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• Mysql performance problem & Failed DIMM

  - by murdoch

  Hi I have a dedicated mysql database server which has been having some performance problems recently, under normal load the server will be running fine, then suddenly out of the blue the performance will fall off a cliff. The server isn't using the swap file and there is 12GB of RAM in the server, more than enough for its needs. After contacting my hosting comapnies support they have discovered that there is a failed 2GB DIMM in the server and have scheduled to replace it tomorow morning. My question is could a failed DIMM result in the performance problems I am seeing or is this just coincidence? My worry is that they will replace the ram tomorrow but the problems will persist and I will still be lost of explanations so I am just trying to think ahead. The reason I ask is that there is plenty of RAM in the server, more than required and simply missing 2GB should be a problem, so if this failed DIMM is causing these performance problems then the OS must be trying to access the failed DIMM and slowing down as a result. Does that sound like a credible explanation? This is what DELLs omreport program says about the RAM, notice one dimm is "Critical" Memory Information Health : Critical Memory Operating Mode Fail Over State : Inactive Memory Operating Mode Configuration : Optimizer Attributes of Memory Array(s) Attributes : Location Memory Array 1 : System Board or Motherboard Attributes : Use Memory Array 1 : System Memory Attributes : Installed Capacity Memory Array 1 : 12288 MB Attributes : Maximum Capacity Memory Array 1 : 196608 MB Attributes : Slots Available Memory Array 1 : 18 Attributes : Slots Used Memory Array 1 : 6 Attributes : ECC Type Memory Array 1 : Multibit ECC Total of Memory Array(s) Attributes : Total Installed Capacity Value : 12288 MB Attributes : Total Installed Capacity Available to the OS Value : 12004 MB Attributes : Total Maximum Capacity Value : 196608 MB Details of Memory Array 1 Index : 0 Status : Ok Connector Name : DIMM_A1 Type : DDR3-Registered Size : 2048 MB Index : 1 Status : Ok Connector Name : DIMM_A2 Type : DDR3-Registered Size : 2048 MB Index : 2 Status : Ok Connector Name : DIMM_A3 Type : DDR3-Registered Size : 2048 MB Index : 3 Status : Critical Connector Name : DIMM_B1 Type : DDR3-Registered Size : 2048 MB Index : 4 Status : Ok Connector Name : DIMM_B2 Type : DDR3-Registered Size : 2048 MB Index : 5 Status : Ok Connector Name : DIMM_B3 Type : DDR3-Registered Size : 2048 MB the command free -m shows this, the server seems to be using more than 10GB of ram which would suggest it is trying to use the DIMM total used free shared buffers cached Mem: 12004 10766 1238 0 384 4809 -/+ buffers/cache: 5572 6432 Swap: 2047 0 2047 iostat output while problem is occuring avg-cpu: %user %nice %system %iowait %steal %idle 52.82 0.00 11.01 0.00 0.00 36.17 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 47.00 0.00 576.00 0 576 sda1 0.00 0.00 0.00 0 0 sda2 1.00 0.00 32.00 0 32 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 46.00 0.00 544.00 0 544 avg-cpu: %user %nice %system %iowait %steal %idle 53.12 0.00 7.81 0.00 0.00 39.06 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 49.00 0.00 592.00 0 592 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 49.00 0.00 592.00 0 592 avg-cpu: %user %nice %system %iowait %steal %idle 56.09 0.00 7.43 0.37 0.00 36.10 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 232.00 0.00 64520.00 0 64520 sda1 0.00 0.00 0.00 0 0 sda2 159.00 0.00 63728.00 0 63728 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 73.00 0.00 792.00 0 792 avg-cpu: %user %nice %system %iowait %steal %idle 52.18 0.00 9.24 0.06 0.00 38.51 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 49.00 0.00 600.00 0 600 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 49.00 0.00 600.00 0 600 avg-cpu: %user %nice %system %iowait %steal %idle 54.82 0.00 8.64 0.00 0.00 36.55 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 100.00 0.00 2168.00 0 2168 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 100.00 0.00 2168.00 0 2168 avg-cpu: %user %nice %system %iowait %steal %idle 54.78 0.00 6.75 0.00 0.00 38.48 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 84.00 0.00 896.00 0 896 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 84.00 0.00 896.00 0 896 avg-cpu: %user %nice %system %iowait %steal %idle 54.34 0.00 7.31 0.00 0.00 38.35 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 81.00 0.00 840.00 0 840 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 81.00 0.00 840.00 0 840 avg-cpu: %user %nice %system %iowait %steal %idle 55.18 0.00 5.81 0.44 0.00 38.58 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 317.00 0.00 105632.00 0 105632 sda1 0.00 0.00 0.00 0 0 sda2 224.00 0.00 104672.00 0 104672 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 93.00 0.00 960.00 0 960 avg-cpu: %user %nice %system %iowait %steal %idle 55.38 0.00 7.63 0.00 0.00 36.98 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 74.00 0.00 800.00 0 800 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 74.00 0.00 800.00 0 800 avg-cpu: %user %nice %system %iowait %steal %idle 56.43 0.00 7.80 0.00 0.00 35.77 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 72.00 0.00 784.00 0 784 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 72.00 0.00 784.00 0 784 avg-cpu: %user %nice %system %iowait %steal %idle 54.87 0.00 6.49 0.00 0.00 38.64 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 80.20 0.00 855.45 0 864 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 80.20 0.00 855.45 0 864 avg-cpu: %user %nice %system %iowait %steal %idle 57.22 0.00 5.69 0.00 0.00 37.09 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 33.00 0.00 432.00 0 432 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 33.00 0.00 432.00 0 432 avg-cpu: %user %nice %system %iowait %steal %idle 56.03 0.00 7.93 0.00 0.00 36.04 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 41.00 0.00 560.00 0 560 sda1 0.00 0.00 0.00 0 0 sda2 2.00 0.00 88.00 0 88 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 39.00 0.00 472.00 0 472 avg-cpu: %user %nice %system %iowait %steal %idle 55.78 0.00 5.13 0.00 0.00 39.09 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 29.00 0.00 392.00 0 392 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 29.00 0.00 392.00 0 392 avg-cpu: %user %nice %system %iowait %steal %idle 53.68 0.00 8.30 0.06 0.00 37.95 Device: tps Blk_read/s Blk_wrtn/s Blk_read Blk_wrtn sda 78.00 0.00 4280.00 0 4280 sda1 0.00 0.00 0.00 0 0 sda2 0.00 0.00 0.00 0 0 sda3 0.00 0.00 0.00 0 0 sda4 0.00 0.00 0.00 0 0 sda5 78.00 0.00 4280.00 0 4280

