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• php cli script hangs with no messages

  - by julio

  Hi-- I've written a PHP script that runs via SSH and nohup, meant to process records from a database and do stuff with them (eg. process some images, update some rows). It works fine with small loads, up to maybe 10k records. I have some larger datasets that process around 40k records (not a lot, I realize, but it adds up to a lot of work when each record requires the download and processing of up to 50 images). The larger datasets can take days to process. Sometimes I'll see in my debug logs memory errors, which are clear enough-- but sometimes the script just appears to "die" or go zombie on me. My tail of the debug log just stops, with no error messages, the tail of the nohup log ends with no error, and the process is still showing in a ps list, looking like this-- 26075 pts/0 S 745:01 /usr/bin/php ./import.php but no work is getting done. Can anyone give me some ideas on why a process would just quit? The obvious things (like a php script timeout and memory issues) are not a factor, as far as I can tell. Thanks for any tips PS-- this is hosted on a godaddy VDS (not my choice). I am sort of suspecting that godaddy has some kind of limits that might kick in on me despite what overrides I put in the code (such as set_time_limit(0);).

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• Break on EXC_BAD_ACCESS in XCode?

  - by jasonh

  I'm new to iPhone development and XCode in general and have no idea how to begin troubleshooting an EXC_BAD_ACCESS signal. How can I get XCode to break at the exact line that is causing the error? I can't seem to get XCode to stop on the line causing the problem, but I do see the following lines in my debug console: Sun Oct 25 15:12:14 jasonsmacbook TestProject[1289] : CGContextSetStrokeColorWithColor: invalid context Sun Oct 25 15:12:14 jasonsmacbook TestProject[1289] : CGContextSetLineWidth: invalid context Sun Oct 25 15:12:14 jasonsmacbook TestProject[1289] : CGContextAddPath: invalid context Sun Oct 25 15:12:14 jasonsmacbook TestProject[1289] : CGContextDrawPath: invalid context 2009-10-25 15:12:14.680 LanderTest[1289:207] *** -[CFArray objectAtIndex:]: message sent to deallocated instance 0x3c4e610 Now, I am attempting to draw to the context I retrieve from UIGraphicsGetCurrentContext() and pass to the object that I want to draw with. Further trial and error debugging and I found that an NSMutableArray I have a property for on my class was a zombie. I went into the init function for the class and here's the code I was using: if ((self = [super init])) { NSMutableArray *array = [NSMutableArray array]; self.terrainBlocks = array; [array release]; } return self; } I removed the [array release] line and it no longer gives me the EXC_BAD_ACCESS signal, but I'm now confused about why this works. I thought that when I used the property, it automatically retained it for me, and thus I should release it from within init so that I don't have a leak. I'm thoroughly confused about how this works and all the guides and Stackoverflow questions I've read only confuse me more about how to set properties within my init method. There seems to be no consensus as to which way is the best.

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• Tailing 'Jobs' with Perl under mod_perl

  - by Matthew

  Hi everyone, I've got this project running under mod_perl shows some information on a host. On this page is a text box with a dropdown that allows users to ping/nslookup/traceroute the host. The output is shown in the text box like a tail -f. It works great under CGI. When the user requests a ping it would make an AJAX call to the server, where it essentially starts the ping with the output going to a temp file. Then subsequent ajax calls would 'tail' the file so that the output was updated until the ping finished. Once the job finished, the temp file would be removed. However, under mod_perl no matter what I do I can's stop it from creating zombie processes. I've tried everything, double forking, using IPC::Run etc. In the end, system calls are not encouraged under mod_perl. So my question is, maybe there's a better way to do this? Is there a CPAN module available for creating command line jobs and tailing output that will work under mod_perl? I'm just looking for some suggestions. I know I could probably create some sort of 'job' daemon that I signal with details and get updates from. It would run the commands and keep track of their status etc. But is there a simpler way? Thanks in advance.

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• Submitting R jobs using PBS

  - by Tony

  I am submitting a job using qsub that runs parallelized R. My intention is to have R programme running on 4 different cores rather than 8 cores. Here are some of my settings in PBS file: #PBS -l nodes=1:ppn=4 .... time R --no-save < program1.R > program1.log I am issuing the command "ta job_id" and I'm seeing that 4 cores are listed. However, the job occupies a large amount of memory(31944900k used vs 32949628k total). If I were to use 8 cores, the jobs got hang due to memory limitation. top - 21:03:53 up 77 days, 11:54, 0 users, load average: 3.99, 3.75, 3.37 Tasks: 207 total, 5 running, 202 sleeping, 0 stopped, 0 zombie Cpu(s): 30.4%us, 1.6%sy, 0.0%ni, 66.8%id, 0.0%wa, 0.0%hi, 1.2%si, 0.0%st Mem: 32949628k total, 31944900k used, 1004728k free, 269812k buffers Swap: 2097136k total, 8360k used, 2088776k free, 6030856k cached Here is a snapshot when issuing command ta job_id PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 1794 x 25 0 6247m 6.0g 1780 R 99.2 19.1 8:14.37 R 1795 x 25 0 6332m 6.1g 1780 R 99.2 19.4 8:14.37 R 1796 x 25 0 6242m 6.0g 1784 R 99.2 19.1 8:14.37 R 1797 x 25 0 6322m 6.1g 1780 R 99.2 19.4 8:14.33 R 1714 x 18 0 65932 1504 1248 S 0.0 0.0 0:00.00 bash 1761 x 18 0 63840 1244 1052 S 0.0 0.0 0:00.00 20016.hpc 1783 x 18 0 133m 7096 1128 S 0.0 0.0 0:00.00 python 1786 x 18 0 137m 46m 2688 S 0.0 0.1 0:02.06 R How can I prevent other users to use the other 4 cores? I like to mask somehow that my job is using 8 cores with 4 cores idling. Could anyone kindly help me out on this? Can this be solved using pbs? Many Thanks

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• Debugged Program Window Won't Close

  - by Marc Bernier

  Hi, I'm using VS 2008 on a 64-bit XP machine. I'm debugging a 32-bit C++ DLL via a console program. The DLL and EXE projects are contained in the same SLN so that I can modify the DLL as I test. What happens is that every once in a while I kill the program with Debug | Stop Debugging (Shift-F5). VS stops the program, but the console window stays open! If I'm sitting at a breakpoint and hit Shift-F5, it will terminate properly, but if the program is running full-tilt when I stop it, I often see this instead. The big problem is that I can't close these zombie windows. Using End Task in Task Manager does nothing (no message, no nothing). When I shut down the machine, it is unable to due to the orphans and I have to resort to actually turning off the power. I think this is connected to having the DLL and EXE project in the same SLN, as for months I worked on this project in 2 VS instances, one for the DLL and the other for the EXE. I would continually jump back and forth between the windows as I worked. This problem never happened until I put the two projects into a single SLN. The single SLN works a lot better, but this anomaly is very irritating. Any ideas anyone? UPDATE After a bit of searching (here), I found that it appears to have to do with one of the updates from last Tuesday (KB977165 or KB978037). Thank you Microsoft for your excellent pre-release testing.

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• How do I see if an established socket is stuck on a server that's expecting input?

  - by Parker

  I have a script that scans ports for open proxy servers. Problem is if it encounters a login program (specifically telnet) then it hangs there forever since it doesn't know what to do and eventually the server closes the connection. The simple solution would be to create a bunch of cases. If telnet, do this. If SSH, do that. If something else, blah blah blah. I'd like an umbrella solution since the script is not a high priority for me. The script, as it is now, is available at http://parkrrr.net/socks/scan.phps On a small scale (the page maybe averages 15 hits/day) it's fine but on a larger scale I'd be worried about a lot of open zombie sockets. Swapping the !$strpos doesn't work since servers can return more information than what you requested (headers, ads, etc). Only accepting a fixed number of bytes (as opposed to appending until EOF, which it does now) from the $fgets also does not seem to work. I am sure this is where it gets stuck: while (!feof($fp)) { $data.=fgets($fp,512); } But what can I do? Any other suggestions/warnings would also be welcomed.

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• Catching the return of main function before it deallocates resources

  - by EpsilonVector

  I'm trying to implement user threads in Linux kernel 2.4, and I ran into something problematic and unexpected. Background: a thread basically executes a single function and dies, except that when I call thread_create for the first time it must turn main() into a thread as well (by default it is not a thread until the first call, which is also when all the related data structures are allocated). Since a thread executes a function and dies, we don't need to "return" anywhere with it, but we do need to save the return value to be reclaimed later with thread_join, so the hack I came up with was: when I allocate the thread stack I place a return address that points to a thread_return_handler function, which deallocates the thread, makes it a zombie, and saves its return value for later. This works for "just run a function and die" threads, but is very problematic with the main thread. Since it actually is the main function, if it returns before the other threads finish the normal return mechanism kicks in, and deallocates all the shared resources, thus screwing up all the running threads. I need to keep it from doing that. Any ideas on how it can be done?

