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  • Parameterized SPARQL query with JENA

    - by sandra
    I'm trying to build a small semantic web application using Jena framework, JSP and JAVA. I have a remote SPARQL endpoint and I've already written a simple query which works fine but now I need to use some parameters. Here is my code so far: final static String serviceEndpoint = "http://fishdelish.cs.man.ac.uk/sparql/"; String comNameQuery = "PREFIX fd: <http://fishdelish.cs.man.ac.uk/rdf/vocab/resource/> " + "SELECT ?name ?language ?type" + "WHERE { ?nameID fd:comnames_ComName ?name ;" + "fd:comnames_Language ?language ;" + "fd:comnames_NameType ?type ." + "}"; Query query = QueryFactory.create(comNameQuery); QueryExecution qe = QueryExecutionFactory.sparqlService(serviceEndpoint,query); try { ResultSet rs = qe.execSelect(); if ( rs.hasNext() ) { System.out.println(ResultSetFormatter.asText(rs)); } } catch(Exception e) { System.out.println(e.getMessage()); } finally { qe.close(); } What I want to do is to parameterized ?name. I'm new to Jena and I'm not really sure how to use parameters in a SPARQL query. I would appreciate it if someone could help me with this.

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  • jena ontology api

    - by laknath27
    i'm new to jena and protege.i did some stuff with these. i have some problems:: 1) Do i need to use sparql query to get the ontology classes,subclasses,property and values? or can do it with owl-api? can u show me the way? 2) how to get the data property values? 3) how to i load the ontology that define in my local machine and access the classes ? thanks:::

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  • Jena result in UTF-8 format

    - by john
    How can I get in Jena (Java language) result in UTF-8 format? My code: Query query= QueryFactory.create(queryString); QueryExecution qexec= QueryExecutionFactory.sparqlService("http://lod.openlinksw.com/sparql", queryString); ResultSet results = qexec.execSelect(); List<QuerySolution> list = ResultSetFormatter.toList(results); System.out.println(list.get(i).get("churchname"));

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  • Jena Effects of Different Entailment Regimes

    - by blueomega
    I am trying sparql and the use of entailment. As a example i used http://www.w3.org/TR/2010/WD-sparql11-entailment-20100126/#t112 i try to put them in jena. OntClass book1= model.createClass(NS+"book1"); OntClass book2=model.createClass(NS+"book2"); OntClass book3=model.createClass(NS+"book3"); OntClass publication=model.createClass(NS+"publication"); OntClass article=model.createClass(NS+"article"); OntClass mit=model.createClass(NS+"MIT"); ObjectProperty a = model.createObjectProperty(NS+"a"); ObjectProperty publishes = model.createObjectProperty(NS+"publishes"); book1.addProperty(a, publication); book2.addProperty(a, article); publication.addSubClass(article); publishes.addRange(publication); mit.addProperty(publishes, book3); where model is type OntModel. and i used the query similar to the problem "PREFIX table: "I have correct namespace here"+ "SELECT *"+ "WHERE"+ "{"+ " ?x ?y table:publication ."+ "}"; The model was created like this. Hope OntModelSpec is ok. OntModel m = ModelFactory.createOntologyModel(OntModelSpec.OWL_MEM_RDFS_INF, null); i get as results from query x y | http://www.example.com/ontologies/sample.owl#publishes | rdfs:range | | http://www.example.com/ontologies/sample.owl#article | rdfs:subClassOf | | http://www.example.com/ontologies/sample.owl#book1 | http://www.example.com/ontologies/sample.owl#a | | http://www.example.com/ontologies/sample.owl#publication | rdfs:subClassOf | | http://www.example.com/ontologies/sample.owl#book3 | rdf:type | Can anyone give me a example, with and without entailment, so a cant try code, can get the results right.

