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  • ssh script gives "key_read" error

    - by lugte098
    I'm using a script that connects to a cluster through ssh and sends some commands, then quits the connection. This script basically connects once using ssh, then executes a script in this session. This script loops through a list of commands a few times and after it is finished, the connection is terminated. So this script works fine, except for the fact that after a few loops it gives me the following error at loop 22. And then again at loop 32. The loops do exactly the same thing, so i cannot grasp the problem the script is facing. This is the error: key_read: uudecode AAAAB3NzaC1yc2EAAAABIwAAAQEAxmNx2hcXLpTjuaa3yKC3B9gbF7KprP2/ CH8fBgMbCyIcOB+ZMQDmEnbVTqedBwV/mxjZzorEpHTM8MX2WsTjFsxwzDgcpuxm+3cwfb0WSy9Y4Kb F8crAsRDbBIpUZ2n/iSdRcds9nTjk6PA61kTS24RLACHpqF18vudlO5WcbCOnAwa+DdUs0Raw29UiQc BaC6M4YPnApq9Ayy7a6qFI2uK6efkwfLTZIDivWlIdLpRLEyuBEpozQQhEd0mrGhR/ Gl1GevRvFMms14130xQ4A5UpJSn6CmrRIWBkcgp1TilqDGQ1F5xZOinnc4C00gFrbT3hkkQqY5A9p node023,10.141.0.31 ssh-rsa AAAAB3NzaC1yc2EAAAABIwAAAQEAxmNx2hcXLpTjuaa3yKC3 B9gbF7KprP2/CH8fBgMbCyIcOB+ZMQDmEnbVTqedBwV/mxjZzorEpHTM8MX2WsTjFsxwzDgcpuxm+ 3cwfb0WSy9Y4KbF8crAsRDbBIpUZ2n/iSdRcds9nTjk6PA61kTS24RLACHpqF18vudlO5WcbCOnAw a+DdUs0Raw29UiQcBaC6M4YPnApq9Ayy7a6qFI2uK6efkwfLTZIDivWlIdLpRLEyuBEpozQQhEd0m rGhR/Gl1GevRvFMms14130xQ4A5UpJSn6CmrRIWBkcgp1TilqDGQ1F5xZOinnc4C00gFrbT3hkkQqY5 A9pa0lQHFkSw==

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  • Is AMQP suitable as both an intra and inter-machine software bus?

    - by Bwooce
    I'm trying to get my head around AMQP. It looks great for inter-machine (cluster, LAN, WAN) communication between applications but I'm not sure if it is suitable (in architectural, and current implementation terms) for use as a software bus within one machine. Would it be worth pulling out a current high performance message passing framework to replace it with AMQP, or is this falling into the same trap as RPC by blurring the distinction between local and non-local communication? I'm also wary of the performance impacts of using a WAN technology for intra-machine communications, although this may be more of an implementation concern than architecture. War stories would be appreciated.

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  • SQL Server 2008 BULK INSERT causes more reads than writes. Why?

    - by sh1ng
    I've huge a table (a few billion rows) with a clustered index and two non-clustered indices. A BULK INSERT operation produces 112000 reads and only 383 writes (duration 19948ms). It's very confusing to me. Why do reads exceed writes? How can I reduce it? update query insert bulk DenormalizedPrice4 ([DP_ID] BigInt, [DP_CountryID] Int, [DP_OperatorID] SmallInt, [DP_OperatorPriceID] BigInt, [DP_SpoID] Int, [DP_TourTypeID] Int, [DP_CheckinDate] Date, [DP_CurrencyID] SmallInt, [DP_Cost] Decimal(9,2), [DP_FirstCityID] Int, [DP_FirstHotelID] Int, [DP_FirstBuildingID] Int, [DP_FirstHotelGlobalStarID] Int, [DP_FirstHotelGlobalMealID] Int, [DP_FirstHotelAccommodationTypeID] Int, [DP_FirstHotelRoomCategoryID] Int, [DP_FirstHotelRoomTypeID] Int, [DP_Days] TinyInt, [DP_Nights] TinyInt, [DP_ChildrenCount] TinyInt, [DP_AdultsCount] TinyInt, [DP_TariffID] Int, [DP_DepartureCityID] Int, [DP_DateCreated] SmallDateTime, [DP_DateDenormalized] SmallDateTime, [DP_IsHide] Bit, [DP_FirstHotelAccommodationID] Int) with (CHECK_CONSTRAINTS) No triggers & foreign keys Cluster Index by DP_ID and two non-unique indexes(with fillfactor=90%) And one more thing DB stored on RAID50 with stripe size 256K

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  • EJB3.1 Remote invocation - is it distributed automatically? is it expensive?