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• Use of Java [Interfaces / Abstract classes]

  - by Samuel

  Hello, Lately i decided to take a look at Java so i am still pretty new to it and also to the approach of OO programming, so i wanted to get some things straight before learning more, (i guess it's never to soon to start with good practices). I am programming a little 2D game for now but i think my question applies to any non trivial project. For the simplicity i'll provide examples from my game. I have different kinds of zombies, but they all have the same attributes (x, y, health, attack etc) so i wrote an interface Zombie which i implement by WalkingZombie, RunningZombie TeleportingZombie etc. Is this the best thing to do? Am i better of with an abstract class? Or with a super class? (I am not planning to partially implement functions - therefor my choice for an interface instead of an abstract class) I have one class describing the main character (Survivor) and since it is pretty big i wanted to write an interface with the different functions, so that i can easily see and share the structure of it. Is it good practice? Or is it simply a waste of space and time? I hope this question will not be rated as subjective because i thought that experienced programmers won't disagree about this kind of topic since the use of interfaces / super classes / abstract classes follows logical rules and is thereby not simply a personal choice. Thank you for your time -Samuel

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• PHP-FPM High Memory Usage

  - by Ruel

  I have a wordpress blog, that uses WP-SuperCache, and normally I get 100 visitors per day. With nginx + php-fpm it's blazing fast, and I have no regrets. One thing i noticed, php-fpm takes a lot of memory: top - 09:20:43 up 5 days, 15:53, 1 user, load average: 0.00, 0.00, 0.00 Tasks: 26 total, 1 running, 25 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 1048576k total, 329956k used, 718620k free, 0k buffers Swap: 0k total, 0k used, 0k free, 0k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 10226 www-data 15 0 145m 52m 4584 S 0.0 5.1 0:07.55 php-fpm 10223 www-data 16 0 141m 48m 4692 S 0.0 4.8 0:08.70 php-fpm 20277 www-data 15 0 138m 46m 4368 S 0.0 4.5 0:07.55 php-fpm 20259 www-data 15 0 133m 41m 4600 S 0.0 4.0 0:06.68 php-fpm 12201 www-data 15 0 133m 41m 4632 S 0.0 4.0 0:08.31 php-fpm 11586 www-data 15 0 132m 40m 4292 S 0.0 3.9 0:03.27 php-fpm 29822 www-data 15 0 128m 36m 4356 S 0.0 3.6 0:05.26 php-fpm 28427 mysql 15 0 200m 7300 4764 S 0.0 0.7 0:47.89 mysqld 10202 root 18 0 98.3m 4320 1204 S 0.0 0.4 0:03.80 php-fpm 22524 root 18 0 86064 3396 2652 S 0.0 0.3 0:16.74 sshd 9882 www-data 18 0 42052 2572 804 S 0.0 0.2 0:27.52 nginx 9884 www-data 18 0 42052 2560 804 S 0.0 0.2 0:26.26 nginx 9881 www-data 18 0 42064 2524 804 S 0.0 0.2 0:29.24 nginx 9879 www-data 18 0 42032 2480 804 S 0.0 0.2 0:29.58 nginx 23771 root 15 0 12176 1820 1316 S 0.0 0.2 0:00.08 bash 28344 root 22 0 11932 1416 1184 S 0.0 0.1 0:00.00 mysqld_safe 18167 root 16 0 62628 1208 648 S 0.0 0.1 0:00.55 sshd 25941 root 15 0 12612 1192 928 R 0.0 0.1 0:02.21 top 11573 root 15 0 20876 1168 592 S 0.0 0.1 0:00.67 crond 9878 root 18 0 41000 1112 284 S 0.0 0.1 0:00.00 nginx 21736 root 23 0 21648 936 716 S 0.0 0.1 0:00.00 xinetd 11585 root 18 0 46748 816 428 S 0.0 0.1 0:00.00 saslauthd 14125 root 12 -4 12768 768 452 S 0.0 0.1 0:00.00 udevd 1 root 18 0 10352 728 616 S 0.0 0.1 0:17.93 init 24564 root 15 0 5912 680 544 S 0.0 0.1 0:01.90 syslogd 11618 root 18 0 46748 548 160 S 0.0 0.1 0:00.00 saslauthd Here's my php-fpm config: [global] pid = run/php-fpm.pid error_log = log/php-fpm.log log_level = notice [www] listen = 127.0.0.1:9000 user = www-data group = www-data pm = dynamic pm.max_children = 50 pm.start_servers = 3 pm.min_spare_servers = 3 pm.max_spare_servers = 10 pm.max_requests = 500 Sometimes it goes up to 400MB. And I'm planning to add a new website on my VPS. Is this normal?

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• Apache taking up too much CPU

  - by andrewtweber

  I'm trying to manage a server on Amazon for a network of sites that receives about 100 million pageviews per month. Unfortunately, nobody out of my team of 5 developers has much server admin experience. Right now we have the MaxClients set to 1400. Currently our traffic is about average, and we have 1150 total Apache processes running, which use about 2% CPU each! Out of those 1150, 800 of them are currently sleeping, but still taking up CPU. I'm sure there are ways to optimize this. I have a few thoughts: It appears Apache is creating a new process for every single connection. Is this normal? Is there a way to more quickly kill the sleeping processes? Should we turn KeepAlive on? Each page loads about 15-20 medium-sized graphics and a lot of javascript/css. So, here's our Apache setup. We do plan on contracting a server admin asap, but I would really appreciate some advice until we can find someone. Timeout 25 KeepAlive Off MaxKeepAliveRequests 200 KeepAliveTimeout 5 <IfModule prefork.c> StartServers 100 MinSpareServers 20 MaxSpareServers 50 ServerLimit 1400 MaxClients 1400 MaxRequestsPerChild 5000 </IfModule> <IfModule worker.c> StartServers 4 MaxClients 400 MinSpareThreads 25 MaxSpareThreads 75 ThreadsPerChild 25 MaxRequestsPerChild 0 </IfModule> Full top output: top - 23:44:36 up 1 day, 6:43, 4 users, load average: 379.14, 379.17, 377.22 Tasks: 1153 total, 379 running, 774 sleeping, 0 stopped, 0 zombie Cpu(s): 71.9%us, 26.2%sy, 0.0%ni, 0.0%id, 0.0%wa, 0.0%hi, 1.9%si, 0.0%st Mem: 70343000k total, 23768448k used, 46574552k free, 527376k buffers Swap: 0k total, 0k used, 0k free, 10054596k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 1756 mysql 20 0 10.2g 1.8g 5256 S 19.8 2.7 904:41.13 mysqld 21515 apache 20 0 396m 18m 4512 R 2.1 0.0 0:34.42 httpd 21524 apache 20 0 396m 18m 4032 R 2.1 0.0 0:32.63 httpd 21544 apache 20 0 394m 16m 4084 R 2.1 0.0 0:36.38 httpd 21643 apache 20 0 396m 18m 4360 R 2.1 0.0 0:34.20 httpd 21817 apache 20 0 396m 17m 4064 R 2.1 0.0 0:38.22 httpd 22134 apache 20 0 395m 17m 4584 R 2.1 0.0 0:35.62 httpd 22211 apache 20 0 397m 18m 4104 R 2.1 0.0 0:29.91 httpd 22267 apache 20 0 396m 18m 4636 R 2.1 0.0 0:35.29 httpd 22334 apache 20 0 397m 18m 4096 R 2.1 0.0 0:34.86 httpd 22549 apache 20 0 395m 17m 4056 R 2.1 0.0 0:31.01 httpd 22612 apache 20 0 397m 19m 4152 R 2.1 0.0 0:34.34 httpd 22721 apache 20 0 396m 18m 4060 R 2.1 0.0 0:32.76 httpd 22932 apache 20 0 396m 17m 4020 R 2.1 0.0 0:37.34 httpd 22933 apache 20 0 396m 18m 4060 R 2.1 0.0 0:34.77 httpd 22949 apache 20 0 396m 18m 4060 R 2.1 0.0 0:34.61 httpd 22956 apache 20 0 402m 24m 4072 R 2.1 0.0 0:41.45 httpd

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• Server load spikes several times a day, load average for the past month is 5 times the load average all year

