. Misc: lock contention For many concurrent swapout and swapin , the lock contention such as anon_vma or swap_lock is high, so he changed the swap_lock to a per-swap lock. But there still have some lock contention in very high speed SSD because of swapcache address_space lock. Zproject (led by Bob Liu) Bob gave us a very nice introduction about the current memory compression status. Now there are 3 projects(zswap/zram/zcache) which all aim at smooth swap IO storm and promote performance, but they all have their own pros and cons. ZSWAP It is implemented based on frontswap API and it uses a dynamic allocater named Zbud to allocate free pages. Zbud means pairs of zpages are "buddied" and it can only store at most two compressed pages in one page frame, so the max compress ratio is 50%. Each page frame is lru-linked and can do shink in memory pressure. If the compressed memory pool reach its limitation, shink or reclaim happens. It decompress the page frame into two new allocated pages and then write them to real swap device, but it can fail when allocating the two pages. ZRAM Acts as a compressed ramdisk and used as swap device, and it use zsmalloc as its allocator which has high density but may have fragmentation issues. Besides, page reclaim is hard since it will need more pages to uncompress and free just one page. ZRAM is preferred by embedded system which may not have any real swap device. Now both ZRAM and ZSWAP are in driver/staging tree, and in the mm community there are some disscussions of merging ZRAM into ZSWAP or viceversa, but no agreement yet. ZCACHE Handles file page compression but it is removed out of staging recently. From industry (led by Tang Jie, LSI) An LSI engineer introduced several new produces to us. The first is raid5/6 cards that it use full stripe writes to improve performance. The 2nd one he introduced is SandForce flash controller, who can understand data file types (data entropy) to reduce write amplification (WA) for nearly all writes. It's called DuraWrite and typical WA is 0.5. What's more, if enable its Dynamic Logical Capacity function module, the controller can do data compression which is transparent to upper layer. LSI testing shows that with this virtual capacity enables 1x TB drive can support up to 2x TB capacity, but the application must monitor free flash space to maintain optimal performance and to guard against free flash space exhaustion. He said the most useful application is for datebase. Another thing I think it's worth to mention is that a NV-DRAM memory in NMR/Raptor which is directly exposed to host system. Applications can directly access the NV-DRAM via a memory address - using standard system call mmap(). He said that it is very useful for database logging now. This kind of NVM produces are beginning to appear in recent years, and it is said that Samsung is building a research center in China for related produces. IMHO, NVM will bring an effect to current os layer especially on file system, e.g. its journaling may need to redesign to fully utilize these nonvolatile memory. OCFS2 (led by Canquan Shen) Without a doubt, HuaWei is the biggest contributor to OCFS2 in the past two years. They have posted 46 upstream patches and 39 patches have been merged. Their current project is based on 32/64 nodes cluster, but they also tried 128 nodes at the experimental stage. The major work they are working is to support ATS (atomic test and set), it can be works with DLM at the same time. Looks this idea is inspired by the vmware VMFS locking, i.e, http://blogs.vmware.com/vsphere/2012/05/vmfs-locking-uncovered.html CLK - 18th October 2013 Improving Linux Development with Better Tools (Andi Kleen) This talk focused on how to find/solve bugs along with the Linux complexity growing. Generally, we can do this with the following kind of tools: Static code checkers tools. e.g, sparse, smatch, coccinelle, clang checker, checkpatch, gcc -W/LTO, stanse. This can help check a lot of things, simple mistakes, complex problems, but the challenges are: some are very slow, false positives, may need a concentrated effort to get false positives down. Especially, no static checker I found can follow indirect calls (“OO in C”, common in kernel): struct foo_ops { int (*do_foo)(struct foo *obj); } foo->do_foo(foo); Dynamic runtime checkers, e.g, thread checkers, kmemcheck, lockdep. Ideally all kernel code would come with a test suite, then someone could run all the dynamic checkers. Fuzzers/test suites. e.g, Trinity is a great tool, it finds many bugs, but needs manual model for each syscall. Modern fuzzers around using automatic feedback, but notfor kernel yet: http://taviso.decsystem.org/making_software_dumber.pdf Debuggers/Tracers to understand code, e.g, ftrace, can dump on events/oops/custom triggers, but still too much overhead in many cases to run always during debug. Tools to read/understand source, e.g, grep/cscope work great for many cases, but do not understand indirect pointers (OO in C model used in kernel), give us all “do_foo” instances: struct foo_ops { int (*do_foo)(struct foo *obj); } = { .do_foo = my_foo }; foo>do_foo(foo); That would be great to have a cscope like tool that understands this based on types/initializers XFS: The High Performance Enterprise File System (Jeff Liu) [slides] I gave a talk for introducing the disk layout, unique features, as well as the recent changes.   The slides include some charts to reflect the performances between XFS/Btrfs/Ext4 for small files. About a dozen users raised their hands when I asking who has experienced with XFS. I remembered that when I asked the same question in LinuxCon/Japan, only 3 people raised their hands, but they are Chris Mason, Ric Wheeler, and another attendee. The attendee questions were mainly focused on stability, and comparison with other file systems. Linux Containers (Feng Gao) The speaker introduced us that the purpose for those kind of namespaces, include mount/UTS/IPC/Network/Pid/User, as well as the system API/ABI. For the userspace tools, He mainly focus on the Libvirt LXC rather than us(LXC). Libvirt LXC is another userspace container management tool, implemented as one type of libvirt driver, it can manage containers, create namespace, create private filesystem layout for container, Create devices for container and setup resources controller via cgroup. In this talk, Feng also mentioned another two possible new namespaces in the future, the 1st is the audit, but not sure if it should be assigned to user namespace or not. Another is about syslog, but the question is do we really need it? In-memory Compression (Bob Liu) Same as CLSF, a nice introduction that I have already mentioned above. Misc There were some other talks related to ACPI based memory hotplug, smart wake-affinity in scheduler etc., but my head is not big enough to record all those things. -- Jeff Liu

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  • Information Indepth Newsletter - Linux Edition

