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• How to extract a couple marked strings from a line (python)

  - by GoJian

  My Friends, I spent quite some time on this one... but cannot yet figure out a better way to do it. I am coding in python, by the way. So, here is a line of text in a file I am working with, for example: "ref|ZP_01631227.1| 3-dehydroquinate synthase [Nodularia spumigena CCY9414]..." How can I extract the two strings "ZP_01631227.1" and "Nodularia spumigena CCY9414" from the line? The pairs of "| |" and brackets are like markers so we know we want to get the strings in between the two... I guess I can probably loop over all the characters in the line and do it the hard way. It just takes so much time... Wondering if there is a python library or other smart ways to do it nicely? Thanks to all!

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• python: calling constructor from dictionary?

  - by Jason S

  I'm not quite sure of the terminology here so please bear with me.... Let's say I have a constructor call like this: machineSpecificEnvironment = Environment( TI_C28_ROOT = 'C:/appl/ti/ccs/4.1.1/ccsv4/tools/compiler/c2000', JSDB = 'c:/bin/jsdb/jsdb.exe', PYTHON_PATH = 'c:/appl/python/2.6.4', ) except I would like to replace that by an operation on a dictionary provided to me: keys = {'TI_C28_ROOT': 'C:/appl/ti/ccs/4.1.1/ccsv4/tools/compiler/c2000', 'JSDB': 'c:/bin/jsdb/jsdb.exe', 'PYTHON_PATH': 'c:/appl/python/2.6.4'} machineSpecificEnvironment = Environment( ... what do I put here? it needs to be a function of "keys" ... ) How can I do this?

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• "variable tracking" is eating my compile time!

  - by wowus

  I have an auto-generated file which looks something like this... static void do_SomeFunc1(void* parameter) { // Do stuff. } // Continues on for another 4000 functions... void dispatch(int id, void* parameter) { switch(id) { case ::SomeClass1::id: return do_SomeFunc1(parameter); case ::SomeClass2::id: return do_SomeFunc2(parameter); // This continues for the next 4000 cases... } } When I build it like this, the build time is enormous. If I inline all the functions automagically into their respective cases using my script, the build time is cut in half. GCC 4.5.0 says ~50% of the build time is being taken up by "variable tracking" when I use -ftime-report. What does this mean and how can I speed compilation while still maintaining the superior cache locality of pulling out the functions from the switch? EDIT: Interestingly enough, the build time has exploded only on debug builds, as per the following profiling information of the whole project (which isn't just the file in question, but still a good metric; the file in question takes the most time to build): Debug: 8 minutes 50 seconds Release: 4 minutes, 25 seconds

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• Alternative to nesting for loops in Python

  - by davenz

  I've read that one of the key beliefs of Python is that flat nested. However, if I have several variables counting up, what is the alternative to multiple for loops? My code is for counting grid sums and goes as follows: def horizontal(): for x in range(20): for y in range(17): temp = grid[x][y: y + 4] sum = 1 for n in temp: sum += int(n) return sum This seems to me like it is too heavily nested. Firstly, what is considered to many nested loops in Python ( I have certainly seen 2 nested loops before). Secondly, if this is too heavily nested, what is an alternative way to write this code?

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• python: check if url to jpg exists

  - by user257543

  In python, how would I check if a url ending in .jpg exists? ex: http://www.fakedomain.com/fakeImage.jpg thanks

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• proxy-like python module

  - by Uszy Wieloryba

  Can a python module hand over other module in case of self being imported?

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• Python, implementing proxy support for a socket based application (not urllib2)

  - by Terry Felkrow

  Hey guys, I am little stumped: I have a simple messenger client program (pure python, sockets), and I wanted to add proxy support (http/s, socks), however I am a little confused on how to go about it. I am assuming that the connection on the socket level will be done to the proxy server, at which point the headers should contain a CONNECT + destination IP (of the chat server) and authentication, (if proxy requires so), however the rest is a little beyond me. How is the subsequent connection handled, specifically the reading/writing, etc... Are there any guides on proxy support implementation for socket based (tcp) programming in Python? Thank you

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• [C++] Real time plotting/data logging

  - by Paul

  I'm going to write a program that plots data from a sensor connected to the computer. The sensor value is going to be plotted as a function of the time (sensor value on the y-axis, time on the x-axis). I want to be able to add new values to the plot in real time. What would be best to do this with in C++? Edit: And by the way, the program will be running on a Linux machine

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• Integrate Python Projects Into Xcode

  - by Vynile

  Hi! I'm a Mac user, and one of my hobbies is programming. I use Xcode, the integrated IDE of Mac OS X. I started to learn Python programming langage, and I want to use Xcode for developing my scripts. I searched for weeks in the internet, but I didn't find something interesting. Firstly, I want to update the integrated interpreter of Mac OS X, that is on 2.6 version. And secondly, I want to create a Python project on Xcode easily, like I do with C & C++ projects. Can you help me? I really need help! Cordially.