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• jQuery tools modal overlay display problem in IE6-8

  - by Michael Stone

  I'm trying to enable the overlay to be modal. It works perfectly fine in FireFox, but the window object is behind the mask when it becomes modal. This prevents any interaction with it and the page is actually useless. I've tried debugging this for a while and can't figure it out. Here is a link to the example on their site: http://flowplayer.org/tools/demos/overlay/modal-dialog.html $.fn.cfwindow = function(btnEvent,modal,draggable){ //error checking if(btnEvent == ""){ alert('Error in window :\n Please provide an id that instantiates the window. '); } if(!modal && !draggable){ $('#'+btnEvent+'[rel]').overlay(); $('#content_overlay').css('cursor','default'); } if(!modal && draggable){ $('#'+btnEvent+'[rel]').overlay(); $('#content_overlay').css('cursor','move'); $('#custom').draggable(); } if(modal){ $('#'+btnEvent+'[rel]').overlay({ // some mask tweaks suitable for modal dialogs mask: { color: '#646464', loadSpeed: 200, opacity: 0.6 }, closeOnClick: false }); $('#content_overlay').css('cursor','default'); //$('#custom').addClass('modal'); } }; That's what I'm referencing when I call through: <script type="text/javascript"> $(document).ready(function(){ $(document).pngFix(); var modal = <cfoutput>#attributes.modal#; var drag = #attributes.draggable#; var btn = '#attributes.selector#'; var src = '#attributes.source#'; var wid = '#attributes.width#'; $('##custom').width(parseInt(wid)); $('div##load_content').load(src); $('##custom').cfwindow(btn,modal,drag,wid); }); </script> CSS for the modal: <style type="text/css"> .modal { display:none; text-align:left; background-color:#FFFFFF; -moz-border-radius:6px; -webkit-border-radius:6px; } </style> Exclude the and the additional pound signs, IE. "##". Screen shot of the problem: http://twitpic.com/1tak06 Note: IE6 and IE8 have the same problem. Any help would be appreciated.

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• Query to find tables modified in the last hour

  - by oalo

  I want to find out which tables have been modified in the last hour in a MySQL database. How can I do this? I am new to MySQL so please try to explain it as simply as you can. thank you!

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• IP address numbers in MySQL subquery

  - by Iain Collins

  I have a problem with a subquery involving IPV4 addresses stored in MySQL (MySQL 5.0). The IP addresses are stored in two tables, both in network number format - e.g. the format output by MySQL's INET_ATON(). The first table ('events') contains lots of rows with IP addresses associated with them, the second table ('network_providers') contains a list of provider information for given netblocks. events table (~4,000,000 rows): event_id (int) event_name (varchar) ip_address (unsigned 4 byte int) network_providers table (~60,000 rows): ip_start (unsigned 4 byte int) ip_end (unsigned 4 byte int) provider_name (varchar) Simplified for the purposes of the problem I'm having, the goal is to create an export along the lines of: event_id,event_name,ip_address,provider_name If do a query along the lines of either of the following, I get the result I expect: SELECT provider_name FROM network_providers WHERE INET_ATON('192.168.0.1') >= network_providers.ip_start ORDER BY network_providers.ip_start DESC LIMIT 1 SELECT provider_name FROM network_providers WHERE 3232235521 >= network_providers.ip_start ORDER BY network_providers.ip_start DESC LIMIT 1 That is to say, it returns the correct provider_name for whatever IP I look up (of course I'm not really using 192.168.0.1 in my queries). However, when performing this same query as a subquery, in the following manner, it doesn't yield the result I would expect: SELECT event.id, event.event_name, (SELECT provider_name FROM network_providers WHERE event.ip_address >= network_providers.ip_start ORDER BY network_providers.ip_start DESC LIMIT 1) as provider FROM events Instead the a different (incorrect) value for network_provider is returned - over 90% (but curiously not all) values returned in the provider column contain the wrong provider information for that IP. Using event.ip_address in a subquery just to echo out the value confirms it contains the value I'd expect and that the subquery can parse it. Replacing event.ip_address with an actual network number also works, just using it dynamically in the subquery in this manner that doesn't work for me. I suspect the problem is there is something fundamental and important about subqueries in MySQL that I don't get. I've worked with IP addresses like this in MySQL quite a bit before, but haven't previously done lookups for them using a subquery. The question: I'd really appreciate an example of how I could get the output I want, and if someone here knows, some enlightenment as to why what I'm doing doesn't work so I can avoid making this mistake again. Notes: The actual real-world usage I'm trying to do is considerably more complicated (involving joining two or three tables). This is a simplified version, to avoid overly complicating the question. Additionally, I know I'm not using a between on ip_start & ip_end - that's intentional (the DB's can be out of date, and such cases the owner in the DB is almost always in the next specified range and 'best guess' is fine in this context) however I'm grateful for any suggestions for improvement that relate to the question. Efficiency is always nice, but in this case absolutely not essential - any help appreciated.