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  • Extracting URIs from RDF web page in Java using Jena Library

    - by Prannoy Mittal
    I have written following code for extratcting URIs from a web page with content type application/rdf-xml for Linked Data application. public static void test(String url) { try { Model read = ModelFactory.createDefaultModel().read(url); System.out.println("to go"); StmtIterator si; si = read.listStatements(); System.out.println("to go"); while(si.hasNext()) { Statement s=si.nextStatement(); Resource r=s.getSubject(); Property p=s.getPredicate(); RDFNode o=s.getObject(); System.out.println(r.getURI()); System.out.println(p.getURI()); System.out.println(o.asResource().getURI()); } } catch(JenaException | NoSuchElementException c) { } } But above code is not extracting all URIs. It provides only few of the URIs. Please guide me where i Went wrong?? hey Rafeel For Eq: for XML File : <?xml version="1.0"?> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:ex="http://example.org/stuff/1.0/"> <rdf:Description rdf:about="http://www.w3.org/TR/rdf-syntax-grammar" dc:title="RDF/XML Syntax Specification (Revised)"> <ex:editor> <rdf:Description ex:fullName="Dave Beckett"> <ex:homePage rdf:resource="http://purl.org/net/dajobe/" /> </rdf:Description> </ex:editor> </rdf:Description> </rdf:RDF> The output is : Subject URI is http://www.w3.org/TR/rdf-syntax-grammar Predicate URI is http://example.org/stuff/1.0/editor Object URI is null Subject URI is http://www.w3.org/TR/rdf-syntax-grammar Predicate URI is http://purl.org/dc/elements/1.1/title Website is read

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  • Inferring using Jena

    - by Mikae Combarado
    InfModel infmodel = ModelFactory.createInfModel(reasoner, m); Resource vegetarian = infmodel.getResource(source + "Vegetarian"); Resource margherita = infmodel.getResource(source + "Example-Margherita"); if (infmodel.contains(margherita, RDF., vegetarian)) { System.out.println("Margherita is a memberOf Vegetarian pizza"); } The example given above is formed by formal pizza.owl. In this owl, Example-Margherita is an individual of Margherita class. So, it is already written in owl file. However, the problem is that the reasoner should infer that margherita-example should be also an vegetarian pizza. Could anyone please give an example that shows how to find an individual's possible inferred classes like in Protege ?(Protege correctly infers that Example-Margherita is a Vegetarian Pizza. However, I can't infer programmatically)

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  • Reading Ontology with Jena, feeding it with RDF triples, and producing correct RDF string output.

    - by JonB
    Hi, I have an ontology, which I read in with Jena to help me scrape some RDFa triples from a website. I don't currently store these triples in a Jena model, but that is fairly straight forward to do, its on my to do next list. The area I am struggling with, though, is to get Jena to output correct RDF for the ontology I have. The ontology uses Owl and RDFS definitions, but when I pass some example triples into the model, they don't appear correctly. Almost as if it doesn't know anything about the ontology. The output is, however, still valid RDF, just it's not coming out in the form I was hoping for. Am I correct in thinking that Jena should be able to produce well written RDF (not just valid) about the triples I have collected, based on the ontology or does this out stretch what it is capable of? Many thanks for any input.

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  • how to create Java Application and query about OWL using SPARQL/Jena and how to do it on local/remot

    - by user323889
    I want to create simple application using Java Jena and SPARQL ,that insert, delete , update and query the OWL/RDF data I worked on protege to create the ontology and noticed SPARQL in it but I want to use SPARQL using java and jena ... 1) I saw this thread and I knew how to use SPARQL with jena (after http)stackoverflow.com/questions/2267333/using-jena-to-create-a-sparql-query-on-dbpedia it did work with me .. but I want my own ontology to work .. I mean to upload it to server or to work on localhost or whatever ... 2) SPARQL doesn't support operations like update or insert .. but querying is there any other languages/methods that support these operations ? or I should created it manually in java in each application ... 3) how can I upload my ontology and I prefer something related to protege ? because I tried this which got bug : (after http )semweb.krasu.ru/protege2joseki/ and this (which gave me lot of issues) (after http and wwwdot)joseki.org/ nothing work .. 4) RDF-store ... is for just RDF ? because I am working on OWL files .. I mean for example using MySQL as RDF-store .. would it work for OWL concept ?

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  • Print the jena result set in html(servlet/jsp).

    - by Udayanga
    hi, I'm using servlet for manipulating ontology.I got the result of my SPARQL query and I want to display(print) that result in JSP(Servlet). Following code segment can be used to print the result in console. . . . com.hp.hpl.jena.query.Query query = QueryFactory.create(queryStr); QueryExecution qe = QueryExecutionFactory.create(query,model); com.hp.hpl.jena.query.ResultSet rs = qe.execSelect(); ResultSetFormatter.out(System.out, rs); any idea..? Thank in advance!