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• Doxygen C++ comment string parser in python?

  - by Sebastian

  Does anybody know of a python module to parse a doxygen style C++ comment string? I mean a string like this (simple example): /** * A constructor. * A more elaborate description of the constructor. * @param param1 test1 * @param param2 test2 */ and I would like to extract the brief, the long description, the parameters, the return value etc. I'm currently doing this using string methods and regular expressions but my solution is not very robust. Alternatively can anybody recommend an easy to use python parser lib that I can set up quickly? Thanks in advance

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• Convert Google results object (pure js) to Python object

  - by colwilson

  So I'm trying to use Google Map suggest API to request place name suggestions. Unfortunately I can't find the docs for this bit. Here is an example URI: http://maps.google.com/maps/suggest?q=lon&cp=3&ll=55.0,-3.5&spn=11.9,1.2&hl=en&gl=uk&v=2 which returns: {suggestion:[{query:"London",... I want to use this in python (2.5). Now in proper JSON there would have been quotations around the keys like so: {"suggestion":[{"query":"London",... and I could have used simplejson or something, but as it is I'm a bit stuck. There are two possible solutions here; either I can get to the API code and find an option to return proper JSON, or I do that in python. Any ideas please.

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• Creating Instance of Python Extension Type in C

  - by Brad Zeis

  I am writing a simple Vector implementation as a Python extension module in C that looks mostly like this: typedef struct { PyObject_HEAD double x; double y; } Vector; static PyTypeObject Vector_Type = { ... }; It is very simple to create instances of Vector while calling from Python, but I need to create a Vector instance in the same extension module. I looked in the documentation but I couldn't find a clear answer. What's the best way to do this?

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• Embedding Python in C: Having problems importin local modules

  - by Drew

  I'm needing to run Python scripts within a C-based app. I am able to import standard modules from the Python libraries i.e.: PyRun_SimpleString("import sys") But when I try to import a local module 'can' PyRun_SimpleString("import can") returns the error msg: Traceback (most recent call last): File "", line 1, in ImportError: No module named can When I type the command "import can" in iPython, the system is able to find it. How can I link my app with can? I've tried setting PYTHONPATH to my working directory. Thanks.

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• Python IPC, popen too slow

  - by UnableToLoad

  i need to run a subprocess (./myProgram) form python script and get output, actually i do this: import subprocess proc = subprocess.Popen('./generate_out', shell=False, stdout=subprocess.PIPE, ) while proc.poll() is None: out = proc.stdout.readline() data = doStuff(out) print(data) but is slow, sometimes pass a lot of time between the output produced by ./generate_out and the print(data), knowing that my doStuff() function is very fast, i think there is some buffer slowing down my pipe... Notes: ./generate_out, generates potentially an unlimited number of lines of finite length each. It seems that when too few chars are put in the pipe between the two processes nothing happens, then when enough is produced i get a huge print (non the expected behaviour!) sometimes i wait many seconds (10-20 and more) between generate_out print and python print) what can i do? maybe communicate() is faster? anithing else? Thank you a lot!

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• Python Reporting Frameworks

  - by RizwanK

  Does anyone have/know of a Python Reporting Framework along the lines of what something like DynamicReports does?

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• Is there are standard way to store a database schema outside a python app

  - by acrosman

  I am working on a small database application in Python (currently targeting 2.5 and 2.6) using sqlite3. It would be helpful to be able to provide a series of functions that could setup the database and validate that it matches the current schema. Before I reinvent the wheel, I thought I'd look around for libraries that would provide something similar. I'd love to have something akin to RoR's migrations. xml2ddl doesn't appear to be meant as a library (although it could be used that way), and more importantly doesn't support sqlite3. I'm also worried about the need to move to Python 3 one day given the lack of recent attention to xml2ddl. Are there other tools around that people are using to handle this?

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• [SOLVED]Port C's fread(&struct,....) to Python

  - by user287669

  Hey, I'm really struggling with this one. I'am trying to port a small piece of someone else's code to Python and this is what I have: typedef struct { uint8_t Y[LUMA_HEIGHT][LUMA_WIDTH]; uint8_t Cb[CHROMA_HEIGHT][CHROMA_WIDTH]; uint8_t Cr[CHROMA_HEIGHT][CHROMA_WIDTH]; } __attribute__((__packed__)) frame_t; frame_t frame; while (! feof(stdin)) { fread(&frame, 1, sizeof(frame), stdin); // DO SOME STUFF } Later I need to access the data like so: frame.Y[x][y] So I made a Class 'frame' in Python and inserted the corresponding variables(frame.Y, frame.Cb, frame.Cr). I have tried to sequentially map the data from Y[0][0] to Cr[MAX][MAX], even printed out the C struct in action but didn't manage to wrap my head around the method used to put the data in there. I've been struggling overnight with this and have to get back to the army tonight, so any immediate help is very welcome and appreciated. Thanks

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• how to load a module within python debugger

  - by MK

  This looks like something simple but I could not find the answer so far - I have just learnt python and need to start learning pdb. In my module I have the usual if __name__ == __main_ trick to execute some code when the module is run as a program. So far I have been running it via python -m mymod arg1 arg2 syntax Now I want to do exactly the same thing from inside pdb. Normally in C, I would just do gdb mybinary followed by run arg1 arg2 But I cannot figure out how to achieve the same thing in pdb. I am sure there has to be a simple way to achieve this but it is taking me too long to search for it.. Thanks for your help!

