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  • Perl - string matching issue

    - by user2886545
    I have a problem I cannot understand. I have this string: gene_id "siRNA_Z27kG1_20543"transcript_id "siRNA_Z27kG1_20543_X_1";tss_id "TSS124620" And I want to change the gene_id. So, I have the following code: if ($line =~ /;transcript_id "([A-Za-z0-9:\-._]*)(_[oxOX][_.][0-9]*)";/) { $num = $2; $line =~ s/gene_id "([A-Za-z0-9:\-._]*)";/gene_id "$1$num";/g; print $new $line."\n"; } The aim of my code is to change siRNA_Z27kG1_20543 for siRNA_Z27kG1_20543_X_1. However, my code does not produce that output. Why? I can't understand that. My regex needs to be as it is because I match other strings (this time with success). Thanks.

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  • pyplot.scatter changes the data limits of the axis

    - by Erotemic
    I have some code which plots some points. I substituted ax.scatter for ax.plot so I could control the color of each point individually. However when I make this change the axis x and y ranges seem to increase. I can't pinpoint why this is happening. The only thing I've changed is plot to scatter. This code makes an axis that is too big ax.scatter(x, y, c=color_list, s=pts_size, marker='o', edgecolor='none') #ax.plot(x, y, linestyle='None', marker='o', markerfacecolor=pts_color, markersize=pts_size, markeredgewidth=0) This code does the right thing (but I can't control the color) #ax.scatter(x, y, c=color_list, s=pts_size, marker='o', edgecolor='none') ax.plot(x, y, linestyle='None', marker='o', markerfacecolor=pts_color, markersize=pts_size, markeredgewidth=0) Is there a way I can call scatter such that it doesn't mess with my current axis limits?

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  • How can I embed a flash movie in a zend view programmatically?

    - by curro
    I have tried to embed a flash movie in a zend view using the htmlFlash helper. In theory you only have to pass the movie path to the htmlFlash helper in a phtml view: echo $this-htmlFlash('/path/to/myMovie.swf'); And the framework will generate the html code in the html page: <object data="/path/to/flash.swf" type="application/x-shockwave-flash" classid="clsid:D27CDB6E-AE6D-11cf-96B8-444553540000" codebase="http://download.macromedia.com/pub/shockwave/cabs/flash/swflash.cab"> </object> However, I have done so and the code doesn't appear on the source code. Has anyone had this problem? Thank you

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  • Don't show Data in DataGrid

    - by mSafdel
    Hi in my app, I used WCF Services for load data from SQL DB then in Completed Event Handler of my ServiceClient write this code: void svc_GetOrdersCompleted(object sender, GetOrdersCompletedEventArgs e) { if (e.Error == null) { dgOrders.ItemsSource = e.Result; txtStatus.Text = ""; } else txtStatus.Text = "Error occured while loading orders from database"; } dgOrders is my DataGrid and And AutoGenerateColumns set to True. in line 5: eResult have a number of Order objects but after this code DataGrid can't show data. Why? this ia my xaml for dgOrders: <data:DataGrid x:Name="dgOrders" Grid.Row="0" Grid.Column="1" AutoGenerateColumns="True" SelectionChanged="dgOrders_SelectionChanged" Foreground="Green"> </data:DataGrid> this is my Source code please guide me.

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  • HRESULT exception not caught in VS 2008

    - by arionik
    Hello all, I've got a stange situation in visual studio 2008 C++. I work on code that was originally written for visual studio 2003, where everything works well. Now, ported to VS 2008, the exception handling, which unfortuantely exists widely in the code, does not work anymore. standard code example: try { HRESULT hr = S_OK; // do stuff... if( FAILED( hr ) ) throw hr; } catch( HRESULT hr ) { // error handling, but we never get here } catch( ... ) { // ... not even here } Under VS 2008, no exception is encountered, but I get a crash somewhere else, indicating that the stack pointer must be screwed up. Did anybody come across this behaviour? Any help is appreciated.

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  • non-CDN Hosted jQuery caused strange some behaviour

    - by kwokwai
    Hi all, I was using this JQuery in this download link, and included it in the head tag of a HTML web page: <script type="text/javascript" src="http://code.jquery.com/jquery-latest.js"></script> In a php web page, I got these few lines of codes: $.ajax({ url: 'http://mywebsite.com/site1/toavail/, type: "post", success: function(data) { // some more code here } }); When I tested the HTML page in IE 6, and 7, I saw the same warning message: "permission denied" When I tested it in Firefox 3, nothing was returned from the server web page. Later, I changed the JQuery source link to be: http://code.jquery.com/jquery-1.4.2.js then I refreshed the web page, and I could saw the returned value.