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  • What are the Jena methods used to access an ontology?

    - by amoosh
    Hello I'm new to ontologies, my assignment is to create an ontology using Protege V4.0.2, (which I've done) and to create a website over that ontology(which I'm working on), i just need the basics on how to search the ontology using the Jena library I dont have any specifics because i haven't yet started. but i'm in a time crunch, and i need to now exactly how i'm goning to do it

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  • ontology with java(jena)

    - by Udayanga
    I'm doing some project which is based on ontology.I want to identify semantic of the text that has entered by user. Is there any possible way to fulfill my task dealing with ontology through jena?

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  • What is the rationale behind Apache Jena's *everything is an interface if possible* design philosophy?

    - by David Cowden
    If you are familiar with the Java RDF and OWL engine Jena, then you have run across their philosophy that everything should be specified as an interface when possible. This means that a Resource, Statement, RDFNode, Property, and even the RDF Model, etc., are, contrary to what you might first think, Interfaces instead of concrete classes. This leads to the use of Factories quite often. Since you can't instantiate a Property or Model, you must have something else do it for you --the Factory design pattern. My question, then, is, what is the reasoning behind using this pattern as opposed to a traditional class hierarchy system? It is often perfectly viable to use either one. For example, if I want a memory backed Model instead of a database-backed Model I could just instantiate those classes, I don't need ask a Factory to give me one. As an aside, I'm in the process of writing a library for manipulating Pearltrees data, which is exported from their website in the form of an RDF/XML document. As I write this library, I have many options for defining the relationships present in the Peartrees data. What is nice about the Pearltrees data is that it has a very logical class system: A tree is made up of pearls, which can be either Page, Reference, Alias, or Root pearls. My question comes from trying to figure out if I should adopt the Jena philosophy in my library which uses Jena, or if I should disregard it, pick my own design philosophy, and stick with it.

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  • Which knowledge base/rule-based inference engine to choose for real time Runway incursion prevention

    - by Piligrim
    Hello, we are designing a project that would listen to dialog between airport controllers and pilots to prevent runway incursions (eg. one airplane is taking off while other is crossing the runway). Our professor wants us to use Jena for knowledge base (or anything else but it should be some sort of rule-based engine). Inference is not the main thing in Jena and there's not much documentation and examples of this. So we need an engine that would get messages from pilots as input and output possible risks of incursion or any other error in message protocol. It should be easy to write rules, and should be easy to provide engine with real time data. I image it something like this: A pilot sends a message that he lands on some runway, the system remembers that the runway is busy and no one should cross it If someone is given an instruction to cross this runway, the engine should fire a rule that something is wrong When the pilot sends a message that he left the runway and goes to the gate, the system clears the runway and lets other planes to use it. So is Jena, or prolog or any other rules engine suitable for this? I mean it is suitable, but do we really need to use it? I asked the prof. if we could just keep state of the runway and use some simple checks based on messages we receive and he said that it is not scalable and we need the knowledge base. Can someone give me any advise on which approach to use for this system? If you recommend k.b., then which one should we use? The project is written in java. Thank you.

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  • Problem in inferring instances that have integer cardinality constraint

    - by Mikae Combarado
    Hello, I have created an RDF/OWL file using Protege 4.1 alpha. I also created a defined class in Protege called CheapPhone. This class has a restriction which is shown below : (hasPrice some integer[< 350]) Whenever, a price of a phone is below 350, it is inferred as CheapPhone. There is no problem for inferring this in Protege 4.1 alpha. However, I cannot infer this using Jena. I also created a defined class called SmartPhone. This class also has a restriction which is shown below : (has3G value true) and (hasInternet value true) Whenever, a phone has 3G and Internet, it is inferred as SmartPhone. In this situation, there is no problem inferring this in both Protege and Jena. I have started to think that there is a problem in default inference engine of Jena. The code that I use in Java is below : Reasoner reasoner = ReasonerRegistry.getOWLReasoner(); reasoner = reasoner.bindSchema(ontModel); OntModelSpec ontModelSpec = OntModelSpec.OWL_MEM_MINI_RULE_INF; ontModelSpec.setReasoner(reasoner); // Create ontology model with reasoner support // ontModel was created and read before, so I don't share the code in order // not to create garbage here OntModel model = ModelFactory.createOntologyModel(ontModelSpec, ontModel); OntClass sPhone = model.getOntClass(ns + "SmartPhone"); ExtendedIterator s = sPhone.listInstances(); while(s.hasNext()) { OntResource mp = (OntResource)s.next(); System.out.println(mp.getURI()); } This code works perfectly and returns me the instances, but when I change the code below and make it appropriate for CheapPhone, it doesn't return anything. OntClass sPhone = model.getOntClass(ns + "CheapPhone"); Am I doing something wrong ?