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• How can I write full search index query which will not consider any stopwords?

  - by Avinash

  I have written a query which will perform Full Text search using full search Index in mysql Table. But my problem is that when user searches with "to go" then it will not search anything because of stopwords in mysql. So my question is, how can I write a Full Search query which will ignore the stopwords?

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• Does the order of columns in a query matter?

  - by James Simpson

  When selecting columns from a MySQL table, is performance affected by the order that you select the columns as compared to their order in the table (not considering indexes that may cover the columns)? For example, you have a table with rows uid, name, bday, and you have the following query. SELECT uid, name, bday FROM table Does MySQL see the following query any differently and thus cause any sort of performance hit? SELECT uid, bday, name FROM table

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• Values of generated column not appearing in table

  - by msh210

  I'm using mysql version 5.1.41-3ubuntu12.10 (Ubuntu). mysql> show create table tt\G *************************** 1. row *************************** Table: tt Create Table: CREATE TABLE `tt` ( `pz` int(8) DEFAULT NULL, `os` varchar(8) DEFAULT NULL, `uz` int(11) NOT NULL, `p` bigint(21) NOT NULL DEFAULT '0', `c` decimal(23,0) DEFAULT NULL, KEY `pz` (`pz`), KEY `uz` (`uz`), KEY `os` (`os`), KEY `pz_2` (`pz`,`uz`) ) ENGINE=MyISAM DEFAULT CHARSET=latin1 1 row in set (0.00 sec) mysql> select pz,uz,pz*uz, -> if(pz*uz,1,.5), -> left(pz,2) pl,left(lpad(uz,5,0),2) ul, -> p from tt limit 10; +-------+----+-------+----------------+--------+----+--------+ | pz | uz | pz*uz | if(pz*uz,1,.5) | pl | ul | p | +-------+----+-------+----------------+--------+----+--------+ | NULL | 0 | NULL | 0.5 | NULL | 00 | 4080 | | NULL | 0 | NULL | 0.5 | NULL | 00 | 323754 | | 89101 | 0 | 0 | 0.5 | 89 | 00 | 6880 | | 0 | 0 | 0 | 0.5 | 0 | 00 | 11591 | | 89110 | 0 | 0 | 0.5 | 89 | 00 | 72 | | 78247 | 0 | 0 | 0.5 | 78 | 00 | 27 | | 90062 | 0 | 0 | 0.5 | 90 | 00 | 5 | | 63107 | 0 | 0 | 0.5 | 63 | 00 | 4 | | NULL | 0 | NULL | 0.5 | NULL | 00 | 54561 | | 94102 | 0 | 0 | 0.5 | 94 | 00 | 12499 | +-------+----+-------+----------------+--------+----+--------+ So far so good. As you see, 0.5 appears as a value of if(pz*uz,1,.5). The problem is: mysql> select os, -> if(pz*uz,left(pz,2)<=>left(lpad(uz,5,0),2),.5) uptwo, -> if(pz*uz,left(pz,3)<=>left(lpad(uz,5,0),3),.5) upthree, -> sum(p) p,sum(c) c -> from tt t -> group by os,uptwo,upthree order by null; +----+-------+---------+---------+-------+ | os | uptwo | upthree | p | c | +----+-------+---------+---------+-------+ | u | 1 | 1 | 52852 | 318 | | i | 1 | 1 | 7046563 | 21716 | | m | 1 | 1 | 1252166 | 7337 | | i | 0 | 0 | 1830284 | 4033 | | m | 0 | 0 | 294612 | 1714 | | i | 1 | 0 | 911486 | 3560 | | m | 1 | 0 | 145182 | 1136 | | u | 0 | 0 | 12144 | 23 | | u | 1 | 0 | 1571 | 8 | +----+-------+---------+---------+-------+ Although I group by uptwo, 0.5 doesn't appear in that column. What happened to the 0.5 values? Edit: As noted in the comments to Todd Gibson's answer, I also tried it with if(pz*uz,cast(left(pz,2)<=>left(lpad(uz,5,0),2) as decimal),.5) instead of if(pz*uz,left(pz,2)<=>left(lpad(uz,5,0),2),.5), but it, too, didn't work.

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• MySQL 5.5 (Percona) assertion failure log.. what would cause this?

