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  • How to stringfy a swig matrix object in python

    - by leo
    Hi, I am using swig wrapper of openbabel(written in C++, and supply a python wrapper through swig) Below i just use it to read a molecule structure file and get the unitcell property of it. import pybel for molecule in pybel.readfile('pdb','./test.pdb'): unitcell = molecule.unitcell print unitcell |.. |.. The unitcell has function CellMatrix(), unitcell.GetCellMatrix() <22 the OpenBabel::matrix3x3 is something like : 1 2 3 4 5 6 7 8 9 i am wondering how to print out the contents of the matrix3*3 . I have tried str and repr with it. Any general way to stringfy the contents of a matrix wrapped by swing in python ? thanks

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  • Python web server

    - by Ben
    Hi I'd like to get suggestions on the best way to serve python scripts up as web pages. Typically I'd like a way for me and my colleagues to write simple web pages with minimal effort ie we focus on the business logic eg creating simple forms etc. Possibly with some way to manage sessions but this is a nice-to-have. It doesn't have to be WYSIWYG as they are developers but we are busy and don't want to spend long turning an idea into reality. It's for internal use so appearances are not paramount. The software required to enable this should be easy to setup and configure. eg adding new directories and python lib dirs should be easy. My first instinct is apache or tomcat with mod_python. Any comments / suggestions welcome. Thanks in advance.

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  • Injecting raw TCP packets with Python

    - by Evgeniy Arbatov
    Hello! What would be a suitable way to inject a raw TCP packet with Python? For example, I have the payload consisting of hexadecimal numbers and I want to send that sequence of hexadecimal numbers to a network daemon: so that if I choose to send 'abcdef', I see 'abcdef' on the wire too. But not '6162636566' as in the case of: new = socket.socket(socket.AF_INET, socket.SOCK_STREAM) new.connect(('127.0.0.1', 9999)) new.send('abcdef') Can I use Python's SOCK_RAW for this purpose? If so, can you give me an example of sending raw TCP packets with SOCK_RAW (since I did not get it working myself) Thanks! Evgeniy

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  • Installing Django/Python on IIS6

    - by Sohrab Hejazi
    We are currently installing the latest version of Django and Python on IIS6. We have followed the instructions on the following site: http://code.djangoproject.com/wiki/DjangoOnWindowsWithIISAndSQLServer We are receiving a 403 error when trying to access our Django application via the IIS server. We have verified the python installation on IIS6 and it is working properly. We have also verified the Django installation. Our application runs fine under the built-in Django server, but we are having difficulties getting it to run under IIS. We presume we could be getting errors from "Linking Django to PyISAPIe" section of the instructions provided on the link above. Thanks.

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  • Displaying webcam feed using opencv and python

    - by Mitch
    Hi ive been trying to create a simple program with python which utilises opencv to get a video feed from my webcam and display it on the screen. I know im partly there because the window is created and the light on my webcam flicks on, but it just doesnt seem to show anything in the window. hopefully someone can explain what im doing wrong. import cv cv.NamedWindow("w1", cv.CV_WINDOW_AUTOSIZE) capture = cv.CaptureFromCAM(0) def repeat(): frame = cv.QueryFrame(capture) cv.ShowImage("w1", frame) while True: repeat() on an unrelated note, i have noticed that my webcam sometimes changes its index number in cv.CaptureFromCAM and sometimes i need to put in 0, 1 or 2 even though i only have one camera connected and i havnt unplugged it (i know because the light doesnt come on unless i change the index). is there a way to get python to determine the correct index? thanks Mitch

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  • Python: unix socket -> broken pipe

    - by Heinrich Schmetterling
    I'm trying to get Python socket working as an alternative to calling the command line socat. This socat command works fine: echo 'cmd' | sudo socat stdio <path-to-socket> but when I run this python code, I get an error: >>> import socket >>> s = socket.socket(socket.AF_UNIX, socket.SOCK_STREAM) >>> s.connect(<path-to-socket>) >>> s.send('cmd') Traceback (most recent call last): File "<stdin>", line 1, in <module> socket.error: (32, 'Broken pipe') Any ideas what the issue is? Thanks.

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  • Python/X11: find out if user switches virtual desktops

    - by Philip
    Hello everyone, I'm looking for a way to determine if the user switches virtual desktops under X11. I'm using Python with X11 libraries and PyGTK. I found some working examples in C, but I lack the expertise to translate them into Python, and I read the source code of several X11 pager applications (fbpanel, pypanel), but I can't seem to find what I'm looking for. Do I have to register for a signal? Using X11 or GTK? Do I have to busy-wait? I'm completely new to both X11 and GTK, so any hints/help would be greatly appreciated. Greets, Philip PS: My current efforts can be found here.

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  • Why does python use 'magic methods'?