    - by Paulo Folgado
    INFORMATION INDEPTH NEWSLETTERLinux Edition February 2011 Stay Connected:  NEWS Now Available: Oracle Linux 6 Get the latest release of Oracle Linux 6, which includes Unbreakable Enterprise Kernel.Download Oracle Linux 6 Read More Customers Succeed by Using Oracle Exadata with Oracle Linux Watch IT executives from Bank of America, Linkshare, and Johns Hopkins as they talk about the business challenges they faced and why they chose to use Oracle Linux along with Oracle Exadata as the solution. Watch Now Video Interview: Oracle Senior Vice President Wim Coekaerts Watch Wim Coekaerts, senior vice president, Linux and Virtualization Engineering, as he talks about use cases for Oracle VM Templates as well as the Unbreakable Enterprise Kernel for Linux.Watch Now Hot Off the Press: Migrate Your IBM AIX Environment to Oracle Linux This new white paper provides recommendations for planning and implementing the migration of applications from an IBM Power System running AIX to Oracle's Sun Fire X4800 Server with Intel Xeon 7560 Processor running Oracle Linux 5.5.Read More  Back to Top BLOGOSPHERE Just Launched: The Oracle Linux Blog Follow our new Oracle Linux blog  to hear the latest updates, product news, upcoming events, and all the latest happenings, directly from the Linux team at Oracle. Back to Top TECH DIVE NEW: Linux/Oracle Solaris CommandComparo Site from Oracle Technology NetworkThis site gives equivalent command syntax in Oracle Solaris 10 and Oracle Enterprise Linux 5 for common administrative tasks--focusing particularly on tasks that have tricky syntax or that you frequently need to double check. It acts as a quick reference for administrators who operate in these two OS environments. Free Download: Oracle Linux Release 5.6Did you know that by using Oracle Linux 5.5 or 5.6 along with the Unbreakable Enterprise Kernel, you can get all the benefits of Linux mainline kernel 2.6.32 and more, right now, without the need to reinstall or migrate to a new operating system such as RHEL6?Read Release NotesDownload Oracle Linux 5.6 LSB 4.0 Certification Completed for Oracle Linux 5.5Oracle Linux 5.5 with Unbreakable Enterprise Kernel successfully completed the LSB 4.0 certification.  Back to Top WEBCASTS Boost Your Linux Performance with Oracle's Enhancements in Infiniband and RDSRegister to hear Director of Kernel Engineering Chris Mason cover scalability and performance improvements in Linux environment. Get the Facts Oracle's Unbreakable Enterprise KernelSVP Wim Coekaerts and Senior Director Monica Kumar cover the facts about and benefits of using Unbreakable Enterprise Kernel.  View Other Webcasts on Demand   Back to Top EVENTS Collaborate 2011April 10-14 Orlando, Florida Cloud Summit Events, WorldwideVarious dates (check the city for date/time of event) Datacenter Efficiency Events WorldwideThese events include Linux and Oracle VM sessions.Various dates (check the city for date/time of event) Virtualization Events in North America Find an Oracle Event  Back to Top EDUCATION Get Oracle Linux Certified from Oracle University Oracle University offers courses in both Oracle Linux and the administration of Oracle Database on Linux.  Back to Top CUSTOMER SPOTLIGHT Pella Corporation Improves IT Performance and Efficiency with Oracle Linux and Oracle VM To improve IT performance and efficiency and lower operational costs, Pella Corporation, has standardized on Oracle VM and Oracle Linux. Read More Disney Store Deploys POS in 330 Stores and 7 Countries on Oracle Linux Disney Store is running 1,500 registers worldwide on a broad Oracle technology software stack including Oracle Database 11g, Oracle Fusion Middleware, and Oracle Linux. Read More Back to Top PARTNER SPOTLIGHT Emulex and Oracle Announce Data Integrity Features The Unbreakable Enterprise Kernel provides data integrity checking between Oracle Database applications and Emulex 8Gb/s LightPulse Fibre Channel Host Bus Adapters. Read More Dell Inc. Dell Inc. tested and validated configurations support Oracle Linux. Back to Top STAY IN TOUCH Follow @ORCL_Linux on Twitter for the latest penguin tweets Bookmark Oracle.com/Linux Read the Oracle Linux blog Back to Top  Oracle Information InDepth newsletters bring targeted news, articles, customer stories, and special offers to business people who want to find out how to streamline enterprise information management, measure results, improve business processes, and communicate a single truth to their constituents. Please send questions or comments to [email protected]. For answers to questions about subscribing, unsubscribing, and managing your Oracle e-mail communications preferences, please see the Oracle E-Mail Communications page. Copyright © 2011, Oracle Corporation and/or its affiliates. All rights reserved. Oracle is a registered trademark of Oracle Corporation and/or its affiliates. Other names may be trademarks of their respective owners. This document is provided for information purposes only, and the contents hereof are subject to change without notice. This document is not warranted to be error-free, nor is it subject to any other warranties or conditions, whether expressed orally or implied in law, including implied warranties and conditions of merchantability or fitness for a particular purpose. We specifically disclaim any liability with respect to this document, and no contractual obligations are formed either directly or indirectly by this document. This document may not be reproduced or transmitted in any form or by any means, electronic or mechanical, for any purpose, without our prior written permission. 

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  • Computer crashes on resume from standby almost every time