  - by AMF

  My Munin notifications set up for our (Debian) LAMP cluster have been notifying me continuously that our load on our production machine has been at dangerous levels. While the average load all year typically runs between 2 and 8, the load in the past month and only the past month -- has been skyrocketing to 10, 18, and occasionally even 50-60. The spikes last only 5-10 minutes at a time and occur about every 2-3 hours. The spikes do not effect performance only because I have a script that sends traffic off our server to a mirror CDN when the load goes above 10. I've looked for cron jobs that correlate with this timeframe but there is nothing I can see that would cause this. Site traffic is also normal (we receive about 200K visits per day). I'm also trying to think of anything I've changed around the time this problem began, and I really cannot think of anything. This is probably not much to go on. Maybe there is a clue in the top print-out (below) that I'm not seeing. How do I proceed to find the cause? -- Typical top when the load is NOT spiking: top - 11:13:09 up 472 days, 25 min, 1 user, load average: 6.08, 4.29, 3.80 Tasks: 105 total, 1 running, 104 sleeping, 0 stopped, 0 zombie Cpu(s): 41.2%us, 5.8%sy, 0.0%ni, 49.5%id, 2.7%wa, 0.1%hi, 0.7%si, 0.0%st Mem: 3369592k total, 2166980k used, 1202612k free, 559504k buffers Swap: 2650684k total, 1892k used, 2648792k free, 1129116k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 32046 apache 15 0 36300 12m 9828 S 20 0.4 0:01.97 apache2 32679 apache 15 0 36568 13m 10m S 19 0.4 0:01.69 apache2 31441 apache 15 0 36616 13m 10m S 19 0.4 0:04.13 apache2 31477 apache 15 0 36596 13m 9.8m S 15 0.4 0:01.99 apache2 31993 apache 15 0 36876 16m 12m S 12 0.5 0:02.01 apache2 31782 apache 15 0 36836 14m 10m S 8 0.4 0:02.17 apache2 32198 apache 15 0 36536 13m 10m S 7 0.4 0:01.59 apache2 880 apache 15 0 36508 9708 6236 S 7 0.3 0:00.42 apache2 31945 apache 17 0 36876 16m 13m S 5 0.5 0:03.17 apache2 32197 apache 16 0 36636 10m 7504 S 5 0.3 0:02.70 apache2 32326 apache 15 0 37024 11m 7632 S 5 0.3 0:02.15 apache2 32565 apache 15 0 37280 13m 9.8m S 5 0.4 0:03.75 apache2 32676 apache 15 0 36896 16m 12m S 4 0.5 0:00.95 apache2 32678 apache 15 0 36536 12m 9692 S 4 0.4 0:02.27 apache2 974 apache 16 0 37064 9888 6016 D 4 0.3 0:00.13 apache2 32150 apache 16 0 36832 13m 10m S 3 0.4 0:01.74 apache2 31780 apache 16 0 36848 11m 7660 S 3 0.3 0:02.87 apache2

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• Slow Memcached: Average 10ms memcached `get`

  - by Chris W.

  We're using Newrelic to measure our Python/Django application performance. Newrelic is reporting that across our system "Memcached" is taking an average of 12ms to respond to commands. Drilling down into the top dozen or so web views (by # of requests) I can see that some Memcache get take up to 30ms; I can't find a single use of Memcache get that returns in less than 10ms. More details on the system architecture: Currently we have four application servers each of which has a memcached member. All four memcached members participate in a memcache cluster. We're running on a cloud hosting provider and all traffic is running across the "internal" network (via "internal" IPs) When I ping from one application server to another the responses are in ~0.5ms Isn't 10ms a slow response time for Memcached? As far as I understand if you think "Memcache is too slow" then "you're doing it wrong". So am I doing it wrong? Here's the output of the memcache-top command: memcache-top v0.7 (default port: 11211, color: on, refresh: 3 seconds) INSTANCE USAGE HIT % CONN TIME EVICT/s GETS/s SETS/s READ/s WRITE/s cache1:11211 37.1% 62.7% 10 5.3ms 0.0 73 9 3958 84.6K cache2:11211 42.4% 60.8% 11 4.4ms 0.0 46 12 3848 62.2K cache3:11211 37.5% 66.5% 12 4.2ms 0.0 75 17 6056 170.4K AVERAGE: 39.0% 63.3% 11 4.6ms 0.0 64 13 4620 105.7K TOTAL: 0.1GB/ 0.4GB 33 13.9ms 0.0 193 38 13.5K 317.2K (ctrl-c to quit.) ** Here is the output of the top command on one machine: ** (Roughly the same on all cluster machines. As you can see there is very low CPU utilization, because these machines only run memcache.) top - 21:48:56 up 1 day, 4:56, 1 user, load average: 0.01, 0.06, 0.05 Tasks: 70 total, 1 running, 69 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.0%sy, 0.0%ni, 99.7%id, 0.0%wa, 0.0%hi, 0.0%si, 0.3%st Mem: 501392k total, 424940k used, 76452k free, 66416k buffers Swap: 499996k total, 13064k used, 486932k free, 181168k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 6519 nobody 20 0 384m 74m 880 S 1.0 15.3 18:22.97 memcached 3 root 20 0 0 0 0 S 0.3 0.0 0:38.03 ksoftirqd/0 1 root 20 0 24332 1552 776 S 0.0 0.3 0:00.56 init 2 root 20 0 0 0 0 S 0.0 0.0 0:00.00 kthreadd 4 root 20 0 0 0 0 S 0.0 0.0 0:00.00 kworker/0:0 5 root 20 0 0 0 0 S 0.0 0.0 0:00.02 kworker/u:0 6 root RT 0 0 0 0 S 0.0 0.0 0:00.00 migration/0 7 root RT 0 0 0 0 S 0.0 0.0 0:00.62 watchdog/0 8 root 0 -20 0 0 0 S 0.0 0.0 0:00.00 cpuset 9 root 0 -20 0 0 0 S 0.0 0.0 0:00.00 khelper ...output truncated...

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• Excessive CPU Utilization for Bind 9.8.1 `named` processes

  - by justinzane

  I just noticed that named is eating vast amounts of CPU time for a very small network with only a few domains. Can someone help me determine what is misconfigured, please? Or how to debug this. top top - 14:13:08 up 25 days, 14:16, 1 user, load average: 1.04, 1.04, 1.05 Tasks: 149 total, 1 running, 148 sleeping, 0 stopped, 0 zombie %Cpu(s): 17.3 us, 4.3 sy, 0.0 ni, 78.2 id, 0.1 wa, 0.0 hi, 0.0 si, 0.0 st KiB Mem: 2042776 total, 1347916 used, 694860 free, 249396 buffers KiB Swap: 3976080 total, 30552 used, 3945528 free, 574164 cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 17445 bind 20 0 244m 42m 3124 S 99.4 2.2 2345:03 named rndc stats +++ Statistics Dump +++ (1352931389) ++ Incoming Requests ++ 65869 QUERY ++ Incoming Queries ++ 31809 A 241 NS 3 CNAME 27455 SOA 276 PTR 123 MX 462 TXT 5400 AAAA 7 A6 1 DS 14 DNSKEY 15 SPF 55 AXFR 8 ANY ++ Outgoing Queries ++ [View: internal] 22206 A 509 NS 10 SOA 25 PTR 12 MX 524 TXT 4851 AAAA 62 DNSKEY 19 SPF 3157 DLV [View: external] 87 A 2 NS 80 AAAA 120 DNSKEY 7 DLV [View: _bind] ++ Name Server Statistics ++ 65869 IPv4 requests received 27670 requests with EDNS(0) received 112 TCP requests received 65652 responses sent 20 truncated responses sent 27670 responses with EDNS(0) sent 62920 queries resulted in successful answer 37117 queries resulted in authoritative answer 28482 queries resulted in non authoritative answer 7 queries resulted in referral answer 591 queries resulted in nxrrset 53 queries resulted in SERVFAIL 2081 queries resulted in NXDOMAIN 14530 queries caused recursion 162 duplicate queries received 55 requested transfers completed ++ Zone Maintenance Statistics ++ 109536 IPv4 notifies sent ++ Resolver Statistics ++ [Common] [View: internal] 29362 IPv4 queries sent 2013 IPv6 queries sent 28531 IPv4 responses received 4209 NXDOMAIN received 6 SERVFAIL received 31 FORMERR received 32 EDNS(0) query failures 3359 query retries 836 query timeouts 5348 IPv4 NS address fetches 3271 IPv6 NS address fetches 83 IPv4 NS address fetch failed 2779 IPv6 NS address fetch failed 17421 DNSSEC validation attempted 12731 DNSSEC validation succeeded 4690 DNSSEC NX validation succeeded 21104 queries with RTT 10-100ms 7418 queries with RTT 100-500ms 3 queries with RTT 500-800ms 1 queries with RTT 800-1600ms [View: external] 192 IPv4 queries sent 104 IPv6 queries sent 192 IPv4 responses received 2 NXDOMAIN received 104 query retries 44 IPv4 NS address fetches 44 IPv6 NS address fetches 1 IPv4 NS address fetch failed 1 IPv6 NS address fetch failed 4 DNSSEC validation attempted 3 DNSSEC validation succeeded 1 DNSSEC NX validation succeeded 152 queries with RTT 10-100ms 40 queries with RTT 100-500ms [View: _bind] ++ Cache DB RRsets ++ [View: internal (Cache: internal)] 2007 A 652 NS 131 CNAME 1 MX 32 TXT 421 AAAA 28 DS 244 RRSIG 110 NSEC 3 DNSKEY 2 !A 2 !TXT 89 !AAAA 2 !SPF 14 !DLV 148 NXDOMAIN [View: external (Cache: external)] 55 A 12 NS 34 AAAA 2 DS 10 RRSIG 1 DNSKEY [View: _bind (Cache: _bind)] ++ Socket I/O Statistics ++ 82958 UDP/IPv4 sockets opened 2118 UDP/IPv6 sockets opened 4 TCP/IPv4 sockets opened 1 TCP/IPv6 sockets opened 82956 UDP/IPv4 sockets closed 2117 UDP/IPv6 sockets closed 58 TCP/IPv4 sockets closed 15 UDP/IPv4 socket bind failures 2117 UDP/IPv6 socket connect failures 29554 UDP/IPv4 connections established 59 TCP/IPv4 connections accepted 2117 UDP/IPv6 send errors 5 UDP/IPv4 recv errors ++ Per Zone Query Statistics ++ --- Statistics Dump --- (1352931389)