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  • Problem of reading OWL/XML

    - by Mikae Combarado
    Hello, I have a problem reading OWL/XML files from Java using Jena. I have no problem reading RDF/XML files, but whenever I create a OWL/XML file from Protege and try to read it, Java gives this error below : WARN [main] (RDFDefaultErrorHandler.java:36) Exception in thread "main" java.lang.NullPointerException at com.hp.hpl.jena.rdf.arp.impl.XMLHandler.endElement(XMLHandler.java:143) The code that I use to retrieve RDF/XML is below : OntModel ontModel = ModelFactory.createOntologyModel(); InputStream in = FileManager.get().open(inputFileName); if (in == null) { throw new IllegalArgumentException( "File: " + inputFileName + " not found"); } ontModel.read(in, ""); This code works with RDF/XML perfectly. However, I cannot read an OWL/XML. I looked at Internet and I couldn't find anything. I would really appreciate, if someone shows me a way. Many thanks

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  • get property value

    - by laknath27
    HI, in my ontology i have the class called "festival" and it has property value called "CRISTMAS". it's a string type value.. son how can i get this value using JENA owl api.. CAN ANY ONE SHOW ME THE WAY :::::: THANKS

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  • OWL inferencing question

    - by user439170
    I am using the Jena semantic web framework version 2.6.3. I have code that creates a model with owl inferencing and then adds the following triples: [:bnode-3 rdf:type owl:Restriction] [:bnode-3 owl:onProperty :offspringOf] [:bnode-3 owl:someValuesFrom :Person] [:bnode-3 rdfs:subClassOf :Person] bnode-3 is supposed to be a restriction class which, for example, would contain :joe if :bob is a :Person and the following triple were asserted: [:joe :offspringOf :bob]. Then, since the restriction class is a subclass of Person, :joe would also be a person. And, in fact, this works. Whats confusing to me is that after I assert just the 4 triples at the top of this post, the inferencer creates a blank node which is a Person. In other words, the following triple is now in the model: [_:b0 rdf:type :Person] I don't understand why it would do this. Any help in understanding this would be greatly appreciated. Thanks. Kent.

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  • how to get SOURCE

    - by laknath27
    i do some development with jena ontology API.my ontology file in my local machine..when i'm going to read the model.. there is an error.. and i made ontology with protege and tried to read that file. String SOURCE = "http://www.owl-ontologies.com/Ontology1275995702";(it's XML:base value) //String NS = SOURCE + "#"; //InputStream in = FileManager.get().open("tourism.owl"); OntModel model = ModelFactory.createOntologyModel(OntModelSpec.OWL_MEM); model.read(SOURCE,"RDF/XML"); OntClass paper = model.getOntClass( SOURCE + "srilanka" ); how can i fix this?

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  • XML/RDF to Java Objects with XSD