    - by Los Frijoles
    I am running Ubuntu 12.04 on a Core i5 2500K and ASRock Z68 Pro3-M motherboard (no graphics card, hd is a WD Green 1TB, and cd drive is some cheap lite-on drive). Since installing 12.04, my computer has been freezing after resume, but not every time. When I start to resume, it starts going normally with a blinking cursor on the screen and then sometimes it will continue on to the gnome 3 unlock screen. Most of the time, however, it will blink for a little bit and then the monitor will flip modes and shut off due to no signal. Pressing keys on the keyboard gets no response (num lock light doesn't respond, Ctrl-Alt-F1 fails to drop it into a terminal, Ctrl-Alt-Backspace doesn't work) and so I assume the computer is crashed. The worst part is, the logs look entirely normal. Here is my system log during one of these crashes and my subsequent hard poweroff and restart: Jun 6 21:54:43 kcuzner-desktop udevd[10448]: inotify_add_watch(6, /dev/dm-2, 10) failed: No such file or directory Jun 6 21:54:43 kcuzner-desktop udevd[10448]: inotify_add_watch(6, /dev/dm-2, 10) failed: No such file or directory Jun 6 21:54:43 kcuzner-desktop udevd[10448]: inotify_add_watch(6, /dev/dm-1, 10) failed: No such file or directory Jun 6 21:54:43 kcuzner-desktop udevd[12419]: inotify_add_watch(6, /dev/dm-0, 10) failed: No such file or directory Jun 6 21:54:43 kcuzner-desktop udevd[10448]: inotify_add_watch(6, /dev/dm-0, 10) failed: No such file or directory Jun 6 22:09:01 kcuzner-desktop CRON[9061]: (root) CMD ( [ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) ! -execdir fuser -s {} 2>/dev/null \; -delete) Jun 6 22:17:01 kcuzner-desktop CRON[22142]: (root) CMD ( cd / && run-parts --report /etc/cron.hourly) Jun 6 22:39:01 kcuzner-desktop CRON[26909]: (root) CMD ( [ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) ! -execdir fuser -s {} 2>/dev/null \; -delete) Jun 6 22:54:21 kcuzner-desktop kernel: [57905.560822] show_signal_msg: 36 callbacks suppressed Jun 6 22:54:21 kcuzner-desktop kernel: [57905.560828] chromium-browse[9139]: segfault at 0 ip 00007f3a78efade0 sp 00007fff7e2d2c18 error 4 in chromium-browser[7f3a76604000+412b000] Jun 6 23:05:43 kcuzner-desktop kernel: [58586.415158] chromium-browse[21025]: segfault at 0 ip 00007f3a78efade0 sp 00007fff7e2d2c18 error 4 in chromium-browser[7f3a76604000+412b000] Jun 6 23:09:01 kcuzner-desktop CRON[13542]: (root) CMD ( [ -x /usr/lib/php5/maxlifetime ] && [ -d /var/lib/php5 ] && find /var/lib/php5/ -depth -mindepth 1 -maxdepth 1 -type f -cmin +$(/usr/lib/php5/maxlifetime) ! -execdir fuser -s {} 2>/dev/null \; -delete) Jun 6 23:12:43 kcuzner-desktop kernel: [59006.317590] usb 2-1.7: USB disconnect, device number 8 Jun 6 23:12:43 kcuzner-desktop kernel: [59006.319672] sd 7:0:0:0: [sdg] Synchronizing SCSI cache Jun 6 23:12:43 kcuzner-desktop kernel: [59006.319737] sd 7:0:0:0: [sdg] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK Jun 6 23:17:01 kcuzner-desktop CRON[26580]: (root) CMD ( cd / && run-parts --report /etc/cron.hourly) Jun 6 23:19:04 kcuzner-desktop acpid: client connected from 29925[0:0] Jun 6 23:19:04 kcuzner-desktop acpid: 1 client rule loaded Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Successfully made thread 30131 of process 30131 (n/a) owned by '104' high priority at nice level -11. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Supervising 1 threads of 1 processes of 1 users. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Successfully made thread 30162 of process 30131 (n/a) owned by '104' RT at priority 5. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Supervising 2 threads of 1 processes of 1 users. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Successfully made thread 30163 of process 30131 (n/a) owned by '104' RT at priority 5. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Supervising 3 threads of 1 processes of 1 users. Jun 6 23:19:07 kcuzner-desktop bluetoothd[1140]: Endpoint registered: sender=:1.239 path=/MediaEndpoint/HFPAG Jun 6 23:19:07 kcuzner-desktop bluetoothd[1140]: Endpoint registered: sender=:1.239 path=/MediaEndpoint/A2DPSource Jun 6 23:19:07 kcuzner-desktop bluetoothd[1140]: Endpoint registered: sender=:1.239 path=/MediaEndpoint/A2DPSink Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Successfully made thread 30166 of process 30166 (n/a) owned by '104' high priority at nice level -11. Jun 6 23:19:07 kcuzner-desktop rtkit-daemon[1835]: Supervising 4 threads of 2 processes of 1 users. Jun 6 23:19:07 kcuzner-desktop pulseaudio[30166]: [pulseaudio] pid.c: Daemon already running. Jun 6 23:19:10 kcuzner-desktop acpid: client 2942[0:0] has disconnected Jun 6 23:19:10 kcuzner-desktop acpid: client 29925[0:0] has disconnected Jun 6 23:19:10 kcuzner-desktop acpid: client connected from 1286[0:0] Jun 6 23:19:10 kcuzner-desktop acpid: 1 client rule loaded Jun 6 23:19:31 kcuzner-desktop bluetoothd[1140]: Endpoint unregistered: sender=:1.239 path=/MediaEndpoint/HFPAG Jun 6 23:19:31 kcuzner-desktop bluetoothd[1140]: Endpoint unregistered: sender=:1.239 path=/MediaEndpoint/A2DPSource Jun 6 23:19:31 kcuzner-desktop bluetoothd[1140]: Endpoint unregistered: sender=:1.239 path=/MediaEndpoint/A2DPSink Jun 6 23:28:12 kcuzner-desktop kernel: imklog 5.8.6, log source = /proc/kmsg started. Jun 6 23:28:12 kcuzner-desktop rsyslogd: [origin software="rsyslogd" swVersion="5.8.6" x-pid="1053" x-info="http://www.rsyslog.com"] start Jun 6 23:28:12 kcuzner-desktop rsyslogd: rsyslogd's groupid changed to 103 Jun 6 23:28:12 kcuzner-desktop rsyslogd: rsyslogd's userid changed to 101 Jun 6 23:28:12 kcuzner-desktop rsyslogd-2039: Could not open output pipe '/dev/xconsole' [try http://www.rsyslog.com/e/2039 ] Jun 6 23:28:12 kcuzner-desktop modem-manager[1070]: <info> Loaded plugin Ericsson MBM Jun 6 23:28:12 kcuzner-desktop modem-manager[1070]: <info> Loaded plugin Sierra Jun 6 23:28:12 kcuzner-desktop modem-manager[1070]: <info> Loaded plugin Generic Jun 6 23:28:12 kcuzner-desktop modem-manager[1070]: <info> Loaded plugin Huawei Jun 6 23:28:12 kcuzner-desktop modem-manager[1070]: <info> Loaded plugin Linktop Jun 6 23:28:12 kcuzner-desktop bluetoothd[1072]: Failed to init gatt_example plugin Jun 6 23:28:12 kcuzner-desktop bluetoothd[1072]: Listening for HCI events on hci0 Jun 6 23:28:12 kcuzner-desktop NetworkManager[1080]: <info> NetworkManager (version 0.9.4.0) is starting... Jun 6 23:28:12 kcuzner-desktop NetworkManager[1080]: <info> Read config file /etc/NetworkManager/NetworkManager.conf Jun 6 23:28:12 kcuzner-desktop NetworkManager[1080]: <info> VPN: loaded org.freedesktop.NetworkManager.pptp Jun 6 23:28:12 kcuzner-desktop NetworkManager[1080]: <info> DNS: loaded plugin dnsmasq Jun 6 23:28:12 kcuzner-desktop kernel: [ 0.000000] Initializing cgroup subsys cpuset Jun 6 23:28:12 kcuzner-desktop kernel: [ 0.000000] Initializing cgroup subsys cpu Sorry it's so huge; the restart happens at 23:28:12 I believe and all I see is that chromium segfaulted a few times. I wouldn't think a segfault from an individual program on the computer would crash it, but could that be the issue?

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  • Optimizing Solaris 11 SHA-1 on Intel Processors