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• ffmpeg not using all cores

  - by user2783132

  I just got my new server with two intel e5-2695 but I was shocked to see that ffmpeg or ubuntu doesn't utilize all cores. top while ffmpeg was running top - 23:35:25 up 2:41, 2 users, load average: 5.35, 4.37, 3.12 Tasks: 333 total, 2 running, 331 sleeping, 0 stopped, 0 zombie %Cpu0 : 0.0 us, 1.0 sy, 35.6 ni, 63.4 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu1 : 0.0 us, 0.7 sy, 35.5 ni, 63.9 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu2 : 0.0 us, 0.7 sy, 33.4 ni, 65.9 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu3 : 0.0 us, 0.0 sy, 32.7 ni, 67.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu4 : 0.0 us, 0.3 sy, 32.3 ni, 67.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu5 : 0.0 us, 0.3 sy, 33.0 ni, 66.7 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu6 : 0.0 us, 0.0 sy, 32.6 ni, 67.4 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu7 : 0.0 us, 0.3 sy, 32.7 ni, 67.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu8 : 0.0 us, 0.7 sy, 32.6 ni, 66.8 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu9 : 0.0 us, 0.3 sy, 33.9 ni, 65.8 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu10 : 0.0 us, 0.0 sy, 35.0 ni, 65.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu11 : 0.0 us, 0.7 sy, 30.0 ni, 69.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu12 : 21.1 us, 0.0 sy, 0.0 ni, 78.9 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu13 : 0.7 us, 0.0 sy, 4.3 ni, 95.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu14 : 0.3 us, 0.0 sy, 5.0 ni, 94.6 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu15 : 24.9 us, 0.0 sy, 0.0 ni, 75.1 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu16 : 0.3 us, 0.0 sy, 3.7 ni, 96.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu17 : 0.7 us, 0.3 sy, 4.9 ni, 94.1 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu18 : 1.0 us, 0.0 sy, 4.6 ni, 94.4 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu19 : 0.7 us, 0.0 sy, 4.7 ni, 94.7 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu20 : 11.1 us, 0.0 sy, 0.0 ni, 88.9 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu21 : 1.3 us, 0.0 sy, 4.6 ni, 94.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu22 : 2.0 us, 0.3 sy, 4.3 ni, 93.4 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu23 : 96.7 us, 1.0 sy, 0.0 ni, 2.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu24 : 0.0 us, 0.0 sy, 0.7 ni, 99.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu25 : 0.0 us, 0.0 sy, 3.0 ni, 97.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu26 : 0.0 us, 0.0 sy, 1.3 ni, 98.7 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu27 : 0.0 us, 0.0 sy, 4.0 ni, 96.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu28 : 0.0 us, 0.0 sy, 1.7 ni, 98.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu29 : 0.0 us, 0.0 sy, 1.7 ni, 98.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu30 : 0.0 us, 0.0 sy, 1.7 ni, 98.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu31 : 0.0 us, 0.0 sy, 1.0 ni, 99.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu32 : 0.0 us, 0.0 sy, 0.7 ni, 99.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu33 : 0.0 us, 0.0 sy, 1.7 ni, 98.3 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu34 : 0.0 us, 0.0 sy, 2.0 ni, 98.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu35 : 0.0 us, 0.0 sy, 1.0 ni, 99.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st %Cpu36 : 0.0 us, 0.0 sy, 0.0 ni,100.0 id, 0.0 wa, 0.0 hi, 0.0 si, 0.0 st ffmpeg was sent with -threads 0 *I also tried sending ffmoeg with -threads 500- no difference

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• Apache and MySQL taking all the memory? Maximum connections?

  - by lpfavreau

  I've a had one of our servers going down (network wise) but keeping its uptime (so looks the server is not losing its power) recently. I've asked my hosting company to investigate and I've been told, after investigation, that Apache and MySQL were at all time using 80% of the memory and peaking at 95% and that I might be needing to add some more RAM to the server. One of their justifications to adding more RAM was that I was using the default max connections setting (125 for MySQL and 150 for Apache) and that for handling those 150 simultaneous connections, I would need at least 3Gb of memory instead of the 1Gb I have at the moment. Now, I understand that tweaking the max connections might be better than me leaving the default setting although I didn't feel it was a concern at the moment, having had servers with the same configuration handle more traffic than the current 1 or 2 visitors before the lunch, telling myself I'd tweak it depending on the visits pattern later. I've also always known Apache was more memory hungry under default settings than its competitor such as nginx and lighttpd. Nonetheless, looking at the stats of my machine, I'm trying to see how my hosting company got those numbers. I'm getting: # free -m total used free shared buffers cached Mem: 1000 944 56 0 148 725 -/+ buffers/cache: 71 929 Swap: 1953 0 1953 Which I guess means that yes, the server is reserving around 95% of its memory at the moment but I also thought it meant that only 71 out of the 1000 total were really used by the applications at the moment looking a the buffers/cache row. Also I don't see any swapping: # vmstat 60 procs -----------memory---------- ---swap-- -----io---- -system-- ----cpu---- r b swpd free buff cache si so bi bo in cs us sy id wa 0 0 0 57612 151704 742596 0 0 1 1 3 11 0 0 100 0 0 0 0 57604 151704 742596 0 0 0 1 1 24 0 0 100 0 0 0 0 57604 151704 742596 0 0 0 2 1 18 0 0 100 0 0 0 0 57604 151704 742596 0 0 0 0 1 13 0 0 100 0 And finally, while requesting a page: top - 08:33:19 up 3 days, 13:11, 2 users, load average: 0.06, 0.02, 0.00 Tasks: 81 total, 1 running, 80 sleeping, 0 stopped, 0 zombie Cpu(s): 1.3%us, 0.3%sy, 0.0%ni, 98.3%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 1024616k total, 976744k used, 47872k free, 151716k buffers Swap: 2000052k total, 0k used, 2000052k free, 742596k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 24914 www-data 20 0 26296 8640 3724 S 2 0.8 0:00.06 apache2 23785 mysql 20 0 125m 18m 5268 S 1 1.9 0:04.54 mysqld 24491 www-data 20 0 25828 7488 3180 S 1 0.7 0:00.02 apache2 1 root 20 0 2844 1688 544 S 0 0.2 0:01.30 init ... So, I'd like to know, experts of serverfault: Do I really need more RAM at the moment? How do they calculate that for 150 simultaneous connections I'd need 3Gb? Thanks for your help!

