I have a data set which I hope to simulate the spreading dynamic with community structure. The steps I follow is import the data to a complex network with Networkx partition the network into some modules which are known as communities simulate the SIS model and draw plots with and without communities. Something confused me between step 2 and step 3. After partitioning, I get some communities which contains nodes number. The community numbers and nodes numbers are the only input to step 3, and how I simulate SIS with and without communities?