    - by Greg Beech
    I've been playing around with Python recently, and one thing I'm finding a bit odd is the extensive use of 'magic methods', e.g. to make its length available an object implements a method def __len__(self) and then it is called when you write len(obj). I was just wondering why objects don't simply define a len(self) method and have it called directly as a member of the object, e.g. obj.len()? I'm sure there must be good reasons for Python doing it the way it does, but as a newbie I haven't worked out what they are yet.

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  • "from _json import..." - python

    - by RoseOfJericho
    Hello, all. I am inspecting the JSON module of python 3.1, and am currently in /Lib/json/scanner.py. At the top of the file is the following line: from _json import make_scanner as c_make_scanner There are five .py files in the module's directory: __init__ (two leading and trailing underscores, it's formatting as bold), decoder, encoder, scanner and tool. There is no file called "json". My question is: when doing the import, where exactly is "make_scanner" coming from? Yes, I am very new to Python!

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  • Bounced email on Google App Engine

    - by Ivan Vovnenko
    I'm developing application for google app engine (python), witch needs not only to send emails, but also know which ones bounce back. I created special account for my domain [email protected], added it as an app admin and sending messages from it. The problem is (and it was described here http://code.google.com/p/googleappengine/issues/detail?id=1800) - GAE sets the Return-Path to some internal email address, not allowing to receive bounced email messages. Anyone aware of any possible workaround for this? Thanks.

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  • Programmatically generate video or animated GIF in Python?

    - by FogleBird
    I have a series of images that I want to create a video from. Ideally I could specify a frame duration for each frame but a fixed frame rate would be fine too. I'm doing this in wxPython, so I can render to a wxDC or I can save the images to files, like PNG. Is there a Python library that will allow me to create either a video (AVI, MPG, etc) or an animated GIF from these frames? Edit: I've already tried PIL and it doesn't seem to work. Can someone correct me with this conclusion or suggest another toolkit? This link seems to backup my conclusion regarding PIL: http://www.somethinkodd.com/oddthinking/2005/12/06/python-imaging-library-pil-and-animated-gifs/

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  • Prevent python from printing newline

    - by wrongusername
    I have this code in Python inputted = input("Enter in something: ") print("Input is {0}, including the return".format(inputted)) that outputs Enter in something: something Input is something , including the newline I am not sure what is happening; if I use variables that don't depend on user input, I do not get the newline after formatting with the variable. I suspect Python might be taking in the newline as input when I hit return. How can I make it so that the input does not include any newlines so that I may compare it to other strings/characters? (e.g. something == 'a')

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  • Does python have one way of doing things?

    - by gath
    I have always seen in python articles/books that python is simple and it has only one way of doing things. I would like someone to explain to me this concept keeping in mind the example below, if i wanted to get the min and max values of sequence i would do the following; seq=[1,2,3,4,5,6] min(seq) #1 max(seq) #6 but i can also do this; seq[:1] #1 seq[-1] #6 surely this are two ways of doing one simple thing. This confuses me a bit. Gath

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  • Python lazy property decorator

    - by detly
    Recently I've gone through an existing code base and refactored a lot of instance attributes to be lazy, ie. not be initialised in the constructor but only upon first read. These attributes do not change over the lifetime of the instance, but they're a real bottleneck to calculate that first time and only really accessed for special cases. I find myself typing the following snippet of code over and over again for various attributes across various classes: class testA(object): def __init__(self): self._a = None self._b = None @property def a(self): if self._a is None: # Calculate the attribute now self._a = 7 return self._a @property def b(self): #etc Is there an existing decorator to do this already in Python that I'm simply unaware of? Or, is there a reasonably simple way to define a decorator that does this? I'm working under Python 2.5, but 2.6 answers might still be interesting if they are significantly different.

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  • Calculating a range of an exact number of values in Python

    - by Einar
    Hello, I'm building a range between two numbers (floats) and I'd like this range to be of an exact fixed length (no more, no less). range and arange work with steps, instead. To put things into pseudo Python, this is what I'd like to achieve: start_value = -7.5 end_value = 0.1 my_range = my_range_function(star_value, end_value, length=6) print my_range [-7.50,-5.98,-4.46,-2.94,-1.42,0.10] This is essentially equivalent to the R function seq which can specify a sequence of a given length. Is this possible in Python? Thanks.