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• Disk IO causing high load on Xen/CentOS guest

  - by Peter Lindqvist

  I'm having serious issues with a xen based server, this is on the guest partition. It's a paravirtualized CentOS 5.5. The following numbers are taken from top while copying a large file over the network. If i copy the file another time the speed decreases in relation to load average. So the second time it's half the speed of the first time. It needs some time to cool off after this. Load average slowly decreases until it's once again usable. ls / takes about 30 seconds. top - 13:26:44 up 13 days, 21:44, 2 users, load average: 7.03, 5.08, 3.15 Tasks: 134 total, 2 running, 132 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.1%sy, 0.0%ni, 25.3%id, 74.5%wa, 0.0%hi, 0.0%si, 0.1%st Mem: 1048752k total, 1041460k used, 7292k free, 3116k buffers Swap: 2129912k total, 40k used, 2129872k free, 904740k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 1506 root 10 -5 0 0 0 S 0.3 0.0 0:03.94 cifsd 1 root 15 0 2172 644 556 S 0.0 0.1 0:00.08 init Meanwhile the host is ~0.5 load avg and steady over time. ~50% wait Server hardware is dual xeon, 3gb ram, 170gb scsi 320 10k rpm, and shouldn't have any problems with copying files over the network. disk = [ "tap:aio:/vm/dev01.img,xvda,w" ] I also get these in the log INFO: task syslogd:1350 blocked for more than 120 seconds. "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message. syslogd D 00062E4F 2208 1350 1 1353 1312 (NOTLB) c0ef0ed0 00000286 6e71a411 00062e4f c0ef0f18 00000009 c0f20000 6e738bfd 00062e4f 0001e7ec c0f2010c c181a724 c1abd200 00000000 ffffffff c0ef0ecc c041a180 00000000 c0ef0ed8 c03d6a50 00000000 00000000 c03d6a00 00000000 Call Trace: [<c041a180>] __wake_up+0x2a/0x3d [<ee06a1ea>] log_wait_commit+0x80/0xc7 [jbd] [<c043128b>] autoremove_wake_function+0x0/0x2d [<ee065661>] journal_stop+0x195/0x1ba [jbd] [<c0490a32>] __writeback_single_inode+0x1a3/0x2af [<c04568ea>] do_writepages+0x2b/0x32 [<c045239b>] __filemap_fdatawrite_range+0x66/0x72 [<c04910ce>] sync_inode+0x19/0x24 [<ee09b007>] ext3_sync_file+0xaf/0xc4 [ext3] [<c047426f>] do_fsync+0x41/0x83 [<c04742ce>] __do_fsync+0x1d/0x2b [<c0405413>] syscall_call+0x7/0xb ======================= I have tried disabling irqbalanced as suggested here but it does not seem to make any difference.

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• centos 6 ps aux hangs up

  - by Guntis

  I have problem with my server. Server is running centos 6 (CloudLinux Server release 6.2). uname -a = 2.6.32-320.4.1.lve1.1.4.el6.x86_64 That is a kvm guest. On host is debian 6. If i run command ps aux, it stuck on random process (shows some processes only), top command is working fine. htop doesn't work too (black screen). top - 12:11:51 up 34 min, 1 user, load average: 4.26, 6.71, 16.15 Tasks: 201 total, 7 running, 192 sleeping, 0 stopped, 2 zombie Cpu(s): 7.9%us, 2.8%sy, 0.0%ni, 87.5%id, 1.6%wa, 0.0%hi, 0.2%si, 0.0%st Mem: 9862044k total, 2359484k used, 7502560k free, 171720k buffers Swap: 10485720k total, 0k used, 10485720k free, 1336872k cached server has one Intel(R) Xeon(R) CPU E5606 @ 2.13GHz, free -m total used free shared buffers cached Mem: 9630 2336 7293 0 170 1324 -/+ buffers/cache: 841 8789 Swap: 10239 0 10239 php -v PHP 5.3.19 (cli) (built: Nov 28 2012 10:03:07) Copyright (c) 1997-2012 The PHP Group Zend Engine v2.3.0, Copyright (c) 1998-2012 Zend Technologies with the ionCube PHP Loader v4.2.2, Copyright (c) 2002-2012, by ionCube Ltd., and with Zend Guard Loader v3.3, Copyright (c) 1998-2010, by Zend Technologies with Suhosin v0.9.33, Copyright (c) 2007-2012, by SektionEins GmbH mysql Server version: 5.1.63-cll php -i disable_functions => apache_child_terminate, apache_setenv, define_syslog_variables, escapeshellarg, escapeshellcmd, eval, exec, fp, fput, ftp_connect, ftp_e xec, ftp_get, ftp_login, ftp_nb_fput, ftp_put, ftp_raw, ftp_rawlist, highlight_file, ini_alter, ini_get_all, ini_restore, inject_code, openlog, passthru, php _uname, phpAds_remoteInfo, phpAds_XmlRpc, phpAds_xmlrpcDecode, phpAds_xmlrpcEncode, popen, posix_getpwuid, posix_kill, posix_mkfifo, posix_setpgid, posix_set sid, posix_setuid, posix_setuid, posix_uname, proc_close, proc_get_status, proc_nice, proc_open, proc_terminate, shell_exec, syslog, system, xmlrpc_entity_de code, xmlrpc_server_create, putenv, show_source,mail => apache_child_terminate, apache_setenv, define_syslog_variables, escapeshellarg, escapeshellcmd, eval, exec, fp, fput, ftp_connect, ftp_exec, ftp_get, ftp_login, ftp_nb_fput, ftp_put, ftp_raw, ftp_rawlist, highlight_file, ini_alter, ini_get_all, ini_restore, inject_code, openlog, passthru, php_uname, phpAds_remoteInfo, phpAds_XmlRpc, phpAds_xmlrpcDecode, phpAds_xmlrpcEncode, popen, posix_getpwuid, posix_kill, pos ix_mkfifo, posix_setpgid, posix_setsid, posix_setuid, posix_setuid, posix_uname, proc_close, proc_get_status, proc_nice, proc_open, proc_terminate, shell_exe c, syslog, system, xmlrpc_entity_decode, xmlrpc_server_create, putenv, show_source,mail ... suhosin.executor.disable_eval => Off => Off suhosin.executor.eval.blacklist => include,include_once,require,require_once,curl_init,fpassthru,base64_encode,base64_decode,mail,exec,system,proc_open,leak, syslog,pfsockopen,shell_exec,ini_restore,symlink,stream_socket_server,proc_nice,popen,proc_get_status,dl, pcntl_exec, pcntl_fork, pcntl_signal,pcntl_waitpid, pcntl_wexitstatus, pcntl_wifexited, pcntl_wifsignaled,pcntl_wifstopped, pcntl_wstopsig, pcntl_wtermsig, socket_accept,socket_bind, socket_connect, socket_cr eate, socket_create_listen,socket_create_pair,link,register_shutdown_function,register_tick_function,gzinflate => include,include_once,require,require_once,c url_init,fpassthru,base64_encode,base64_decode,mail,exec,system,proc_open,leak,syslog,pfsockopen,shell_exec,ini_restore,symlink,stream_socket_server,proc_nic e,popen,proc_get_status,dl, pcntl_exec, pcntl_fork, pcntl_signal,pcntl_waitpid, pcntl_wexitstatus, pcntl_wifexited, pcntl_wifsignaled,pcntl_wifstopped, pcntl _wstopsig, pcntl_wtermsig, socket_accept,socket_bind, socket_connect, socket_create, socket_create_listen,socket_create_pair,link,register_shutdown_function, register_tick_function,gzinflate Sometimes i cannot kill httpd process. I run kill -9 PID even several times, and nothing happens. php runs via suphp. I learned somewhere that it can be trojan. I ran strace ps aux and it stops on open("/proc/PID/cmdline", O_RDONLY) If i reboot server, problem is gone but after some time it is back again .. :( Thanks.