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  • Confused by "let" in Clojure

    - by Tom Dalling
    I just started playing with Clojure, and I wrote a small script to help me understand some of the functions. It begins like this: (def *exprs-to-test* [ "(filter #(< % 3) '(1 2 3 4 3 2 1))" "(remove #(< % 3) '(1 2 3 4 3 2 1))" "(distinct '(1 2 3 4 3 2 1))" ]) Then it goes through *exprs-to-test*, evaluates them all, and prints the output like this: (doseq [exstr *exprs-to-test*] (do (println "===" (first (read-string exstr)) "=========================") (println "Code: " exstr) (println "Eval: " (eval (read-string exstr))) ) ) The above code is all working fine. However, (read-string exstr) is repeated so I tried to use let to eliminate the repetition like so: (doseq [exstr *exprs-to-test*] (let [ex (read-string exstr)] ( (do (println "===" (first ex) "=========================") (println "Code: " exstr) (println "Eval: " (eval ex)) ) )) ) But this works once for the first item in *exprs-to-test*, then crashes with a NullPointerException. Why is the addition of let causing the crash?

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  • Remove specific box with jquery

    - by Opoe
    Hi all, When you click Add a box. It adds a box with a deletlistbtn. Right now it removes all boxes with the same name/class/var. But i want the button to only delete the box/list its in. Can anyone tell me wich code i should use to accomplish that? Right now i use this code; $('.deletelistbtn').live('click', function() { $(redbox).remove(); }); this is my entire code http://jsfiddle.net/XsCAN/

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  • strenge exception phenomenon in win7

    - by Level 2
    Hello all, I spot some interesting artcles about exception handle in codeproject http://www.codeproject.com/KB/cpp/seexception.aspx after reading, I decided to do some experiment. The first time I try to excute the following code char *p; p[0] = 0; The program died without question. But After serveral time I execute the same problem binary code. It magically did fine. even the following code is doing well. any clue or explain? char *p p[1000] = 'd'; cout<<p[1000]<<endl; my os is windows 7 64bit and compiler is vs2008 rc1.

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  • c++: truth assignment warning with arguments?

    - by John
    I use the following to work with arguments in my programs, but it seems to just hand me a warning (just a warning): "warning: suggest parentheses around assignment used as truth value" The beginning of the code is as follows: enum{OPT_DISP_H = 0x2, OPT_DISP_W = 0x1}; int main(int argc, char *argv[]) { int opt = 0x00; char c; while((++argv)[0] && argv[0][0]=='-'){ while(c =* ++argv[0]) switch(c){ case 'h': opt |= OPT_DISP_H; break; //etc.. The while(c =* ++argv[0]) part being where the warning persists. The code works fine, but what does this warning mean opposed to what is used? I think the code is c = *++argv[0], using the pointer. So why does the single = work and what is really recommended to be used?

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  • FETCH INTO doesn't raise an exception if the set is empty, does it?

    - by Cade Roux
    Here is some actual code I'm trying to debug: BEGIN OPEN bservice (coservice.prod_id); FETCH bservice INTO v_billing_alias_id, v_billing_service_uom_id, v_summary_remarks; CLOSE bservice; v_service_found := 1; -- An empty fetch is expected for some services. EXCEPTION WHEN OTHERS THEN v_service_found := 0; END; When the parametrized cursor bservice(prod_id) is empty, it fetches NULL into the three variables and does not throw an exception. So whoever wrote this code expecting it to throw an exception was wrong, right? The comment seems to imply that and empty fetch is expected and then it sets a flag for later handling, but I think this code cannot possibly have been tested with empty sets either. Obviously, it should use bservice%NOTFOUND or bservice%FOUND or similar.

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  • Sum up values in SQL once all values are available

    - by James Brown
    I have events flowing into a MySQL database and I need to group and sum the events to transactions and store away into another table. The data looks like: +----+---------+------+-------+ | id | transid | code | value | +----+---------+------+-------+ | 1 | 1 | b | 12 | | 2 | 1 | i | 23 | | 3 | 2 | b | 34 | | 4 | 1 | e | 45 | | 5 | 3 | b | 56 | | 6 | 2 | i | 67 | | 7 | 2 | e | 78 | | 8 | 3 | i | 89 | | 9 | 3 | i | 90 | +----+---------+------+-------+ The events arrive in batches and I would like to create the transaction by summing up the values for each transid, like: select transid, sum(value) from eventtable group by transid; but only after all the events for that transid have arrived. That is determined by the event with the code e (b for the beginning, e for the end and i for varying amount of intermediates). Being a novice in SQL, how could I implement the requirement for the existance of the end code before the summing?