    - by danx
    SHA-1 is a "hash" or "digest" operation that produces a 160 bit (20 byte) checksum value on arbitrary data, such as a file. It is intended to uniquely identify text and to verify it hasn't been modified. Max Locktyukhin and others at Intel have improved the performance of the SHA-1 digest algorithm using multiple techniques. This code has been incorporated into Solaris 11 and is available in the Solaris Crypto Framework via the libmd(3LIB), the industry-standard libpkcs11(3LIB) library, and Solaris kernel module sha1. The optimized code is used automatically on systems with a x86 CPU supporting SSSE3 (Intel Supplemental SSSE3). Intel microprocessor architectures that support SSSE3 include Nehalem, Westmere, Sandy Bridge microprocessor families. Further optimizations are available for microprocessors that support AVX (such as Sandy Bridge). Although SHA-1 is considered obsolete because of weaknesses found in the SHA-1 algorithm—NIST recommends using at least SHA-256, SHA-1 is still widely used and will be with us for awhile more. Collisions (the same SHA-1 result for two different inputs) can be found with moderate effort. SHA-1 is used heavily though in SSL/TLS, for example. And SHA-1 is stronger than the older MD5 digest algorithm, another digest option defined in SSL/TLS. Optimizations Review SHA-1 operates by reading an arbitrary amount of data. The data is read in 512 bit (64 byte) blocks (the last block is padded in a specific way to ensure it's a full 64 bytes). Each 64 byte block has 80 "rounds" of calculations (consisting of a mixture of "ROTATE-LEFT", "AND", and "XOR") applied to the block. Each round produces a 32-bit intermediate result, called W[i]. Here's what each round operates: The first 16 rounds, rounds 0 to 15, read the 512 bit block 32 bits at-a-time. These 32 bits is used as input to the round. The remaining rounds, rounds 16 to 79, use the results from the previous rounds as input. Specifically for round i it XORs the results of rounds i-3, i-8, i-14, and i-16 and rotates the result left 1 bit. The remaining calculations for the round is a series of AND, XOR, and ROTATE-LEFT operators on the 32-bit input and some constants. The 32-bit result is saved as W[i] for round i. The 32-bit result of the final round, W[79], is the SHA-1 checksum. Optimization: Vectorization The first 16 rounds can be vectorized (computed in parallel) because they don't depend on the output of a previous round. As for the remaining rounds, because of step 2 above, computing round i depends on the results of round i-3, W[i-3], one can vectorize 3 rounds at-a-time. Max Locktyukhin found through simple factoring, explained in detail in his article referenced below, that the dependencies of round i on the results of rounds i-3, i-8, i-14, and i-16 can be replaced instead with dependencies on the results of rounds i-6, i-16, i-28, and i-32. That is, instead of initializing intermediate result W[i] with: W[i] = (W[i-3] XOR W[i-8] XOR W[i-14] XOR W[i-16]) ROTATE-LEFT 1 Initialize W[i] as follows: W[i] = (W[i-6] XOR W[i-16] XOR W[i-28] XOR W[i-32]) ROTATE-LEFT 2 That means that 6 rounds could be vectorized at once, with no additional calculations, instead of just 3! This optimization is independent of Intel or any other microprocessor architecture, although the microprocessor has to support vectorization to use it, and exploits one of the weaknesses of SHA-1. Optimization: SSSE3 Intel SSSE3 makes use of 16 %xmm registers, each 128 bits wide. The 4 32-bit inputs to a round, W[i-6], W[i-16], W[i-28], W[i-32], all fit in one %xmm register. The following code snippet, from Max Locktyukhin's article, converted to ATT assembly syntax, computes 4 rounds in parallel with just a dozen or so SSSE3 instructions: movdqa W_minus_04, W_TMP pxor W_minus_28, W // W equals W[i-32:i-29] before XOR // W = W[i-32:i-29] ^ W[i-28:i-25] palignr $8, W_minus_08, W_TMP // W_TMP = W[i-6:i-3], combined from // W[i-4:i-1] and W[i-8:i-5] vectors pxor W_minus_16, W // W = (W[i-32:i-29] ^ W[i-28:i-25]) ^ W[i-16:i-13] pxor W_TMP, W // W = (W[i-32:i-29] ^ W[i-28:i-25] ^ W[i-16:i-13]) ^ W[i-6:i-3]) movdqa W, W_TMP // 4 dwords in W are rotated left by 2 psrld $30, W // rotate left by 2 W = (W >> 30) | (W << 2) pslld $2, W_TMP por W, W_TMP movdqa W_TMP, W // four new W values W[i:i+3] are now calculated paddd (K_XMM), W_TMP // adding 4 current round's values of K movdqa W_TMP, (WK(i)) // storing for downstream GPR instructions to read A window of the 32 previous results, W[i-1] to W[i-32] is saved in memory on the stack. This is best illustrated with a chart. Without vectorization, computing the rounds is like this (each "R" represents 1 round of SHA-1 computation): RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR With vectorization, 4 rounds can be computed in parallel: RRRRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRR Optimization: AVX The new "Sandy Bridge" microprocessor architecture, which supports AVX, allows another interesting optimization. SSSE3 instructions have two operands, a input and an output. AVX allows three operands, two inputs and an output. In many cases two SSSE3 instructions can be combined into one AVX instruction. The difference is best illustrated with an example. Consider these two instructions from the snippet above: pxor W_minus_16, W // W = (W[i-32:i-29] ^ W[i-28:i-25]) ^ W[i-16:i-13] pxor W_TMP, W // W = (W[i-32:i-29] ^ W[i-28:i-25] ^ W[i-16:i-13]) ^ W[i-6:i-3]) With AVX they can be combined in one instruction: vpxor W_minus_16, W, W_TMP // W = (W[i-32:i-29] ^ W[i-28:i-25] ^ W[i-16:i-13]) ^ W[i-6:i-3]) This optimization is also in Solaris, although Sandy Bridge-based systems aren't widely available yet. As an exercise for the reader, AVX also has 256-bit media registers, %ymm0 - %ymm15 (a superset of 128-bit %xmm0 - %xmm15). Can %ymm registers be used to parallelize the code even more? Optimization: Solaris-specific In addition to using the Intel code described above, I performed other minor optimizations to the Solaris SHA-1 code: Increased the digest(1) and mac(1) command's buffer size from 4K to 64K, as previously done for decrypt(1) and encrypt(1). This size is well suited for ZFS file systems, but helps for other file systems as well. Optimized encode functions, which byte swap the input and output data, to copy/byte-swap 4 or 8 bytes at-a-time instead of 1 byte-at-a-time. Enhanced the Solaris mdb(1) and kmdb(1) debuggers to display all 16 %xmm and %ymm registers (mdb "$x" command). Previously they only displayed the first 8 that are available in 32-bit mode. Can't optimize if you can't debug :-). Changed the SHA-1 code to allow processing in "chunks" greater than 2 Gigabytes (64-bits) Performance I measured performance on a Sun Ultra 27 (which has a Nehalem-class Xeon 5500 Intel W3570 microprocessor @3.2GHz). Turbo mode is disabled for consistent performance measurement. Graphs are better than words and numbers, so here they are: The first graph shows the Solaris digest(1) command before and after the optimizations discussed here, contained in libmd(3LIB). I ran the digest command on a half GByte file in swapfs (/tmp) and execution time decreased from 1.35 seconds to 0.98 seconds. The second graph shows the the results of an internal microbenchmark that uses the Solaris libpkcs11(3LIB) library. The operations are on a 128 byte buffer with 10,000 iterations. The results show operations increased from 320,000 to 416,000 operations per second. Finally the third graph shows the results of an internal kernel microbenchmark that uses the Solaris /kernel/crypto/amd64/sha1 module. The operations are on a 64Kbyte buffer with 100 iterations. third graph shows the results of an internal kernel microbenchmark that uses the Solaris /kernel/crypto/amd64/sha1 module. The operations are on a 64Kbyte buffer with 100 iterations. The results show for 1 kernel thread, operations increased from 410 to 600 MBytes/second. For 8 kernel threads, operations increase from 1540 to 1940 MBytes/second. Availability This code is in Solaris 11 FCS. It is available in the 64-bit libmd(3LIB) library for 64-bit programs and is in the Solaris kernel. You must be running hardware that supports Intel's SSSE3 instructions (for example, Intel Nehalem, Westmere, or Sandy Bridge microprocessor architectures). The easiest way to determine if SSSE3 is available is with the isainfo(1) command. For example, nehalem $ isainfo -v $ isainfo -v 64-bit amd64 applications sse4.2 sse4.1 ssse3 popcnt tscp ahf cx16 sse3 sse2 sse fxsr mmx cmov amd_sysc cx8 tsc fpu 32-bit i386 applications sse4.2 sse4.1 ssse3 popcnt tscp ahf cx16 sse3 sse2 sse fxsr mmx cmov sep cx8 tsc fpu If the output also shows "avx", the Solaris executes the even-more optimized 3-operand AVX instructions for SHA-1 mentioned above: sandybridge $ isainfo -v 64-bit amd64 applications avx xsave pclmulqdq aes sse4.2 sse4.1 ssse3 popcnt tscp ahf cx16 sse3 sse2 sse fxsr mmx cmov amd_sysc cx8 tsc fpu 32-bit i386 applications avx xsave pclmulqdq aes sse4.2 sse4.1 ssse3 popcnt tscp ahf cx16 sse3 sse2 sse fxsr mmx cmov sep cx8 tsc fpu No special configuration or setup is needed to take advantage of this code. Solaris libraries and kernel automatically determine if it's running on SSSE3 or AVX-capable machines and execute the correctly-tuned code for that microprocessor. Summary The Solaris 11 Crypto Framework, via the sha1 kernel module and libmd(3LIB) and libpkcs11(3LIB) libraries, incorporated a useful SHA-1 optimization from Intel for SSSE3-capable microprocessors. As with other Solaris optimizations, they come automatically "under the hood" with the current Solaris release. References "Improving the Performance of the Secure Hash Algorithm (SHA-1)" by Max Locktyukhin (Intel, March 2010). The source for these SHA-1 optimizations used in Solaris "SHA-1", Wikipedia Good overview of SHA-1 FIPS 180-1 SHA-1 standard (FIPS, 1995) NIST Comments on Cryptanalytic Attacks on SHA-1 (2005, revised 2006)