    - by bmucklow
    So here's the scenario...I have an XSD file describing all the objects that I need. I can create the objects in Java using JAXB no problem. I have an XML/RDF file that I need to parse into those objects. What is the EASIEST way to do this? I have been looking into Jena and have played around with it, but can't see how to easily map the XML/RDF file to the XSD objects that were generated. Here is a snippet of the XSD file as well as the XML/RDF file: <?xml version="1.0" encoding="UTF-8"?> <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:a="http://langdale.com.au/2005/Message#" xmlns:sawsdl="http://www.w3.org/ns/sawsdl" targetNamespace="http://iec.ch/TC57/2007/profile#" elementFormDefault="qualified" attributeFormDefault="unqualified" xmlns="http://langdale.com.au/2005/Message#" xmlns:m="http://iec.ch/TC57/2007/profile#"> <xs:annotation/> <xs:element name="Profile" type="m:Profile"/> <xs:complexType name="Profile"> <xs:sequence> <xs:element name="Breaker" type="m:Breaker" minOccurs="0" maxOccurs="unbounded"/> And the XML/RDF: <!-- CIM XML Output For switch783:(295854688) --> <cim:Switch rdf:ID="Switch_295854688"> <cim:IdentifiedObject.mRID>Switch_295854688</cim:IdentifiedObject.mRID> <cim:IdentifiedObject.aliasName>Switch_295854688</cim:IdentifiedObject.aliasName> <cim:ConductingEquipment.phases rdf:resource="http://iec.ch/TC57/2009/CIM-schema-cim14#PhaseCode.ABC" /> <cim:Switch.circuit2>0001406</cim:Switch.circuit2> <cim:Equipment.Line rdf:resource="#Line_0001406" />

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  • SPARQL UNION - Result set incomplete

    - by jplevac
    I have two queries: query 1: SELECT DISTINCT ?o COUNT(?o) WHERE { ?s1 ?somep1 <predicate_one-uri>. ?s1 ?p ?o} query 2: SELECT DISTINCT ?o COUNT(?o) WHERE {?s2 ?somep2 <predicate_two-uri>.?s2 ?p ?o.} Each query gives me a different result set (as expected). I need to make a union of these two sets, from what I understand the query below should give me the set I want: SELECT DISTINCT ?o COUNT(?o) WHERE { { ?s1 ?somep1 <predicate_one-uri>.?s1 ?p1 ?o} UNION {?s2 ?somep2 <predicate_two-uri>.?s2 ?p2 ?o.} } The problem is that some results from query 1 are not in the union set and vice-versa for query 2. The union is not working properly as it does not incorporate all results of query 1 and query 2. Please advise on the proper structure of the sparql query for achieving the desired result set. Thanks in advance! JP Levac

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  • Error when compiling code with the Protege API

    - by Anto
    I am new to Protege API and I have just created on Eclipse a small application which uses an external OWL file. Also I did import all the necessary libraries. import java.util.Collection; import java.util.Iterator; import edu.stanford.smi.protege.exception.OntologyLoadException; import edu.stanford.smi.protegex.owl.ProtegeOWL; import edu.stanford.smi.protegex.owl.model.*; public class Trial { public static void main(String[] args) throws OntologyLoadException{ String uri = "C:/Documents and Settings/Anto/Desktop/travel.owl"; OWLModel owlModel = ProtegeOWL.createJenaOWLModelFromURI(uri); Collection classes = owlModel.getUserDefinedOWLNamedClasses(); for(Iterator it = classes.iterator(); it.hasNext();){ OWLNamedClass cls = (OWLNamedClass) it.next(); Collection instances = cls.getInstances(false); System.out.println("Class " + cls.getBrowserText()+ " (" + instances.size()+")"); for(Iterator jt = instances.iterator(); jt.hasNext();){ OWLIndividual individual = (OWLIndividual) jt.next(); System.out.println(" - "+ individual.getBrowserText()); } } } } When I do compile however I get the following errors: WARNING: [Local Folder Repository] The specified file must be a directory. (C:\Documents and Settings\Anto\My Documents\Eclipse Workspace\ProtegeTrial\plugins\edu.stanford.smi.protegex.owl) LocalFolderRepository.update() SEVERE: Exception caught -- java.net.URISyntaxException: Illegal character in path at index 12: C:/Documents and Settings/CiuffreA/Desktop/travel.owl at java.net.URI$Parser.fail(URI.java:2809) at java.net.URI$Parser.checkChars(URI.java:2982) at java.net.URI$Parser.parseHierarchical(URI.java:3066) at java.net.URI$Parser.parse(URI.java:3014) at java.net.URI.<init>(URI.java:578) at edu.stanford.smi.protegex.owl.jena.JenaKnowledgeBaseFactory.getFileURI(Unknown Source) at edu.stanford.smi.protegex.owl.jena.JenaKnowledgeBaseFactory.loadKnowledgeBase(Unknown Source) at edu.stanford.smi.protege.model.Project.loadDomainKB(Unknown Source) at edu.stanford.smi.protege.model.Project.createDomainKnowledgeBase(Unknown Source) at edu.stanford.smi.protegex.owl.jena.creator.OwlProjectFromUriCreator.create(Unknown Source) at edu.stanford.smi.protegex.owl.ProtegeOWL.createJenaOWLModelFromURI(Unknown Source) at Trial.main(Trial.java:14) Exception in thread "main" java.lang.NullPointerException at edu.stanford.smi.protegex.owl.jena.JenaKnowledgeBaseFactory.loadKnowledgeBase(Unknown Source) at edu.stanford.smi.protege.model.Project.loadDomainKB(Unknown Source) at edu.stanford.smi.protege.model.Project.createDomainKnowledgeBase(Unknown Source) at edu.stanford.smi.protegex.owl.jena.creator.OwlProjectFromUriCreator.create(Unknown Source) at edu.stanford.smi.protegex.owl.ProtegeOWL.createJenaOWLModelFromURI(Unknown Source) at Trial.main(Trial.java:14) Does anyone have an idea on where the problem should be?