    - by Hank
    I'm building a JEE6 application with performance and scalability in the forefront of my mind. Business logic and JPA2-facade is held in stateless session beans (EJB3.1). As of right now, the SLSBs implement only @Remote-interfaces. When a bean needs to access another bean, it does so via RMI. My reasoning behind this is the assumption that, once the application runs on a bunch of clustered application servers, the RMI-part allows the execution to be distributed across the whole cluster automagically. Is that a correct assumption? I'm fine with dealing with the downsides of that (objects lose entityManager session, pass-by-value), at least I think so. But I am wondering if constant remote invocation isn't adding more load then necessary.

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  • Orbital equations, and power required to run them

    - by Adam Davis
    Due to a discussion on the SO IRC today, I'm curious about orbital mechanics, and The equations needed to solve orbital problems The computing power required to solve complex problems The question in particular is calculating when the Earth will plow into the Sun (or vice versa, depending on the frame of reference). I suspect that all the gravitational pulls within our solar system may need to be calculated, which makes me wonder what type of computer cluster is required, or can this be done on a single box? I don't have the experience to do a back of the napkin test here, but perhaps you do? Also, much thx to Gortok for the original inspiration (see comments).

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  • Genetic programming in c++, library suggestions?

    - by shuttle87
    I'm looking to add some genetic algorithms to an Operations research project I have been involved in. Currently we have a program that aids in optimizing some scheduling and we want to add in some heuristics in the form of genetic algorithms. Are there any good libraries for generic genetic programming/algorithms in c++? Or would you recommend I just code my own? I should add that while I am not new to c++ I am fairly new to doing this sort of mathematical optimization work in c++ as the group I worked with previously had tended to use a proprietary optimization package. We have a fitness function that is fairly computationally intensive to evaluate and we have a cluster to run this on so parallelized code is highly desirable. So is c++ a good language for this? If not please recommend some other ones as I am willing to learn another language if it makes life easier. thanks!

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  • Illegal instruction gcc assembler.

    - by Bernt
    In assembler: .globl _test _test: pushl %ebp movl %esp, %ebp movl $0, %eax pushl %eax popl %ebp ret Calling from c main() { _test(); } Compile: gcc -m32 -o test test.c test.s This code gives me illegal instruction sometimes and segment fault other times. In gdc i always get illegal instruction, this is just a simple test, i had a larger program that was working and suddenly after no apperant reason stopped working, now i always get this error even if i start from scratch like above. I have narrowed it down to pushl %eax (or any other register....), if i comment out that line the code runs fine. Any ideas? (I'm running the program at my universities linux cluster, so I have not changed any settings..)

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  • Separation of static and dynamic content in Java EE applications

    - by Dan
    We work with IBM products and we typically use IBM Http Servers (read Apache) as a reverse proxy for our application servers. For performance reasons we serve static content (.gif, .jpg, .css, .html etc.) from our http servers, to ease the burden a bit from the application server. So far, we have to distribute files to http server and configure it manually (writing custom scripts at best.) The problem is the effort needed to keep everything in synch, especially when you need to update the app. Does any Java EE product support this “out of the box”? Is there a way to have application server do this automatically, like in cluster configuration for example, where master node is in charge of distributing the application to other nodes and for keeping everything in synch.

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  • Cassandra performance slow down with counter column

    - by tubcvt
    I have a cluster (4 node ) and a node have 16 core and 24 gb ram: 192.168.23.114 datacenter1 rack1 Up Normal 44.48 GB 25.00% 192.168.23.115 datacenter1 rack1 Up Normal 44.51 GB 25.00% 192.168.23.116 datacenter1 rack1 Up Normal 44.51 GB 25.00% 192.168.23.117 datacenter1 rack1 Up Normal 44.51 GB 25.00% We use about 10 column family (counter column) to make some system statistic report. Problem on here is that When i set replication_factor of this keyspace from 1 to 2 (contain 10 counter column family ), all cpu of node increase from 10% ( when use replication factor=1) to --- 90%. :( :( who can help me work around that :( . why counter column consume too much cpu time :(. thanks all

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  • How to tell process id within Python

    - by R S
    Hey, I am working with a cluster system over linux (www.mosix.org) that allows me to run jobs and have the system run them on different computers. Jobs are run like so: mosrun ls & This will naturally create the process and run it on the background, returning the process id, like so: [1] 29199 Later it will return. I am writing a Python infrastructure that would run jobs and control them. For that I want to run jobs using the mosrun program as above, and save the process ID of the spawned process (29199 in this case). This naturally cannot be done using os.system or commands.getoutput, as the printed ID is not what the process prints to output... Any clues? Edit: Since the python script is only meant to initially run the script, the scripts need to run longer than the python shell. I guess it means the mosrun process cannot be the script's "son process". Any suggestions? Thanks

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  • Should I go with Varnish instead of nginx?