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• Ubuntu Server 12.04 CPU Load

  - by zertux

  I have a Server (2x Hexa-Core Xeon E5649 2.53GHz w/HT with 32GB RAM and 20000 GB Bandwidth) running Ubuntu Server 12.04 LTS. The server runs LAMP and serves one website only, the estimated number of users is to be ~ 15,000 at the same time. At the moment i have around 2000 users online each of them runs 50 MySQL queries (small values mostly select and insert) from the beginning until the end of the session. Server CPU Load is high at this number of connections while the RAM usage is almost 1GB out of 32GB its worth mentioning that the server was running very fast with no problems at all but am concerned about the load average. http://s12.postimage.org/z7hi6mz3h/photo.png top - 03:02:43 up 9 min, 2 users, load average: 50.83, 30.14, 12.83 Tasks: 432 total, 1 running, 430 sleeping, 0 stopped, 1 zombie Cpu(s): 0.1%us, 0.2%sy, 0.0%ni, 66.5%id, 33.1%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 32939992k total, 3111604k used, 29828388k free, 84108k buffers Swap: 2048280k total, 0k used, 2048280k free, 1621640k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 2860 root 20 0 25820 2288 1420 S 3 0.0 0:11.18 htop 1182 root 20 0 0 0 0 D 2 0.0 0:01.46 kjournald 1935 mysql 20 0 12.3g 161m 7924 S 1 0.5 102:31.45 mysqld 11 root 20 0 0 0 0 S 0 0.0 0:00.38 kworker/0:1 1822 www-data 20 0 247m 25m 4188 D 0 0.1 0:01.81 apache2 2920 www-data 20 0 0 0 0 Z 0 0.0 0:01.20 apache2 <defunct> 2942 www-data 20 0 247m 23m 3056 D 0 0.1 0:00.20 apache2 3516 www-data 20 0 247m 23m 3028 D 0 0.1 0:00.06 apache2 3521 www-data 20 0 247m 23m 3020 D 0 0.1 0:00.09 apache2 3664 www-data 20 0 247m 23m 3132 D 0 0.1 0:00.09 apache2 3674 www-data 20 0 247m 23m 3252 D 0 0.1 0:00.06 apache2 3713 www-data 20 0 247m 23m 3040 D 0 0.1 0:00.09 apache2 1 root 20 0 24328 2284 1344 S 0 0.0 0:03.09 init 2 root 20 0 0 0 0 S 0 0.0 0:00.00 kthreadd 3 root 20 0 0 0 0 S 0 0.0 0:00.01 ksoftirqd/0 6 root RT 0 0 0 0 S 0 0.0 0:00.00 migration/0 7 root RT 0 0 0 0 S 0 0.0 0:00.00 watchdog/0 8 root RT 0 0 0 0 S 0 0.0 0:00.00 migration/1 9 root 20 0 0 0 0 S 0 0.0 0:00.00 kworker/1:0 root@server:~/codes# vmstat 1 procs -----------memory---------- ---swap-- -----io---- -system-- ----cpu---- r b swpd free buff cache si so bi bo in cs us sy id wa 19 0 0 29684012 86112 1689844 0 0 19 590 254 231 48 0 47 5 23 0 0 29704812 86128 1697672 0 0 4 320 11100 8121 77 1 22 0 33 0 0 29671044 86156 1705308 0 0 0 5440 13190 9140 95 1 4 0 33 3 0 29670088 86160 1706288 0 0 0 32932 12275 7297 99 0 1 0 35 0 0 29693456 86188 1710724 0 0 4 676 12701 7867 98 1 1 0 ^C I have not changed any of the default configurations that comes with Ubuntu. Is this load normal for such powerful server ? is there any optimization i can make to Apache/MySQL to minimize the load ? What do you recommend ?

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• load-causing processes disappearing from "top" ps -o pcpu shows bogus numbers

  - by Alec Matusis

  I administer a large number of servers, and I have this problem only with Ubuntu 10.04 LTS: I run a server under normal load (say load average 3.0 on an 8-core server). The "top" command shows processes taking certain % of CPU that cause this load average: say PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 11008 mysql 20 0 25.9g 22g 5496 S 67 76.0 643539:38 mysqld ps -o pcpu,pid -p11008 %CPU PID 53.1 11008 , everything is consistent. The all of the sudden, the process causing the load average disappears from "top", but the process continues to run normally (albeit with a slight performance decrease), and the system load average becomes somewhat higher. The output of ps -o pcpu becomes bogus: # ps -o pcpu,pid -p11008 %CPU PID 317910278 1587 This happened to at least 5 different severs (different brand new IBM System X hardware), each running different software: one httpd 2.2, one mysqld 5.1, and one Twisted Python TCP servers. Each time the kernel was between 2.6.32-32-server and 2.6.32-40-server. I updated some machines to 2.6.32-41-server, and it has not happened on those yet, but the bug is rare (once every 60 days or so). This is from an affected machine: top - 10:39:06 up 73 days, 17:57, 3 users, load average: 6.62, 5.60, 5.34 Tasks: 207 total, 2 running, 205 sleeping, 0 stopped, 0 zombie Cpu(s): 11.4%us, 18.0%sy, 0.0%ni, 66.3%id, 4.3%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 74341464k total, 71985004k used, 2356460k free, 236456k buffers Swap: 3906552k total, 328k used, 3906224k free, 24838212k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 805 root 20 0 0 0 0 S 3 0.0 1493:09 fct0-worker 982 root 20 0 0 0 0 S 1 0.0 111:35.05 fioa-data-groom 914 root 20 0 0 0 0 S 0 0.0 884:42.71 fct1-worker 1068 root 20 0 19364 1496 1060 R 0 0.0 0:00.02 top Nothing causing high load is showing on top, but I have two highly loaded mysqld instances on it, that suddenly show crazy %CPU: #ps -o pcpu,pid,cmd -p1587 %CPU PID CMD 317713124 1587 /nail/encap/mysql-5.1.60/libexec/mysqld and #ps -o pcpu,pid,cmd -p1624 %CPU PID CMD 2802 1624 /nail/encap/mysql-5.1.60/libexec/mysqld Here are the numbers from # cat /proc/1587/stat 1587 (mysqld) S 1212 1088 1088 0 -1 4202752 14307313 0 162 0 85773299069 4611685932654088833 0 0 20 0 52 0 3549 27255418880 5483524 18446744073709551615 4194304 11111617 140733749236976 140733749235984 8858659 0 552967 4102 26345 18446744073709551615 0 0 17 5 0 0 0 0 0 the 14th and 15th numbers according to man proc are supposed to be utime %lu Amount of time that this process has been scheduled in user mode, measured in clock ticks (divide by sysconf(_SC_CLK_TCK). This includes guest time, guest_time (time spent running a virtual CPU, see below), so that applications that are not aware of the guest time field do not lose that time from their calculations. stime %lu Amount of time that this process has been scheduled in kernel mode, measured in clock ticks (divide by sysconf(_SC_CLK_TCK). On a normal server, these numbers are advancing, every time I check the /proc/PID/stat. On a buggy server, these numbers are stuck at a ridiculously high value like 4611685932654088833, and it's not changing. Has anyone encountered this bug?

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• many unknow process name as "sudo"

  - by joaner

  my server free memoney is less and less, And many process COMMAND are"sudo" when use top and enter M. I don't understand root user need to use "sudo". I want to know the way these processes are generated ? Can I kill ? Tasks: 185 total, 1 running, 184 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 3967848k total, 3484196k used, 483652k free, 218532k buffers Swap: 4112376k total, 0k used, 4112376k free, 2932864k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 22219 mysql 20 0 582m 67m 5492 S 0.0 1.7 0:01.75 mysqld 22337 daemon 20 0 327m 31m 3440 S 0.0 0.8 0:01.58 httpd 22252 daemon 20 0 321m 26m 3416 S 0.0 0.7 0:01.25 httpd 22263 daemon 20 0 319m 23m 3396 S 0.0 0.6 0:00.71 httpd 22253 daemon 20 0 310m 18m 3444 S 0.0 0.5 0:00.69 httpd 22251 root 20 0 28392 12m 3640 S 0.0 0.3 0:00.09 httpd 2422 root 20 0 9192 3608 2184 S 0.0 0.1 0:00.32 ssh 13613 root 20 0 38220 3572 1044 S 0.0 0.1 0:22.31 rsyslogd 2423 root 20 0 11556 3420 2692 S 0.0 0.1 0:00.11 sshd 22570 root 20 0 11716 3408 2676 S 0.0 0.1 0:00.08 sshd 3351 root 20 0 10384 2540 2000 S 0.0 0.1 0:00.06 sudo 30870 root 20 0 10384 2528 2000 S 0.0 0.1 0:00.06 sudo 14356 dkim-mil 20 0 49664 2444 1468 S 0.0 0.1 0:03.91 dkim-filter 2085 root 20 0 10376 2344 1824 S 0.0 0.1 0:00.00 sudo 7741 root 20 0 10376 2344 1824 S 0.0 0.1 0:00.00 sudo 29838 root 20 0 10376 2344 1824 S 0.0 0.1 0:00.00 sudo 2006 root 20 0 10376 2340 1824 S 0.0 0.1 0:00.00 sudo 29747 root 20 0 10376 2340 1824 S 0.0 0.1 0:00.00 sudo 30602 root 20 0 10376 2340 1824 S 0.0 0.1 0:00.00 sudo 30935 root 20 0 10376 2340 1824 S 0.0 0.1 0:00.00 sudo 2259 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 2503 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 2515 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 7718 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 7745 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 29845 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30172 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30352 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30548 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30598 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30897 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo 30899 root 20 0 10376 2336 1824 S 0.0 0.1 0:00.00 sudo

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• Linux: find out what process is using all the RAM?