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  • CentOS will not boot. Error 13

    - by ipengineer
    I am having trouble with one of our CentOS servers. I migrated this server to XenServer, installed a new xen kernel, and performed a mkinitrd with: mkinitrd --omit-scsi-modules --with=xennet --with=xenblk --preload=xenblk initrd-2.6.18-308.4.1.el5xen-no-scsi.img 2.6.18-308.4.1.el5xen Now I am getting an error 13 on boot. Screenshot: http://postimage.org/image/k7js0l41v/ I can still boot with the PAE kernel. Does anyone have any idea on how to resolve this? My Grub file looks like: default=0 timeout=5 splashimage=(hd0,0)/grub/splash.xpm.gz hiddenmenu title CentOS (2.6.18-308.4.1.el5xen) root (hd0,0) kernel /vmlinuz-2.6.18-308.4.1.el5xen ro root=/dev/hdb1 ramdisk_size=256000 initrd /initrd-2.6.18-308.4.1.el5xen-no-scsi.img title CentOS (2.6.18-308.4.1.el5PAE) root (hd0,0) kernel /vmlinuz-2.6.18-308.4.1.el5PAE ro root=/dev/hdb1 ramdisk_size=256000 initrd /initrd-2.6.18-308.4.1.el5PAE.img title CentOS (2.6.18-274.17.1.el5PAE) root (hd0,0) kernel /vmlinuz-2.6.18-274.17.1.el5PAE ro root=/dev/hdb1 ramdisk_size=256000 initrd /initrd-2.6.18-274.17.1.el5PAE.img

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  • Linux Ubuntu: Updating the GRUB menu

    - by Mr X
    So apparently there are 2 versions of Linux on my laptop(I have a dual boot system with Linux and Windows 8 but Linux is the master OS). One of them uses the Kernel version 3.11.0 whose headers + source code are incompatible with my wireless driver. My laptop is a Toshiba Satellite with a Realtek RTL8188CE wireless lan.So the newer kernel version is still the first option on the menu and to get to Linux I use the "Previous versions of linux" which is running Kernel version 3.2.0-55. What can I do to update the grub menu so that Linux version with the 3.2.0-55 Kernel appears as the primary option? Do I need to get rid of/uninstall the newer kernel version? How can I do this without screwing up Linux entirely?

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  • Inverted schedctl usage in the JVM

    - by Dave
    The schedctl facility in Solaris allows a thread to request that the kernel defer involuntary preemption for a brief period. The mechanism is strictly advisory - the kernel can opt to ignore the request. Schedctl is typically used to bracket lock critical sections. That, in turn, can avoid convoying -- threads piling up on a critical section behind a preempted lock-holder -- and other lock-related performance pathologies. If you're interested see the man pages for schedctl_start() and schedctl_stop() and the schedctl.h include file. The implementation is very efficient. schedctl_start(), which asks that preemption be deferred, simply stores into a thread-specific structure -- the schedctl block -- that the kernel maps into user-space. Similarly, schedctl_stop() clears the flag set by schedctl_stop() and then checks a "preemption pending" flag in the block. Normally, this will be false, but if set schedctl_stop() will yield to politely grant the CPU to other threads. Note that you can't abuse this facility for long-term preemption avoidance as the deferral is brief. If your thread exceeds the grace period the kernel will preempt it and transiently degrade its effective scheduling priority. Further reading : US05937187 and various papers by Andy Tucker. We'll now switch topics to the implementation of the "synchronized" locking construct in the HotSpot JVM. If a lock is contended then on multiprocessor systems we'll spin briefly to try to avoid context switching. Context switching is wasted work and inflicts various cache and TLB penalties on the threads involved. If context switching were "free" then we'd never spin to avoid switching, but that's not the case. We use an adaptive spin-then-park strategy. One potentially undesirable outcome is that we can be preempted while spinning. When our spinning thread is finally rescheduled the lock may or may not be available. If not, we'll spin and then potentially park (block) again, thus suffering a 2nd context switch. Recall that the reason we spin is to avoid context switching. To avoid this scenario I've found it useful to enable schedctl to request deferral while spinning. But while spinning I've arranged for the code to periodically check or poll the "preemption pending" flag. If that's found set we simply abandon our spinning attempt and park immediately. This avoids the double context-switch scenario above. One annoyance is that the schedctl blocks for the threads in a given process are tightly packed on special pages mapped from kernel space into user-land. As such, writes to the schedctl blocks can cause false sharing on other adjacent blocks. Hopefully the kernel folks will make changes to avoid this by padding and aligning the blocks to ensure that one cache line underlies at most one schedctl block at any one time.

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  • What commands are needed to install Ubuntu Core?

    - by Oxwivi
    Ubuntu Core's wiki page page contains the instructions to install Ubuntu Core on a target media: Uncompress (do not unpack) rootfs Format target media: at least one partition should be ext2, ext3, or ext4 Unpack Ubuntu Core to ext{2,3,4} partition Install boot-loader Install Linux If the Linux kernel requires modules, add these to /lib/modules/$(uname -r) in the ext{2,3,4} file system Boot the target device Install any additional required software using apt-get But what are the specific commands to do the above? The things I'm specifically confused about are: Uncompressing and unpacking, what's the difference and how do I do them? What package should I install if I want the generic kernel provided in regular Ubuntu installation? I won't be installing any drivers or anything related to kernel other than what's provided in the repos, do I need to worry about manually adding kernel modules? PS I would like to request that all the commands used in the installation process be mentioned in the answer, for the benefit of ones who're completely unfamiliar and myself, should I ever forget.