    - by gotts
    I really like nginx. But recently I've found that varnish gives you an opportunity to implement smart caching revers proxy layer(with URL purging). I have a cluster of mongrels which are pretty resource-intensive so if this caching layer can remove some load from mongrels this can be a great thing. I didn't find a way to implement the caching layer(with for application pages; static content is cacheable of course) same with nginx.. Should I use Varnish instead? What would you recommend?

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  • What are some good ways to do intermachine locking?

    - by mike
    Our server cluster consists of 20 machines, each with 10 pids of 5 threads. We'd like some way to prevent any two threads, in any pid, on any machine, from modifying the same object at the same time. Our code's written in Python and runs on Linux, if that helps narrow things down. Also, it's a pretty rare case that two such threads want to do this, so we'd prefer something that optimizes the "only one thread needs this object" case to be really fast, even if it means that the "one thread has locked this object and another one needs it" case isn't great. What are some of the best practices?

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  • Algorithm for redirecting the traffic

    - by TechGeeky
    I was going through the interview questions and found out the below question which I am not able to answer it. Can anyone provide some sort of algorithm for this problem how can I solve it? There are a cluster of stateless servers all serving the same pages. The servers are hosting 5 web pages- p1.html, p2.html, p3.html, p4.html and p5.html p1.html just redirects users to the other 4 pages Requests to p1.html should result in 10% of users being redirected to p2.html, 5% of users redirected to p3.html, 20% of users redirected to p4.html, and 65% of users redirected to p5.html. Users do not need to stick to the page they are first redirected to. They could end up on a different page with every request to p1.html Write a function/pseudocode that would be invoked with every request to p1.html and redirect the correct percentage of users to the correct page. Any suggestions will be of great help.

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  • tomcat session replication without multicast

    - by Andreas Petersson
    i am planning to use 2 dedicated root servers rented at a hosting provider. those machines will run tomcat 6 in a cluster. if i will add additional machines later on - it is unlikely that they will be accessible with multicast, because they will be located in different subnets. is it possible to run tomcat without multicast? all tutorials for tomcat 6 clustering include multicast heartbeat. are there any alternatives to SimpleTcpCluster? or are other alternatives more appropriate in this situation?

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  • Tool for response time analysis on JBoss server?

    - by Ariel Vardi
    I am running a pretty high traffic cluster of JBoss servers serving REST requests and I am interested in tools reading the access logs in Tomcat format (with %D parameter) to provide a detailed analysis of the response time on a per-call basis. Ideally this tool would generate a chart showing the progression of the response time throughout the day, hour per hour, then a weekly view with averages on the day, and monthly with average on the weeks (CACTI style). I've looked for such tools and couldn't find anything. Is any of you guys aware of something close to that before I start writing my own? I haven't looked into CACTI extensions yet, but that be an option?

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  • Can't find netbooted for Kerrighed pxe boot with Ubuntu Lucid Server

    - by Pengin
    I'm following installtion guides for pxe booting and kerrighed. I can't find the package nfsbooted for Ubuntu 10.04. Where did it go? Context: At work I have access to 8 mini-ITX PCs and am trying to build a cluster. My plans include trying Condor, GridGain, Hadoop, and recently Kerrighed has caught my eye. (I reaslise these are all for different kinds of things, I'm just evaluating). Ideally, I'd like to have all the nodes network boot from a single server, since that seems so much easier to manage, plus I can 'borrow' additional PCs for a while without touching their HD. I've been getting on great with Ubuntu Lucid Server (10.04), trying to follow the only guides I can find to get pxe booting (and ultimately kerrighed) to work. This guide is for Ubuntu 8.04 and this one is for Debian. They both refer to a package I can't seem to find, nfsbooted. Has this package been replaced? Am I doing something daft?

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  • k-means clustering in R on very large, sparse matrix?

    - by movingabout
    Hello, I am trying to do some k-means clustering on a very large matrix. The matrix is approximately 500000 rows x 4000 cols yet very sparse (only a couple of "1" values per row). The whole thing does not fit into memory, so I converted it into a sparse ARFF file. But R obviously can't read the sparse ARFF file format. I also have the data as a plain CSV file. Is there any package available in R for loading such sparse matrices efficiently? I'd then use the regular k-means algorithm from the cluster package to proceed. Many thanks

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  • identify documents from results of mahout clustering

    - by Tejas
    I am using mahout to cluster text documents indexed using solr. I have used the "text" field in the document to form vectors. Then I used the k-means driver in mahout for clustering and then the clusterdumper utility to dump the results. I am having difficulty in understanding the output results from the dumper. I could see the clusters formed with term vectors in those clusters. But how do I extract the documents from these clusters. I want the result to be the input documents appearing in different clusters.