  - by Tom Geee

  256GB, 64 Core , AMD running Ubuntu 12.04 with Percona MySQL 5.5.28. Below is the assertion failure. We just had a second assertion failure (different "in file", position, etc) while running a large set of inserts. After the first failure, MySQL restarted after a reboot only - after continuously looping on the same error after trying to recover. I decided to do a mysqlcheck with -o for optimize. Since these are all Innodb tables (very large tables, 60+GB) this would do an alter table on all tables. In the middle of this , the below assertion failure happened again: 121115 22:30:31 InnoDB: Assertion failure in thread 140086589445888 in file btr0pcur.c line 452 InnoDB: Failing assertion: btr_page_get_prev(next_page, mtr) == buf_block_get_page_no(btr_pcur_get_block(cursor)) InnoDB: We intentionally generate a memory trap. InnoDB: Submit a detailed bug report to http://bugs.mysql.com. InnoDB: If you get repeated assertion failures or crashes, even InnoDB: immediately after the mysqld startup, there may be InnoDB: corruption in the InnoDB tablespace. Please refer to InnoDB: http://dev.mysql.com/doc/refman/5.5/en/forcing-innodb-recovery.html InnoDB: about forcing recovery. 03:30:31 UTC - mysqld got signal 6 ; This could be because you hit a bug. It is also possible that this binary or one of the libraries it was linked against is corrupt, improperly built, or misconfigured. This error can also be caused by malfunctioning hardware. We will try our best to scrape up some info that will hopefully help diagnose the problem, but since we have already crashed, something is definitely wrong and this may fail. Please help us make Percona Server better by reporting any bugs at http://bugs.percona.com/ key_buffer_size=536870912 read_buffer_size=131072 max_used_connections=404 max_threads=500 thread_count=90 connection_count=90 It is possible that mysqld could use up to key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 1618416 K bytes of memory Hope that's ok; if not, decrease some variables in the equation. Thread pointer: 0x14edeb710 Attempting backtrace. You can use the following information to find out where mysqld died. If you see no messages after this, something went terribly wrong... stack_bottom = 7f687366ce80 thread_stack 0x30000 /usr/sbin/mysqld(my_print_stacktrace+0x2e)[0x7b52ee] /usr/sbin/mysqld(handle_fatal_signal+0x484)[0x68f024] /lib/x86_64-linux-gnu/libpthread.so.0(+0xfcb0)[0x7f9cbb23fcb0] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x35)[0x7f9cbaea6425] /lib/x86_64-linux-gnu/libc.so.6(abort+0x17b)[0x7f9cbaea9b8b] /usr/sbin/mysqld[0x858463] /usr/sbin/mysqld[0x804513] /usr/sbin/mysqld[0x808432] /usr/sbin/mysqld[0x7db8bf] /usr/sbin/mysqld(_Z13rr_sequentialP11READ_RECORD+0x1d)[0x755aed] /usr/sbin/mysqld(_Z17mysql_alter_tableP3THDPcS1_P24st_ha_create_informationP10TABLE_LISTP10Alter_infojP8st_orderb+0x216b)[0x60399b] /usr/sbin/mysqld(_Z20mysql_recreate_tableP3THDP10TABLE_LIST+0x166)[0x604bd6] /usr/sbin/mysqld[0x647da1] /usr/sbin/mysqld(_ZN24Optimize_table_statement7executeEP3THD+0xde)[0x64891e] /usr/sbin/mysqld(_Z21mysql_execute_commandP3THD+0x1168)[0x59b558] /usr/sbin/mysqld(_Z11mysql_parseP3THDPcjP12Parser_state+0x30c)[0x5a132c] /usr/sbin/mysqld(_Z16dispatch_command19enum_server_commandP3THDPcj+0x1620)[0x5a2a00] /usr/sbin/mysqld(_Z24do_handle_one_connectionP3THD+0x14f)[0x63ce6f] /usr/sbin/mysqld(handle_one_connection+0x51)[0x63cf31] /lib/x86_64-linux-gnu/libpthread.so.0(+0x7e9a)[0x7f9cbb237e9a] /lib/x86_64-linux-gnu/libc.so.6(clone+0x6d)[0x7f9cbaf63cbd] Trying to get some variables. Some pointers may be invalid and cause the dump to abort. Query (7f6300004b60): is an invalid pointer Connection ID (thread ID): 876 Status: NOT_KILLED You may download the Percona Server operations manual by visiting http://www.percona.com/software/percona-server/. You may find information in the manual which will help you identify the cause of the crash. 121115 22:31:07 [Note] Plugin 'FEDERATED' is disabled. 121115 22:31:07 InnoDB: The InnoDB memory heap is disabled 121115 22:31:07 InnoDB: Mutexes and rw_locks use GCC atomic builtins .. Then it recovered , without a reboot this time. from the log, what would cause this? I am currently running a dump to see if the problem resurfaces. edit: data partition is all in / since this is a hosted, defaulted file system unfortunately: Filesystem Size Used Avail Use% Mounted on /dev/vda3 742G 445G 260G 64% / udev 121G 4.0K 121G 1% /dev tmpfs 49G 248K 49G 1% /run none 5.0M 0 5.0M 0% /run/lock none 121G 0 121G 0% /run/shm /dev/vda1 99M 54M 40M 58% /boot my.cnf: [client] port = 3306 socket = /var/run/mysqld/mysqld.sock [mysqld_safe] socket = /var/run/mysqld/mysqld.sock nice = 0 [mysqld] skip-name-resolve innodb_file_per_table default_storage_engine=InnoDB user = mysql socket = /var/run/mysqld/mysqld.sock port = 3306 basedir = /usr datadir = /data/mysql tmpdir = /tmp skip-external-locking key_buffer = 512M max_allowed_packet = 128M thread_stack = 192K thread_cache_size = 64 myisam-recover = BACKUP max_connections = 500 table_cache = 812 table_definition_cache = 812 #query_cache_limit = 4M #query_cache_size = 512M join_buffer_size = 512K innodb_additional_mem_pool_size = 20M innodb_buffer_pool_size = 196G #innodb_file_io_threads = 4 #innodb_thread_concurrency = 12 innodb_flush_log_at_trx_commit = 1 innodb_log_buffer_size = 8M innodb_log_file_size = 1024M innodb_log_files_in_group = 2 innodb_max_dirty_pages_pct = 90 innodb_lock_wait_timeout = 120 log_error = /var/log/mysql/error.log long_query_time = 5 slow_query_log = 1 slow_query_log_file = /var/log/mysql/slowlog.log [mysqldump] quick quote-names max_allowed_packet = 16M [mysql] [isamchk] key_buffer = 16M

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• MySQL Connection Timeout Issue - Grails Application on Tomcat using Hibernate and ORM