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  • Error building main Guest Additions Module while installing VirtualBox guest additions

    - by Praveen Sripati
    I have installed Ubuntu 12.10 Guest on Ubuntu 12.04 Host using VirtualBox. Everything is from repository and no direct install. When I install the guest additions, the below error is shown in the console. Before running the command I mapped the VBoxGuestAdditions.iso in the Guest. The closest I could get is this article which says to install the latest version of VirtualBox (not the one from the repository). Is there any alternate solution? sudo ./VBoxLinuxAdditions.run Verifying archive integrity... All good. Uncompressing VirtualBox 4.1.12 Guest Additions for Linux......... VirtualBox Guest Additions installer Removing installed version 4.1.12 of VirtualBox Guest Additions... Removing existing VirtualBox DKMS kernel modules ...done. Removing existing VirtualBox non-DKMS kernel modules ...done. Building the VirtualBox Guest Additions kernel modules The headers for the current running kernel were not found. If the following module compilation fails then this could be the reason. Building the main Guest Additions module ...fail! (Look at /var/log/vboxadd-install.log to find out what went wrong) Doing non-kernel setup of the Guest Additions ...done. Installing the Window System drivers Warning: unknown version of the X Window System installed. Not installing X Window System drivers. Installing modules ...done. Installing graphics libraries and desktop services components ...done.

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  • Centos 6.3 install reiserFS support

    - by Alon_A
    I'm trying to change an existing ext4 partition to reiserFS in Centos 6.3 64bit. I've updated the kernel to Centos Plus: First, I've updated /etc/yum.repos.d/CentOS-Base.repo: In the [centosplus] section: enabled=1 includepkgs=kernel* Then I ran yum ypdate and my Kernel was updated to Centos Plus: [root@vappsil disk]# uname -r 2.6.32-279.11.1.el6.centos.plus.x86_64 Then, I've added this to /etc/yum.repos.d/CentOS-Base.repo into the [centosplus] section: includepkgs=kernel* jfsutils reiserfs-utils into the [base] and [updates] section: includepkgs=kernel* jfsutils reiserfs-utils But when trying to execute: yum install reiserfs-utils I get: No package reiserfs-utils available. How can I install the reiserFS-utils package to create a reiserFS partition?

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  • My OpenCL kernel is slower on faster hardware.. But why?

    - by matdumsa
    Hi folks, As I was finishing coding my project for a multicore programming class I came up upon something really weird I wanted to discuss with you. We were asked to create any program that would show significant improvement in being programmed for a multi-core platform. I’ve decided to try and code something on the GPU to try out OpenCL. I’ve chosen the matrix convolution problem since I’m quite familiar with it (I’ve parallelized it before with open_mpi with great speedup for large images). So here it is, I select a large GIF file (2.5 MB) [2816X2112] and I run the sequential version (original code) and I get an average of 15.3 seconds. I then run the new OpenCL version I just wrote on my MBP integrated GeForce 9400M and I get timings of 1.26s in average.. So far so good, it’s a speedup of 12X!! But now I go in my energy saver panel to turn on the “Graphic Performance Mode” That mode turns off the GeForce 9400M and turns on the Geforce 9600M GT my system has. Apple says this card is twice as fast as the integrated one. Guess what, my timing using the kick-ass graphic card are 3.2 seconds in average… My 9600M GT seems to be more than two times slower than the 9400M.. For those of you that are OpenCL inclined, I copy all data to remote buffers before starting, so the actual computation doesn’t require roundtrip to main ram. Also, I let OpenCL determine the optimal local-worksize as I’ve read they’ve done a pretty good implementation at figuring that parameter out.. Anyone has a clue? edit: full source code with makefiles here http://www.mathieusavard.info/convolution.zip cd gimage make cd ../clconvolute make put a large input.gif in clconvolute and run it to see results

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  • How do I fix my installation of ATI Catalyst Video Drivers in 12.04 LTS?

    - by Boris
    My graphic card is a Mobility Radeon HD 4200 Series. I tried these 2 answers from What is the correct way to install ATI Catalyst Video Drivers in 12.04 LTS? But unfortunately, it does not work for me: When running the amd script, I get this error message: $ sudo sh ./amd-driver-installer-12-4-x86.x86_64.run ... DKMS part of installation failed. Please refer to /usr/share/ati/fglrx-install.log for details When checking this log file, I get: Uninstalling any previously installed drivers. Creating symlink /var/lib/dkms/fglrx/8.961/source -> /usr/src/fglrx-8.961 DKMS: add completed. Kernel preparation unnecessary for this kernel. Skipping... Building module: cleaning build area.... cd /var/lib/dkms/fglrx/8.961/build; sh make.sh --nohints --uname_r=3.2.0-24-generic-pae --norootcheck......(bad exit status: 1) [Error] Kernel Module : Failed to build fglrx-8.961 with DKMS [Error] Kernel Module : Removing fglrx-8.961 from DKMS Deleting module version: 8.961 completely from the DKMS tree. Done. [Reboot] Kernel Module : update-initramfs When checking with fglrxinfo, I get: $ fglrxinfo X Error of failed request: BadRequest (invalid request code or no such operation) Major opcode of failed request: 138 (ATIFGLEXTENSION) Minor opcode of failed request: 66 () Serial number of failed request: 13 Current serial number in output stream: 13

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  • Log Debug Messages without Debug Serial on Shipped Device

    - by Kate Moss' Open Space
    Debug message is one of the ancient but useful way for problem resolving. Message is redirected to PB if KITL is enabled otherwise it goes to default debug port, usually a serial port on most of the platform but it really depends on how OEMWriteDebugString and OEMWriteDebugByte are implemented. For many reasons, we don't want to have a debug serial port, for example, we don't have enough spare serial ports and it can affect the performance. So some of the BSP designers decide to dump the messages into other media, could be a log file, shared memory or any solution that is suitable for the need. In CE 5.0 and previous, OAL and Kernel are linked into one binaries; in the other word, you can use whatever function in kernel, such as SC_CreateFileW to access filesystem in OAL, even this is strongly not recommended. But since the OAL is being a standalone executable in CE 6.0, we no longer can use this back door but only interface exported in NKGlobal which just provides enough for OAL but no more. Accessing filesystem or using sync object to communicate to other drivers or application is even not an option. Sounds like the kernel lock itself up; of course, OAL is in kernel space, you can still do whatever you want to hack into kernel, but once again, it is not only make it a dirty solution but also fragile. So isn't there an elegant solution? Let's see how a debug message print out. In private\winceos\COREOS\nk\kernel\printf.c, the OutputDebugStringW is the one for pumping out the messages; most of the code is for error handling and serialization but what really interesting is the following code piece     if (g_cInterruptsOff) {         OEMWriteDebugString ((unsigned short *)str);     } else {         g_pNKGlobal->pfnWriteDebugString ((unsigned short *)str);     }     CELOG_OutputDebugString(dwActvProcId, dwCurThId, str); It outputs the message to default debug output (is redirected to KITL when available) or OAL when needed but note that highlight part, it also invokes CELOG_OutputDebugString. Follow the thread to private\winceos\COREOS\nk\logger\CeLogInstrumentation.c, this function dump whatever input to CELOG. So whatever the debug message is we always got a clone in CELOG. General speaking, all of the debug message is logged to CELOG already, so what you need to do is using celogflush.exe with CELZONE_DEBUG zone, and then viewing the data using the by Readlog tool. Here are some information about these tools CELOG - http://msdn.microsoft.com/en-us/library/ee479818.aspx READLOG - http://msdn.microsoft.com/en-us/library/ee481220.aspx Also for advanced reader, I encourage you to dig into private\winceos\COREOS\nk\celog\celogdll, the source of CELOG.DLL and use it as a starting point to create a more lightweight debug message logger for your own device!

