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  • Why is MediaWiki auto-linking the word “files”

    - by dfrankow
    Our MediaWiki installation is auto-linking the word "files". So Here are some files: a, b, c would result in the word "files" being linked to http://ourhost/mediawiki/files. Why is that happening and how do I make it stop? I can use the nowiki tag, but perhaps it does not surprise you that the word "files" appears often, and it is aggravating to use that tag all the time. Here is some info on our MediaWiki installation from Special:Version. Yes, it's old. Installed software Product Version MediaWiki 1.16.5 PHP 5.2.14-pl0-gentoo (apache2handler) MySQL 5.0.84 Installed extensions Parser hooks GoogleDocs4MW (Version 1.1) Adds tag for Google Docs' spreadsheets display Jack Phoenix SyntaxHighlight (Version 1.0.8.6) Provides syntax highlighting using GeSHi Highlighter Brion Vibber, Tim Starling, Rob Church and Niklas Laxström WebServiceSequenceDiagram(Version 1.0) Render inline sequence diagrams using websequencediagrams.com Eddie Olsson Other MWSearch MWSearch plugin Kate Turner and Brion Vibber Extension functions efLucenePrefixSetup Parser extension tags gallery, googlespreadsheet, html, nowiki, pre, sequencediagram, source and syntaxhighlight Parser function hooks anchorencode, basepagename, basepagenamee, defaultsort, displaytitle, filepath, formatdate, formatnum, fullpagename, fullpagenamee, fullurl, fullurle, gender, grammar, int, language, lc, lcfirst, localurl, localurle, namespace, namespacee, ns, nse, numberingroup, numberofactiveusers, numberofadmins, numberofarticles, numberofedits, numberoffiles, numberofpages, numberofusers, numberofviews, padleft, padright, pagename, pagenamee, pagesincategory, pagesize, plural, protectionlevel, special, subjectpagename, subjectpagenamee, subjectspace, subjectspacee, subpagename, subpagenamee, tag, talkpagename, talkpagenamee, talkspace, talkspacee, uc, ucfirst and urlencode

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  • Can't install plugins in Eclipse 3.5 (Galileo) on Ubuntu

    - by dfrankow
    Eclipse Version 3.5.2 Build id: M20100211-1343 Platform: Ubuntu 10.4 I go to install any new software Eclipse plugins (e.g., pydev, subclipse), and it gets to the 60% mark and stops. I wait for a long while and nothing happens. When I hit "cancel" a security warning comes up "Warning: You are installing software that contains unsigned content.." I click "OK" but it's too late because I've cancelled the installation already. It won't pop up until I hit "cancel". I've tried moving all the windows around, that security warning is not there. In previous incarnations of Eclipse, I've been able to click "OK" on that warning (no canceling) and all is well. I've also tried two JREs (Ubuntu's default openjdk and Sun's JDK 1.6.0_20). Is there some way to get that warning to come up, or even just have it always accept unsigned content? I've downloaded the zip of pydev and unzipped it into ~/.eclipse/org.eclipse.platform_3.5.0_155965261/ and Eclipse doesn't have Pydev when restarted, so manually installing plugins is also a pain. This is not my day. Yes, I see the other questions of this type and they don't seem to answer my problem.

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  • How does the Twitter rate limit API work with multiple accounts?

    - by dfrankow
    I know there's a Rest API to check the Twitter rate limit. To summarize policy: 150 for an IP, and 150 per non-whitelisted account except for searches (which are IP only). However, my app is using Twython, authenticated, but the limit seems to decrease for both my accounts as I use it. Example: No authentication: $ wget http://api.twitter.com/1/account/rate_limit_status.xml -O - <?xml version="1.0" encoding="UTF-8"?> <hash> <hourly-limit type="integer">150</hourly-limit> <reset-time-in-seconds type="integer">1266968961</reset-time-in-seconds> <reset-time type="datetime">2010-02-23T23:49:21+00:00</reset-time> <remaining-hits type="integer">134</remaining-hits> </hash> Authentication with account #1: $ wget --user b... --password=youwish http://api.twitter.com/1/account/rate_limit_status.xml -O - <?xml version="1.0" encoding="UTF-8"?> <hash> <reset-time-in-seconds type="integer">1266968961</reset-time-in-seconds> <reset-time type="datetime">2010-02-23T23:49:21+00:00</reset-time> <remaining-hits type="integer">134</remaining-hits> <hourly-limit type="integer">150</hourly-limit> </hash> Authentication with account #2: $ wget --user d... --password=youwish http://api.twitter.com/1/account/rate_limit_status.xml -O - <?xml version="1.0" encoding="UTF-8"?> <hash> <reset-time type="datetime">2010-02-23T23:49:21+00:00</reset-time> <remaining-hits type="integer">134</remaining-hits> <hourly-limit type="integer">150</hourly-limit> <reset-time-in-seconds type="integer">1266968961</reset-time-in-seconds> </hash> You see how both accounts seem to have exactly the same rate limit info (134/150)? I only used one account in my app, so why do both accounts show decrease?