  - by Timur

  Before actually asking, just to be clear: yes, I know about disk cache, and no, it is not my case :) Sorry, for this preamble :) I'm using CentOS 5. Every application in the system is swapping heavily, and the system is very slow. When I do free -m, here is what I got: total used free shared buffers cached Mem: 3952 3929 22 0 1 18 -/+ buffers/cache: 3909 42 Swap: 16383 46 16337 So, I actually have only 42 Mb to use! As far as I understand, -/+ buffers/cache actually doesn't count the disk cache, so I indeed only have 42 Mb, right? I thought, I might be wrong, so I tried to switch off the disk caching and it had no effect - the picture remained the same. So, I decided to find out who is using all my RAM, and I used top for that. But, apparently, it reports that no process is using my RAM. The only process in my top is MySQL, but it is using 0.1% of RAM and 400Mb of swap. Same picture when I try to run other services or applications - all go in swap, top shows that MEM is not used (0.1% maximum for any process). top - 15:09:00 up 2:09, 2 users, load average: 0.02, 0.16, 0.11 Tasks: 112 total, 1 running, 111 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.0%sy, 0.0%ni,100.0%id, 0.0%wa, 0.0%hi, 0.0%si, 0.0%st Mem: 4046868k total, 4001368k used, 45500k free, 748k buffers Swap: 16777208k total, 68840k used, 16708368k free, 16632k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ SWAP COMMAND 3214 ntp 15 0 23412 5044 3916 S 0.0 0.1 0:00.00 17m ntpd 2319 root 5 -10 12648 4460 3184 S 0.0 0.1 0:00.00 8188 iscsid 2168 root RT 0 22120 3692 2848 S 0.0 0.1 0:00.00 17m multipathd 5113 mysql 18 0 474m 2356 856 S 0.0 0.1 0:00.11 472m mysqld 4106 root 34 19 251m 1944 1360 S 0.0 0.0 0:00.11 249m yum-updatesd 4109 root 15 0 90152 1904 1772 S 0.0 0.0 0:00.18 86m sshd 5175 root 15 0 90156 1896 1772 S 0.0 0.0 0:00.02 86m sshd Restart doesn't help, and, by they way is very slow, which I wouldn't normally expect on this machine (4 cores, 4Gb RAM, RAID1). So, with that - I'm pretty sure that this is not a disk cache, who is using the RAM, because normally it should have been reduced and let other processes to use RAM, rather then go to swap. So, finally, the question is - if someone has any ideas how to find out what process is actually using the memory so heavily?

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• Killing Stuck Child JVM's

  - by ACShorten

  Note: This facility only applies to Oracle Utilities Application Framework products using COBOL. In some situations, the Child JVM's may spin. This causes multiple startup/shutdown Child JVM messages to be displayed and recursive child JVM's to be initiated and shunned. If the following: Unable to establish connection on port …. after waiting .. seconds.The issue can be caused intermittently by CPU spins in connection to the creation of new processes, specifically Child JVMs. Recursive (or double) invocation of the System.exit call in the remote JVM may be caused by a Process.destroy call that the parent JVM always issues when shunning a JVM. The issue may happen when the thread in the parent JVM that is responsible for the recycling gets stuck and it affects all child JVMs. If this issue occurs at your site then there are a number of options to address the issue: Configure an Operating System level kill command to force the Child JVM to be shunned when it becomes stuck. Configure a Process.destroy command to be used if the kill command is not configured or desired. Specify a time tolerance to detect stuck threads before issuing the Process.destroy or kill commands. Note: This facility is also used when the Parent JVM is also shutdown to ensure no zombie Child JVM's exit. The following additional settings must be added to the spl.properties for the Business Application Server to use this facility: spl.runtime.cobol.remote.kill.command – Specify the command to kill the Child JVM process. This can be a command or specify a script to execute to provide additional information. The kill.command property can accept two arguments, {pid} and {jvmNumber}, in the specified string. The arguments must be enclosed in curly braces as shown here. Note: The PID will be appended to the killcmd string, unless the {pid} and {jvmNumber} arguments are specified. The jvmNumber can be useful if passed to a script for logging purposes. Note: If a script is used it must be in the path and be executable by the OS user running the system. spl.runtime.cobol.remote.destroy.enabled – Specify whether to use the Process.destroy command instead of the kill command. Specify true or false. Default value is false. Note: Unless otherwise required, it is recommended to use the kill command option if shunning JVM's is an issue. There this value can remain its default value, false, unless otherwise required. spl.runtime.cobol.remote.kill.delaysecs – Specify the number of seconds to wait for the Child JVM to terminate naturally before issuing the Process.destroy or kill commands. Default is 10 seconds. For example: spl.runtime.cobol.remote.kill.command=kill -9 {pid} {jvmNumber}spl.runtime.cobol.remote.destroy.enabled=falsespl.runtime.cobol.remote.kill.delaysecs=10 When a Child JVM is to be recycled, these properties are inspected and the spl.runtime.cobol.remote.kill.command, executed if provided. This is done after waiting for spl.runtime.cobol.remote.kill.delaysecs seconds to give the JVM time to shut itself down. The spl.runtime.cobol.remote.destroy.enabled property must be set to true AND the spl.runtime.cobol.remote.kill.command omitted for the original Process.destroy command to be used on the process. Note: By default the spl.runtime.cobol.remote.destroy enabled is set to false and is therefore disabled. If neither spl.runtime.cobol.remote.kill.command nor spl.runtime.cobol.remote.destroy.enabled is specified, child JVMs will not beforcibly killed. They will be left to shut themselves down (which may lead to orphan JVMs). If both are specified, the spl.runtime.cobol.remote.kill.command is preferred and spl.runtime.cobol.remote.destroy.enabled defaulted to false.It is recommended to invoke a script to issue the direct kill command instead of directly using the kill -9 commands.For example, the following sample script ensures that the process Id is an active cobjrun process before issuing the kill command: forcequit.sh #!/bin/shTHETIME=`date +"%Y-%m-%d %H:%M:%S"`if [ "$1" = "" ]then  echo "$THETIME: Process Id is required" >>$SPLSYSTEMLOGS/forcequit.log  exit 1fijavaexec=cobjrunps e $1 | grep -c $javaexecif [ $? = 0 ]then  echo "$THETIME: Process $1 is an active $javaexec process -- issuing kill-9 $1" >>$SPLSYSTEMLOGS/forcequit.log  kill -9 $1exit 0else  echo "$THETIME: Process id $1 is not a $javaexec process or not active --  kill will not be issued" >>$SPLSYSTEMLOGS/forcequit.logexit 1fi This script's name would then be specified as the value for the spl.runtime.cobol.remote.kill.command property, for example: spl.runtime.cobol.remote.kill.command=forcequit.sh The forcequit script does not have any explicit parameters but pid is passed automatically. To use the jvmNumber parameter it must explicitly specified in the command. For example, to call script forcequit.sh and pass it the pid and the child JVM number, specify it as follows: spl.runtime.cobol.remote.kill.command=forcequit.sh {pid} {jvmNumber} The script can then use the JVM number for logging purposes or to further ensure that the correct pid is being killed.If the arguments are omitted, the pid is automatically appended to the spl.runtime.cobol.remote.kill.command string. To use this facility the following patches must be installed: Patch 13719584 for Oracle Utilities Application Framework V2.1, Patches 13684595 and 13634933 for Oracle Utilities Application Framework V2.2 Group Fix 4 (as Patch 13640668) for Oracle Utilities Application Framework V4.1.