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  • Why does Perl allow mutual "use" relationships between modules?

    - by Haiyuan Zhang
    Let's say there are two modules that mutually use each other: package a; use b; sub p {} 1; package b; use a; 1; I think that it is systematically wrong to write code like the above, because the two modules will endlessly copy each other's code to themselves, but I can successfully run the following code, which makes me very surprised. Could any of you explain all of this to me? #! /usr/bin/perl use a; a->p();

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  • RSpec: in-depth differences between before(:all) and before(:each)

    - by gmile
    Ok, so I've ran into a very strange issue, directly connected with before blocks. I'm doing a integration testing via Watir and RSpec. For a simple test to check if user can perform a login I'm creating a 'user' record in the db by means of factory_girl. So I put the following code: before(:each) do @user = Factory(:user) end if "should perform a login" do # do stuff end In do stuff I call a browser and see how the user tries to login. Unfortunately, somehow he cannot do that — "Username isn't valid". After some investigation I discovered that if I put the code for creating user in before(:all) block, everything magically works. How's that? What's the difference between :all and :each in this context? Also, If I put the code for creating user actually in the test body, it still doesn't work (i.e. user somehow isn't added to the DB or something).

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  • Printf ubuntu Segmentation fault (core dumped)

    - by Someone
    I have this code: int a; printf("&a = %u\n",(unsigned)&a); printf("a\n"); printf("b\n"); printf("c\n"); printf("d\n"); I tried to print the pointer of a variable. But it fail on the row printf("a\n"); and says Segmentation fault (core dumped) Output: &a = 134525024 Segmentation fault (core dumped) When I remove the row printf("&a = %u\n",(unsigned)&a); from the code, its success. Output: a b c d What worng in my code?

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  • how to use a wav file in eclipse

    - by AlphaAndOmega
    I've been trying to add audio to a project I've been doing. I found some code on here for html that is also supposed to work with file but it keeps saying "Exception in thread "main" javax.sound.sampled.UnsupportedAudioFileException: could not get audio input stream from input file at javax.sound.sampled.AudioSystem.getAudioInputStream(Unknown Source) at LoopSound.main(LoopSound.java:15)" the code public class LoopSound { public static void main(String[] args) throws Throwable { File file = new File("c:\\Users\\rabidbun\\Pictures\\10177-m-001.wav"); Clip clip = AudioSystem.getClip(); // getAudioInputStream() also accepts a File or InputStream AudioInputStream wav = AudioSystem.getAudioInputStream( file ); clip.open(wav); // loop continuously clip.loop(-1000); SwingUtilities.invokeLater(new Runnable() { public void run() { // A GUI element to prevent the Clip's daemon Thread // from terminating at the end of the main() JOptionPane.showMessageDialog(null, "Close to exit!"); } }); } } What is wrong with the code?

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  • SQLite: 2 Problems by working with table

    - by TianDong
    Hallo all, I have a SQliteDatabase object db, i want to create a table in db with the following code db.execSQL("CREATE TABLE IF NOT EXISTS "+ TABLE2_NAME + " (exer_nr INTEGER PRIMARY KEY ,exerText varchar(250),answerA varchar(250),answerB varchar(250),answerC varchar(250),answerD varchar(250))"); An Error occur. Why? Is this too large? How can i fix it? Another problem: I want to insert a row into the table, whose "exerText" column contains the following code as part of it's content. main( ) { int m=12, n=34; printf("%d%d", m+ +,+ +n); printf("%d%d\n",n+ +,+ +m); } An Error occur because of the "" and '' symbols in the code. How can i fix this problem ? Thanks a lot

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  • How to set full control to a directory??

    - by smwikipedia
    I am using the following simple code to add full control to a directory, but it doesn't work. String dir_name = @"folder_full_path"; DirectorySecurity dir_security = Directory.GetAccessControl(dir_name); FileSystemAccessRule access_rule = new FileSystemAccessRule(@"AccountName", FileSystemRights.FullControl, AccessControlType.Allow); dSecurity.AddAccessRule(access_rule); Directory.SetAccessControl(dir_name, dir_security); But this code only set special permissions to the target folder. This code is almost the same as the MSDN sample. I am scratching my head for a reasonable explanation... Hope someone could shed some light on me. Many thanks.