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  • Having trouble installing guest additions for a Xubuntu 13.10 guest OS in Virtualbox 4.2.10

    - by Duval Pearson III
    I am using Ubuntu 13.04 64-BIT as my host operating system running Virtual Box 4.2.10. I get this message when I tell virtualbox to install guest additions(CTRL+D),mounting the volume in the guest OS and run the VBoxLinuxAdditions.run file using root by: sudo ./VBoxLinuxAdditions.run It starts and then comes to these error messages: Verifying archive integrity... All good. Uncompressing VirtualBox 4.2.10 Guest Additions for Linux.......... VirtualBox Guest Additions installer Removing existing VirtualBox non-DKMS kernel modules ...done. Building the VirtualBox Guest Additions kernel modules The headers for the current running kernel were not found. If the following module compilation fails then this could be the reason. Building the main Guest Additions module ...done. Building the shared folder support module ...fail! (Look at /var/log/vboxadd-install.log to find out what went wrong) Doing non-kernel setup of the Guest Additions ...done. Installing the Window System drivers Warning: unknown version of the X Window System installed. Not installing X Window System drivers. Installing modules ...done. Installing graphics libraries and desktop services components ...done. allusers@allusers-VirtualBox:/media/allusers/VBOXADDITIONS_4.2.10_84104$ I followed everything from the official VirtualBox manual on installing guest additions for linux I used some other commands such as: sudo apt-get install build-essential linux-headers-$(uname -r) dkms and: sudo apt-get install virtualbox-guest-x11 I rebooted after executing those command and it still wont work. It still says the kernel modules are missing and the window is not seamless. Any idea what could be the problem?

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  • Cannot log into Cinnamon after deleting ~/.config

    - by msoa
    After I removed "./.config" from Home folder, I can not log in to the cinnamon session: failed to load session "cinnamon" What do I do? xsession-error: Xsession: X session started for tux at Fri Oct 26 06:35:58 IRST 2012 localuser:tux being added to access control list Setting IM through im-switch for locale=en_US. Start IM through /etc/X11/xinit/xinput.d/all_ALL linked to /etc/X11/xinit/xinput.d/default. Failed to connect to the VirtualBox kernel service Failed to connect to the VirtualBox kernel service Failed to connect to the VirtualBox kernel service Failed to connect to the VirtualBox kernel service I am runing Cinnamon on a local machine, no on Virtualbox. but virtualbox is installed for some usage. !?

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  • centos how to install systemtap

    - by Mingfei.hua
    I'm really new to sysmtemtap. just want to install and try systemtap on my lab server. My Linux release version is centos 6.3 and kernel version 2.6.32-279.5.2.el6.i686. I followed some doument, do yum install kernel-devel yum install kernel-debuginfo yum install systemtap all completed without error or warning. but when I try to test systemtap by stap -v -e 'probe vfs.read {printf("read performed\n"); exit()}' I got error Pass 1: parsed user script and 83 library script(s) using 25180virt/14088res/2684shr kb, in 120usr/10sys/161real ms. semantic error: missing i386 kernel/module debuginfo under '/lib/modules/2.6.32-279.5.2.el6.i686/build' while resolving probe point kernel.function("vfs_read")

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  • Suspending my laptop breaks ethernet over firewire, are there commands which can fix it?

    - by Josh
    As mentioned in this question I am using a firewire cable to provide a private network between my laptop and my desktop, because it makes using the screen sharing program synergy much nicer than using WIFI. However when I leave my office for the day and I suspend my laptop, when I return the next day, the desktop and the laptop cannot communicate over firewire anymore. The firewire0 device still has an IP address. but when I try and ping the desktop I get no route to host I'm using kernel 2.6.35-24-generic #42-Ubuntu SMP x86_64 on Ubuntu 10.10. Is there some way I can remedy this without a reboot? Like, removing some kernel modules and re-inserting them? Here's what I have tried so far and the results: root@token:~# dmesg|tail -n 1 [592525.204024] firewire_core: phy config: card 0, new root=ffc1, gap_count=5 root@token:~# modprobe -r firewire_net firewire_ohci firewire_core root@token:~# modprobe -v firewire_ohci insmod /lib/modules/2.6.35-24-generic/kernel/lib/crc-itu-t.ko insmod /lib/modules/2.6.35-24-generic/kernel/drivers/firewire/firewire-core.ko insmod /lib/modules/2.6.35-24-generic/kernel/drivers/firewire/firewire-ohci.ko root@token:~# dmesg|tail [592525.204024] firewire_core: phy config: card 0, new root=ffc1, gap_count=5 [592563.410868] firewire_ohci: Removed fw-ohci device. [592579.160086] firewire_ohci: Added fw-ohci device 0000:02:00.0, OHCI v1.10, 4 IR + 8 IT contexts, quirks 0x2 [592579.160137] firewire_ohci: isochronous cycle inconsistent [592579.660294] firewire_core: created device fw0: GUID 0000000000000000, S400 [592579.663805] firewire_core: created device fw1: GUID 0017f2fffe89bce6, S400 [592579.663813] firewire_core: phy config: card 0, new root=ffc1, gap_count=5 [592579.700720] firewire_core: phy config: card 0, new root=ffc1, gap_count=5 [592579.700842] firewire_core: refreshed device fw0 [592579.702603] firewire_net: firewire0: IPv4 over FireWire on device 0000000000000000 root@token:~# ping stan.firewire PING stan.firewire (192.168.100.1) 56(84) bytes of data. From token.local (192.168.100.3) icmp_seq=1 Destination Host Unreachable From token.local (192.168.100.3) icmp_seq=2 Destination Host Unreachable From token.local (192.168.100.3) icmp_seq=3 Destination Host Unreachable I also tried removing the modules prior to suspending, and re-inserting after resuming. This did not work either :-(

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  • How the kernel gives seg. fault for a scenario like this?

    - by bala1486
    I have a doubt in accessing some invalid data. How will the OS cause segmentation fault for a scenario like this? Suppose a date segment has some 100 bytes. This will be mapped and a page table entry will be created. But the page size is 4K. Consider the data segment is aligned with this page boundary. So at first consider accessing a valid data within the 100 bytes. So now the page table entry is in TLB. Next if you try to access some invalid data between the 100 and 4K, the entry is there in page table and will it be allowed to access the invalid data??? Thanks, Bala

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  • Why is my Wacom Intuos tablet not detected?