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• The Sound of Two Toilets Flushing: Constructive Criticism for Virgin Atlantic Complaints Department

  - by Geertjan

  I recently had the experience of flying from London to Johannesburg and back with Virgin Atlantic. The good news was that it was the cheapest flight available and that the take off and landing were absolutely perfect. Hence I really have no reason to complain. Instead, I'd like to offer some constructive criticism which hopefully Richard Branson will find sometime while googling his name. Or maybe someone from the Virgin Atlantic Complaints Department will find it, whatever, just want to put this information out there. Arrangement of restroom facilities. Maybe next time you design an airplane, consider not putting your toilets at a right angle right next to your rows of seats. Being able to reach, without even needing to stretch your arm, from your seat to close, yet again, a toilet door that someone, someone obviously sitting very far from the toilets, carelessly forgot to close is not an indicator of quality interior design. Have you noticed how all other airplanes have their toilets in a cubicle separated from the rows of seats? On those airplanes, people sitting in the seats near the toilets are not constantly being woken up throughout the night whenever someone enters/exits the toilet, whenever the light in the toilet is suddenly switched on, and whenever one of the toilets flushes. Bonus points for Virgin Atlantic passengers in the seats adjoining the toilets is when multiple toilets are flushed simultaneously and multiple passengers enter/exit them at the same time, a bit like an unasked for low budget musical of suddenly illuminated grumpy people in crumpled clothes. What joy that brings at 3 AM is hard to describe. Seats with extra leg room. You know how other airplanes have the seats with the extra leg room? You know what those seats tend to have? Extra leg room. It's really interesting how Virgin Atlantic's seats with extra leg room actually have no extra leg room at all. It should have been a give away, the fact that these special seats are found in the same rows as the standard seats, rather than on the cusp of real glory which is where most airlines put their extra leg room seats, with the only actual difference being that they have a slightly different color. Had you called them "seats with a different color" (i.e., almost not quite green, rather than something vaguely hinting at blue), at least I'd have known what I was getting. Picture the joy at 3 AM, rudely awakened from nightmarish slumber, partly grateful to have been released from a grayish dream of faceless zombies resembling one or two of those in a recent toilet line, by multiple adjoining toilets flushing simultaneously, while you're sitting in a seat with extra leg room that has exactly as much leg room as the seats in neighboring rows. You then have a choice of things to be sincerely annoyed about. Food from the '80's. In the '80's, airplane food came in soggy containers and even breakfast, the most important meal of the day, was a sad heap of vaguely gray colors. The culinary highlight tended to be a squashed tomato, which must have been mashed to a pulp with a brick prior to being regurgitated by a small furry animal, and there was also always a piece of immensely horrid pumpkin, as well as a slice of spongy something you'd never seen before. Sausages and mash at 6 AM on an airplane was always a heavy lump of horribleness. Thankfully, all airlines throughout the world changed from this puke inducing strategy around 1987 sometime. Not Virgin Atlantic, of course. The fatty sausages and mash are still there, bringing you flashbacks to Duran Duran, which is what you were listening to (on your walkman) the last time you saw it in an airplane. Even the golden oldie "squashed tomato attached by slime to three wet peas" is on the menu. How wonderful to have all this in a cramped seat with a long row of early morning bleariness lined up for the toilets, right at your side, bumping into your elbow, groggily, one by one, one after another, more and more, fumble-open-door-silence-flush-fumble-open-door, and on and on, while you tentatively push your fork through a soggy pile of colorless mush, fighting the urge to throw up on the stinky socks of whatever nightmarish zombie is bumping into your elbow at the time. But, then again, the plane landed without a hitch, in fact, extremely smoothly, so I'm certainly not blaming the pilots.

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• EXC_BAD_ACCESS error on a UITableView with ARC?

  - by Arnaud Drizard

  I am building a simple app with a custom bar tab which loads the content of the ViewController from a UITableView located in another ViewController. However, every time I try to scroll on the tableview, I get an exc_bad_access error. I enabled NSzombies and guard malloc to get more info on the issue. In the console I get: "message sent to deallocated instance 0x19182f20" and after profiling I get: # Address Category Event Type RefCt Timestamp Size Responsible Library Responsible Caller 56 0x19182f20 FirstTabBarViewController Zombie -1 00:16.613.309 0 UIKit -[UIScrollView(UIScrollViewInternal) _scrollViewWillBeginDragging] Here is a bit of the code of the ViewController in which the error occurs: .h file: #import <UIKit/UIKit.h> #import "DataController.h" @interface FirstTabBarViewController : UIViewController <UITableViewDelegate, UITableViewDataSource> { IBOutlet UITableView* tabBarTable; } @property (strong, nonatomic) IBOutlet UIView *mainView; @property (strong, nonatomic) IBOutlet UITableView *tabBarTable; @property (nonatomic, strong) DataController *messageDataController; @end .m file: #import "FirstTabBarViewController.h" #import "DataController.h" @interface FirstTabBarViewController () @end @implementation FirstTabBarViewController @synthesize tabBarTable=_tabBarTable; - (id)initWithNibName:(NSString *)nibNameOrNil bundle:(NSBundle *)nibBundleOrNil { self = [super initWithNibName:nibNameOrNil bundle:nibBundleOrNil]; if (self) { // Custom initialization } return self; } - (void)viewDidLoad { [super viewDidLoad]; } - (void)didReceiveMemoryWarning { [super didReceiveMemoryWarning]; // Dispose of any resources that can be recreated. } - (void)awakeFromNib { [super awakeFromNib]; self.messageDataController=[[DataController alloc] init]; } - (NSInteger)numberOfSectionsInTableView:(UITableView *)tableView { return 1; } - (NSInteger) tableView:(UITableView *)tableView numberOfRowsInSection:(NSInteger)section{ return [self.messageDataController countOfList]; } - (UITableViewCell *)tableView:(UITableView *)tableView cellForRowAtIndexPath:(NSIndexPath *)indexPath { static NSString *CellIdentifier = @"mainCell"; UITableViewCell *cell = [tableView dequeueReusableCellWithIdentifier:CellIdentifier]; if (cell == nil){ cell = [[UITableViewCell alloc] initWithStyle:UITableViewCellStyleDefault reuseIdentifier:CellIdentifier]; }; NSString *expenseAtIndex = [self.messageDataController objectInListAtIndex:indexPath.row]; [[cell textLabel] setText:expenseAtIndex]; return cell; } - (BOOL)tableView:(UITableView *)tableView canEditRowAtIndexPath:(NSIndexPath *)indexPath { // Return NO if you do not want the specified item to be editable. return NO; } @end This FirstTabBarViewController is loaded in the MainViewController with the following custom segue: #import "customTabBarSegue.h" #import "MainViewController.h" @implementation customTabBarSegue -(void) perform { MainViewController *src= (MainViewController *) [self sourceViewController]; UIViewController *dst=(UIViewController *)[self destinationViewController]; for (UIView *view in src.placeholderView.subviews){ [view removeFromSuperview]; } src.currentViewController =dst; [src.placeholderView addSubview:dst.view]; } @end The Datacontroller class is just a simple NSMutableArray containing strings. I am using ARC so I don't understand where the memory management error comes from. Does anybody have a clue? Any help much appreciated ;) Thanks!!

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• server|configuration problem, a php script just die with no error log & no reason

  - by Roberto

  Hi (first of all, thanks for your attention & sorry for my bad english hahaha also this is not a programming error, or thats what I think, I think this is an error in some configuration of the server or something else but I dont know what) I have a php script (is running like a process of linux, its not running on the web browser) that send SMS via SMPP on the port 2055 (using sockets in php) & then inserts like 10,000 rows into a dababase on MySQL, the script gets the data from a XML file; firts it was running in a shared server (Hostgator is our hosting provider) & at the begining it worked fine, with no trouble, but 5 months later an error appear, the process just die with no reason, the script only sent & inserted 700 rows in the table of the database & the process didnt show any warning or error, nothing appears in the error logs, & I didnt make any change in the script Hostgator never helped us hahaha so we decided to move the script from the shared server to a dedicated server; I thought it was a memory problem or something like that, but when we move the script to the dedicated server the problem just get worse, the script die when has just sent & inserted 40 to 50 rows to the database the information about this error: the shared server is on Red Hat 4.1.2-46 & the dedicated server is on CentOS 5.4 I have commented the line that sends the SMS, & the problem remains in the shared server, at the begining the script was fine, but then the script started to die when has just inserted 700 aprox. in the database, & now the script is dying when has inserted 2500 rows, its better but we didnt change anything in the dedicated server, the script dies when has just inserted like 40 row in the table the script, before it dies, change to a zombie process & we dont know why the usage of memory appears to be 0.3%, and of the cpu appears to be 0.7% to 1% I have changed the max memory limit of php to 128Mb, and even to -1 (so php wont have any limit) but the problem remains we have the limit of 50 connections of mysql at the same time, so I think this is not the problem Im using mysqli to connect from php to mysql Hostgator report that they haven't made any change or update in the servers what could be the problem?? what should I do??? what should I search??? is something in the logic Im missing?? what steps do I have to follow when managing & searching problems of process on Linux??? thank you very much, I think this is not a programming problem, but you have more experience than me, you can tell me thanks!!! bye!!! :)

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