  - by gav

  Hi Guys I have a small grails application running on Tomcat in Ubuntu on a VPS. I use MySql as my datastore and everything works fine unless I leave the application for more than half a day (8 hours?). I did some searching and apparently this is the default wait_timeout in mysql.cnf so after 8 hours the connection will die but Tomcat won't know so when the next user tries to view the site they will see the connection failure error. Refreshing the page will fix this but I want to get rid of the error altogether. For my version of MySql (5.0.75) I have only my.cnf and it doesn't contain such a parameter, In any case changing this parameter doesn't solve the problem. This Blog Post seems to be reporting a similar error but I still don't fully understand what I need to configure to get this fixed and also I am hoping that there is a simpler solution than another third party library. The machine I'm running on has 256MB ram and I'm trying to keep the number of programs/services running to a minimum. Is there something I can configure in Grails / Tomcat / MySql to get this to go away? Thanks in advance, Gav From my Catalina.out; 2010-04-29 21:26:25,946 [http-8080-2] ERROR util.JDBCExceptionReporter - The last packet successfully received from the server was 102,906,722 milliseconds$ 2010-04-29 21:26:25,994 [http-8080-2] ERROR errors.GrailsExceptionResolver - Broken pipe java.net.SocketException: Broken pipe at java.net.SocketOutputStream.socketWrite0(Native Method) ... 2010-04-29 21:26:26,016 [http-8080-2] ERROR util.JDBCExceptionReporter - Already closed. 2010-04-29 21:26:26,016 [http-8080-2] ERROR util.JDBCExceptionReporter - Already closed. 2010-04-29 21:26:26,017 [http-8080-2] ERROR servlet.GrailsDispatcherServlet - HandlerInterceptor.afterCompletion threw exception org.hibernate.exception.GenericJDBCException: Cannot release connection at java.lang.Thread.run(Thread.java:619) Caused by: java.sql.SQLException: Already closed. at org.apache.commons.dbcp.PoolableConnection.close(PoolableConnection.java:84) at org.apache.commons.dbcp.PoolingDataSource$PoolGuardConnectionWrapper.close(PoolingDataSource.java:181) ... 1 more

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• Python MySQL wrong architecture error

  - by phoebebright

  I've been at this for some time and read many sites on the subject. suspect I have junk lying about causing this problem. But where? This is the error when I import MySQLdb in python: >>> import MySQLdb /Library/Python/2.6/site-packages/MySQL_python-1.2.3c1-py2.6-macosx-10.6-universal.egg/_mysql.py:3: UserWarning: Module _mysql was already imported from /Library/Python/2.6/site-packages/MySQL_python-1.2.3c1-py2.6-macosx-10.6-universal.egg/_mysql.pyc, but /Users/phoebebr/Downloads/MySQL-python-1.2.3c1 is being added to sys.path Traceback (most recent call last): File "<stdin>", line 1, in <module> File "MySQLdb/__init__.py", line 19, in <module> import _mysql File "build/bdist.macosx-10.6-universal/egg/_mysql.py", line 7, in <module> File "build/bdist.macosx-10.6-universal/egg/_mysql.py", line 6, in __bootstrap__ ImportError: dlopen(/Users/phoebebr/.python-eggs/MySQL_python-1.2.3c1-py2.6-macosx-10.6-universal.egg-tmp/_mysql.so, 2): no suitable image found. Did find: /Users/phoebebr/.python-eggs/MySQL_python-1.2.3c1-py2.6-macosx-10.6-universal.egg-tmp/_mysql.so: mach-o, but wrong architecture I'm trying for 64 bit so checked here: file $(which python) /usr/bin/python: Mach-O universal binary with 3 architectures /usr/bin/python (for architecture x86_64): Mach-O 64-bit executable x86_64 /usr/bin/python (for architecture i386): Mach-O executable i386 /usr/bin/python (for architecture ppc7400): Mach-O executable ppc file $(which mysql) /usr/local/mysql/bin/mysql: Mach-O 64-bit executable x86_64 Have set my default version of python to 2.6 python Python 2.6.1 (r261:67515, Feb 11 2010, 00:51:29) [GCC 4.2.1 (Apple Inc. build 5646)] on darwin Tried deleting build directory and python setup.py clean Renamed Python/2.5/site-packages so it could not try and pick that up. Run out of ideas. Any suggestions?

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• Memory allocation error from MySql ODBC 5.1 driver in C# application on insert statement

  - by Chinjoo

  I have a .NET Wndows application in C#. It's a simple Windows application that is using the MySql 5.1 database community edition. I've downloaded the MySql ODBC driver and have created a dsn to my database on my local machine. On my application, I can perform get type queries without problems, but when I execute a given insert statement (not that I've tried doing any others), I get the following error: {"ERROR [HY001] [MySQL][ODBC 5.1 Driver][mysqld-5.0.27-community-nt]Memory allocation error"} I'm running on a Windows XP machine. My machine has 1 GB of memory. Anyone have any ideas? See code below OdbcConnection MyConn = DBConnection.getDBConnection(); int result = -1; try { MyConn.Open(); OdbcCommand myCmd = new OdbcCommand(); myCmd.Connection = MyConn; myCmd.CommandType = CommandType.Text; OdbcParameter userName = new OdbcParameter("@UserName", u.UserName); OdbcParameter password = new OdbcParameter("@Password", u.Password); OdbcParameter firstName = new OdbcParameter("@FirstName", u.FirstName); OdbcParameter LastName = new OdbcParameter("@LastName", u.LastName); OdbcParameter sex = new OdbcParameter("@sex", u.Sex); myCmd.Parameters.Add(userName); myCmd.Parameters.Add(password); myCmd.Parameters.Add(firstName); myCmd.Parameters.Add(LastName); myCmd.Parameters.Add(sex); myCmd.CommandText = mySqlQueries.insertChatUser; result = myCmd.ExecuteNonQuery(); } catch (Exception e) { //{"ERROR [HY001] [MySQL][ODBC 5.1 Driver][mysqld-5.0.27-community-nt]Memory // allocation error"} EXCEPTION ALWAYS THROWN HERE } finally { try { if (MyConn != null) MyConn.Close(); } finally { } }

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• oRecordset in ASP.NET mySQL problem

