-
as seen on Stack Overflow
- Search for 'Stack Overflow'
I am submitting a job using qsub that runs parallelized R. My
intention is to have R programme running on 4 different cores rather than 8 cores. Here are some of
my settings in PBS file:
#PBS -l nodes=1:ppn=4
....
time R --no-save < program1.R > program1.log
I am issuing the command…
>>> More
-
as seen on Stack Overflow
- Search for 'Stack Overflow'
Does anybody know a Java implementation of the DRMAA-API that is known to work with PBS/Torque cluster software?
The background behind this: I would like to submit jobs to a newly set-up linux cluster from java using a DRMAA compliant API. The cluster is managed by PBS/Torque. Torque includes PBS…
>>> More
-
as seen on Stack Overflow
- Search for 'Stack Overflow'
Hi,
some short and probably stupid questions about PBS:
1- I submit jobs using
qsub job_file
is it possible to submit a (sub)job inside a job file?
2- I have the following script:
qsub job_a
qsub job_b
For launching job_b, it would be great to have before the results of job_a finished.…
>>> More
-
as seen on Super User
- Search for 'Super User'
I've got a giant computation running on a Scientific Linux cluster. At present I have over 600 jobs parked in the queue, waiting for processor time, while a few are running.
I'm trying to use the qalter command on some of the idle but scheduled jobs. I'd like to schedule them for a later time…
>>> More
-
as seen on Stack Overflow
- Search for 'Stack Overflow'
Hi,
when you submit jobs to a PBS server, is it possible to specify the nodes that we want to use in a list?
Thanks
>>> More