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• Ruby - Manipulating Time/DateTime by the Hour/Day?

  - by viatropos

  Where can I find some examples on how to manipulate the time objects by days/hours/etc? I would like to do this: time.now_by_hour #=> "Tue Jun 15 23 MST 2010" time.now_by_day #=> ""Tue Jun 15 MST 2010" time.now_by_hour - 4.weeks - 3.days #=> "Sat May 15 MST 2010" What is the recommended order of operations? The reason for this is I would like to run through lists of times and sort them by date to the hour, not to the minute and second.

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• Calculate the SUM of the Column which has Time DataType:

  - by thevan

  I want to calculate the Sum of the Field which has Time DataType. My Table is Below: TableA: TotalTime ------------- 12:18:00 12:18:00 Here I want to sum the two time fields. I tried the below Query SELECT CAST( DATEADD(MS, SUM(DATEDIFF(MS, '00:00:00.000', CONVERT(TIME, TotalTime))), '00:00:00.000' ) AS TOTALTIME) FROM [TableA] But it gives the Output as TOTALTIME ----------------- 00:36:00.0000000 But My Desired Output would be like below: TOTALTIME ----------------- 24:36:00 How to get this Output?

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• C++: How would I get unix time?

  - by John D.

  I need a function or way to get the UNIX epoch in seconds, much like how I can in PHP using the time function. I can't find any method except the time() in ctime which seems to only output a formatted date, or the clock() function which has seconds but seems to always be a multiple of 1 million, nothing with any resolution. I wish to measure execution time in a program, I just wanted to calculate the diff between start and end; how would a C++ programmer do this? EDIT: time() and difftime only allow resolution by seconds, not ms or anything too btw.

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• how can I select data from MySQL based on date (unix time record)

  - by bn

  I have a record of data with unix time date in it i want to select the row based on the date/month/year only (not with time) currently Im using something like this select * from tablename where date > '$today' and date < '$tomorow' LIMIT 1; how ever this is not that accurate if the $today and $tomorrow have different time (but same date) is there any better way to do this?

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• Python in AWS Elastic Beasntalk: Private package dependencies

  - by Adam Matan

  I would like to deploy a Python Flask application on beanstalk. The application depends on external packages (e.g. geopy) and internal packages (e.g. adam_geography). The manual Create a requirements.txt file and place it in the top-level directory of your source bundle. This would probably fetch geopy and its dependencies, but would not fetch adam_geography which is available from a custom repo inside my VPC. How do I specify/upload private, internal Python package dependencies in a Beanstalk application?

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• Implementation Details as a "Document" ( In generic terms) - Python, C++

  - by mgj

  Hi..:) For documentation and presentation purposes, we often find professionals/students creating SRS, coding guidelines etc. for these things there is some kind of a checklist which one could use to appropriately match what could relate to a specific case and accordingly one does a documentation for each. On those grounds could you please give me some sort of a checklist( any points/guidelines) one could use for going about Implementation( in the form of Implementation Details) in Python and C++ . Although this might sound specific as the query is "Implementation Details" and is different for different cases as one goes about the REAL implementation, I just want a SET of guidelines one should follow ( Preferably In Python, C++ specific, even for any other language is Welcome) if this( Implementation Details ) has to also be documented or presented. Hope the question is clear, I am sorry if it still sounds ambiguous, I guess this is the best I could do to frame my query. Thank you for your time...:)

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• Installing mySQL on mac for use with python

  - by Paul Patterson

  I am aware that there are umpteen similar questions here, and on other forums, but none of them have been able to help me. I simply want to install mySQL on my mac (running snow leopard 10.6.5) for use with Python. So far I have: 1) downloaded and installed [mysql-5.5.8-osx10.6-x86_64.dmg] (I have also accidentally downloaded and installed [mysql-5.1.54-osx10.6-x86_64.dmg]) 2) downloaded and installed [mySQL-python-1.2.3] 3) added the following to my .bash_profile: [export PATH=$PATH:/usr/local/mysql/bin] but when i run:import mySQLdb in terminal I am met with the following message: Traceback (most recent call last): File "<stdin>", line 1, in <module> ImportError: No module named mySQLdb Can anyone help?

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