  - by StealthRT

  I have this mySQL code that connects to my server. It connects just fine: Dim MyConString As String = "DRIVER={MySQL ODBC 3.51 Driver};" & _ "SERVER=xxx.com;" & _ "DATABASE=xxx;" & _ "UID=xxx;" & _ "PASSWORD=xxx;" & _ "OPTION=3;" Dim conn As OdbcConnection = New OdbcConnection(MyConString) conn.Open() Dim MyCommand As New OdbcCommand MyCommand.Connection = conn MyCommand.CommandText = "select * from userinfo WHERE emailAddress = '" & theUN & "'"" MyCommand.ExecuteNonQuery() conn.Close() However, i have an old Classic ASP page that uses "oRecordset" to get the data from the mySQL server: Set oConnection = Server.CreateObject("ADODB.Connection") Set oRecordset = Server.CreateObject("ADODB.Recordset") oConnection.Open "DRIVER={MySQL ODBC 3.51 Driver}; SERVER=xxx.com; PORT=3306; DATABASE=xxx; USER=xxx; PASSWORD=xxx; OPTION=3;" sqltemp = "select * from userinfo WHERE emailAddress = '" & theUN & "'" oRecordset.Open sqltemp, oConnection,3,3 And i can use oRecordset as follows: if oRecordset.EOF then.... or strValue = oRecordset("Table_Name").value or oRecordset("Table_Name").value = "New Value" oRecordset.update etc... However, for the life of me, i can not find any .net code that is simular to that of my Classic ASP page!!!!! Any help would be great! :o) David

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• C# Entity FrameWork MySQL Slow Queries Count()

  - by Matthew M.

  Hello, I'm having a serious issue with MySQL and Entity Framework 4.0. I have dropped a Table onto the EF Designer surface, and everything seems OK. However, when I perform a query in the following fashion: using(entityContext dc = new entityContext()) { int numRows = dc.myTable.Count(); } The query that is generated looks something like this: SELECT `GroupBy1`.`A1` AS `C1` FROM (SELECT Count(1) AS `A1` FROM (SELECT `pricing table`.`a`, `pricing table`.`b`, `pricing table`.`c`, `pricing table`.`d`, `pricing table`.`e`, `pricing table`.`f`, `pricing table`.`g`, `pricing table`.`h`, `pricing table`.`i` FROM `pricing table` AS `pricing table`) AS `Extent1`) AS `GroupBy1` As should be evident, this is an excruciatingly unoptimized query. It is selecting every single row! This is not optimal, nor is it even possible for me to use MySQL + EF at this point. I have tried both the MySQL 6.3.1 [that was fun to install] and DevArt's dotConnect for MySQL and both produce the same results. This table has 1.5 million records.. and takes 6-11s to execute! What am I doing wrong ? Is there any way to optimize this [and other queries] to produce sane code like: SELECT COUNT(*) FROM table ? Generating the same query using SQLServer takes virtually no time and produces sane code. Help! Thanks! Matthew

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• Error Log states that I have MySQL connect error, yet script runs fine

  - by rob - not a robber

  Hello All, First, thanks for all the help I've received so far from StackOverflow. I've learned much. Once again, I'm posing a rudimentary question that I've searched on, but cannot find the exact answer to. Here or on PHP.net. It's sort of like what this guy asked, but not exactly: http://stackoverflow.com/questions/288603/mysql-throwing-query-error-yet-finishing-query-just-fine-why So, I saw my errorlog ballooning up when I checked my site directory and opened to notice that a bunch of errors have been recorded since I wrote this new Admin area. I know something is obviously awry with my scripting for the error to be thrown, but the weird thing is, the script actually runs through and pulls all the data I need without breaking. The log contains: PHP Warning: mysql_query() [function.mysql-query]: Access denied for user 'someuser'@'localhost' (using password: NO) in /home/mysite/adminconsole.php on line 15 I don't get that because that very line is where I setup my connection... the exact same way I do it everywhere else on the site with no problem. After that error, I have these thrown at the same time [09-Apr-2010 08:44:18] PHP Warning: mysql_query() [function.mysql-query]: A link to the server could not be established in /home/mysite/adminconsole.php on line 15 [09-Apr-2010 08:44:18] PHP Warning: mysql_fetch_array(): supplied argument is not a valid MySQL result resource in /home/mysite/adminconsole.php on line 16 From what I read in the other guys thread, the problem is the contents of the query maybe? Maybe my query is malformed? Thanks so much for any guidance you can provide. -Rob

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• How to group data changes by operation with MySQL triggers

  - by Jan-Henk

  I am using triggers in MySQL to log changes to the data. These changes are recorded on a row level. I can now insert an entry in my log table for each row that is changed. However, I also need to record the operation to which the changes belong. For example, a delete operation like "DELETE * FROM table WHERE type=x" can delete multiple rows. With the trigger I can insert an entry for each deleted row into the log table, but I would like to also provide a unique identifier for the operation as a whole, so that the log table looks something like: log_id operation_id tablename fieldname oldvalue newvalue 1 1 table id 1 null 2 1 table type a null 3 1 table id 2 null 4 1 table type a null 5 2 table id 3 null 6 2 table type b null 7 2 table id 4 null 8 2 table type b null Is there a way in MySQL to identify the higher level operation to which the row changes belong? Or is this only possible by means of application level code? In the future it would also be nice to be able to record the transaction to which an operation belongs. Another question is if it is possible to capture the actual SQL query, besides using the query log. I don't think so myself, but maybe I am missing something. It is of course possible to capture these at the application level, but the goal is to keep intrusions to the application level code as minimal as possible. When this is not possible with MySQL, how is this with other database systems? For the current project it is not an option to use something other than MySQL, but it would be nice to know for future projects.