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  • MySQL with Java: Open connection only if possible

    - by emempe
    I'm running a database-heavy Java application on a cluster, using Connector/J 5.1.14. Therefore, I have up to 150 concurrent tasks accessing the same MySQL database. I get the following error: Exception in thread "main" com.mysql.jdbc.exceptions.jdbc4.MySQLNonTransientConnectionException: Too many connections This happens because the server can't handle so many connections. I can't change anything on the database server. So my question is: Can I check if a connection is possible BEFORE I actually connect to the database? Something like this (pseudo code): check database for open connection slots if (slot is free) { Connection cn = DriverManager.getConnection(url, username, password); } else { wait ... } Cheers

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  • FlockDB - What is it? And best cases for it uses.

    - by Guru
    Just came across FlockDB graph database. Details at github /flockDB. Twitter claims it uses FlockDB for the following: Twitter runs FlockDB on a large cluster of machines. we use it to store social graphs (who follows whom, who blocks whom) and secondary indices at twitter. At first glance, setup and trying it doesn't look straight forward. Have anyone already used it / setup this? If so, please answer the following general queries. What kind of applications is it better suited for? (Twitter claims it is simple and very rough, it remains to see what it meant though) How is FlockDB better than other graph db / noSQL db. Have you setup FlockDB, used it for a application? Early advices any? Note: I am evaluating the FlockDB and other graph databases mainly for learning them. Perhaps, I will build an application for that.

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  • J2EE/EJB + service locator: is it safe to cache EJB Home lookup result ?

    - by Guillaume
    In a J2EE application, we are using EJB2 in weblogic. To avoid losing time building the initial context and looking up EJB Home interface, I'm considering the Service Locator Pattern. But after a few search on the web I found that event if this pattern is often recommended for the InitialContext caching, there are some negative opinion about the EJB Home caching. Questions: Is it safe to cache EJB Home lookup result ? What will happen if one my cluster node is no more working ? What will happen if I install a new version of the EJB without refreshing the service locator's cache ?

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  • how to optimize sql server table for faster response?

    - by Thomas
    i found a in a table there are 50 thousands records and it takes one minute when we fetch data from sql server table just by issuing a sql. there are one primary key that means a already a cluster index is there. i just do not understand why it takes one minute. beside index what are the ways out there to optimize a table to get the data faster. in this situation what i need to do for faster response. also tell me how we can write always a optimize sql. please tell me all the steps in detail for optimization. thanks.

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  • Horizontal Scaling of Tomcat in Microsoft Azure

    - by Fabe
    Hey everyone, I am working on this quiet a while, but still no conclustion. I want to do horizontal scaling of Tomcat instances in Microsoft Azure (1,2,3,... Tomcat instances for one service). I read lots of articles about session replication, clustering,... with Tomcat. Since Azure does not support Multicasts, there is no easy way to cluster Tomcat. Also sticky sessions is no options, because Azure does round robin load balancing. Setting up two services - one with Terracotta or Apache mod_jk - and the other with Tomcat instances seems overkill for me (if even doable)... Is this even possible? Thanks in advance for reading and answering my question. Every comment/idea is highly appreciated.

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  • Help regarding no sql databases like hadoop, hbase etc

    - by user560370
    I am new to the distributed NoSQL databases like Hadoop, Cassandra, etc. I have few questions for which I seek an expert advice: Can you list problems/challenges one will generally face when making a shift from the present conventional database like MySQL to these large cluster-based databases? What are the difficulties, if any, when one needs to adapt to a newer version of these open source projects? Can you list out the things which are generally stored/kept in memcached for fast rendering of the page? How can I understand the source code of open-source projects so that I can build on it and maybe give back to the community? Above questions may sound to be idiotic and basic but please it's a request for the experts to answer the above questions in detailed and to best of their abilities.

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  • kmeans based on mapreduce by python

    - by user3616059
    I am going to write a mapper and reducer for the kmeans algorithm, I think the best course of action to do is putting the distance calculator in mapper and sending to reducer with the cluster id as key and coordinates of row as value. In reducer, updating the centroids would be performed. I am writing this by python. As you know, I have to use Hadoop streaming to transfer data between STDIN and STOUT. according to my knowledge, when we print (key + "\t"+value), it will be sent to reducer. Reducer will receive data and it calculates the new centroids but when we print new centroids, I think it does not send them to mapper to calculate new clusters and it just send it to STDOUT and as you know, kmeans is a iterative program. So, my questions is whether Hadoop streaming suffers of doing iterative programs and we should employ MRJOB for iterative programs?

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