    - by mjwittering
    I need a little help trying to install a Wacom Intuos tablet, model number CTL-480/S. My installation of Ubuntu 13.04, 64bit, doesn't seem to be able to detect the device. I've tried an few different USB ports on my machine and get the same result. I believe there is an issue because when I open the System Settings app from the launcher and browse to the Wacom Tablet section under hardware, it reports that there is 'No table detected'. When I use lsusb I can see the device is detected: Bus 003 Device 004: ID 056a:030e Wacom Co., Ltd I've also pulled the following from the syslog: Oct 16 16:51:05 earth kernel: [ 7062.388031] usb 3-5: new full-speed USB device number 4 using ohci_hcd Oct 16 16:51:05 earth kernel: [ 7062.611038] usb 3-5: New USB device found, idVendor=056a, idProduct=030e Oct 16 16:51:05 earth kernel: [ 7062.611042] usb 3-5: New USB device strings: Mfr=1, Product=2, SerialNumber=0 Oct 16 16:51:05 earth kernel: [ 7062.611045] usb 3-5: Product: Intuos PS Oct 16 16:51:05 earth kernel: [ 7062.611047] usb 3-5: Manufacturer: Wacom Co.,Ltd. Oct 16 16:51:05 earth mtp-probe: checking bus 3, device 4: "/sys/devices/pci0000:00/0000:00:02.0/usb3/3-5" Oct 16 16:51:05 earth mtp-probe: bus: 3, device: 4 was not an MTP device I'd really appreciate any suggestions to help debug and install this device.

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  • Upgrade to Ubuntu 13.10 in a VirtualBox: Gnome desktop not working

    - by Xavier
    I had Ubuntu 13.04 running in a VirtualBox (the host is WinXP). I've upgraded it to 13.10 but I've some issues: Gnome desktop is not working correctly (I can log in but the main menu bar remains empty - I can only log out with CTRL-ALT-BACKSPACE) I cannot build and install the VirtualBox Guest Addons: When trying to build it, it says: me@virtuntu:/etc/init.d$ sudo ./vboxadd setup Removing existing VirtualBox DKMS kernel modules ...done. Removing existing VirtualBox non-DKMS kernel modules ...done. Building the VirtualBox Guest Additions kernel modules The headers for the current running kernel were not found. If the following module compilation fails then this could be the reason. Building the main Guest Additions module ...done. Building the shared folder support module ...fail! (Look at /var/log/vboxadd-install.log to find out what went wrong) Doing non-kernel setup of the Guest Additions ...done. In the log file, I see the following error: /tmp/vbox.0/dirops.c:292:5: error: unknown field ‘readdir’ specified in initializer .readdir = sf_dir_read, ^ /tmp/vbox.0/dirops.c:292:5: warning: initialization from incompatible pointer type [enabled by default] /tmp/vbox.0/dirops.c:292:5: warning: (near initialization for ‘sf_dir_fops.flush’) [enabled by default] make[2]: *** [/tmp/vbox.0/dirops.o] Erreur 1 make[1]: *** [_module_/tmp/vbox.0] Erreur 2 make: *** [vboxsf] Erreur 2 Creating user for the Guest Additions. Anyone had a similar experience? Any clue to help me? Thanks a lot!

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  • Can't get Wireless RT2x00usb driver to work, and can't blacklist it

    - by TheLQ
    After a two year hiatus to Linux, I try it again out again. And then I run into to driver issues... I have an old Linksys WUSB54G v4 Wireless USB Adapter. In previous versions I had to use a combination of Ndiswrapper and Wicd to hope of getting it working. In 10.10, apparently there are built in drivers for it. Unfortunately they don't work. Fails to connect to my WPA network, fails to connect to my open unencrypted network. Wicd fails at "Obtaining IP address" or when using static IPs fails at verifying connectivity to network. Getting fed up I tried the ndiswrapper approach. Installed and configured, but still not working, even when blacklisting the rt2570 module. So for some debugging I added some lines to my /etc/modprobe.d/blacklist.conf file blacklist rt2570 blacklist prism54usb blacklist rt2x00lib blacklist rt2x00usb Restart and find this: lordquackstar@quackbeast:/etc/modprobe.d$ lsmod | grep rt2 rt2500usb 18049 0 rt2x00usb 9779 1 rt2500usb rt2x00lib 27275 2 rt2500usb,rt2x00usb led_class 2633 1 rt2x00lib mac80211 231541 2 rt2x00usb,rt2x00lib cfg80211 144470 2 rt2x00lib,mac80211 Seems to be ignored... Tried this: lordquackstar@quackbeast:/etc/modprobe.d$ sudo rmmod -f rt2x00usb ERROR: Removing 'rt2x00usb': Resource temporarily unavailable lordquackstar@quackbeast:/etc/modprobe.d$ sudo rmmod -f rt2x00lib ERROR: Removing 'rt2x00lib': Resource temporarily unavailable and couldn't connect. Restarted and was back to the same modules loading. Maybe there's something in the log: lordquackstar@quackbeast:/etc/modprobe.d$ tail -n100000 /var/log/syslog | grep rt2 Dec 13 19:01:15 quackbeast kernel: [ 23.698056] Registered led device: rt2500usb-phy0::radio Dec 13 19:01:15 quackbeast kernel: [ 23.698140] Registered led device: rt2500usb-phy0::quality Dec 13 19:01:15 quackbeast kernel: [ 23.701680] usbcore: registered new interface driver rt2500usb Dec 13 19:01:15 quackbeast NetworkManager[855]: <info> (wlan0): new 802.11 WiFi device (driver: 'rt2500usb' ifindex: 4) Dec 13 19:17:47 quackbeast kernel: [ 23.521759] Registered led device: rt2500usb-phy0::radio Dec 13 19:17:47 quackbeast kernel: [ 23.521824] Registered led device: rt2500usb-phy0::quality Dec 13 19:17:47 quackbeast kernel: [ 23.524740] usbcore: registered new interface driver rt2500usb Dec 13 19:17:47 quackbeast NetworkManager[798]: <info> (wlan0): new 802.11 WiFi device (driver: 'rt2500usb' ifindex: 4) Seems to be autoloading. So this means that even if I pull it out, remove the module, and get it working, it still won't work when its plugged in all the time. More info: lordquackstar@quackbeast:/etc/modprobe.d$ sudo lshw -C Network *SNIP* *-network description: Wireless interface physical id: 1 bus info: usb@1:2 logical name: wlan0 serial: 00:12:17:9b:f3:1e capabilities: ethernet physical wireless configuration: broadcast=yes driver=rt2500usb driverversion=2.6.35-24-generic firmware=N/A link=no multicast=yes wireless=IEEE 802.11bg USB: lordquackstar@quackbeast:/etc/modprobe.d$ lsusb | grep -i rt Bus 001 Device 003: ID 13b1:000d Linksys WUSB54G v4 802.11g Adapter [Ralink RT2500USB] Any suggestions on how to either fix the rt2x00usb driver or permanently block it from loading? Note that I already have ndiswrapper installed

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