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• Perl - MySQL connection problem in windows

  - by dexter

  I have two folders php and perl they contain index.php and index.pl respectivly in index.pl my perl code looks like: #!/usr/bin/perl use Mysql; print "Content-type: text/html\n\n"; print "<h2>PERL-mySQL Connect</h2>"; print "page info"; $host = "localhost"; $database = "cdcol"; $user = "root"; $password = ""; $db = Mysql->connect($host, $database, $user, $password); $db->selectdb($database); when i run above code (ie type: http://localhost:88/perl/ in browser) following error comes Error message: Can't locate Mysql.pm in @INC (@INC contains: C:/xampp/perl/site/lib/ C:/xampp/perl/lib C:/xampp/perl/site/lib C:/xampp/apache) at C:/xampp/htdocs/perl/index.pl line 2. BEGIN failed--compilation aborted at C:/xampp/htdocs/perl/index.pl line 2. while this works: in browser http://localhost:88/php/ where index.php has: <?php $con = mysql_connect("localhost","root",""); if($con) { if(mysql_select_db("cdcol", $con)) { $sql="SELECT Id From products"; if(mysql_query($sql)) { $result = mysql_query($sql); if ($result)............

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• Query MySQL data from Excel (or vice-versa)

  - by Charles

  I'm trying to automate a tedious problem. I get large Excel (.xls or .csv, whatever's more convenient) files with lists of people. I want to compare these against my MySQL database.* At the moment I'm exporting MySQL tables and reading them from an Excel spreadsheet. At that point it's not difficult to use =LOOKUP() and such commands to do the work I need, and of course the various text processing I need to do is easy enough to do in Excel. But I can't help but think that this is more work than it needs to be. Is there some way to get at the MySQL data directly from Excel? Alternately, is there a way I could access a reasonably large (~10k records) csv file in a sql script? This seems to be rather basic, but I haven't managed to make it work so far. I found an ODBC connection for MySQL but that doesn't seem to do what I need. In particular, I'm testing whether the name matches or whether any of four email addresses match. I also return information on what matched for the benefit of the next person to use the data, something like "Name 'Bob Smith' not found, but 'Robert Smith' matches on email address robert.smith@foo".

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• Mysql Server Optimization

  - by Ish Kumar

  Hi Geeks, We are having serious MySQL(InnoDB) performance issues at a moment when we do: (10-20) insertions on TABLE1 (10-20) updates on TABLE2 Note: Both above operations happens within fraction of a second. And this occurs every few (10-15) minutes. And all online users (approx 400-600) doing read operation on join of TABLE1 & TABLE2 every 1 second. Here is our mysql configuration info: http://docs.google.com/View?id=dfrswh7c_117fmgcmb44 Issues: Lot queries wait and expire later (saw it from phpmyadmin / processes). My poor MySQL server crashes sometimes Questions Q1: Any suggestions to optimize at MySQL level? Q2: I thinking to use persistent connections at application level, is it right? Info Added Later: Database Engine: InnoDB TABLE1 : 400,000 rows (inserting 8,000 daily) & TABLE2: 8,000 rows 1 second query: SELECT b.id, b.user_id, b.description, b.debit, b.created, b.price, u.username, u.email, u.mobile FROM TABLE1 b, TABLE2 u WHERE b.credit = 0 AND b.user_id = u.id AND b.auction_id = "12345" ORDER BY b.id DESC LIMIT 10; // there are few more but they are not so critical. Indexing is good, we are using them wisely. In above query all id's are indexed And TABLE1 has frequent insertions and TABLE2 has frequent updates.

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• Cheapest way to to determine if a MySQL connection is still alive

  - by MtnViewMark

  I have a pool of MySQL connections for a web-based data service. When it starts to service a request, it takes a connection from the pool to use. The problem is that if there has been a significant pause since that particular connection has been used, the server may have timed it out and closed its end. I'd like to be able to detect this in the pool management code. The trick is this: The environment in which I'm coding gives me only a very abstact API into the connection. I can basically only execute SQL statements. I don't have access to the actual socket or direct access to the MySQL client API. So, the question is: What is the cheapest MySQL statement I can execute on the connection to determine if it is working. For example SELECT 1; should work, but I'm wondering if there is something even cheaper? Perhaps something that doesn't even got across the wire, but is handled in the MySQL client lib and effectively answers the same question?

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• Searching a column containing CSV data in a MySQL table for existence of input values

  - by Adarsh R

  Hi, I have a table say, ITEM, in MySQL that stores data as follows: ID FEATURES -------------------- 1 AB,CD,EF,XY 2 PQ,AC,A3,B3 3 AB,CDE 4 AB1,BC3 -------------------- As an input, I will get a CSV string, something like "AB,PQ". I want to get the records that contain AB or PQ. I realized that we've to write a MySQL function to achieve this. So, if we have this magical function MATCH_ANY defined in MySQL that does this, I would then simply execute an SQL as follows: select * from ITEM where MATCH_ANY(FEAURES, "AB,PQ") = 0 The above query would return the records 1, 2 and 3. But I'm running into all sorts of problems while implementing this function as I realized that MySQL doesn't support arrays and there's no simple way to split strings based on a delimiter. Remodeling the table is the last option for me as it involves lot of issues. I might also want to execute queries containing multiple MATCH_ANY functions such as: select * from ITEM where MATCH_ANY(FEATURES, "AB,PQ") = 0 and MATCH_ANY(FEATURES, "CDE") In the above case, we would get an intersection of records (1, 2, 3) and (3) which would be just 3. Any help is deeply appreciated. Thanks

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• php import to mysql hosted on godaddy

  - by julio

  Yeah, I know! It's not my choice. I am doing a large data import using a PHP script into a mysql DB hosted on godaddy. It seems their mysql connection gets killed every few hours regardless of what work it's doing. Their tech support is useless, and I've exhausted myself writing attempted workarounds. Right now, I'm trying to do a mysql_ping every few minutes, and if the ping returns false, I attempt to open up a new db connection. My script (which takes many hours to complete), keeps failing with the very unhelpful message of "mysql server has gone away". I understand mysql trying to close a connection that's been open too long, but the connection is not idle-- it's busy basically the whole time, and with the pings I've written in, it should not be idle longer than 5 minutes at most at any time. (These same scripts work with no errors on Amazon AWS servers, my local servers, etc.) Any help most appreciated! I'm about to give up.