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  • Best way to create a SPARQL endpoint for a RDBMS (MySQL database)

    - by Ankur
    I am doing (want to do) some experiments with Linked Open Datasets particularly those put out by governments. I have a RDBMS (more specifically MySQL). I designed it with semantic web ideas in mind i.e. I have a information stored as objects, predicates and classes which define objects. In turn all objects are related to each other though statements of the form subject -- predicate -- object (where the subjects are from the objects table). I want to be able to query other RDF triple stores from my application and let other triple stores query my data. Is it possible to "set something up" so that this is possible? I have looked at Jena. Using Jena seems to mean I have to it as a storage application rather than MySQL - the only problem with this is that I include a new concept called a category (which I don't think is part of the semantic web languages). I will use categories to help with displaying information (they don't have any other meaning) but using Jena seems to mean that I can't organise predicates under categories for more convenient viewing. I am using Java so a JAVA API is preferred. It's also possible I misunderstood the purpose of Jena, and maybe that can be of use, but I am not sure how. I am sure four days from now this question will seem rather silly, but at the moment I am somewhat confused about how to proceed.

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  • Alignment in assembly

    - by jena
    Hi, I'm spending some time on assembly programming (Gas, in particular) and recently I learned about the align directive. I think I've understood the very basics, but I would like to gain a deeper understanding of its nature and when to use alignment. For instance, I wondered about the assembly code of a simple C++ switch statement. I know that under certain circumstances switch statements are based on jump tables, as in the following few lines of code: .section .rodata .align 4 .align 4 .L8: .long .L2 .long .L3 .long .L4 .long .L5 ... .align 4 aligns the following data on the next 4-byte boundary which ensures that fetching these memory locations is efficient, right? I think this is done because there might be things happening before the switch statement which caused misalignment. But why are there actually two calls to .align? Are there any rules of thumb when to call .align or should it simply be done whenever a new block of data is stored in memory and something prior to this could have caused misalignment? In case of arrays, it seems that alignment is done on 32-byte boundaries as soon as the array occupies at least 32 byte. Is it more efficient to do it this way or is there another reason for the 32-byte boundary? I'd appreciate any explanation or hint on literature.

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  • C++ method chaining including class constructor

    - by jena
    Hello, I'm trying to implement method chaining in C++, which turns out to be quite easy if the constructor call of a class is a separate statement, e.g: Foo foo; foo.bar().baz(); But as soon as the constructor call becomes part of the method chain, the compiler complains about expecting ";" in place of "." immediately after the constructor call: Foo foo().bar().baz(); I'm wondering now if this is actually possible in C++. Here is my test class: class Foo { public: Foo() { } Foo& bar() { return *this; } Foo& baz() { return *this; } }; I also found an example for "fluent interfaces" in C++ (http://en.wikipedia.org/wiki/Fluent_interface#C.2B.2B) which seems to be exactly what I'm searching for. However, I get the same compiler error for that code. Thanks in advance for any hint. Best, Jean

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