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  • Problem with stackless python, cannot write to a dict

    - by ANON
    I have simple map-reduce type algorithm, which I want to implement in python and make use of multiple cores. I read somewhere that threads using native thread module in 2.6 dont make use of multiple cores. is that true? I even implemented it using stackless python however i am getting into weird errors [Update: a quick search showed that the stack less does not allows multiple cores So are their any other alternatives?] def Propagate(start,end): print "running Thread with range: ",start,end def maxVote(nLabels): count = {} maxList = [] maxCount = 0 for nLabel in nLabels: if nLabel in count: count[nLabel] += 1 else: count[nLabel] = 1 #Check if the count is max if count[nLabel] > maxCount: maxCount = count[nLabel]; maxList = [nLabel,] elif count[nLabel]==maxCount: maxList.append(nLabel) return random.choice(maxList) for num in range(start,end): node=MapList[num] nLabels = [Label[k] for k in Adj[node]] if (nLabels!=[]): Label[node] = maxVote(nLabels) else: Label[node]=node However in above code the values assigned to Label, that is the change in dictionary are lost. Above propagate function is used as callable for MicroThreads (i.e. TaskLets)

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  • asn.1 parser in C/Python

    - by elventear
    I am looking for a solution to parse asn.1 spec files and generate a decoder from those. Ideally I would like to work with Python modules, but if nothing is available I would use C/C++ libraries and interface them with Python with the plethora of solutions out there. In the past I have been using pyasn1 and building everything by hand but that has become too unwieldly. I have also looked superficially to libtasn1 and asn1c. The first one had problems parsing even the simplest of files. The second has a good parser but generating C code for decoding seems too complex; the solution worked well with straightforward specs but choked on complex ones. Any other good alternatives I may have overlooked?

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  • telnetlib python example

    - by de1337ed
    So I'm trying this really simple example given by the python docs: import getpass import sys import telnetlib HOST = "<HOST_IP>" user = raw_input("Enter your remote account: ") password = getpass.getpass() tn = telnetlib.Telnet(HOST) tn.read_until("login: ") tn.write(user + "\n") if password: tn.read_until("Password: ") tn.write(password + "\n") tn.write("ls\n") tn.write("exit\n") print tn.read_all() My issue is that it hangs at the end of the read_all()... It doesn't print anything out. I've never used this module before so I'm trying to get this really basic example to work before continuing. BTW, I'm using python 2.4 Thank you.

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  • Why the good append syntax is so ugly, asks python newbie

    - by Cawas
    Now following my series of "python newbie questions" and based on another question. Go to http://python.net/~goodger/projects/pycon/2007/idiomatic/handout.html#other-languages-have-variables and scroll down to "Default Parameter Values". There you can find the following: def bad_append(new_item, a_list=[]): a_list.append(new_item) return a_list def good_append(new_item, a_list=None): if a_list is None: a_list = [] a_list.append(new_item) return a_list So, question here is: why is the "good" syntax over a known issue ugly like that in a programming language that promotes "elegant syntax" and "easy-to-use"? Why not just something in the definition itself, that the "argument" name is attached to a "localized" mutable object like: def better_append(new_item, a_list=[].local): a_list.append(new_item) return a_list I'm sure there would be a better way to do this syntax, but I'm also almost positive there's a good reason to why it hasn't been done. So, anyone happens to know why?

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  • Python proxy an application

    - by sharvey
    Does anyone know of a library that enables you to run an application inside some kind of sandbox, with virtual mouse and keyboard support. The use case would be to create some kind of visual test runner, that would replay all actions taken during recording and play them back. So far I found autopy, but the fact that it controls the real mouse position is problematic, because it prevents user interaction with other tools (debugger or anything) while running. Cross platform would be nice, but either windows or os x is fine. Python would be ideal but anything that you could create python bindings for would be ok too.

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  • Python: win32console import problem

    - by David
    I want to run wexpect (the windows port of pexpect) on my Windows 7 64-bit machine. I am getting the following error: C:\Program Files (x86)\wexpect\build\libwexpect.py Traceback (most recent call last): File "C:\Program Files (x86)\wexpect\build\lib\wexpect.py", line 97, in raise ImportError(str(e) + "This package was intended for Windows like operating systems.") ImportError: No module named win32console This package requires the win32 python packages.This package was intended for Windows like operatin g systems. In the code it is failing on the following line: from win32console import * I am using Python 2.6.4. I cannot figure out how to install win32console.

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  • My python auto-login script is broken.

    - by user310392
    A long time ago, I wrote a little python script to automatically log me on to the wireless network at my office. Here is the code: #!/opt/local/bin/python from urllib2 import urlopen from ClientForm import ParseResponse try: if "Logged on as" in urlopen("https://MYWIRELESS.com/logon").read(): print "Already logged on." else: forms = ParseResponse(urlopen("https://MYWIRELESS.com/logon"), backwards_compat=False) form = forms[0] form["username"], form["password"] = "ME", "MYPASSWD" urlopen(form.click()) print "Logged on. (probably :-)"; except IOError, e: print "Couldn't connect to wireless login page:\n", e I changed computers recently, and it stopped working. Now, I get the error: File "login.txt", line 4, in <module> from ClientForm import ParseResponse ImportError: No module named ClientForm which makes it look like I don't have some package (ClientForm) installed, so I installed it (sudo port install py-clientform), but I still get the same error. Does anyone have an idea what I'm doing wrong?

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