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• MySQL SELECT Statement not working when executed from PHP

  - by Andrew K

  Hello all, I have the following piece of code, executing a pretty simple MySQL query: $netnestquery = 'SELECT (`nested`+1) AS `nest` FROM `ipspace6` WHERE `id`<='.$adaddr.' AND `subnet`<='.$postmask.' AND `type`="net" AND `addr` NOT IN(SELECT `id` FROM `ipspace6` WHERE `addr`<'.$adaddr.' AND `type`="broadcast") ORDER BY `id`,`subnet` DESC LIMIT 1'; $netnestresults = mysql_query($netnestquery); $netnestrow = mysql_fetch_array($netnestresults); $nestlvl = $netnestrow['nest']; echo '<br> NESTQ: '.$netnestquery; Now, when I execute this in PHP, I get no results; an empty query. However, when I copy and paste the query echoed by my code (for debug purposes) into the mysql command line, I get a valid result: mysql> SELECT (`nested` + 1) AS `nest` FROM `ipspace6` WHERE `id`<=50552019054038629283648959286463168512 AND `subnet`<=36 AND `type`='net' AND `addr` NOT IN (SELECT `id` FROM `ipspace6` WHERE `addr`<50552019054038629283648959286463168512 AND `type`='broadcast') ORDER BY `id`,`subnet` DESC LIMIT 1; +------+ | nest | +------+ | 1 | +------+ 1 row in set (0.00 sec) Can anybody tell me what I'm doing wrong? I can't put quotes around my variables, as then MySQL will try to evaluate the variable as a string, when it is, in fact, a very large decimal. I think I might just be making a stupid mistake somewhere, but I can't tell where.

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• how does MySQL implement the "group by"?

  - by user188916

  I read from the MySQL Reference Manual and find that when it can take use of index,it just do index scan,other it will create tmp tables and do things like filesort. And I also read from other article that the "Group By" result will sort by group by columns by default,if "order by null" clause added,it won't don filesort. The difference can be found from the "explain ..." clause. so my problem is:what is the difference between "group by" clause that with "order by null" and which doesn't have? I try to use profiling to see what mysql do on the background,and only see result like: result for group clause without order by null: |preparing | 0.000016 | | Creating tmp table | 0.000048 | | executing | 0.000009 | | Copying to tmp table | 0.000109 | **| Sorting result | 0.000023 |** | Sending data | 0.000027 | result for clause with "order by null": preparing | 0.000016 | | Creating tmp table | 0.000052 | | executing | 0.000009 | | Copying to tmp table | 0.000114 | | Sending data | 0.000028 | So I guess what MySQL do when the "order by null" added,it does not use filesort algorithm,maybe when it creates the tmp table,it uses index as well,and then use the index to do group by operation,when completed,it just read result from the table rows and does not sort the result. But my original opinion is that MySQL can use quicksort to sort the items and then do group by,so the result will be sorted as well. Any opinion appreciated,thanks.

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• MySQL Database is Indexed at Apache Solr, How to access it via URL

  - by Wasim

  data-config.xml <dataConfig> <dataSource encoding="UTF-8" type="JdbcDataSource" driver="com.mysql.jdbc.Driver" url="jdbc:mysql://localhost:3306/somevisits" user="root" password=""/> <document name="somevisits"> <entity name="login" query="select * from login"> <field column="sv_id" name="sv_id" /> <field column="sv_username" name="sv_username" /> </entity> </document> </dataConfig> schema.xml <?xml version="1.0" encoding="UTF-8" ?> <schema name="example" version="1.5"> <fields> <field name="sv_id" type="string" indexed="true" stored="true" required="true" multiValued="false" /> <field name="username" type="string" indexed="true" stored="true" required="true"/> <field name="_version_" type="long" indexed="true" stored="true" multiValued="false"/> <field name="text" type="string" indexed="true" stored="false" multiValued="true"/> </fields> <uniqueKey>sv_id</uniqueKey> <types> <fieldType name="string" class="solr.StrField" sortMissingLast="true" /> <fieldType name="long" class="solr.TrieLongField" precisionStep="0" positionIncrementGap="0"/> </types> </schema> Solr successfully imported mysql database using full http://[localSolr]:8983/solr/#/collection1/dataimport?command=full-import My question is, how to access that mysql imported database now?

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• trouble connecting to MySql DB (PHP)

  - by user332817

  Hi I have the following PHP code to connect to my db. <?php ob_start(); $host="localhost"; // Host name $username="root"; // Mysql username $password=""; // Mysql password $db_name="test"; // Database name $tbl_name="members"; // Table name // Connect to server and select databse. mysql_connect("$host", "$username", "$password")or die("cannot connect"); ?> however I get the following error: Warning: mysql_connect() [function.mysql-connect]: [2002] A connection attempt failed because the connected party did not (trying to connect via tcp://localhost:3306) in C:\Program Files (x86)\EasyPHP-5.3.2i\www\checklogin.php on line 11 Warning: mysql_connect() [function.mysql-connect]: A connection attempt failed because the connected party did not properly respond after a period of time, or established connection failed because connected host has failed to respond. in C:\Program Files (x86)\EasyPHP-5.3.2i\www\checklogin.php on line 11 Fatal error: Maximum execution time of 30 seconds exceeded in C:\Program Files (x86)\EasyPHP-5.3.2i\www\checklogin.php on line 11 I am able to add a db/tables via phpmyadmin but I cant connect using php. here is a screenshot of my phpmyadmin page: http://img294.imageshack.us/img294/1589/sqls.jpg any help would be appreciated, thanks in advance.

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