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  • Performance of Java matrix math libraries?

    - by dfrankow
    We are computing something whose runtime is bound by matrix operations. (Some details below if interested.) This experience prompted the following question: Do folk have experience with the performance of Java libraries for matrix math (e.g., multiply, inverse, etc.)? For example: JAMA: http://math.nist.gov/javanumerics/jama/ COLT: http://acs.lbl.gov/~hoschek/colt/ Apache commons math: http://commons.apache.org/math/ I searched and found nothing. Details of our speed comparison: We are using Intel FORTRAN (ifort (IFORT) 10.1 20070913). We have reimplemented it in Java (1.6) using Apache commons math 1.2 matrix ops, and it agrees to all of its digits of accuracy. (We have reasons for wanting it in Java.) (Java doubles, Fortran real*8). Fortran: 6 minutes, Java 33 minutes, same machine. jvisualm profiling shows much time spent in RealMatrixImpl.{getEntry,isValidCoordinate} (which appear to be gone in unreleased Apache commons math 2.0, but 2.0 is no faster). Fortran is using Atlas BLAS routines (dpotrf, etc.). Obviously this could depend on our code in each language, but we believe most of the time is in equivalent matrix operations. In several other computations that do not involve libraries, Java has not been much slower, and sometimes much faster.

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  • How to "defragment" MongoDB index effectively in production?

    - by dfrankow
    I've been looking at MongoDB. Feels good. I added some indexes to a collection, uploaded a bunch of data, then removed all the data, and I noticed the indexes did not change size, similar to the behavior reported here. If I call db.repairDatabase() the indexes are then squashed to near-zero. Similarly if I don't remove all the data, but call repairDatabase(), the indexes are squashed somewhat (perhaps because unused extends are truncated?). I am getting index size from "totalIndexSize" of db.collection.stats(). However, that takes a long time (I've read it could be hours on a large database). It's unclear to me how available the database is for reads or writes while it is running. I am guessing not so available. Since I want to run as few instances of mongod as possible, I want to understand more about how indexes are managed after deletes. Can anyone point me to anything or give any advice?

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  • How to normalize a URL in Java?

    - by dfrankow
    URL normalization (or URL canonicalization) is the process by which URLs are modified and standardized in a consistent manner. The goal of the normalization process is to transform a URL into a normalized or canonical URL so it is possible to determine if two syntactically different URLs are equivalent. Strategies include lowercasing, adding trailing slashes, https = http, etc. The Wikipedia page lists many. Got a favorite method of doing this in Java? Perhaps a library (Nutch?), but I'm open. Smaller and fewer dependencies is better. I'll handcode something for now and keep an eye on this question.

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  • Bulk get of child entities on Google app engine?

    - by dfrankow
    On Google App Engine in Python, I have a Visit entity that has a parent of Patient. A Patient may have multiple visits. I need to set the most_recent_visit (and some auxiliary visit data) somewhere for later querying, probably in another child entity that Brett Slatkin might call a "relationship index entity." I wish to do so in a bulk style as follows: 1. get 100 Patient keys 2. get all Visits that have any of the Patients from 1 as an ancestor 3. go through the Visits and get the latest for each Patient Is there any way to perform step 2 in a bulk get? I know there is a way to bulk get entities from a list of keys, and there is a way to match a single entity by its ancestor.

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  • Find top N elements in a Multiset from Google Collections?

    - by dfrankow
    A Google Collections Multiset is a set of elements each of which has a count (i.e. may be present multiple times). I can't tell you how many times I want to do the following Make a histogram (exactly Multiset) Get the top N values from the histogram Examples: top 10 URLs, top 10 tags, ... What is the canonical way to do #2 given a Multiset? Here is a blog post about it, but that code is not quite what I want. First, it returns everything, not just top N. Second, it copies (is it possible to avoid a copy?). Third, I usually want a deterministic sort, i.e. tiebreak if counts are equal.

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