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  • Reporting sanitized user input to the user via AJAX

    - by JimBo
    I am writing some code to give live feedback to the user on the validation of a form using AJAX. I have got it checking length and if the field is empty. Now I want it to sanitize the users input and if the sanatized input differs from the users original input then tell them which characters are not allowed. The code I have written so far works except some characters most notably a '£' symbol result in no response. I think it relates to json_encode and its encoding. Here is the code: $user_input = 'asdfsfs£'; $strip_array = str_split(strip($user_input)); $orig_array = str_split($user_input); $diff_array = array_diff($orig_array,$strip_array); $diff_str = implode(', ',$diff_array); $final = json_encode($diff_str); function strip($input){return htmlentities(strip_tags($input),ENT_QUOTES);} Hope someone can figure out a solution.

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  • Strange exception phenomenon in Windows 7

    - by Level 2
    I spot some interesting articles about exception handle in CodeProject http://www.codeproject.com/KB/cpp/seexception.aspx After reading, I decided to do some experiment. The first time I try to execute the following code char *p; p[0] = 0; The program died without question. But After several times when I executed the same problem binary code, it magically did fine. Even the following code is doing well. Any clue or explanation? char *p p[1000] = 'd'; cout<<p[1000]<<endl; My O/S is Windows 7 64bit and compiler is VS2008 rc1.

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  • .NET Runtime Object Browser.

    - by user290907
    Is there a framework which can be used in your application, to make it expose internal objects on some port for inspection. for.e.g. after i start my application in this case a GUI Application, and then say launch http://localhost:9100 then it should show me the statistics of the app. I played a bit with HttpListener accepting connections and then outputting raw HTML, it works fine for simple tasks, but there is too much worked involved if i have make a proper object browser. Thanks in Advance.

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  • Form submission and hyperlinks using GET and POST

    - by Jon
    I have a search resource, the user can perform searches by filling out a form and submitting it, the create action is called, the Search is saved, the show action is called, and the results are displayed. This all happens with the default POST, and all works fine. The user may want to save his search in the saved_search table (i don't use the Search table for this purpose as this table stores all searches for the purpose of compiling statistics, and gets cleared on a regular basis). Once the Search is saved, it can be re-run by clicking a hyperlink, this is where i start to get problems. I see no way of getting my hyperlink to run the create action of Search, with a POST request, and the necessary data. I then decided to try to get both form submission and the hyperlink to perform a search using a GET request, i was unable to get form_for to run my Search create action using a GET request, it always seems to get routed to my index action. Can someone suggest a good restful solution to this problem please. Many thanks

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  • Save the contents of manipulated div to a variable and pass to php file

    - by Danielle Zarcaro
    I have tried to use AJAX, but nothing I come up with seems to work correctly. I am creating a menu editor. I echo part of a file using php and manipulate it using javascript/jquery/ajax (I found the code for that here: http://www.prodevtips.com/2010/03/07/jquery-drag-and-drop-to-sort-tree/). Now I need to get the edited contents of the div (which has an unordered list in it) I am echoing and save it to a variable so I can write it to the file again. I couldn't get that resource's code to work so I'm trying to come up with another solution. If there is a code I can put into the $("#save").click(function(){ }); part of the javascript file, that would work, but the .post doesn't seem to want to work for me. If there is a way to initiate a php preg_match in an onclick, that would be the easiest. Any help would be greatly appreciated.

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  • Is there a way to force JUnit to fail on ANY unchecked exception, even if swallowed

    - by Uri
    I am using JUnit to write some higher level tests for legacy code that does not have unit tests. Much of this code "swallows" a variety of unchecked exceptions like NullPointerExceptions (e.g., by just printing stack trace and returning null). Therefore the unit test can pass even through there is a cascade of disasters at various points in the lower level code. Is there any way to have a test fail on the first unchecked exception even if they are swallowed? The only alternative I can think of is to write a custom JUnit wrapper that redirects System.err and then analyzes the output for exceptions.

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  • Long key press handling in android 1.5

    - by Kaillash
    Hi, I want to handle key press and long key press for the key code KEYCODE_BACK(back button). can any one suggest me how to do this in android 1.5(API level 3). Here is the code. public boolean onKeyDown(int keyCode, KeyEvent event) { if (keyCode == KeyEvent.KEYCODE_BACK) { if(event.getRepeatCount()==0) { // normal key press // But problem is, this code is hitting for long press also, how to avoid this } else { // Long key press //Do something here } // Always consume back key event by returning true //so that default behavior of back is overrided return true; } return super.onKeyDown(keyCode, event); }

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